BLASTX nr result
ID: Ophiopogon26_contig00019162
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00019162
(1354 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus dom... 86 3e-17
gb|PON66676.1| Ribonuclease H-like domain containing protein [Pa... 82 6e-15
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 70 1e-14
gb|PHT92770.1| hypothetical protein T459_00652 [Capsicum annuum] 73 3e-14
ref|XP_022975048.1| uncharacterized protein LOC111474005 [Cucurb... 79 3e-14
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 84 2e-13
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 71 3e-13
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 71 3e-13
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 70 5e-13
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 70 6e-13
emb|CDP17738.1| unnamed protein product [Coffea canephora] 82 1e-12
gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu... 81 1e-12
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 67 2e-12
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 67 2e-12
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 67 2e-12
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 67 2e-12
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 81 2e-12
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo... 67 2e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 70 3e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 70 5e-12
>ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus domestica]
Length = 863
Score = 85.9 bits (211), Expect(2) = 3e-17
Identities = 38/66 (57%), Positives = 47/66 (71%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L KVR M+S S K+ W EA+ Y CHIINRLPSAA +GK P EVW GK +SDY + +
Sbjct: 58 LLEKVRCMLSQSXLSKSFWXEAVNYACHIINRLPSAAXQGKTPMEVWXGKPSSDYDYIXI 117
Query: 1168 FGCPAH 1151
FG PA+
Sbjct: 118 FGSPAY 123
Score = 32.7 bits (73), Expect(2) = 3e-17
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNV-FDEASV*KHSS----SVQE------ESGQTGMISRQVEI 958
V GY+ W P+ +++++SR+V FDE + K S VQ+ SG + IS VE
Sbjct: 147 VKGYRLWCPEMKKLVISRDVTFDEEXMXKXSEKNVXDVQQVELEKVXSGTSNPISADVEX 206
Query: 957 DVSPRNSDXXXXXXXXXXXTQQGRTAVGKDT*FIQNQGQGQV 832
S D + + V +N+G+ Q+
Sbjct: 207 TTSEEVGDHEDVEEVELEDSIZVEXZVSPQESIAKNRGKRQI 248
>gb|PON66676.1| Ribonuclease H-like domain containing protein [Parasponia andersonii]
Length = 142
Score = 82.0 bits (201), Expect = 6e-15
Identities = 38/62 (61%), Positives = 45/62 (72%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L KVR ++S++ K W A+TY CH+INRLPS AIE K P EVWSGK ASDY SL V
Sbjct: 5 LLEKVRCVLSNARLGKVFWAGAITYACHLINRLPSTAIECKTPLEVWSGKPASDYDSLHV 64
Query: 1168 FG 1163
FG
Sbjct: 65 FG 66
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 69.7 bits (169), Expect(2) = 1e-14
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L + R M+S++G D+ W EA++ C++INR P I+ K P E+WSGK A+DY +L+
Sbjct: 581 LLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGK-AADYSNLKA 639
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 640 FGCTAY 645
Score = 40.4 bits (93), Expect(2) = 1e-14
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KHSSSVQEESGQTGMISRQVEIDVSPRNSD 934
V G++ W+P +R+I+SRNV + S + + +TG + +QVE V SD
Sbjct: 669 VKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEFQVIQNESD 725
>gb|PHT92770.1| hypothetical protein T459_00652 [Capsicum annuum]
Length = 645
Score = 73.2 bits (178), Expect(2) = 3e-14
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Frame = -1
Query: 1327 MMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRVFGCPAH- 1151
M+S++G K E + YVCHIINRLPSAAI GK PFE W GK+ DY SL VFG +
Sbjct: 1 MLSNTGLGKEFLVEEIIYVCHIINRLPSAAIGGKTPFENWYGKSTVDYDSLHVFGSTTYY 60
Query: 1150 ----EKTGP--KGFLFVGI 1112
K P K +F+GI
Sbjct: 61 HVKESKLNPRAKKAIFMGI 79
Score = 35.4 bits (80), Expect(2) = 3e-14
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNV-FDEASV*KHSSSVQEESGQTGMISRQVEID 955
V GY+ W P++R++I SR++ FDE+++ K E++ T +QVE +
Sbjct: 83 VKGYRLWCPETRKVIFSRDITFDESTMMK--KDADEDTKVTNSALKQVEFE 131
>ref|XP_022975048.1| uncharacterized protein LOC111474005 [Cucurbita maxima]
Length = 112
Score = 79.0 bits (193), Expect = 3e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
++ KVR ++S +G K W EAL+Y H++NRLP + G+ P EVWSG SDY L V
