BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00018203
         (1790 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   481   e-170
gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposo...   483   e-161
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   430   e-155
gb|KZV39555.1| hypothetical protein F511_13790, partial [Dorcoce...   433   e-146
gb|KZV51625.1| hypothetical protein F511_24998 [Dorcoceras hygro...   433   e-146
gb|KZV50107.1| hypothetical protein F511_31489, partial [Dorcoce...   432   e-145
gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygro...   424   e-145
gb|KZV17034.1| hypothetical protein F511_34284 [Dorcoceras hygro...   423   e-143
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   442   e-142
gb|KZV31144.1| hypothetical protein F511_24590 [Dorcoceras hygro...   415   e-142
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   402   e-141
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   402   e-141
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   402   e-141
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     402   e-141
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc...   400   e-140
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   400   e-140
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   400   e-140
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   400   e-140
gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group...   402   e-140
dbj|BAB03249.1| polyprotein [Oryza sativa]                            402   e-140

>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 880

 Score =  481 bits (1239), Expect(2) = e-170
 Identities = 240/431 (55%), Positives = 314/431 (72%), Gaps = 9/431 (2%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNV------KHSSISAPIALNIEPSVTWHQRLRHAN 685
            SN+V            ++ +GLFKL++      K+SSIS+    N+E    WH RL H N
Sbjct: 304  SNRVVISRHGSFVGKGYICDGLFKLSIMSSFINKNSSISSSSISNVECCDIWHGRLGHVN 363

Query: 686  YNSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFK-TIDRDSEILELIHSDVCDS-G 859
             NSIKR++ L+LIPK   +   KCE+CV+AK P+K F+ ++ +++ +LELIHSD+CDS G
Sbjct: 364  LNSIKRMMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNG 423

Query: 860  RTSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGG 1039
              +RGG KYF+TFIDD SKYC++YLI  K E+  KFKVYKAEVENQ+E++IKILRSDRGG
Sbjct: 424  VITRGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGG 483

Query: 1040 EYTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEA 1219
            EY+SNE+ +F E +GIIHE+T PY PQSNG+AERKNRTL+DM+N+MLI+SG+P+NLWGEA
Sbjct: 484  EYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWGEA 543

Query: 1220 LMTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDG 1399
            L TAC+ILNRIP+KNSDKTPY +WKNR  NL+YLKVWGCLAKV IP NK++KIG KTVD 
Sbjct: 544  LFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIPINKKRKIGPKTVDC 603

Query: 1400 IFIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXX 1579
            +F+GY+  S   RFL+I SE+++I+NN I+E+RDA +FENIFP K ++            
Sbjct: 604  VFLGYSLHSTTYRFLVIKSEVSEISNNIIMESRDAIFFENIFPLKNKLSKPVYDTSSSIL 663

Query: 1580 XXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEI 1756
                      E R SKR R  K     FY+ L+E+ P ++ +AM+ VD+PFWKEAIN+EI
Sbjct: 664  PSSSTVNKDFETRISKRIRKAKDFGPGFYSFLLENDPKTYSEAMRYVDAPFWKEAINDEI 723

Query: 1757 QSIVQNQTWEL 1789
             S+  N+TW L
Sbjct: 724  DSLKINKTWFL 734



 Score =  148 bits (373), Expect(2) = e-170
 Identities = 66/149 (44%), Positives = 99/149 (66%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCGR NH AKDC++++                Q N++T+   S   + R  + +PE+N 
Sbjct: 152 FVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNRYHVTSPELNF 211

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            + +NDWWID+GAN+HVC+D+ LFS+YQ     TV+MGN  +A V+G+G++ L+L+S   
Sbjct: 212 IYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGRVELELSSGNC 271

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           L L +V HV +IR+NLIS +LLVQQG+K+
Sbjct: 272 LVLDEVFHVSEIRKNLISAALLVQQGFKV 300


>gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 565

 Score =  483 bits (1242), Expect = e-161
 Identities = 236/398 (59%), Positives = 303/398 (76%), Gaps = 3/398 (0%)
 Frame = +2

Query: 605  KHSSISAPIALNIEPSVTWHQRLRHANYNSIKRLIQLNLIPKFNVKDHDKCEICVEAKLP 784
            K+SSIS+    N+E    WH RL H N NSIKR++ L+LIPK   +   KCE+CV+AK P
Sbjct: 7    KNSSISSSSISNVECCDIWHGRLGHVNLNSIKRMMTLDLIPKSFNELKQKCEVCVQAKQP 66

