BLASTX nr result

ID: Ophiopogon26_contig00019178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00019178
         (502 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267547.1| zinc finger CCCH domain-containing protein 3...    69   1e-10
gb|OAP16590.1| hypothetical protein AXX17_AT1G16600 [Arabidopsis...    57   3e-06
gb|AAF82153.1|AC034256_17 Contains similarity to extensin (atExt...    57   3e-06
ref|XP_021419894.1| myosin-binding protein C, slow-type-like [On...    56   5e-06

>ref|XP_020267547.1| zinc finger CCCH domain-containing protein 30 [Asparagus
           officinalis]
 gb|ONK68019.1| uncharacterized protein A4U43_C05F6340 [Asparagus officinalis]
          Length = 500

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 59/169 (34%), Positives = 72/169 (42%), Gaps = 2/169 (1%)
 Frame = -1

Query: 502 IKILSDPVMVQRLLSEY--RAPKETPVPQSQSAVTIQTAGPSWPPPQPVVTAIVAPPSRP 329
           I ILSDPVMV+RL SEY    P++TP PQSQ  V+ Q A  S PP Q VV    AP    
Sbjct: 268 INILSDPVMVKRLASEYGDSQPQQTPPPQSQPVVSAQ-AAYSRPPIQSVVNTQAAPSRAT 326

Query: 328 PMQPVMTTNAAAPSRPPPQSVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHVFNMXX 149
            +QP ++ + A PS      V+T                             SHVF M  
Sbjct: 327 TLQPNVSKSPAIPSWSATPPVVT----------ATVAGPSRALPSQMSAPQSSHVFQM-- 374

Query: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXPTIKNVYYYKSLIQLHGGDKQE 2
                                      P +++  YYKSLIQLHGG+KQE
Sbjct: 375 ------PHRPPPPPPHILSTIAPVRAPPPVRDANYYKSLIQLHGGEKQE 417


>gb|OAP16590.1| hypothetical protein AXX17_AT1G16600 [Arabidopsis thaliana]
          Length = 810

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/62 (50%), Positives = 37/62 (59%)
 Frame = -1

Query: 445 PKETPVPQSQSAVTIQTAGPSWPPPQPVVTAIVAPPSRPPMQPVMTTNAAAPSRPPPQSV 266
           P   P P  Q  +T  TA P+ PPPQP +T ++AP S PP QP +T   AAP  PPPQ  
Sbjct: 164 PSPPPPPPPQPCITCVTA-PAPPPPQPCITCVIAPAS-PPPQPCITC-VAAPEPPPPQPC 220

Query: 265 IT 260
           IT
Sbjct: 221 IT 222


>gb|AAF82153.1|AC034256_17 Contains similarity to extensin (atExt1) from Arabidopsis thaliana
           gb|U43627 and is rich in proline and glycine. EST
           gb|Z37262 comes from this gene [Arabidopsis thaliana]
          Length = 1006

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/62 (50%), Positives = 37/62 (59%)
 Frame = -1

Query: 445 PKETPVPQSQSAVTIQTAGPSWPPPQPVVTAIVAPPSRPPMQPVMTTNAAAPSRPPPQSV 266
           P   P P  Q  +T  TA P+ PPPQP +T ++AP S PP QP +T   AAP  PPPQ  
Sbjct: 408 PSPPPPPPPQPCITCVTA-PAPPPPQPCITCVIAPAS-PPPQPCITC-VAAPEPPPPQPC 464

Query: 265 IT 260
           IT
Sbjct: 465 IT 466


>ref|XP_021419894.1| myosin-binding protein C, slow-type-like [Oncorhynchus mykiss]
          Length = 1282

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -1

Query: 445 PKETPVPQSQSAVTIQTAGPSWPPPQPVVTAIV-APPSRPPMQPVMTTNAAAPSRPPPQS 269
           P  +P PQ Q  VT+ T  P  PPP+PVVT +   PP  PP QPV+T     P  PP + 
Sbjct: 151 PPPSPPPQ-QPVVTVVTPPPPPPPPEPVVTGVTPPPPPPPPQQPVVTVVTPPPPPPPQEP 209

Query: 268 VIT 260
           V+T
Sbjct: 210 VVT 212



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 445 PKETPVPQSQSAVTIQTAGPSWPPP-QPVVTAIVAPPSRPPMQPVMTTNAAAPSRPPPQS 269
           P   P P  +  VT+ T  P  PPP QPVVT +  PP  PP +PV+T     P  PPPQ 
Sbjct: 133 PPPPPPPPQEPVVTVVTPPPPSPPPQQPVVTVVTPPPPPPPPEPVVTGVTPPPPPPPPQQ 192

Query: 268 VI 263
            +
Sbjct: 193 PV 194


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