BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00018573
         (1170 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020679675.1| TATA box-binding protein-associated factor R...   243   4e-89
gb|PKU82052.1| TATA box-binding protein-associated factor RNA po...   231   2e-85
ref|XP_020113039.1| TATA box-binding protein-associated factor R...   283   3e-85
ref|XP_020113036.1| TATA box-binding protein-associated factor R...   283   4e-85
ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associat...   277   6e-83
gb|PKA66228.1| TATA box-binding protein-associated factor RNA po...   224   7e-82
ref|XP_015637371.1| PREDICTED: TATA box-binding protein-associat...   232   1e-80
ref|XP_020149174.1| TATA box-binding protein-associated factor R...   222   1e-79
ref|XP_019709759.1| PREDICTED: TATA box-binding protein-associat...   264   1e-79
sp|Q5W770.2|TAF1B_ORYSJ RecName: Full=TATA box-binding protein-a...   226   7e-79
ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associat...   266   1e-78
sp|B8AX23.1|TAF1B_ORYSI RecName: Full=TATA box-binding protein-a...   224   3e-78
gb|EMS59897.1| hypothetical protein TRIUR3_17246 [Triticum urartu]    212   4e-78
gb|OAY63659.1| TATA box-binding protein-associated factor RNA po...   269   9e-78
ref|XP_012702773.2| TATA box-binding protein-associated factor R...   229   1e-77
ref|XP_022683731.1| TATA box-binding protein-associated factor R...   228   2e-77
gb|PNT76985.1| hypothetical protein BRADI_1g56620v3 [Brachypodiu...   221   1e-76
ref|XP_006655219.2| PREDICTED: TATA box-binding protein-associat...   219   3e-76
ref|XP_010228327.1| PREDICTED: TATA box-binding protein-associat...   219   4e-76
ref|XP_014753417.1| PREDICTED: TATA box-binding protein-associat...   219   4e-76

>ref|XP_020679675.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            [Dendrobium catenatum]
          Length = 667

 Score =  243 bits (620), Expect(2) = 4e-89
 Identities = 132/256 (51%), Positives = 167/256 (65%), Gaps = 10/256 (3%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CP SS+ LFRP  VI A  LEAT ASIAQ+IGL  PSVNFYA+A RYLK + LPV KIL 
Sbjct: 296  CPFSSRQLFRPTGVISASLLEATGASIAQSIGLRTPSVNFYAIAQRYLKSLSLPVAKILP 355

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
             AC +YEWSLP++LWLSS +   PTRA VM+ILIVA+R+LYNI GQG WE S++D+ N++
Sbjct: 356  QACRLYEWSLPSELWLSSCNYALPTRAYVMAILIVAIRILYNIHGQGIWERSQIDMSNST 415

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
            S     H  A   + + +                  S P K     Q S++  +ELL IL
Sbjct: 416  SFGHKHHGAAQENDATEL------------------SAP-KDFPCSQNSEFCTKELLQIL 456

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQ--EDDNAG 438
            +  Y +I+T H+YS D+ SYLKYC+DV++AGLT SYEE KLIERLWD+Y+K+  ED++  
Sbjct: 457  DTAYHRISTTHEYSKDLRSYLKYCRDVIFAGLTPSYEEGKLIERLWDLYDKEEIEDEHID 516

Query: 437  E--------AKRPRTG 414
            E         KRPR G
Sbjct: 517  EETEFFELKGKRPRIG 532



 Score =  115 bits (288), Expect(2) = 4e-89
 Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
 Frame = -3

Query: 364 TLPNCRTSIINAAIEKIKLEMEENGFEYLPPR-LHQKVGYVHYRRQRIDGKLVCVAHADY 188
           T P+   +  N + E +K +ME+NGF+YLPPR L +  GY+HY RQRIDG L+ VAHADY
Sbjct: 558 TSPSSSRAAKNTSREHMKFDMEDNGFQYLPPRGLKKADGYLHYSRQRIDGNLIFVAHADY 617

Query: 187 YILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQID 77
           YILLR CAKLA+VD + +H  VL  E++LEWI+++ID
Sbjct: 618 YILLRACAKLAQVDPRILHVGVLKFEKKLEWIEQRID 654


>gb|PKU82052.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            [Dendrobium catenatum]
          Length = 671

 Score =  231 bits (589), Expect(2) = 2e-85
 Identities = 130/256 (50%), Positives = 163/256 (63%), Gaps = 10/256 (3%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CP SS+ LFRP  VI A  LEAT ASIAQ+IGL  PSVNFYA+A RYLK + LPV KIL 
Sbjct: 304  CPFSSRQLFRPTGVISASLLEATGASIAQSIGLRTPSVNFYAIAQRYLKSLSLPVAKILP 363

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
             AC +YEWSLP++LWLSS +   PTRA VM+ILIVA+R+LYNI GQG WE S++D+ N++
Sbjct: 364  QACRLYEWSLPSELWLSSCNYALPTRAYVMAILIVAIRILYNIHGQGIWERSQIDMSNST 423

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
            S     H  A   + + +                  S P K     Q S++  +ELL IL
Sbjct: 424  SFGHKHHGAAQENDATEL------------------SAP-KDFPCSQNSEFCTKELLQIL 464

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQ--EDDNAG 438
            +  Y +I     YS D+ SYLKYC+DV++AGLT SYEE KLIERLWD+Y+K+  ED++  
Sbjct: 465  DTAYHRIK----YSKDLRSYLKYCRDVIFAGLTPSYEEGKLIERLWDLYDKEEIEDEHID 520

Query: 437  E--------AKRPRTG 414
            E         KRPR G
Sbjct: 521  EETEFFELKGKRPRIG 536



 Score =  115 bits (288), Expect(2) = 2e-85
 Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
 Frame = -3