Query: 785  KKPFK-TIDRDSEILELIHSDVCDS-GRTSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVI 958
            +K F+ ++ +++ +LELIHSD+CDS G  +RGG KYF+TFIDD SKYC++YLI  K E+ 
Sbjct: 67   RKSFQNSVQKETCVLELIHSDICDSNGVITRGGKKYFITFIDDFSKYCYVYLIIHKSELF 126

Query: 959  NKFKVYKAEVENQVEKTIKILRSDRGGEYTSNELKQFCEDNGIIHEMTAPYTPQSNGVAE 1138
             KFKVYKAEVENQ+EK+IKILRSDRGGEY+SNE+ +F E +GIIHE+T PY PQSNG+AE
Sbjct: 127  EKFKVYKAEVENQLEKSIKILRSDRGGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAE 186

Query: 1139 RKNRTLMDMVNSMLINSGVPENLWGEALMTACYILNRIPFKNSDKTPYTIWKNRNLNLEY 1318
            RKNRTL+DM+N+MLI+SG+P+NLWGEAL TAC+ILNRIP+KNSDKTPY +WKNR  NL+Y
Sbjct: 187  RKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKY 246

Query: 1319 LKVWGCLAKVKIPENKRKKIGRKTVDGIFIGYAFDSNANRFLIINSEINDIANNTIVEAR 1498
            LKVWGCLAKV IP NK++KIG KTVD +F+GY+  S   RFL+INSE+++I+NN I+E+R
Sbjct: 247  LKVWGCLAKVNIPINKKRKIGPKTVDCVFLGYSLHSTTYRFLVINSEVSEISNNIIMESR 306

Query: 1499 DAYYFENIFPYKTRIGXXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLV 1675
            DA +FENIFP K ++                      E R SKR R  K    +FY+ L+
Sbjct: 307  DAVFFENIFPLKNKLSKPVYDTSSSVLPSSSTVNKDFEPRISKRIRKAKDFGPEFYSFLL 366

Query: 1676 EDSPTSFKDAMKSVDSPFWKEAINNEIQSIVQNQTWEL 1789
            ED P ++ +AM+SVD+PFWKEAIN+EI S+  N+TW L
Sbjct: 367  EDDPKTYSEAMRSVDAPFWKEAINDEIDSLKINKTWFL 404


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 714

 Score =  430 bits (1106), Expect(2) = e-155
 Identities = 215/382 (56%), Positives = 278/382 (72%), Gaps = 8/382 (2%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNV------KHSSISAPIALNIEPSVTWHQRLRHAN 685
            SN+V            ++ +GLFKL++      K+SSIS+    N+E    WH RL H N
Sbjct: 302  SNRVVISRHGSFVGKGYICDGLFKLSIMSSFINKNSSISSSSISNVECCDIWHGRLGHVN 361

Query: 686  YNSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFK-TIDRDSEILELIHSDVCDS-G 859
             NSIKR++ L+LIPK   +   KCE+CV+AK P+K F+ ++ +++ +LELIHSD+CDS G
Sbjct: 362  LNSIKRMMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNG 421

Query: 860  RTSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGG 1039
              +RGG KYF+TFIDD SKYC++YLI  K E+  KFKVYKAEVENQ+E++IKILRSDRGG
Sbjct: 422  VITRGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGG 481

Query: 1040 EYTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEA 1219
            EY+SNE+ +F E +GIIHE+T PY PQSNG+AERKNRTL+DM+N+MLI+SG+P+NLWGEA
Sbjct: 482  EYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWGEA 541

Query: 1220 LMTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDG 1399
            L TAC+ILNRIP+KNSDKTPY +WKNR  NL+YLKVW CLAKV IP NK++KIG KTVD 
Sbjct: 542  LFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWWCLAKVNIPINKKRKIGPKTVDC 601

Query: 1400 IFIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXX 1579
            +F+GY+  S   RFL+INSE+++I+NN I+E+RD  +FENIFP K ++            
Sbjct: 602  VFLGYSLHSTTYRFLVINSEVSEISNNIIMESRDVVFFENIFPLKNKLSKPVYNTSSSVL 661

Query: 1580 XXXQEEETQIEVRRSKRARVEK 1645
                      E R SKR R  K
Sbjct: 662  SSSSIVNKDFEPRISKRIRKAK 683



 Score =  148 bits (373), Expect(2) = e-155
 Identities = 66/149 (44%), Positives = 99/149 (66%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCGR NH AKDC++++                Q N++T+   S   + R  + +PE+N 
Sbjct: 150 FVCGRNNHFAKDCFHRRRQPKDITSDPKSSSQPQANVITANASSDSPSNRYHVTSPELNF 209

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            + +NDWWID+GAN+HVC+D+ LFS+YQ     TV+MGN  +A V+G+G++ L+L+S   
Sbjct: 210 IYNSNDWWIDSGANVHVCADKKLFSSYQECGTRTVSMGNGSLARVIGLGRVELELSSGNC 269

