BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00018875
         (1080 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   712   0.0  
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio...   710   0.0  
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic...   709   0.0  
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   702   0.0  
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy...   709   0.0  
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno...   709   0.0  
gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise...   695   0.0  
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse...   707   0.0  
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav...   705   0.0  
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum...   705   0.0  
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat...   705   0.0  
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se...   699   0.0  
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor...   704   0.0  
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus...   697   0.0  
gb|AAS79687.1| RNA polymerase II large subunit, partial [Ginkgo ...   701   0.0  
gb|AAQ08515.1| RNA polymerase II largest subunit, partial [Zea m...   699   0.0  
gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja o...   699   0.0  
gb|AAQ08513.1| RNA polymerase II largest subunit, partial [Pinus...   699   0.0  
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot...   698   0.0  
gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymph...   698   0.0  

>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  712 bits (1838), Expect = 0.0
 Identities = 348/359 (96%), Positives = 349/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTSARSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 152  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 211

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 212  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 271

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 272  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 331

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 332  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 391

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 392  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 451

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PAILKPRPLWTGKQV
Sbjct: 452  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPTPAILKPRPLWTGKQV 510


>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron tulipifera]
          Length = 1010

 Score =  710 bits (1833), Expect = 0.0
 Identities = 345/359 (96%), Positives = 350/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 151  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 211  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 271  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQV 509


>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
          Length = 1013

 Score =  709 bits (1831), Expect = 0.0
 Identities = 345/359 (96%), Positives = 350/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 154  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 214  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 512


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  702 bits (1811), Expect = 0.0
 Identities = 342/359 (95%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPK+ARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 163  LGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 222

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 223  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 282

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 283  GKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 342

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 343  KTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 402

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 403  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 462

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWWEDFDGKVPAPAILKPRP+WTGKQV
Sbjct: 463  PVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQV 521


>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
          Length = 1010

 Score =  709 bits (1830), Expect = 0.0
 Identities = 346/359 (96%), Positives = 350/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGL+PKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 151  LGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 211  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 271  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 509


>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
          Length = 1010

 Score =  709 bits (1830), Expect = 0.0
 Identities = 345/359 (96%), Positives = 349/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 151  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 211  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 271  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQV 509


>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
          Length = 652

 Score =  695 bits (1793), Expect = 0.0
 Identities = 339/359 (94%), Positives = 346/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENL++QE 
Sbjct: 232  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEH 291

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NG+ AHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 292  NGSAAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 351

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPG
Sbjct: 352  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPG 411

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIR+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 412  KTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 471

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 472  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 531

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV
Sbjct: 532  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 590


>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
          Length = 1009

 Score =  707 bits (1825), Expect = 0.0
 Identities = 344/359 (95%), Positives = 349/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QER
Sbjct: 150  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQER 209

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 210  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 269

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 270  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 329

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRY KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 330  KTGAKYIIREDGQRLDLRYSKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 389

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 390  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 449

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQV
Sbjct: 450  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 508


>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
          Length = 1010

 Score =  705 bits (1820), Expect = 0.0
 Identities = 345/359 (96%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTSARSEDDLTHQLAMIIRHNENLR+QER
Sbjct: 151  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 211  NGAPAHIILEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP G
Sbjct: 271  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQV 509


>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
          Length = 1009

 Score =  705 bits (1819), Expect = 0.0
 Identities = 341/359 (94%), Positives = 350/359 (97%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGL+PKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQE+
Sbjct: 150  LGLSPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQEK 209

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 210  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 269

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNI+RLKELVEYGPHPPPG
Sbjct: 270  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIDRLKELVEYGPHPPPG 329

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGH
Sbjct: 330  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGH 389

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 390  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 449

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKPRPLWTGKQV
Sbjct: 450  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQV 508


>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
          Length = 1010

 Score =  705 bits (1819), Expect = 0.0
 Identities = 343/359 (95%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LG NPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 151  LGFNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELP QPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 211  NGAPAHIISEFAQLLQFHIATYFDNELPXQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 271  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQV 509


>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
          Length = 860

 Score =  699 bits (1804), Expect = 0.0
 Identities = 339/359 (94%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPK+ARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 232  LGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 291

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 292  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 351

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 352  GKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 411

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRY+KKSSD HL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 412  KTGAKYIIREDGQRLDLRYVKKSSDQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 471

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 472  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 531

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWW+DFDGK+PAPAILKPRP+WTGKQV
Sbjct: 532  PVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQV 590