Query: 364 TLPNCRTSIINAAIEKIKLEMEENGFEYLPPR-LHQKVGYVHYRRQRIDGKLVCVAHADY 188
           T P+   +  N + E +K +ME+NGF+YLPPR L +  GY+HY RQRIDG L+ VAHADY
Sbjct: 562 TSPSSSRAAKNTSREHMKFDMEDNGFQYLPPRGLKKADGYLHYSRQRIDGNLIFVAHADY 621

Query: 187 YILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQID 77
           YILLR CAKLA+VD + +H  VL  E++LEWI+++ID
Sbjct: 622 YILLRACAKLAQVDPRILHVGVLKFEKKLEWIEQRID 658


>ref|XP_020113039.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X2 [Ananas comosus]
          Length = 720

 Score =  283 bits (723), Expect = 3e-85
 Identities = 141/243 (58%), Positives = 174/243 (71%), Gaps = 1/243 (0%)
 Frame = -2

Query: 1169 LGNPCT-CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYL 993
            LG P + CPLS++ LFRP  V+G  QLE TAASI+Q IGL LPSVNFYA+A RYL E+ L
Sbjct: 325  LGTPSSDCPLSTRFLFRPIRVVGPWQLEETAASISQAIGLRLPSVNFYAIARRYLHELSL 384

Query: 992  PVEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSK 813
            PVEKIL+HAC +YEWSLP +LWLSSN+S  PTR CVMSILIV +R+LYNI GQGTWEM  
Sbjct: 385  PVEKILQHACRLYEWSLPAELWLSSNASRLPTRVCVMSILIVTLRILYNIHGQGTWEMGL 444

Query: 812  LDVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNC 633
             D+ ++ S         D +N SS QK   AD  ++   +   S   K L+  + S++  
Sbjct: 445  SDIADSLSCGHQFEENVDESNSSSRQKLGVADQGSRACQSTTNSSTVKNLMDNKTSEFET 504

Query: 632  RELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE 453
            +ELLSILEA Y KIN  HDY+ D+ SYLKYCKDV + G+T SY+E+ LIERLWD+Y K+E
Sbjct: 505  KELLSILEAAYGKINVRHDYAKDLPSYLKYCKDVAFTGITTSYDEETLIERLWDIYSKKE 564

Query: 452  DDN 444
            DDN
Sbjct: 565  DDN 567



 Score =  115 bits (288), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = -3

Query: 328 AIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKLAE 152
           AIE++K EMEENGF YLPPR  ++  GY+HY+R+++DG+L+ VAHADYYILLR  AKLA+
Sbjct: 614 AIERMKQEMEENGFHYLPPRAQKRTEGYLHYKRKKVDGRLIYVAHADYYILLRSFAKLAQ 673

Query: 151 VDVKTMHRCVLSLERRLEWIDKQID 77
           VDV+ MH  VL LERRL WI+ +ID
Sbjct: 674 VDVRIMHLGVLKLERRLGWIELRID 698


>ref|XP_020113036.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X1 [Ananas comosus]
 ref|XP_020113037.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X1 [Ananas comosus]
 ref|XP_020113038.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X1 [Ananas comosus]
          Length = 721

 Score =  283 bits (723), Expect = 4e-85
 Identities = 141/243 (58%), Positives = 174/243 (71%), Gaps = 1/243 (0%)
 Frame = -2

Query: 1169 LGNPCT-CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYL 993
            LG P + CPLS++ LFRP  V+G  QLE TAASI+Q IGL LPSVNFYA+A RYL E+ L
Sbjct: 326  LGTPSSDCPLSTRFLFRPIRVVGPWQLEETAASISQAIGLRLPSVNFYAIARRYLHELSL 385

Query: 992  PVEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSK 813
            PVEKIL+HAC +YEWSLP +LWLSSN+S  PTR CVMSILIV +R+LYNI GQGTWEM  
Sbjct: 386  PVEKILQHACRLYEWSLPAELWLSSNASRLPTRVCVMSILIVTLRILYNIHGQGTWEMGL 445

Query: 812  LDVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNC 633
             D+ ++ S         D +N SS QK   AD  ++   +   S   K L+  + S++  
Sbjct: 446  SDIADSLSCGHQFEENVDESNSSSRQKLGVADQGSRACQSTTNSSTVKNLMDNKTSEFET 505

Query: 632  RELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE 453
            +ELLSILEA Y KIN  HDY+ D+ SYLKYCKDV + G+T SY+E+ LIERLWD+Y K+E
Sbjct: 506  KELLSILEAAYGKINVRHDYAKDLPSYLKYCKDVAFTGITTSYDEETLIERLWDIYSKKE 565

Query: 452  DDN 444
            DDN
Sbjct: 566  DDN 568



 Score =  115 bits (288), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = -3

Query: 328 AIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKLAE 152
           AIE++K EMEENGF YLPPR  ++  GY+HY+R+++DG+L+ VAHADYYILLR  AKLA+
Sbjct: 615 AIERMKQEMEENGFHYLPPRAQKRTEGYLHYKRKKVDGRLIYVAHADYYILLRSFAKLAQ 674

Query: 151 VDVKTMHRCVLSLERRLEWIDKQID 77
           VDV+ MH  VL LERRL WI+ +ID
Sbjct: 675 VDVRIMHLGVLKLERRLGWIELRID 699


>ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Phoenix dactylifera]
          Length = 744

 Score =  277 bits (709), Expect = 6e-83
 Identities = 140/246 (56%), Positives = 174/246 (70%), Gaps = 1/246 (0%)
 Frame = -2

Query: 1169 LGNPCT-CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYL 993
            LG+P   CPLS++ LFRP   IGA  LEA A SIAQ IGL LPSVNFYA+A RY KE+ L
Sbjct: 311  LGSPSNACPLSTRFLFRPVQAIGAWHLEAAAGSIAQNIGLRLPSVNFYAIACRYSKELTL 370