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           L L +V HV +IR+NLIS +LLVQQG+K+
Sbjct: 270 LVLDEVFHVSEIRKNLISAALLVQQGFKV 298


>gb|KZV39555.1| hypothetical protein F511_13790, partial [Dorcoceras hygrometricum]
          Length = 1165

 Score =  433 bits (1113), Expect(2) = e-146
 Identities = 214/416 (51%), Positives = 296/416 (71%), Gaps = 10/416 (2%)
 Frame = +2

Query: 572  FMNNGLFKLNVKHSSISAPIALN--------IEPSVTWHQRLRHANYNSIKRLIQLNLIP 727
            + +NGLFKLNV +  +  P A N        IE S  WH+RL H N+N+++RL  LN++P
Sbjct: 381  YQHNGLFKLNVMN--VIRPEAKNKINNSSYLIEISNLWHERLGHVNFNTLQRLANLNVLP 438

Query: 728  KFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGRT-SRGGNKYFVTFID 904
             F     +KCEICVE KL K PF ++ R ++ LELIH+DVCD     +RGG +YF+TFID
Sbjct: 439  AFKRNPQEKCEICVETKLAKAPFHSVTRSTKPLELIHTDVCDLKLVQTRGGKRYFITFID 498

Query: 905  DCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEYTSNELKQFCEDNG 1084
            DC++YC++YL+++KDE I  F  YK EVENQ+   IK++RSDRGGEY +   ++FC ++G
Sbjct: 499  DCTRYCYVYLLRSKDEAIEAFTKYKNEVENQLTSKIKMIRSDRGGEYVA-PFEEFCSNSG 557

Query: 1085 IIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALMTACYILNRIPFKN 1264
            IIH+ TAPY+PQSNGVAERKNRTL +M+N++L NSG+P+NLWGEA++TA +ILN+IP K 
Sbjct: 558  IIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGLPQNLWGEAILTANHILNKIPHKG 617

Query: 1265 SDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIFIGYAFDSNANRFL 1444
             ++TPY +WK R  + +YLKVWGCLAKV+IP+ K+ KIG KT+D +FIGYA +S+A RFL
Sbjct: 618  KNETPYELWKGRKPSYKYLKVWGCLAKVEIPKPKQVKIGPKTIDCVFIGYALNSSAYRFL 677

Query: 1445 IINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXXXXXQEEETQIEVRRS 1624
            +  SEI+DI+  TI+E+R+A +FE  FP K +                +  ET  E RRS
Sbjct: 678  VHKSEISDISEGTILESRNAVFFEYKFPCKEK---KESSTKSAYEITIESSETNDEPRRS 734

Query: 1625 KRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEIQSIVQNQTWEL 1789
            KRAR+EK    +F   +++D P + ++A+ + ++PFWKEAI +EI SI+ N TWEL
Sbjct: 735  KRARIEKSFGPEFLTYILDDEPQTIQEALSNPEAPFWKEAIQDEIDSIMHNHTWEL 790



 Score =  117 bits (292), Expect(2) = e-146
 Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = +1

Query: 91  TIYVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSG---VGSSETAFRSVLFT 261
           T Y CG+ NH+AKDC   K                Q N+V      +  SE    +V+F 
Sbjct: 218 TCYNCGKPNHMAKDCRLPKK--------DKSQNRGQANVVQDRSVPIDLSEIDLSAVVF- 268

Query: 262 PEVNMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKL 441
            E N+     +WW+DTGA  H+CS++ +FS+Y   S   + MGN+  + V+GIG + LK+
Sbjct: 269 -EANLVDNPREWWVDTGATSHICSEKGMFSSYTAVSDRKLYMGNSTTSDVVGIGNVVLKM 327

Query: 442 TSEKTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           TS K + L++V HVPDIR+NL+SGSLL + G++L
Sbjct: 328 TSGKEVNLKNVLHVPDIRKNLVSGSLLSKAGFRL 361


>gb|KZV51625.1| hypothetical protein F511_24998 [Dorcoceras hygrometricum]
          Length = 1328

 Score =  433 bits (1113), Expect(2) = e-146
 Identities = 214/416 (51%), Positives = 296/416 (71%), Gaps = 10/416 (2%)
 Frame = +2

Query: 572  FMNNGLFKLNVKHSSISAPIALN--------IEPSVTWHQRLRHANYNSIKRLIQLNLIP 727
            + +NGLFKLNV +  +  P A N        IE S  WH+RL H N+N+++RL  LN++P
Sbjct: 413  YQHNGLFKLNVMN--VIRPEAKNKINNSSYLIEISNLWHERLGHVNFNTLQRLANLNVLP 470