>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
          Length = 1013

 Score =  704 bits (1816), Expect = 0.0
 Identities = 339/359 (94%), Positives = 348/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQV+         SVMMDTS+RSEDDLTHQLAM+IRHNENL+RQE+
Sbjct: 154  LGLNPKYARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEK 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 214  NGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFV FNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVFFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 512


>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
          Length = 836

 Score =  697 bits (1799), Expect = 0.0
 Identities = 339/359 (94%), Positives = 345/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QER
Sbjct: 230  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQER 289

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 290  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 349

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 350  GKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 409

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIR+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 410  KTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 469

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 470  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 529

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQV
Sbjct: 530  PVMGIVQDTLLGCRKITKRDTLIPKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQV 588


>gb|AAS79687.1| RNA polymerase II large subunit, partial [Ginkgo biloba]
          Length = 1013

 Score =  701 bits (1810), Expect = 0.0
 Identities = 338/359 (94%), Positives = 348/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDT++RSEDDLTHQLAMIIRHNENL+RQER
Sbjct: 154  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTTSRSEDDLTHQLAMIIRHNENLKRQER 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSIC+RLKAKEGRIRGNLM
Sbjct: 214  NGAPAHIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICNRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+P+P ILKPRPLWTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGKQV 512


>gb|AAQ08515.1| RNA polymerase II largest subunit, partial [Zea mays]
          Length = 1009

 Score =  699 bits (1804), Expect = 0.0
 Identities = 339/359 (94%), Positives = 346/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 150  LGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 209

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 210  NGAPAHIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 269

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 270  GKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 329

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 330  KTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 389

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 390  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 449

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDT IEKDVFMNILMWW+DFDGK+PAP ILKPRP+WTGKQV
Sbjct: 450  PVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIWTGKQV 508


>gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja occidentalis]
          Length = 1013

 Score =  699 bits (1804), Expect = 0.0
 Identities = 338/359 (94%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDT++RSEDDLTHQLAMIIRHNENL++QE+
Sbjct: 154  LGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTTSRSEDDLTHQLAMIIRHNENLKKQEK 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
             GAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 214  TGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQV 512


>gb|AAQ08513.1| RNA polymerase II largest subunit, partial [Pinus nigra]
          Length = 1013

 Score =  699 bits (1804), Expect = 0.0
 Identities = 337/359 (93%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDT++RSEDDLTHQLAMIIRHNENL++QE+
Sbjct: 154  LGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTTSRSEDDLTHQLAMIIRHNENLKKQEK 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 214  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDP INID+LGVPWSIALNLTYPETVTPYN+ERLKELVEYGPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNMERLKELVEYGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I KPRP+WTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTIYKPRPIWTGKQV 512


>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
          Length = 1010

 Score =  698 bits (1801), Expect = 0.0
 Identities = 338/359 (94%), Positives = 348/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNP+YARPDWMILQ L         SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQER
Sbjct: 151  LGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQER 210

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLM
Sbjct: 211  NGAPAHIISEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLM 270

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG
Sbjct: 271  GKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 330

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIR+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 331  KTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 390

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NR
Sbjct: 391  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 450

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV
Sbjct: 451  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 509


>gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymphaea odorata]
          Length = 1013

 Score =  698 bits (1801), Expect = 0.0
 Identities = 339/359 (94%), Positives = 347/359 (96%)
 Frame = +3

Query: 3    LGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRRQER 182
            LGLNPKYARPDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLRRQER
Sbjct: 154  LGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER 213

Query: 183  NGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 362
            NGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM
Sbjct: 214  NGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLM 273

Query: 363  GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPG 542
            GKRVDFSARTVITPDPTINIDELGVPWSIALN+TYPETVTPYNIERLKELVE GPHPPPG
Sbjct: 274  GKRVDFSARTVITPDPTINIDELGVPWSIALNMTYPETVTPYNIERLKELVENGPHPPPG 333

Query: 543  KTGARYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH 722
            KTGA+YIIREDGQR+DLRYL+KSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH
Sbjct: 334  KTGAKYIIREDGQRVDLRYLRKSSDHHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGH 393

Query: 723  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 902
            RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQ FETRAEVLELMMVPKCIVSPQSNR
Sbjct: 394  RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQCFETRAEVLELMMVPKCIVSPQSNR 453

Query: 903  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQV 1079
            PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAI+KPRPLWTGKQV
Sbjct: 454  PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAIMKPRPLWTGKQV 512