BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019280
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   205   4e-59
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   205   4e-59
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso...   200   3e-57
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso...   200   3e-57
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...   199   9e-57
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...   198   2e-56
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De...   197   2e-56
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   197   2e-56
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...   197   4e-56
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...   197   4e-56
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su...   197   4e-56
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An...   195   2e-55
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   188   2e-53
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su...   188   4e-53
ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II su...   188   5e-53
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo...   188   5e-53
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi...   188   6e-53
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se...   187   8e-53
gb|PAN33683.1| hypothetical protein PAHAL_F01021 [Panicum hallii]     187   1e-52
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...   187   1e-52

>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  205 bits (522), Expect = 4e-59
 Identities = 104/119 (87%), Positives = 104/119 (87%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EPVKKSRGGCGAQQPNI
Sbjct: 39  RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNI 98

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 99  TIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 157


>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  205 bits (522), Expect = 4e-59
 Identities = 104/119 (87%), Positives = 104/119 (87%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EPVKKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 180 TIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 238


>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  200 bits (509), Expect = 3e-57
 Identities = 102/119 (85%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EPVKKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 TIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238


>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  200 bits (509), Expect = 3e-57
 Identities = 102/119 (85%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EPVKKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 TIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score =  199 bits (505), Expect = 9e-57
 Identities = 100/119 (84%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRL+RIYDACKSKKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 TIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPK 238


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score =  198 bits (503), Expect = 2e-56
 Identities = 99/119 (83%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPK+RLKRIYDACK+KKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPK 238


>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
          Length = 1841

 Score =  197 bits (502), Expect = 2e-56
 Identities = 99/119 (83%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 180 TVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPK 238


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  197 bits (502), Expect = 2e-56
 Identities = 99/119 (83%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 182 RFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNI 241

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPK
Sbjct: 242 TVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPK 300


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
           guineensis]
          Length = 1842

 Score =  197 bits (500), Expect = 4e-56
 Identities = 98/119 (82%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPK+RLKRIYDACK+KKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PK
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPK 238


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
           dactylifera]
          Length = 1842

 Score =  197 bits (500), Expect = 4e-56
 Identities = 98/119 (82%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPK+RLKRIYDACK+KKKCA              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PK
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPK 238


>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1832

 Score =  197 bits (500), Expect = 4e-56
 Identities = 99/119 (83%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKKKC+              EP+KKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGLNPK
Sbjct: 180 TIDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPK 238


>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
 gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
          Length = 1854

 Score =  195 bits (495), Expect = 2e-55
 Identities = 98/119 (82%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPKNRLKRIYDACKSKK+CA              EPVKKSRGGCGAQQPNI
Sbjct: 120 RFKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 180 TVDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 238


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  188 bits (477), Expect = 2e-53
 Identities = 96/119 (80%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 51  KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNI 109

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 110 TVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 168


>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
           guineensis]
          Length = 1842

 Score =  188 bits (478), Expect = 4e-53
 Identities = 94/119 (78%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           RFKQALKIRNPK+RLKRI DACKSKKKCA              EP+KKSRGGCG+QQP I
Sbjct: 120 RFKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTI 179

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           TIDGMKMVAEYKAPKKKSDD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+
Sbjct: 180 TIDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQ 238


>ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza sativa
           Japonica Group]
          Length = 1855

 Score =  188 bits (477), Expect = 5e-53
 Identities = 96/119 (80%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 120 KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNI 178

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 179 TVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237


>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
          Length = 1526

 Score =  188 bits (477), Expect = 5e-53
 Identities = 96/119 (80%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 106 KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNI 164

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 165 TVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 223


>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
          Length = 1449

 Score =  188 bits (477), Expect = 6e-53
 Identities = 96/119 (80%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 90  KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNI 148

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 149 TVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 207


>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
          Length = 860

 Score =  187 bits (474), Expect = 8e-53
 Identities = 95/119 (79%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 120 KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNI 178

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 179 TVDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237


>gb|PAN33683.1| hypothetical protein PAHAL_F01021 [Panicum hallii]
          Length = 1857

 Score =  187 bits (474), Expect = 1e-52
 Identities = 95/119 (79%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVKK RGGCGAQQPNI
Sbjct: 120 KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQDQHDTDEPVKK-RGGCGAQQPNI 178

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 179 TVDGMKMVAEFKAPKKKNDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza
           brachyantha]
          Length = 1855

 Score =  187 bits (474), Expect = 1e-52
 Identities = 95/119 (79%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   RFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXXEPVKKSRGGCGAQQPNI 180
           +FKQALKIRNPKNRLKRIYDACKSKK CA              EPVK+ RGGCGAQQPNI
Sbjct: 120 KFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNI 178

Query: 181 TIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 357
           T+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK
Sbjct: 179 TVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237