Query: 992  PVEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSK 813
            P+EKI+ HAC +YEWS+P +LWLSSN+S  PTR CVMSILIV +R+LYNI GQG WEMS 
Sbjct: 371  PLEKIIPHACRLYEWSIPAELWLSSNASRIPTRVCVMSILIVTIRILYNIHGQGIWEMSL 430

Query: 812  LDVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNC 633
             D  ++ S     +   D    SS    E    +AK      GS P  KLL  +A++++ 
Sbjct: 431  SDCDSSPSCYPRVNHNLDEQKSSSAPNFEVKGGDAKESSRTTGSSPKNKLLHNKAAEFDT 490

Query: 632  RELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE 453
            +ELL ILEA YDKI+ AHDYS D+ SYLKYCKD+++AG+T SY+E+ LIERLW++Y+KQE
Sbjct: 491  KELLGILEAAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNIYDKQE 550

Query: 452  DDNAGE 435
             DN  E
Sbjct: 551  VDNLQE 556



 Score =  122 bits (306), Expect = 2e-26
 Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
 Frame = -3

Query: 346 TSIINAAIEKIKLEMEENGFEYLPPRLHQKVG-YVHYRRQRIDGKLVCVAHADYYILLRV 170
           TS  ++ + K+K+ MEENGF+YLPPR+HQ+   Y+HY R+R+DGKL+ VAHADYYI+LR 
Sbjct: 632 TSSKSSTLAKMKINMEENGFQYLPPRIHQRTDDYLHYGRKRVDGKLIYVAHADYYIILRA 691

Query: 169 CAKLAEVDVKTMHRCVLSLERRLEWIDKQID 77
           C+KLA+VDV+ MH  VL  ERRL WI++QI+
Sbjct: 692 CSKLAQVDVRIMHLSVLKFERRLAWIEQQIE 722


>gb|PKA66228.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            [Apostasia shenzhenica]
          Length = 701

 Score =  224 bits (572), Expect(2) = 7e-82
 Identities = 121/255 (47%), Positives = 164/255 (64%), Gaps = 10/255 (3%)
 Frame = -2

Query: 1148 PLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILRH 969
            PLSS+ +FRP  V+ A  LE TAA+IA++ G+  PS+NFYA+A RYLKE+ LPV KIL+ 
Sbjct: 318  PLSSRLMFRPIRVVSAWLLEVTAATIAESCGIRTPSLNFYAIALRYLKELSLPVSKILQQ 377

Query: 968  ACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNASS 789
            AC +YEWSLP++LWLS+N  G PTR  +MSILIV +R+LYNI GQG WE      +  S 
Sbjct: 378  ACKLYEWSLPSELWLSNNKYGLPTRVYLMSILIVTIRILYNIHGQGVWESQYNSKK--SM 435

Query: 788  NDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSILE 609
            +D+++     + NL S QK       + +  N +   P       +  + +  +LL ILE
Sbjct: 436  SDRSNPGDLGSLNLISKQKVGSNHFISSQDGNIMKPSPVTDFSSDRTPELSTVQLLQILE 495

Query: 608  ATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDNAG--- 438
            A Y K  T ++YS D+ SYLKYCKDV++ GLT S++E KLI RLWD+Y+KQ+DD+ G   
Sbjct: 496  AAYHK-TTTNEYSKDLLSYLKYCKDVIFPGLTPSFDEGKLIRRLWDLYDKQQDDDVGLET 554

Query: 437  -------EAKRPRTG 414
                   + KRPR G
Sbjct: 555  ETEFPESKHKRPRDG 569



 Score =  109 bits (273), Expect(2) = 7e-82
 Identities = 49/87 (56%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = -3

Query: 334 NAAIEKIKLEMEENGFEYLPPRLHQKVG-YVHYRRQRIDGKLVCVAHADYYILLRVCAKL 158
           + AIE +K +ME+NGF YL P+++ +   Y+HY+RQ IDGK + VAHADYYILLR CAKL
Sbjct: 605 SVAIENMKFDMEDNGFHYLEPKVYHRADCYLHYKRQNIDGKFIYVAHADYYILLRACAKL 664

Query: 157 AEVDVKTMHRCVLSLERRLEWIDKQID 77
           A+VD + +H  VL  E+RL+WI+++ID
Sbjct: 665 AQVDPRILHIGVLKFEKRLDWIEQRID 691


>ref|XP_015637371.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Oryza sativa Japonica Group]
          Length = 630

 Score =  232 bits (591), Expect(2) = 1e-80
 Identities = 123/237 (51%), Positives = 152/237 (64%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPLSS+ LFRP  VIGA QLEA A SIAQ IGL LPSVNFY +A R+LKE+ LP+EKIL 
Sbjct: 282  CPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEKILP 341

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN    P+R CVM+ILIVA+R+LY I GQG WE S     NA 
Sbjct: 342  HACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWE-SIAQTENAV 400

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P A   +                        PD       + +++ RELL  L
Sbjct: 401  GSD----PEASAPH---------------------SIEPDSN----NSEEFDARELLCTL 431

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDNA 441
             A+YDKIN  HDYS ++ SYLKYCKDV++ G+T S EE+ LI+  WDMY+ +ED+NA
Sbjct: 432  AASYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSLEEEHLIDIFWDMYKGKEDENA 488



 Score = 98.2 bits (243), Expect(2) = 1e-80
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = -3

Query: 352 CRTSIINAAIEKIKLEMEENGFEYLPPRLHQ-KVGYVHYRRQRIDGKLVCVAHADYYILL 176
           C T + N A++ IK +MEENGF Y+ PR      GY+ Y R+   G L+ VAHADYYILL
Sbjct: 516 CSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIYVAHADYYILL 575

Query: 175 RVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           R  AKLAEVDV+ +H  VL LERRL WI++++
Sbjct: 576 RPFAKLAEVDVRVLHSSVLKLERRLGWIEERV 607


>ref|XP_020149174.1| TATA box-binding protein-associated factor RNA polymerase I subunit
            B-like [Aegilops tauschii subsp. tauschii]
          Length = 630

