BLASTX nr result

ID: Ophiopogon26_contig00019536 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019536
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777433.1| PREDICTED: NF-kappa-B-activating protein [Ph...    54   1e-05

>ref|XP_008777433.1| PREDICTED: NF-kappa-B-activating protein [Phoenix dactylifera]
          Length = 499

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 28/66 (42%), Positives = 33/66 (50%)
 Frame = -3

Query: 291 SNNNNKPWXXXXXXXXXXXELKGLTYFEYXXXXXXXXXXXXKNCIWRVTPSPPRADRDQS 112
           S N   P            +LKGL+YFEY            KNCIWRVTPSPPR +RD S
Sbjct: 85  SRNGKPPSLGDGDSSSDDEDLKGLSYFEYRRLKRQKLRKKLKNCIWRVTPSPPRGERDPS 144

Query: 111 DDDEPP 94
           +  + P
Sbjct: 145 EPLDGP 150


Top