BLASTX nr result

ID: Ophiopogon26_contig00020250 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00020250
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276953.1| pre-mRNA-processing protein 40A isoform X4 [...    66   7e-10
ref|XP_020276952.1| pre-mRNA-processing protein 40A isoform X3 [...    66   7e-10
ref|XP_020276951.1| pre-mRNA-processing protein 40A isoform X2 [...    66   7e-10
ref|XP_020276950.1| pre-mRNA-processing protein 40A isoform X1 [...    66   7e-10
gb|ONK58883.1| uncharacterized protein A4U43_C08F710 [Asparagus ...    66   8e-10

>ref|XP_020276953.1| pre-mRNA-processing protein 40A isoform X4 [Asparagus officinalis]
          Length = 782

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 57/130 (43%), Positives = 62/130 (47%)
 Frame = -2

Query: 395 REQAEKVAARPTVTETPAASAVTVPSNDSVDTHTSLATTNSMTPTAVSMVASSPLPVTGA 216
           REQAEK AA+  VT+T A          S DT TSLAT N  TP   S VASSP+PVT A
Sbjct: 41  REQAEKEAAQLNVTQTAA----------SADTATSLATANVGTPKVTSAVASSPVPVTAA 90

Query: 215 SPANPQNMXXXXXXXXXXXXXXXXXXXGFSGTVDAVGVXXXXXXXXXXXXXXXSANMGVN 36
           S   PQN+                     SGT D VGV               SA+ GV 
Sbjct: 91  SAVIPQNVTASGSPPSINIPSVTASSVT-SGTTD-VGV---SLGTPSTPSLPVSASNGVL 145

Query: 35  SVAMDATTTA 6
           SV MDATTTA
Sbjct: 146 SVEMDATTTA 155


>ref|XP_020276952.1| pre-mRNA-processing protein 40A isoform X3 [Asparagus officinalis]
          Length = 789

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 57/130 (43%), Positives = 62/130 (47%)
 Frame = -2

Query: 395 REQAEKVAARPTVTETPAASAVTVPSNDSVDTHTSLATTNSMTPTAVSMVASSPLPVTGA 216
           REQAEK AA+  VT+T A          S DT TSLAT N  TP   S VASSP+PVT A
Sbjct: 48  REQAEKEAAQLNVTQTAA----------SADTATSLATANVGTPKVTSAVASSPVPVTAA 97

Query: 215 SPANPQNMXXXXXXXXXXXXXXXXXXXGFSGTVDAVGVXXXXXXXXXXXXXXXSANMGVN 36
           S   PQN+                     SGT D VGV               SA+ GV 
Sbjct: 98  SAVIPQNVTASGSPPSINIPSVTASSVT-SGTTD-VGV---SLGTPSTPSLPVSASNGVL 152

Query: 35  SVAMDATTTA 6
           SV MDATTTA
Sbjct: 153 SVEMDATTTA 162


>ref|XP_020276951.1| pre-mRNA-processing protein 40A isoform X2 [Asparagus officinalis]
          Length = 796

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 57/130 (43%), Positives = 62/130 (47%)
 Frame = -2

Query: 395 REQAEKVAARPTVTETPAASAVTVPSNDSVDTHTSLATTNSMTPTAVSMVASSPLPVTGA 216
           REQAEK AA+  VT+T A          S DT TSLAT N  TP   S VASSP+PVT A
Sbjct: 55  REQAEKEAAQLNVTQTAA----------SADTATSLATANVGTPKVTSAVASSPVPVTAA 104

Query: 215 SPANPQNMXXXXXXXXXXXXXXXXXXXGFSGTVDAVGVXXXXXXXXXXXXXXXSANMGVN 36
           S   PQN+                     SGT D VGV               SA+ GV 
Sbjct: 105 SAVIPQNVTASGSPPSINIPSVTASSVT-SGTTD-VGV---SLGTPSTPSLPVSASNGVL 159

Query: 35  SVAMDATTTA 6
           SV MDATTTA
Sbjct: 160 SVEMDATTTA 169


>ref|XP_020276950.1| pre-mRNA-processing protein 40A isoform X1 [Asparagus officinalis]
          Length = 1004

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 57/130 (43%), Positives = 62/130 (47%)
 Frame = -2

Query: 395 REQAEKVAARPTVTETPAASAVTVPSNDSVDTHTSLATTNSMTPTAVSMVASSPLPVTGA 216
           REQAEK AA+  VT+T A          S DT TSLAT N  TP   S VASSP+PVT A
Sbjct: 263 REQAEKEAAQLNVTQTAA----------SADTATSLATANVGTPKVTSAVASSPVPVTAA 312

Query: 215 SPANPQNMXXXXXXXXXXXXXXXXXXXGFSGTVDAVGVXXXXXXXXXXXXXXXSANMGVN 36
           S   PQN+                     SGT D VGV               SA+ GV 
Sbjct: 313 SAVIPQNVTASGSPPSINIPSVTASSVT-SGTTD-VGV---SLGTPSTPSLPVSASNGVL 367

Query: 35  SVAMDATTTA 6
           SV MDATTTA
Sbjct: 368 SVEMDATTTA 377


>gb|ONK58883.1| uncharacterized protein A4U43_C08F710 [Asparagus officinalis]
          Length = 1197

 Score = 65.9 bits (159), Expect = 8e-10
 Identities = 57/130 (43%), Positives = 62/130 (47%)
 Frame = -2

Query: 395 REQAEKVAARPTVTETPAASAVTVPSNDSVDTHTSLATTNSMTPTAVSMVASSPLPVTGA 216
           REQAEK AA+  VT+T A          S DT TSLAT N  TP   S VASSP+PVT A
Sbjct: 263 REQAEKEAAQLNVTQTAA----------SADTATSLATANVGTPKVTSAVASSPVPVTAA 312

Query: 215 SPANPQNMXXXXXXXXXXXXXXXXXXXGFSGTVDAVGVXXXXXXXXXXXXXXXSANMGVN 36
           S   PQN+                     SGT D VGV               SA+ GV 
Sbjct: 313 SAVIPQNVTASGSPPSINIPSVTASSVT-SGTTD-VGV---SLGTPSTPSLPVSASNGVL 367

Query: 35  SVAMDATTTA 6
           SV MDATTTA
Sbjct: 368 SVEMDATTTA 377


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