 Score =  222 bits (566), Expect(2) = 1e-79
 Identities = 120/236 (50%), Positives = 146/236 (61%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPLS++ LFRP  VIG  QLEA A SIAQ IGL LPSVNFYA+A RYL E+ LP+E+IL 
Sbjct: 292  CPLSARQLFRPVRVIGTWQLEAAAGSIAQRIGLQLPSVNFYAIAQRYLNELSLPIERILP 351

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW+LP +LWLSSN    PTR CVM+ILIVA+R+ YNI GQG WE      RNA 
Sbjct: 352  HACRIYEWALPAELWLSSNPLRVPTRVCVMAILIVALRVQYNINGQGIWEEICETGRNAD 411

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D         ANL                       P K+     + ++  RELL  L
Sbjct: 412  GSD-------PDANLP----------------------PSKRPEGGTSEEFGTRELLCTL 442

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDN 444
             + YDKI+ AHDYS D+ SYLKYCKD+++ G+  S EE  L+E   DMY+ +ED N
Sbjct: 443  ASAYDKIDVAHDYSKDLHSYLKYCKDIVFPGIACSVEEDHLVEIFQDMYKGREDGN 498



 Score =  104 bits (260), Expect(2) = 1e-79
 Identities = 49/86 (56%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = -3

Query: 334 NAAIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKL 158
           ++ +++IK EME++GF YLPPR   +  GY+HYRR+ I G LVC+ HADYY+L+R  AKL
Sbjct: 532 SSEMQRIKSEMEDHGFCYLPPRKWLRSNGYLHYRRKTITGSLVCIGHADYYVLIRSFAKL 591

Query: 157 AEVDVKTMHRCVLSLERRLEWIDKQI 80
           AEVDV+ +H  VL LERRL WI+++I
Sbjct: 592 AEVDVRVLHTSVLKLERRLAWIEERI 617


>ref|XP_019709759.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Elaeis guineensis]
          Length = 572

 Score =  264 bits (675), Expect = 1e-79
 Identities = 134/246 (54%), Positives = 173/246 (70%), Gaps = 1/246 (0%)
 Frame = -2

Query: 1169 LGNPCT-CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYL 993
            LG+P   CPLS++ LFRP   IGA  LEA A SIAQ IGL LPSVNFYA+A RY KE+ L
Sbjct: 151  LGSPSNACPLSTRFLFRPVRAIGAWHLEAAAGSIAQNIGLRLPSVNFYAIACRYSKELTL 210

Query: 992  PVEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSK 813
            P+EKI+ HAC +YEWS+P +LWLSSN+S  PTR CVMSILIV +R+LYNI G G WEMS 
Sbjct: 211  PLEKIIPHACRLYEWSIPAELWLSSNASRIPTRVCVMSILIVTIRILYNIHGHGIWEMSL 270

Query: 812  LDVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNC 633
             D  ++ S     +       +SS+        +AK+    +GS    K+L  +A++++ 
Sbjct: 271  SDRDSSPSCYTRVNHNPGELKVSSVPDFGEIGGDAKKFSWTMGSTSQNKVLHNKATEFDT 330

Query: 632  RELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE 453
            +ELL ILE  YDKI+ AHDYS D+ SYLKYCKD+++AG+T SY+E+ LIERLW++Y+KQE
Sbjct: 331  KELLGILEGAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNIYDKQE 390

Query: 452  DDNAGE 435
             DN  E
Sbjct: 391  VDNLQE 396



 Score =  129 bits (324), Expect = 3e-29
 Identities = 58/91 (63%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -3

Query: 346 TSIINAAIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRV 170
           TS  +  ++K+K+ MEENGF+YLPPRLHQ+  GY+HY+R+R+DGKL+ VAHADYYI+LR 
Sbjct: 468 TSCKSYTLDKMKINMEENGFQYLPPRLHQRTDGYLHYKRKRVDGKLIYVAHADYYIILRA 527

Query: 169 CAKLAEVDVKTMHRCVLSLERRLEWIDKQID 77
           CAKLA+VDV+ MH  VL  ERRL WI++QI+
Sbjct: 528 CAKLAQVDVRVMHLSVLKFERRLAWIEQQIE 558


>sp|Q5W770.2|TAF1B_ORYSJ RecName: Full=TATA box-binding protein-associated factor RNA
            polymerase I subunit B; AltName: Full=TATA box-binding
            protein-associated factor 1B; Short=TBP-associated factor
            1B
          Length = 634

 Score =  226 bits (576), Expect(2) = 7e-79
 Identities = 123/241 (51%), Positives = 152/241 (63%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPLSS+ LFRP  VIGA QLEA A SIAQ IGL LPSVNFY +A R+LKE+ LP+EKIL 
Sbjct: 282  CPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEKILP 341

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN    P+R CVM+ILIVA+R+LY I GQG WE S     NA 
Sbjct: 342  HACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWE-SIAQTENAV 400

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P A   +                        PD       + +++ RELL  L
Sbjct: 401  GSD----PEASAPH---------------------SIEPDSN----NSEEFDARELLCTL 431

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE----DDN 444
             A+YDKIN  HDYS ++ SYLKYCKDV++ G+T S EE+ LI+  WDMY+ +E    D+N
Sbjct: 432  AASYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSLEEEHLIDIFWDMYKGKEVMLLDEN 491

Query: 443  A 441
            A
Sbjct: 492  A 492



 Score = 98.2 bits (243), Expect(2) = 7e-79
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = -3

Query: 352 CRTSIINAAIEKIKLEMEENGFEYLPPRLHQ-KVGYVHYRRQRIDGKLVCVAHADYYILL 176
           C T + N A++ IK +MEENGF Y+ PR      GY+ Y R+   G L+ VAHADYYILL
Sbjct: 520 CSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIYVAHADYYILL 579

