BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00018698
         (879 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   472   e-150
emb|CDP14969.1| unnamed protein product [Coffea canephora] >gi|6...   429   e-149
ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-lik...   434   e-147
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [...   430   e-147
gb|KVH98536.1| Aspartate decarboxylase-like domain-containing pr...   435   e-146
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras...   426   e-146
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso...   459   e-145
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso...   459   e-145
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...   459   e-145
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...   457   e-145
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...   458   e-145
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se...   437   e-145
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su...   456   e-144
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt...   422   e-144
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An...   455   e-144
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De...   454   e-144
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...   452   e-143
gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna ...   426   e-142
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su...   449   e-142
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   444   e-141

>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  472 bits (1214), Expect = e-150
 Identities = 233/250 (93%), Positives = 235/250 (94%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1   MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKKKCAGG           DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>emb|CDP14969.1| unnamed protein product [Coffea canephora]
 emb|CDP01841.1| unnamed protein product [Coffea canephora]
          Length = 295

 Score =  429 bits (1103), Expect = e-149
 Identities = 208/250 (83%), Positives = 223/250 (89%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1   MDVRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADEED +
Sbjct: 61  DRKMKCETCMASMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDPK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQAL+IRNPKNRLK+I DACK+K KC GG           +EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGG-DEIDVQGQDSEEPVKKTRGGCGAQQPKLT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYK  KKK+DD EQLPEPVERKQQLSAE+VLS+LKRISDEDC LLG NPKYA
Sbjct: 180 IDGMKMVAEYKVQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRISDEDCQLLGFNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-like [Herrania umbratica]
          Length = 545

 Score =  434 bits (1115), Expect = e-147
 Identities = 211/250 (84%), Positives = 226/250 (90%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1   MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKI+NPKNRLK+I DACK+K KC GG           +EPVKK RGGCGAQQP ++
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGG-DEIDVQGQDTEEPVKKSRGGCGAQQPKLS 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKM+AEYK  +K++DD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
          Length = 460

 Score =  430 bits (1105), Expect = e-147
 Identities = 210/250 (84%), Positives = 225/250 (90%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETM  GKPKV GLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMMGGKPKVAGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEED +
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEEDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLK+I DACK+K KC GG           +EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGG-DEIDVQGQESEEPVKKSRGGCGAQQPKLT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>gb|KVH98536.1| Aspartate decarboxylase-like domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 649

 Score =  435 bits (1118), Expect = e-146
 Identities = 216/250 (86%), Positives = 223/250 (89%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EHGET ERGKPKV GLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQA KIRNPKNRLK+I DACKSK KC GG           DEPVKK RGGCGAQQP IT
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKSKSKCEGG-DEIDSQNQDTDEPVKKSRGGCGAQQPKIT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           I+GMKMVAEYK  KKKSDD EQLPEP ERKQQLSAERVLSVLKRISDEDC+LLGLNPKYA
Sbjct: 180 IEGMKMVAEYKLQKKKSDDSEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
          Length = 460

 Score =  426 bits (1096), Expect = e-146
 Identities = 208/250 (83%), Positives = 224/250 (89%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETM  GKPKV GLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMMGGKPKVAGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLK+I DACK+K KC GG           +EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKAKCEGG-DEIDVQGQESEEPVKKSRGGCGAQQPKLT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  459 bits (1180), Expect = e-145
 Identities = 226/250 (90%), Positives = 230/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKKKCAGG           +EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  459 bits (1180), Expect = e-145
 Identities = 226/250 (90%), Positives = 230/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKKKCAGG           +EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
           dactylifera]
          Length = 1842

 Score =  459 bits (1180), Expect = e-145
 Identities = 223/250 (89%), Positives = 232/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPK+RLKRIYDACK+KKKCAGG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score =  457 bits (1175), Expect = e-145
 Identities = 223/250 (89%), Positives = 231/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPK+RLKRIYDACK+KKKCAGG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
           guineensis]
          Length = 1842

