BLASTX nr result

ID: Ophiopogon26_contig00019719 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019719
         (616 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256502.1| putative F-box/LRR-repeat protein At5g54820 ...    48   8e-06
gb|ONK74716.1| uncharacterized protein A4U43_C03F9410 [Asparagus...    48   9e-06

>ref|XP_020256502.1| putative F-box/LRR-repeat protein At5g54820 [Asparagus officinalis]
          Length = 507

 Score = 47.8 bits (112), Expect(3) = 8e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)
 Frame = +3

Query: 249 ERATVLESLFMVAPPTPDSDKNMDIKITNSISDTMSNETIDLVSLHRHISMFTVTSPGAK 428
           ++A +LE L +VAP   D +K  D + TNS S   +NE +   SL   +SM    SP   
Sbjct: 408 QKAVILEYLVIVAPSI-DLEKGADAESTNSSSQCKNNEIMGSQSLRDKLSMLPKASPNVN 466

Query: 429 MVLWEYLEYDSSFD 470
           ++L +++E D+ F+
Sbjct: 467 IILCDFMEDDTGFN 480



 Score = 27.7 bits (60), Expect(3) = 8e-06
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 184 VIKMNKFAGRKS*MRLVKFLLER 252
           V+K+N F G  + M LVKFLL++
Sbjct: 387 VVKLNNFRGSNTEMILVKFLLQK 409



 Score = 21.2 bits (43), Expect(3) = 8e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 152 PTDVVFHHLKV 184
           P D+ F+HLKV
Sbjct: 377 PQDITFNHLKV 387


>gb|ONK74716.1| uncharacterized protein A4U43_C03F9410 [Asparagus officinalis]
          Length = 277

 Score = 47.8 bits (112), Expect(3) = 9e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)
 Frame = +3

Query: 249 ERATVLESLFMVAPPTPDSDKNMDIKITNSISDTMSNETIDLVSLHRHISMFTVTSPGAK 428
           ++A +LE L +VAP   D +K  D + TNS S   +NE +   SL   +SM    SP   
Sbjct: 178 QKAVILEYLVIVAPSI-DLEKGADAESTNSSSQCKNNEIMGSQSLRDKLSMLPKASPNVN 236

Query: 429 MVLWEYLEYDSSFD 470
           ++L +++E D+ F+
Sbjct: 237 IILCDFMEDDTGFN 250



 Score = 27.7 bits (60), Expect(3) = 9e-06
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 184 VIKMNKFAGRKS*MRLVKFLLER 252
           V+K+N F G  + M LVKFLL++
Sbjct: 157 VVKLNNFRGSNTEMILVKFLLQK 179



 Score = 21.2 bits (43), Expect(3) = 9e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 152 PTDVVFHHLKV 184
           P D+ F+HLKV
Sbjct: 147 PQDITFNHLKV 157


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