Query: 175 RVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           R  AKLAEVDV+ +H  VL LERRL WI++++
Sbjct: 580 RPFAKLAEVDVRVLHSSVLKLERRLGWIEERV 611


>ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Musa acuminata subsp. malaccensis]
 ref|XP_018679650.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Musa acuminata subsp. malaccensis]
 ref|XP_018679651.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Musa acuminata subsp. malaccensis]
 ref|XP_018679652.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Musa acuminata subsp. malaccensis]
 ref|XP_018679653.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Musa acuminata subsp. malaccensis]
          Length = 742

 Score =  266 bits (680), Expect = 1e-78
 Identities = 135/236 (57%), Positives = 170/236 (72%)
 Frame = -2

Query: 1154 TCPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKIL 975
            +C LSS+ LFRP  VIG+ QLEA A SIAQ IGL LPSVNFYA+A RYLK++ LP EKIL
Sbjct: 327  SCSLSSRLLFRPVRVIGSWQLEAVAGSIAQKIGLNLPSVNFYAIASRYLKDLSLPTEKIL 386

Query: 974  RHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNA 795
              AC +YEWS+P DLWLS N+S  PTR CVM+ILIV +R+LYNI GQG WEM+ LD  + 
Sbjct: 387  PQACRLYEWSIPADLWLSCNTSRLPTRVCVMAILIVTVRILYNIHGQGFWEMTLLDASD- 445

Query: 794  SSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSI 615
            +   QT +P  D  +LS   K   A   AK  C    S   K +  I+++D+N +ELL I
Sbjct: 446  TPRCQTRNP--DVFSLSPAGKLGDAAGGAKGSCFTTNSSTVKNMSSIKSADFNTKELLDI 503

Query: 614  LEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDD 447
            L+A +DKI+TAHDYS D+ SYLKYC+DV++ G+T SY+E+ LIER W+ Y+KQEDD
Sbjct: 504  LQAAHDKISTAHDYSRDLRSYLKYCQDVVFGGMTTSYDEQTLIERFWETYDKQEDD 559



 Score =  127 bits (318), Expect = 4e-28
 Identities = 58/98 (59%), Positives = 80/98 (81%), Gaps = 4/98 (4%)
 Frame = -3

Query: 358 PNCRTSII---NAAIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHAD 191
           P C +S+    NAA+E++KL MEE+GF YLPPR+ ++  GY+HY+R+R+DGKL+CVAHAD
Sbjct: 629 PLCNSSLTPSRNAAVERMKLSMEESGFYYLPPRVQKRTDGYLHYKRKRLDGKLICVAHAD 688

Query: 190 YYILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQID 77
           YYI+LR CAK+A+VD++ MH  VL  ERRL WI+++ID
Sbjct: 689 YYIVLRACAKVAQVDMRMMHLGVLKFERRLAWIEQRID 726


>sp|B8AX23.1|TAF1B_ORYSI RecName: Full=TATA box-binding protein-associated factor RNA
            polymerase I subunit B; AltName: Full=TATA box-binding
            protein-associated factor 1B; Short=TBP-associated factor
            1B
 gb|EEC79036.1| hypothetical protein OsI_19584 [Oryza sativa Indica Group]
          Length = 634

 Score =  224 bits (571), Expect(2) = 3e-78
 Identities = 122/241 (50%), Positives = 152/241 (63%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPLSS+ LFRP  VIGA QLEA A SIAQ IGL LPSVNFY +A R+LKE+ LP+EKIL 
Sbjct: 282  CPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIEKILP 341

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN    P+R CVM+ILIVA+R+LY I GQG WE S     NA 
Sbjct: 342  HACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWE-SIAQTENAV 400

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P A   +                        PD       + +++ RELL  L
Sbjct: 401  GSD----PEASAPH---------------------SIEPDSN----NSEEFDARELLCTL 431

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQE----DDN 444
             A+YDKI+  HDYS ++ SYLKYCKDV++ G+T S EE+ LI+  WDMY+ +E    D+N
Sbjct: 432  AASYDKIDVGHDYSKEVHSYLKYCKDVVFTGMTFSLEEEHLIDIFWDMYKGKEVMLLDEN 491

Query: 443  A 441
            A
Sbjct: 492  A 492



 Score = 98.2 bits (243), Expect(2) = 3e-78
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = -3

Query: 352 CRTSIINAAIEKIKLEMEENGFEYLPPRLHQ-KVGYVHYRRQRIDGKLVCVAHADYYILL 176
           C T + N A++ IK +MEENGF Y+ PR      GY+ Y R+   G L+ VAHADYYILL
Sbjct: 520 CSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIYVAHADYYILL 579

Query: 175 RVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           R  AKLAEVDV+ +H  VL LERRL WI++++
Sbjct: 580 RPFAKLAEVDVRVLHSSVLKLERRLGWIEERV 611


>gb|EMS59897.1| hypothetical protein TRIUR3_17246 [Triticum urartu]
          Length = 645

 Score =  212 bits (539), Expect(2) = 4e-78
 Identities = 119/250 (47%), Positives = 144/250 (57%), Gaps = 14/250 (5%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPLS++ LFRP  VIG  QLEA A SIAQ IGL LPSVNFYA+A RYL E+ LP+E+IL 
Sbjct: 293  CPLSARQLFRPVRVIGTWQLEAAAGSIAQRIGLQLPSVNFYAIAQRYLNELSLPIERILP 352

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW+LP +LWLSSN    PTR CVM+ILIVA+R+ YNI GQG WE      RNA 
Sbjct: 353  HACRIYEWALPAELWLSSNPLRVPTRVCVMAILIVALRVQYNIHGQGIWEEICETGRNAD 412

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D                     D+N        G           + ++  RELL  L
Sbjct: 413  GSD--------------------PDENLPPSMRPEGG---------TSEEFGTRELLCTL 443