Sbjct: 5 LIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHV 64
Query: 1168 FGCPAH 1151
FGCPA+
Sbjct: 65 FGCPAY 70
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 84.0 bits (206), Expect = 2e-13
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L KVR M+S++G K W EA+ Y H+INRLPS+AI GK P E W GK A+DY SL V
Sbjct: 376 LLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPATDYDSLHV 435
Query: 1168 FGCPAH-----EKTGP--KGFLFVGI 1112
FGC A+ K P K +F+GI
Sbjct: 436 FGCTAYYHVKESKLDPRAKKAIFMGI 461
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 70.9 bits (172), Expect(2) = 3e-13
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R ++S++G K W EA++ C++INR PS AI+ K P EVWSG A +Y LRV
Sbjct: 810 IISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRV 868
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 869 FGCTAY 874
Score = 34.3 bits (77), Expect(2) = 3e-13
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVE 961
V GYK W P+++++++SRNV SV H S++V ES + + QVE
Sbjct: 898 VKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASV--QVE 946
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 70.9 bits (172), Expect(2) = 3e-13
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R ++S++G K W EA++ C++INR PS AI+ K P EVWSG A +Y LRV
Sbjct: 603 IISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRV 661
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 662 FGCTAY 667
Score = 34.3 bits (77), Expect(2) = 3e-13
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVE 961
V GYK W P+++++++SRNV SV H S++V ES + + QVE
Sbjct: 691 VKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASV--QVE 739
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 69.7 bits (169), Expect(2) = 5e-13
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++ K W EA++ C++INR PS AI+ K P EVWSG A +Y LRV
Sbjct: 512 IISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NYSDLRV 570
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 571 FGCTAY 576
Score = 34.7 bits (78), Expect(2) = 5e-13
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVE 961
V GYK W P+++++++SRNV S+ H S++V ES + +S QVE
Sbjct: 600 VKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVPVESQE--KVSVQVE 648
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 69.7 bits (169), Expect(2) = 6e-13
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++G K W EA++ C++INR P AI+ K P EVWSG + ++Y LRV
Sbjct: 575 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSG-SPTNYSDLRV 633
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 634 FGCTAY 639
Score = 34.3 bits (77), Expect(2) = 6e-13
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVE 961
V GYK W P+++++++SRNV SV H S++V ES + + QVE
Sbjct: 663 VKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV--QVE 711
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 81.6 bits (200), Expect = 1e-12
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
++ KVR M+S++G + W EA+TY H++NRLPS+AI GK P EVWSGK A+DY SLR+
Sbjct: 613 LVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDYDSLRI 672
Query: 1168 FGCPAH 1151
F A+
Sbjct: 673 FDSTAY 678
>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
Length = 499
Score = 80.9 bits (198), Expect = 1e-12
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L V+ +M+ SG ++ W EAL Y H++NRLP IEGK P E W G ASDY +L +
Sbjct: 367 LLENVQCIMTQSGLARSFWAEALVYASHLVNRLPCTVIEGKTPMEHWYGSVASDYETLWI 426
Query: 1168 FGCPAH-----EKTGPKG--FLFVGIKGC 1103
FGCPA+ K P+ +FVG + C
Sbjct: 427 FGCPAYFHVSNRKLNPRARKAIFVGFREC 455
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++ K W EA++ C++INR PS A + K P EVWSG A +Y LRV
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPA-NYSDLRV 696
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 697 FGCTAY 702
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVEIDVSPRNSD 934
V GYK W P+++++++SRNV SV H S++V ES + + QVE +S ++
Sbjct: 726 VKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV--QVEHLISSGHA- 782
Query: 933 XXXXXXXXXXXTQQGRTAVGKDT*FIQNQGQGQVRSST----AVWKPKESV 793
++ A+ +D I++ V+ S+ A KPK ++
Sbjct: 783 -----------PEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNI 822
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 67.4 bits (163), Expect(2) = 2e-12