 Score =  458 bits (1178), Expect = e-145
 Identities = 223/250 (89%), Positives = 232/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPK+RLKRIYDACK+KKKCAGG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
          Length = 860

 Score =  437 bits (1125), Expect = e-145
 Identities = 214/250 (85%), Positives = 228/250 (91%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61  DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKK CAGG           DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           +DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1832

 Score =  456 bits (1173), Expect = e-144
 Identities = 223/250 (89%), Positives = 230/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK  GLSDPRLGTI
Sbjct: 1   MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKKKC+GG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
          Length = 452

 Score =  422 bits (1086), Expect = e-144
 Identities = 204/250 (81%), Positives = 225/250 (90%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1   MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE D +
Sbjct: 61  DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADENDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQAL+I+NPKNRL++I DACK+K KC GG           +EPVKK RGGCGAQQP IT
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGG-DDIDLPGQDTEEPVKKSRGGCGAQQPKIT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYA
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDW+ILQVL
Sbjct: 240 RPDWLILQVL 249


>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
 gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
          Length = 1854

 Score =  455 bits (1171), Expect = e-144
 Identities = 223/250 (89%), Positives = 231/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKK+CAGG           DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           +DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPKYA
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
          Length = 1841

 Score =  454 bits (1169), Expect = e-144
 Identities = 222/250 (88%), Positives = 229/250 (91%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADEED R
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRLKRIYDACKSKKKCAGG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           +DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 VDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score =  452 bits (1162), Expect = e-143
 Identities = 220/250 (88%), Positives = 228/250 (91%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           M+ RF YSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDDTR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPKNRL+RIYDACKSKKKCAGG           +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna angularis]
          Length = 725

 Score =  426 bits (1096), Expect = e-142
 Identities = 210/250 (84%), Positives = 223/250 (89%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1   MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKILADE D +
Sbjct: 61  DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FK AL+IRNPKNRLK+I DACK+K KC GG           DEPVKK RGGCGAQQP IT
Sbjct: 121 FKLALRIRNPKNRLKKILDACKNKGKCEGG-DEIDIPGQDTDEPVKKSRGGCGAQQPKIT 179

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYA
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYA 239

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 240 RPDWMILQVL 249


>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
           guineensis]
          Length = 1842

 Score =  449 bits (1154), Expect = e-142
 Identities = 218/250 (87%), Positives = 230/250 (92%)
 Frame = -3

Query: 784 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 605
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 604 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 425
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 424 FKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 245
           FKQALKIRNPK+RLKRI DACKSKKKCAGG           +EP+KK RGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180

Query: 244 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 65
           IDGMKMVAEYKAPKKKSDD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240

Query: 64  RPDWMILQVL 35
           RPDWMILQVL
Sbjct: 241 RPDWMILQVL 250


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  444 bits (1141), Expect = e-141
 Identities = 223/272 (81%), Positives = 230/272 (84%), Gaps = 19/272 (6%)
 Frame = -3

Query: 793 SYTMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRL 614
           S  MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRL
Sbjct: 41  SVDMDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRL 100

Query: 613 GTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE- 437
           GTIDRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADE 
Sbjct: 101 GTIDRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEL 160

Query: 436 ------------------EDARFKQALKIRNPKNRLKRIYDACKSKKKCAGGXXXXXXXX 311
                             ED RFKQALKIRNPKNRLKRIYDACKSKKKCAGG        
Sbjct: 161 YLFSCLAISLLTSIAFSQEDTRFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQ 220

Query: 310 XXXDEPVKKIRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERV 131
              +EP+KK RGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERV
Sbjct: 221 QDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERV 280

Query: 130 LSVLKRISDEDCLLLGLNPKYARPDWMILQVL 35
           LSVLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 281 LSVLKRISDEDCQLLGLNPKYARPDWMILQVL 312