Query: 611  EATYDKINTA--------------HDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLW 474
             + YDKI+ A              HDYS D+ SYLKYCKD+++ G+  S EE  LIE   
Sbjct: 444  ASAYDKIDVAHGYTLICVEPLVYLHDYSKDLHSYLKYCKDIVFPGIACSIEEDHLIEIFQ 503

Query: 473  DMYEKQEDDN 444
            DMY+ +ED N
Sbjct: 504  DMYKGREDGN 513



 Score =  110 bits (274), Expect(2) = 4e-78
 Identities = 53/89 (59%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
 Frame = -3

Query: 343 SIINAAIEKIKLEMEENGFEYLPPR-LHQKVGYVHYRRQRIDGKLVCVAHADYYILLRVC 167
           S  ++ I++IK EME++GF YLPPR L +  GY+HYRR+ I G LVC+ HADYY+L+R  
Sbjct: 544 SASSSGIQRIKSEMEDHGFCYLPPRKLLRSNGYLHYRRKTITGSLVCIGHADYYVLIRSF 603

Query: 166 AKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           AKLAEVDV+ +H  VL LERRL WID++I
Sbjct: 604 AKLAEVDVRVLHTSVLKLERRLAWIDERI 632


>gb|OAY63659.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            [Ananas comosus]
          Length = 1053

 Score =  269 bits (687), Expect = 9e-78
 Identities = 141/268 (52%), Positives = 174/268 (64%), Gaps = 26/268 (9%)
 Frame = -2

Query: 1169 LGNPCT-CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYL 993
            LG P + CPLS++ LFRP  V+G  QLE TAASI+Q IGL LPSVNFYA+A RYL E+ L
Sbjct: 326  LGTPSSDCPLSTRFLFRPIRVVGPWQLEETAASISQAIGLRLPSVNFYAIARRYLHELSL 385

Query: 992  PVEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSK 813
            PVEKIL+HAC +YEWSLP +LWLSSN+S  PTR CVMSILIV +R+LYNI GQGTWEM  
Sbjct: 386  PVEKILQHACRLYEWSLPAELWLSSNASRLPTRVCVMSILIVTLRILYNIHGQGTWEMGL 445

Query: 812  LDVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNC 633
             D+ ++ S         D +N SS QK   AD  ++   +   S   K L+  + S++  
Sbjct: 446  SDIADSLSCGHQFEENVDESNSSSRQKLGVADQGSRACQSTTNSSTVKNLMDNKTSEFET 505

Query: 632  RELLSILEATYDKINTAH-------------------------DYSNDMSSYLKYCKDVL 528
            +ELLSILEA Y KIN  H                         DY+ D+ SYLKYCKDV 
Sbjct: 506  KELLSILEAAYGKINVRHGKYTVNHSNVVFSITFQCQIFIFDKDYAKDLPSYLKYCKDVA 565

Query: 527  YAGLTKSYEEKKLIERLWDMYEKQEDDN 444
            + G+T SY+E+ LIERLWD+Y K+EDDN
Sbjct: 566  FTGITTSYDEETLIERLWDIYSKKEDDN 593



 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = -3

Query: 328 AIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKLAE 152
           AIE++K EMEENGF YLPPR  ++  GY+HY+R+++DG+L+ VAHADYYILLR  AKLA+
Sbjct: 640 AIERMKQEMEENGFHYLPPRAQKRTEGYLHYKRKKVDGRLIYVAHADYYILLRSFAKLAQ 699

Query: 151 VDVKTMHRCVLSLERRLEWIDKQID 77
           VDV+ MH  VL LERRL WI+ +ID
Sbjct: 700 VDVRIMHLGVLKLERRLGWIELRID 724


>ref|XP_012702773.2| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X1 [Setaria italica]
 ref|XP_014660947.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X1 [Setaria italica]
 gb|KQK96100.1| hypothetical protein SETIT_009593mg [Setaria italica]
          Length = 634

 Score =  229 bits (584), Expect(2) = 1e-77
 Identities = 120/239 (50%), Positives = 152/239 (63%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPL ++ LFRP  VIGA QLEA A SIAQ I L LPSVNFYA+A R LK++ LPV+KIL 
Sbjct: 278  CPLDARQLFRPVQVIGAWQLEAAAGSIAQRICLRLPSVNFYAIAERCLKDLSLPVDKILP 337

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN +  PTR CVM+IL+V +R+LYNI GQG WE    + RNA 
Sbjct: 338  HACRIYEWAMPAELWLSSNPARVPTRVCVMAILLVTLRVLYNINGQGIWEKICEERRNAG 397

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P A++     +      DD+                    + ++  RELL  +
Sbjct: 398  GSD----PDANSPTFRML------DDS-------------------NSEEFGMRELLCAI 428

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDNAGE 435
             A YDKIN  HDYS+D+ SYLKYC DV++ G+T S EE+ L+E  WDMY+  EDDN  E
Sbjct: 429  AAAYDKINVVHDYSSDLCSYLKYCNDVIFTGITCSTEEEHLVEIFWDMYKAGEDDNPKE 487



 Score = 91.3 bits (225), Expect(2) = 1e-77
 Identities = 45/85 (52%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = -3

Query: 328 AIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKLAE 152
           A++ +K EM+++GF Y+PPR  +K  GY+ YRR+R+ G  V VAHADYY+LLR  +KLAE
Sbjct: 528 AVQMLKSEMQDHGFHYMPPRKPRKSDGYLRYRRRRLSGGFVYVAHADYYMLLRAFSKLAE 587

Query: 151 VDVKTMHRCVLSLERRLEWIDKQID 77
           V+V+ MH  VL LE RL  I+ +I+
Sbjct: 588 VNVRIMHISVLKLESRLACIEDRIE 612


>ref|XP_022683731.1| TATA box-binding protein-associated factor RNA polymerase I subunit B
            isoform X2 [Setaria italica]
          Length = 633

