BLASTX nr result

ID: Ophiopogon26_contig00019398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019398
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273391.1| protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 ...    87   2e-17
ref|XP_008784822.1| PREDICTED: LOW QUALITY PROTEIN: protein PLAS...    68   1e-10
ref|XP_019704501.1| PREDICTED: protein PLASTID TRANSCRIPTIONALLY...    59   1e-07
gb|PKA57002.1| hypothetical protein AXF42_Ash002306 [Apostasia s...    58   3e-07

>ref|XP_020273391.1| protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 [Asparagus officinalis]
 gb|ONK65180.1| uncharacterized protein A4U43_C07F34510 [Asparagus officinalis]
          Length = 536

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +3

Query: 78  MVAFANSLLFQDVFGGALVPCAGVRFGKSSYQKYRSQFLGVFYPIKVQYLFGQKRCPESN 257
           M A AN+LLFQD  GGAL+    VR G SSY KY+SQF GV  P+KV++LFGQKR     
Sbjct: 1   MAACANALLFQDSLGGALLSAKDVRTGNSSYLKYQSQFRGVCCPVKVKFLFGQKRDYPRQ 60

Query: 258 EELFHCIKCVKKDG-QFDXXXXXXXXXXXXMDSTS 359
           +E    IKC+ KDG QFD            MDSTS
Sbjct: 61  KEPSRHIKCMNKDGRQFDPSSVEQPPYHSYMDSTS 95


>ref|XP_008784822.1| PREDICTED: LOW QUALITY PROTEIN: protein PLASTID TRANSCRIPTIONALLY
           ACTIVE 12 [Phoenix dactylifera]
          Length = 530

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 34/94 (36%), Positives = 50/94 (53%)
 Frame = +3

Query: 78  MVAFANSLLFQDVFGGALVPCAGVRFGKSSYQKYRSQFLGVFYPIKVQYLFGQKRCPESN 257
           M +F+N+ LFQ+   G L   +G   GKS  QK+++ F+GVF+  K++ L    R  +  
Sbjct: 1   MTSFSNAFLFQEGSMGGLAAASGALIGKSHSQKFQTPFVGVFHSSKLRILVRSYRYSQRK 60

Query: 258 EELFHCIKCVKKDGQFDXXXXXXXXXXXXMDSTS 359
             L  CI+C +KDG+FD             DSTS
Sbjct: 61  SRLLPCIRCARKDGKFDPSSIEPPPYHCYFDSTS 94


>ref|XP_019704501.1| PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 [Elaeis
           guineensis]
          Length = 527

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 34/94 (36%), Positives = 48/94 (51%)
 Frame = +3

Query: 78  MVAFANSLLFQDVFGGALVPCAGVRFGKSSYQKYRSQFLGVFYPIKVQYLFGQKRCPESN 257
           M +F+N+ LFQD F G L   +G   GKS  QK+++ F+G+F   K+Q      R  +  
Sbjct: 1   MTSFSNAFLFQDGFTGGLAAASGALAGKSRSQKFQTPFVGIFPSGKLQN--PTDRYSQRK 58

Query: 258 EELFHCIKCVKKDGQFDXXXXXXXXXXXXMDSTS 359
             L   I+C +KDG+FD             DSTS
Sbjct: 59  AGLLPSIRCARKDGKFDPSSIEPPPYHSYFDSTS 92


>gb|PKA57002.1| hypothetical protein AXF42_Ash002306 [Apostasia shenzhenica]
          Length = 560

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
 Frame = +3

Query: 78  MVAFANSLLFQDVFGGALVPCAGVRF--GKSSYQKYRSQFLGVFYPIKVQYLFGQKRCPE 251
           M A +N LLF D  G  L P +  +    K   QK++S FLG F P K+  L   ++C +
Sbjct: 1   MAALSNLLLFGD--GARLNPVSARKDLNKKPLSQKFQSGFLGGFQPTKLHVLIKWRKCSQ 58

Query: 252 SNEELFHCIKCVKKDGQFDXXXXXXXXXXXXMDSTS 359
              E F  +KCV+KDG+FD            MDSTS
Sbjct: 59  IYAERFPSVKCVRKDGKFDPSSIEPPPYYIYMDSTS 94


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