BLASTX nr result

ID: Ophiopogon26_contig00019467 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019467
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_083757373.1| hypothetical protein [Psychrobacter sp. PRwf-1]    59   5e-07
dbj|BAI64708.1| uncharacterized protein containing LysM domain [...    59   2e-06

>ref|WP_083757373.1| hypothetical protein [Psychrobacter sp. PRwf-1]
          Length = 163

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
 Frame = +3

Query: 534 VRSFGIWSWGCFSVRSFGIWSWCC--FSVRSFGIWSWC--CFSIRSFGIWCWG--CFSVR 695
           V S  ++S   FS+ SF IWS+    FS+R F IW +   CFSI  F IWC+   CFS+R
Sbjct: 26  VFSIRVFSIRVFSIWSFSIWSFSIRGFSIRGFSIWGFSIWCFSIWCFSIWCFSIWCFSIR 85

Query: 696 SFCIW 710
            F IW
Sbjct: 86  GFSIW 90



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 14/71 (19%)
 Frame = +3

Query: 540 SFGIWSWGC--FSVRSFGIWSWC--CFSVRSFGIW--SWCCFSIRSFGIW--------CW 677
           SF IWS+    FS+R F IW +   CFS+  F IW  S  CFSIR F IW         W
Sbjct: 41  SFSIWSFSIRGFSIRGFSIWGFSIWCFSIWCFSIWCFSIWCFSIRGFSIWGFSIRGFSIW 100

Query: 678 GCFSVRSFCIW 710
           G FS+R F IW
Sbjct: 101 G-FSIRGFSIW 110



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
 Frame = +3

Query: 552 WSW-GCFSVRSFGI--WSWCCFSVRSFGIWSWCC--FSIRSFGIWCWG--CFSVRSFCIW 710
           W+W  CFS+R F I  +S   FS+ SF IWS+    FSIR F IW +   CFS+  F IW
Sbjct: 16  WNWLWCFSIRVFSIRVFSIRVFSIWSFSIWSFSIRGFSIRGFSIWGFSIWCFSIWCFSIW 75

Query: 711 CWG--CFSV 731
           C+   CFS+
Sbjct: 76  CFSIWCFSI 84


>dbj|BAI64708.1| uncharacterized protein containing LysM domain [Rothia mucilaginosa
           DY-18]
          Length = 579

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +3

Query: 534 VRSFGIWS---WGCFSVRSFGIWSWCCFSVRSFGIWSWCCFSIRSFGIWCWGCFSVRSFC 704
           +R FG  S   +GC S+R FG  S  CFS+R F + S+ C S+ S  + C+ C S+RSF 
Sbjct: 421 LRCFGCLSLRCFGCLSLRCFGCLSLRCFSLRCFSLRSFGCLSLGSISLRCFSCLSLRSFS 480

Query: 705 IWCWGCFSV 731
           +  +GC S+
Sbjct: 481 LRSFGCLSL 489


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