 Score =  228 bits (582), Expect(2) = 2e-77
 Identities = 120/239 (50%), Positives = 154/239 (64%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            CPL ++ LFRP  VIGA QLEA A SIAQ I L LPSVNFYA+A R LK++ LPV+KIL 
Sbjct: 278  CPLDARQLFRPVQVIGAWQLEAAAGSIAQRICLRLPSVNFYAIAERCLKDLSLPVDKILP 337

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN +  PTR CVM+IL+V +R+LYNI GQG WE+ + + RNA 
Sbjct: 338  HACRIYEWAMPAELWLSSNPARVPTRVCVMAILLVTLRVLYNINGQGIWEICE-ERRNAG 396

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P A++     +      DD+                    + ++  RELL  +
Sbjct: 397  GSD----PDANSPTFRML------DDS-------------------NSEEFGMRELLCAI 427

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDNAGE 435
             A YDKIN  HDYS+D+ SYLKYC DV++ G+T S EE+ L+E  WDMY+  EDDN  E
Sbjct: 428  AAAYDKINVVHDYSSDLCSYLKYCNDVIFTGITCSTEEEHLVEIFWDMYKAGEDDNPKE 486



 Score = 91.3 bits (225), Expect(2) = 2e-77
 Identities = 45/85 (52%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = -3

Query: 328 AIEKIKLEMEENGFEYLPPRLHQKV-GYVHYRRQRIDGKLVCVAHADYYILLRVCAKLAE 152
           A++ +K EM+++GF Y+PPR  +K  GY+ YRR+R+ G  V VAHADYY+LLR  +KLAE
Sbjct: 527 AVQMLKSEMQDHGFHYMPPRKPRKSDGYLRYRRRRLSGGFVYVAHADYYMLLRAFSKLAE 586

Query: 151 VDVKTMHRCVLSLERRLEWIDKQID 77
           V+V+ MH  VL LE RL  I+ +I+
Sbjct: 587 VNVRIMHISVLKLESRLACIEDRIE 611


>gb|PNT76985.1| hypothetical protein BRADI_1g56620v3 [Brachypodium distachyon]
          Length = 584

 Score =  221 bits (563), Expect(2) = 1e-76
 Identities = 120/242 (49%), Positives = 148/242 (61%)
 Frame = -2

Query: 1169 LGNPCTCPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLP 990
            LG+   CPL ++ LFRP  VIG  QLEA A SIAQ IGL LPSVNFYA+A RYL E+ LP
Sbjct: 241  LGSALKCPLDARQLFRPVRVIGTWQLEAAAGSIAQRIGLRLPSVNFYAIAQRYLNELSLP 300

Query: 989  VEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKL 810
            VE+IL HACHIYEW++P +LWLSSNS   PTR  VM+ILIV++R LYNI GQG WE+ + 
Sbjct: 301  VERILPHACHIYEWAMPAELWLSSNSDRIPTRVYVMAILIVSLRFLYNINGQGIWEICEA 360

Query: 809  DVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCR 630
             +    S+        D  +L SM          K +C              + + +  +
Sbjct: 361  GITAGGSD-------PDANSLPSM----------KPEC--------------RTNAFGTK 389

Query: 629  ELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQED 450
            ELL  L    DKI+  HDYS D+ SYLKYCKDV++ G+  S EE  LIE   DMY+  ED
Sbjct: 390  ELLCTLAEACDKIDVGHDYSKDLRSYLKYCKDVVFPGIAYSVEEAHLIEIFHDMYKAGED 449

Query: 449  DN 444
            DN
Sbjct: 450  DN 451



 Score = 95.9 bits (237), Expect(2) = 1e-76
 Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = -3

Query: 364 TLPNCRTSIINAAIEKIKLEMEENGFEYLPP-RLHQKVGYVHYRRQRIDGKLVCVAHADY 188
           T    R    ++ I++IK EME++GF Y+PP R  +   Y+HYRR+ + G LV V+HADY
Sbjct: 473 TFVGARRFSTSSGIQRIKSEMEDHGFCYMPPGRGLRSDNYLHYRRKTVSGSLVSVSHADY 532

Query: 187 YILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           YIL+R  AKLAEVD++ +H  VL LERRL  I+K+I
Sbjct: 533 YILIRAFAKLAEVDIRIIHASVLKLERRLASIEKRI 568


>ref|XP_006655219.2| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B, partial [Oryza brachyantha]
          Length = 589

 Score =  219 bits (558), Expect(2) = 3e-76
 Identities = 111/237 (46%), Positives = 152/237 (64%)
 Frame = -2

Query: 1151 CPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLPVEKILR 972
            C L S+ LFRP  VIGA QLEA A SIA+ IGL LPSVNFY++A R+LK + LP+EKIL 
Sbjct: 241  CSLDSRQLFRPTRVIGAWQLEAAAGSIAERIGLLLPSVNFYSIAQRFLKVLSLPIEKILP 300

Query: 971  HACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKLDVRNAS 792
            HAC IYEW++P +LWLSSN +  PTR CVM+ILIV++R+LY I GQG WE S      A 
Sbjct: 301  HACRIYEWAMPAELWLSSNPARVPTRICVMAILIVSLRVLYGINGQGIWE-SIAQTETAD 359

Query: 791  SNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCRELLSIL 612
             +D    P        S++ D  ++++                      +++ RELL  L
Sbjct: 360  GSDSEGSPP------HSLKPDNSSNEH---------------------KEFDARELLCTL 392

Query: 611  EATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQEDDNA 441
              ++DKI+  HDYS ++ SYLKYCK+V++ G+T S EE+ +++  WDMY+ +ED+NA
Sbjct: 393  ATSHDKIDVGHDYSKELHSYLKYCKEVIFTGITFSLEEEHIVDIFWDMYKGKEDENA 449



 Score = 96.7 bits (239), Expect(2) = 3e-76
 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = -3

