BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019283
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis] ...    91   2e-18
ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]               67   4e-10
gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]                    67   4e-10
ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dact...    65   1e-09
ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [E...    64   2e-09
ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [E...    64   4e-09
ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [E...    64   4e-09
gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenz...    63   8e-09
ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guine...    62   3e-08
ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus] >gi|...    57   1e-06
ref|XP_020683594.1| protein RRP6-like 2 [Dendrobium catenatum] >...    56   2e-06

>ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis]
 gb|ONK68872.1| uncharacterized protein A4U43_C05F16920 [Asparagus officinalis]
          Length = 906

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 45/66 (68%), Positives = 51/66 (77%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHDGDGGLDSNPLDSGEKRRGSAMGRSNGEGRERGLRRQAFPPSGN 234
            YAAAR+ I F GV EH  D  LD+NP +S EKR+GS  GRS+GE R RGLRRQAFP SGN
Sbjct: 841  YAAARRNIEFGGVEEHFKDAELDNNPSESTEKRKGSDKGRSSGEERVRGLRRQAFPASGN 900

Query: 233  RSTTYK 216
            RST+YK
Sbjct: 901  RSTSYK 906


>ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]
          Length = 921

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 10/75 (13%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHDG------DGGLDSNPLDSGEKRRGSAMGRSNGEGR----ERGL 264
            YAAARK I F  +GE+DG      D G+ ++   +G+KR+G+ +GR  GE +    ++  
Sbjct: 846  YAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRKGAPVGRGRGEEKGKSSQQPR 905

Query: 263  RRQAFPPSGNRSTTY 219
            RRQAFP SGNRSTTY
Sbjct: 906  RRQAFPLSGNRSTTY 920


>gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]
          Length = 937

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 10/75 (13%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHDG------DGGLDSNPLDSGEKRRGSAMGRSNGEGR----ERGL 264
            YAAARK I F  +GE+DG      D G+ ++   +G+KR+G+ +GR  GE +    ++  
Sbjct: 862  YAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRKGAPVGRGRGEEKGKSSQQPR 921

Query: 263  RRQAFPPSGNRSTTY 219
            RRQAFP SGNRSTTY
Sbjct: 922  RRQAFPLSGNRSTTY 936


>ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dactylifera]
          Length = 945

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 39/70 (55%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHDGDGGLDSNPL--DSGEKRRGSAMGRSNGE---GRERGLRRQAF 249
            YAAARK +    VGE D     D  P   DSGE R+GS  G+S GE   G +   RRQAF
Sbjct: 875  YAAARKNMKVGEVGEKDRAESDDRLPTLPDSGELRKGSMFGQSRGEEVKGLQHPRRRQAF 934

Query: 248  PPSGNRSTTY 219
            PPSGNRSTTY
Sbjct: 935  PPSGNRSTTY 944


>ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
          Length = 331

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
 Frame = -1

Query: 413 YAAARKKINFAGVGEHD---GDGGLDSNPLDSGEKRRGSAMGRSNGEGRERGL----RRQ 255
           YAAARK + F  VGE D    D  L ++ + SGE  +G A G+S GE + +G     RRQ
Sbjct: 260 YAAARKNMKFGEVGEKDIAESDNRLQTSSV-SGEMHKGLASGQSRGEEKVKGFQHPRRRQ 318

Query: 254 AFPPSGNRSTTY 219
           AFPPSGNRSTTY
Sbjct: 319 AFPPSGNRSTTY 330


>ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
          Length = 946

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 39/72 (54%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHD---GDGGLDSNPLDSGEKRRGSAMGRSNGEGRERGL----RRQ 255
            YAAARK I F  V E D   G+ GL + P DS E  +G   G+S G+ R +G     RRQ
Sbjct: 875  YAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVFGQSGGKERLKGFQQSRRRQ 933

Query: 254  AFPPSGNRSTTY 219
            AFPPSGNRSTTY
Sbjct: 934  AFPPSGNRSTTY 945


>ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [Elaeis guineensis]
          Length = 954

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 39/72 (54%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHD---GDGGLDSNPLDSGEKRRGSAMGRSNGEGRERGL----RRQ 255
            YAAARK I F  V E D   G+ GL + P DS E  +G   G+S G+ R +G     RRQ
Sbjct: 883  YAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVFGQSGGKERLKGFQQSRRRQ 941

Query: 254  AFPPSGNRSTTY 219
            AFPPSGNRSTTY
Sbjct: 942  AFPPSGNRSTTY 953


>gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenzhenica]
          Length = 891

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHDG--DGGLDSNPLDSGEKRRGSAMGRSNGEGRERG---LRRQAF 249
            Y AARK + F   GE DG  DG    +   S    +G+   +SNGE  ERG   LRRQAF
Sbjct: 820  YTAARKTVKFGEDGEEDGGEDGESRMDLSKSRGPSKGAVSSKSNGERLERGRQPLRRQAF 879

Query: 248  PPSGNRSTTYK 216
            PPSGNRSTTY+
Sbjct: 880  PPSGNRSTTYR 890


>ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guineensis]
          Length = 946

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
 Frame = -1

Query: 413  YAAARKKINFAGVGEHD---GDGGLDSNPLDSGEKRRGSAMGRSNGEGRERGL----RRQ 255
            YAAARK + F  VG  D    D  L ++ + SGE  +G A G+S GE + +G     RRQ
Sbjct: 875  YAAARKNMKFGEVGGKDIAESDNRLQTSSV-SGETHKGLASGQSRGEEKVKGFQHPRRRQ 933

Query: 254  AFPPSGNRSTTY 219
            AFPPSGNRSTTY
Sbjct: 934  AFPPSGNRSTTY 945


>ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus]
 gb|OTG20808.1| hypothetical protein HannXRQ_Chr07g0197171 [Helianthus annuus]
          Length = 887

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
 Frame = -1

Query: 413  YAAARKKINFA--GVGEHDGDGGLDSNPLDSGEKRRGSAMGRSNGEGRER------GLRR 258
            YAAARK+  F   G G+ DGDGG        G K+ G   GR    G ER      G RR
Sbjct: 816  YAAARKEGRFGEEGSGDEDGDGGKSKG--KGGRKKAGGGGGRKESAGGERSGDFQMGRRR 873

Query: 257  QAFPPSGNRSTTYK 216
            QAFP +GNRS+T++
Sbjct: 874  QAFPATGNRSSTFR 887


>ref|XP_020683594.1| protein RRP6-like 2 [Dendrobium catenatum]
 gb|PKU75722.1| exosome complex exonuclease RRP6 [Dendrobium catenatum]
          Length = 867

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
 Frame = -1

Query: 413  YAAARKKINFAGV--GEHDGDGGLDSN--PLDSGEKRRGSAMGRSNGEGRERGL-----R 261
            Y+ ARK + F     GE DG GG+     P   G K  G    R+NGE RER       R
Sbjct: 793  YSTARKTMQFGEEIGGEDDGGGGMIDGVRPASRGAKE-GFLSSRNNGERRERERGNQPRR 851

Query: 260  RQAFPPSGNRSTTYK 216
            RQAFPPSGNRSTTY+
Sbjct: 852  RQAFPPSGNRSTTYR 866