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++ K W EA++ C++INR PS A + K P EVWSG A +Y LRV
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPA-NYSDLRV 696
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 697 FGCTAY 702
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMISRQVEIDVSPRNSD 934
V GYK W P+++++++SRNV SV H S++V ES + + QVE +S ++
Sbjct: 726 VKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASV--QVEHLISSGHA- 782
Query: 933 XXXXXXXXXXXTQQGRTAVGKDT*FIQNQGQGQVRSST----AVWKPKESV 793
++ A+ +D I++ V+ S+ A KPK ++
Sbjct: 783 -----------PEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNI 822
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 67.0 bits (162), Expect(2) = 2e-12
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++G K W A++ C++INR PS AI+ K P +VWSG A +Y LRV
Sbjct: 431 IISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPA-NYSDLRV 489
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 490 FGCTAY 495
Score = 35.4 bits (80), Expect(2) = 2e-12
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMI---SRQVEIDVSPR 943
V GYK W P+++++++SRNV SV H S++V ES + + R + D R
Sbjct: 519 VKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQFPKRSIAKDKPKR 578
Query: 942 NS 937
N+
Sbjct: 579 NT 580
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 67.0 bits (162), Expect(2) = 2e-12
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
I+ K R M+S++G K W A++ C++INR PS AI+ K P +VWSG A +Y LRV
Sbjct: 431 IISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPA-NYSDLRV 489
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 490 FGCTAY 495
Score = 35.4 bits (80), Expect(2) = 2e-12
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KH---SSSVQEESGQTGMI---SRQVEIDVSPR 943
V GYK W P+++++++SRNV SV H S++V ES + + R + D R
Sbjct: 519 VKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQFPKRSIAKDKPKR 578
Query: 942 NS 937
N+
Sbjct: 579 NT 580
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 80.9 bits (198), Expect = 2e-12
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = -1
Query: 1351 RILV-KVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSL 1175
+ILV KVR M+S++ + W EA+TY H++NRLPS+AI+GK P EVWSGK A+DY SL
Sbjct: 579 KILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSL 638
Query: 1174 RVFGCPAH 1151
VFG A+
Sbjct: 639 HVFGSIAY 646
>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 507
Score = 66.6 bits (161), Expect(2) = 2e-12
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L + R ++S++G ++ W EA++ C++INR PS I+ K P EVWS K A +Y LRV
Sbjct: 214 LLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCKTPIEVWSNKPA-NYSLLRV 272
Query: 1168 FGCPAH 1151
FGC A+
Sbjct: 273 FGCNAY 278
Score = 35.4 bits (80), Expect(2) = 2e-12
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVFDEASV*KHSSSVQEESGQTGMISRQVE 961
V GY+ W+P R++ILSR+V + S + S SG+ I +QVE
Sbjct: 302 VKGYRIWSPAERKVILSRDVIFDESHLFYPSLEFTVSGKNQKILKQVE 349
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.1 bits (170), Expect(2) = 3e-12
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L + R M+ ++G K+ W EA+ C++INR PS AI+ K P E+W GK DY SL V
Sbjct: 592 LLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPV-DYSSLHV 650
Query: 1168 FGCPAH 1151
FGCP +
Sbjct: 651 FGCPVY 656
Score = 31.6 bits (70), Expect(2) = 3e-12
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVF---DEASV*KHSSSVQEESGQTGMISRQVEIDVSPRNS 937
V GY+ W+P +R++++SR+V +E + + S +E+ M + E D S S
Sbjct: 683 VKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKESDSSEAES 741
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.1 bits (170), Expect(2) = 5e-12
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = -1
Query: 1348 ILVKVRYMMSSSGADKTLWTEALTYVCHIINRLPSAAIEGKIPFEVWSGKTASDYGSLRV 1169
+L + R M+ ++G K+ W EA+ C++INR PS AI+ K P E+W GK DY SL V
Sbjct: 592 LLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPV-DYSSLHV 650
Query: 1168 FGCPAH 1151
FGCP +
Sbjct: 651 FGCPVY 656
Score = 30.8 bits (68), Expect(2) = 5e-12
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 1104 VLGYKFWNPKSRRIILSRNVF---DEASV*KHSSSVQEESGQTGMISRQVEIDVS 949
V GY+ W+P +R++++SR+V +E + + S +E+ M + E D S
Sbjct: 683 VKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDSTSKETAIVQMEEKSKESDSS 737