Query: 334 NAAIEKIKLEMEENGFEYLPPRLHQ-KVGYVHYRRQRIDGKLVCVAHADYYILLRVCAKL 158
           N+A++ IK EMEENGF Y+PPR      GY+HYRR+ + G L  V HADYYILLR  AKL
Sbjct: 483 NSALQSIKSEMEENGFCYMPPRKRLFSDGYLHYRRKVLYGSLNYVVHADYYILLRSFAKL 542

Query: 157 AEVDVKTMHRCVLSLERRLEWIDKQI 80
           AEVDV+ +H  VL LERRL  I+++I
Sbjct: 543 AEVDVRILHNGVLKLERRLALIEERI 568


>ref|XP_010228327.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X1 [Brachypodium distachyon]
 ref|XP_010228328.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X1 [Brachypodium distachyon]
 gb|KQK20750.1| hypothetical protein BRADI_1g56620v3 [Brachypodium distachyon]
          Length = 625

 Score =  219 bits (558), Expect(2) = 4e-76
 Identities = 122/242 (50%), Positives = 148/242 (61%)
 Frame = -2

Query: 1169 LGNPCTCPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLP 990
            LG+   CPL ++ LFRP  VIG  QLEA A SIAQ IGL LPSVNFYA+A RYL E+ LP
Sbjct: 281  LGSALKCPLDARQLFRPVRVIGTWQLEAAAGSIAQRIGLRLPSVNFYAIAQRYLNELSLP 340

Query: 989  VEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKL 810
            VE+IL HACHIYEW++P +LWLSSNS   PTR  VM+ILIV++R LYNI GQG WE    
Sbjct: 341  VERILPHACHIYEWAMPAELWLSSNSDRIPTRVYVMAILIVSLRFLYNINGQGIWE---- 396

Query: 809  DVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCR 630
            ++  A      S P  D  +L SM          K +C              + + +  +
Sbjct: 397  EICEAGITAGGSDP--DANSLPSM----------KPEC--------------RTNAFGTK 430

Query: 629  ELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQED 450
            ELL  L    DKI+  HDYS D+ SYLKYCKDV++ G+  S EE  LIE   DMY+  ED
Sbjct: 431  ELLCTLAEACDKIDVGHDYSKDLRSYLKYCKDVVFPGIAYSVEEAHLIEIFHDMYKAGED 490

Query: 449  DN 444
            DN
Sbjct: 491  DN 492



 Score = 95.9 bits (237), Expect(2) = 4e-76
 Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = -3

Query: 364 TLPNCRTSIINAAIEKIKLEMEENGFEYLPP-RLHQKVGYVHYRRQRIDGKLVCVAHADY 188
           T    R    ++ I++IK EME++GF Y+PP R  +   Y+HYRR+ + G LV V+HADY
Sbjct: 514 TFVGARRFSTSSGIQRIKSEMEDHGFCYMPPGRGLRSDNYLHYRRKTVSGSLVSVSHADY 573

Query: 187 YILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           YIL+R  AKLAEVD++ +H  VL LERRL  I+K+I
Sbjct: 574 YILIRAFAKLAEVDIRIIHASVLKLERRLASIEKRI 609


>ref|XP_014753417.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X2 [Brachypodium distachyon]
 gb|PNT76986.1| hypothetical protein BRADI_1g56620v3 [Brachypodium distachyon]
          Length = 585

 Score =  219 bits (558), Expect(2) = 4e-76
 Identities = 122/242 (50%), Positives = 148/242 (61%)
 Frame = -2

Query: 1169 LGNPCTCPLSSKALFRPYNVIGADQLEATAASIAQTIGLCLPSVNFYAVAHRYLKEMYLP 990
            LG+   CPL ++ LFRP  VIG  QLEA A SIAQ IGL LPSVNFYA+A RYL E+ LP
Sbjct: 241  LGSALKCPLDARQLFRPVRVIGTWQLEAAAGSIAQRIGLRLPSVNFYAIAQRYLNELSLP 300

Query: 989  VEKILRHACHIYEWSLPTDLWLSSNSSGCPTRACVMSILIVAMRLLYNIQGQGTWEMSKL 810
            VE+IL HACHIYEW++P +LWLSSNS   PTR  VM+ILIV++R LYNI GQG WE    
Sbjct: 301  VERILPHACHIYEWAMPAELWLSSNSDRIPTRVYVMAILIVSLRFLYNINGQGIWE---- 356

Query: 809  DVRNASSNDQTSHPTADTANLSSMQKDEYADDNAKRQCNALGSRPDKKLLRIQASDYNCR 630
            ++  A      S P  D  +L SM          K +C              + + +  +
Sbjct: 357  EICEAGITAGGSDP--DANSLPSM----------KPEC--------------RTNAFGTK 390

Query: 629  ELLSILEATYDKINTAHDYSNDMSSYLKYCKDVLYAGLTKSYEEKKLIERLWDMYEKQED 450
            ELL  L    DKI+  HDYS D+ SYLKYCKDV++ G+  S EE  LIE   DMY+  ED
Sbjct: 391  ELLCTLAEACDKIDVGHDYSKDLRSYLKYCKDVVFPGIAYSVEEAHLIEIFHDMYKAGED 450

Query: 449  DN 444
            DN
Sbjct: 451  DN 452



 Score = 95.9 bits (237), Expect(2) = 4e-76
 Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = -3

Query: 364 TLPNCRTSIINAAIEKIKLEMEENGFEYLPP-RLHQKVGYVHYRRQRIDGKLVCVAHADY 188
           T    R    ++ I++IK EME++GF Y+PP R  +   Y+HYRR+ + G LV V+HADY
Sbjct: 474 TFVGARRFSTSSGIQRIKSEMEDHGFCYMPPGRGLRSDNYLHYRRKTVSGSLVSVSHADY 533

Query: 187 YILLRVCAKLAEVDVKTMHRCVLSLERRLEWIDKQI 80
           YIL+R  AKLAEVD++ +H  VL LERRL  I+K+I
Sbjct: 534 YILIRAFAKLAEVDIRIIHASVLKLERRLASIEKRI 569