BLASTX nr result

ID: Ophiopogon26_contig00019910 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019910
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008787747.1| PREDICTED: cyclin-T1-3-like [Phoenix dactyli...    55   6e-11
ref|XP_020256293.1| cyclin-T1-3-like isoform X2 [Asparagus offic...    64   2e-09
ref|XP_020256292.1| cyclin-T1-3-like isoform X1 [Asparagus offic...    64   2e-09
ref|XP_010941989.1| PREDICTED: cyclin-T1-3-like [Elaeis guineensis]    45   1e-08
ref|XP_008787243.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-3-...    41   2e-07

>ref|XP_008787747.1| PREDICTED: cyclin-T1-3-like [Phoenix dactylifera]
          Length = 602

 Score = 55.1 bits (131), Expect(2) = 6e-11
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
 Frame = +3

Query: 3   NGPQRFPQSERNDHEGKDSRYG----KMESGSKDRLHHEPGNVAKGLTNK----SERAIE 158
           NG QR PQ E  +H   + R G    K+E G KD  H E GNVA+ + ++    SE ++E
Sbjct: 342 NGTQRVPQHESKNHGNYEQRSGFYDNKVEPGLKDHWHPESGNVAEAMNSRSNYGSECSLE 401

Query: 159 E-----PGEISQSRDRSSGHSDGPKKLLSVGCYKK 248
           E      G  +Q++DR+ G ++GPK    +   KK
Sbjct: 402 ESVMPVTGGSTQTKDRNIGGNEGPKVCSPLDAIKK 436



 Score = 39.7 bits (91), Expect(2) = 6e-11
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = +1

Query: 319 LDVMDDDDLIERELESGIELAAED 390
           +D+ D+DDLIERELE G+ELA ED
Sbjct: 460 VDLTDEDDLIERELEHGVELAVED 483


>ref|XP_020256293.1| cyclin-T1-3-like isoform X2 [Asparagus officinalis]
 gb|ONK74510.1| uncharacterized protein A4U43_C03F7120 [Asparagus officinalis]
          Length = 532

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 35/82 (42%), Positives = 47/82 (57%)
 Frame = +3

Query: 3   NGPQRFPQSERNDHEGKDSRYGKMESGSKDRLHHEPGNVAKGLTNKSERAIEEPGEISQS 182
           N  QR  Q+ERNDH+ ++S         KDR H EPGN ++G        IE+P E +QS
Sbjct: 325 NPTQRLSQNERNDHDSRES---------KDRHHFEPGNASEG-------PIEDPVETNQS 368

Query: 183 RDRSSGHSDGPKKLLSVGCYKK 248
           R++S GH+DGPK    +   KK
Sbjct: 369 REKSLGHNDGPKSYSPLDAIKK 390


>ref|XP_020256292.1| cyclin-T1-3-like isoform X1 [Asparagus officinalis]
          Length = 533

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 35/82 (42%), Positives = 47/82 (57%)
 Frame = +3

Query: 3   NGPQRFPQSERNDHEGKDSRYGKMESGSKDRLHHEPGNVAKGLTNKSERAIEEPGEISQS 182
           N  QR  Q+ERNDH+ ++S         KDR H EPGN ++G        IE+P E +QS
Sbjct: 325 NPTQRLSQNERNDHDSRES---------KDRHHFEPGNASEG-------PIEDPVETNQS 368

Query: 183 RDRSSGHSDGPKKLLSVGCYKK 248
           R++S GH+DGPK    +   KK
Sbjct: 369 REKSLGHNDGPKSYSPLDAIKK 390


>ref|XP_010941989.1| PREDICTED: cyclin-T1-3-like [Elaeis guineensis]
          Length = 607

 Score = 44.7 bits (104), Expect(2) = 1e-08
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
 Frame = +3

Query: 3   NGPQRFPQSERNDHEGKDSRYG----KMESGSKDRLHHEPGNVAKGLTNK----SERAIE 158
           NGPQR  Q++  DH     R G    KME G  D  +H+  N+A+   ++    SER +E
Sbjct: 347 NGPQRVSQNDSKDHRNNKQRSGLHDHKMEPGPMDHRYHDSANMAEAGNSRANYGSERPVE 406

Query: 159 E-----PGEISQSRDRSSGHSDGPK 218
           E         ++++D     S+GPK
Sbjct: 407 ESMMSVTSGTTETKDGKFTGSEGPK 431



 Score = 42.4 bits (98), Expect(2) = 1e-08
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = +1

Query: 319 LDVMDDDDLIERELESGIELAAED 390
           +D+MD+DDLIERELE G+ELA ED
Sbjct: 465 MDLMDEDDLIERELEHGVELAVED 488


>ref|XP_008787243.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-3-like [Phoenix
           dactylifera]
          Length = 584

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = +3

Query: 3   NGPQRFPQSERNDHEGKDSRYG----KMESGSKDRLHHEPGNVAKGLTNKSERAIEEPGE 170
           NG QR  Q++  DH     R G    KME G  D  +HE GN+A+   +++    E P  
Sbjct: 349 NGAQRVLQNDIKDHRNNKQRSGLHDHKMEPGLVDHRYHESGNMAEAGNSRANYGSERP-- 406

Query: 171 ISQSRDRSSGHSDGPK 218
           + +S    +G S+GPK
Sbjct: 407 VEESMLPVTG-SEGPK 421



 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = +1

Query: 319 LDVMDDDDLIERELESGIELAAED 390
           +D+ D+DDLIERELE G+ELAAED
Sbjct: 455 VDLTDEDDLIERELEHGVELAAED 478


Top