Query: 728  KFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGRT-SRGGNKYFVTFID 904
             F     +KCEICVE KL K PF ++ R ++ LELIH+DVCD     +RGG +YF+TFID
Sbjct: 471  AFKRNPQEKCEICVETKLAKAPFHSVTRSTKPLELIHTDVCDLKLVQTRGGKRYFITFID 530

Query: 905  DCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEYTSNELKQFCEDNG 1084
            DC++YC++YL+++KDE I  F  YK EVENQ+   IK++RSDRGGEY +   ++FC ++G
Sbjct: 531  DCTRYCYVYLLRSKDEAIEAFTKYKNEVENQLTSKIKMIRSDRGGEYVA-PFEEFCSNSG 589

Query: 1085 IIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALMTACYILNRIPFKN 1264
            IIH+ TAPY+PQSNGVAERKNRTL +M+N++L NSG+P+NLWGEA++TA +ILN+IP K 
Sbjct: 590  IIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGLPQNLWGEAILTANHILNKIPHKG 649

Query: 1265 SDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIFIGYAFDSNANRFL 1444
             ++TPY +WK R  + +YLKVWGCLAKV+IP+ K+ KIG KT+D +FIGYA +S+A RFL
Sbjct: 650  KNETPYELWKGRKPSYKYLKVWGCLAKVEIPKPKQVKIGPKTIDCVFIGYALNSSAYRFL 709

Query: 1445 IINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXXXXXQEEETQIEVRRS 1624
            +  SEI+DI+  TI+E+R+A +FE  FP K +                +  ET  E RRS
Sbjct: 710  VHKSEISDISEGTILESRNAVFFEYKFPCKEK---KESSTKSAYEITIESSETNDEPRRS 766

Query: 1625 KRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEIQSIVQNQTWEL 1789
            KRAR+EK    +F   +++D P + ++A+ + ++PFWKEAI +EI SI+ N TWEL
Sbjct: 767  KRARIEKSFGPEFLTYILDDEPQTIQEALSNPEAPFWKEAIQDEIDSIMHNHTWEL 822



 Score =  116 bits (291), Expect(2) = e-146
 Identities = 59/151 (39%), Positives = 85/151 (56%)
 Frame = +1

Query: 91  TIYVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEV 270
           T Y CG+ NH+AKDC   K                 V +  S +  S   F       E 
Sbjct: 250 TCYNCGKPNHMAKDCRLPKKDKSQNRGQANVVQDRSVPIDLSKIDLSTVVF-------ET 302

Query: 271 NMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSE 450
           N+     +WW+DTGA  H+CS++ +FS+Y   S   + MGN+  + V+GIG + LK+TS 
Sbjct: 303 NLVDNPREWWVDTGATSHICSEKGMFSSYTAVSDRKLYMGNSTTSDVVGIGNVVLKMTSG 362

Query: 451 KTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           K + L++V HVPDIR+NL+SGSLL + G++L
Sbjct: 363 KEVNLKNVLHVPDIRKNLVSGSLLSKAGFRL 393


>gb|KZV50107.1| hypothetical protein F511_31489, partial [Dorcoceras hygrometricum]
          Length = 912

 Score =  432 bits (1110), Expect(2) = e-145
 Identities = 214/416 (51%), Positives = 295/416 (70%), Gaps = 10/416 (2%)
 Frame = +2

Query: 572  FMNNGLFKLNVKHSSISAPIALN--------IEPSVTWHQRLRHANYNSIKRLIQLNLIP 727
            + +NGLFKLNV +  +  P A N        IE S  WH+RL H N+N+++RL  LN++P
Sbjct: 352  YQHNGLFKLNVMN--VIRPEAKNKINNSSYLIEISNLWHERLGHVNFNTLQRLANLNVLP 409

Query: 728  KFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGRT-SRGGNKYFVTFID 904
             F     +KCEICVE KL K PF ++ R ++ LELIH+DVCD     +RGG +YF+TFID
Sbjct: 410  AFKRNPQEKCEICVETKLAKAPFHSVTRSTKPLELIHTDVCDLKLVQTRGGKRYFITFID 469

Query: 905  DCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEYTSNELKQFCEDNG 1084
            DC++YC++YL+++K E I  F  YK EVENQ+   IK++RSDRGGEY +   ++FC ++G
Sbjct: 470  DCTRYCYVYLLRSKVEAIEAFTKYKNEVENQLTSKIKMIRSDRGGEYVA-PFEEFCSNSG 528

Query: 1085 IIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALMTACYILNRIPFKN 1264
            IIH+ TAPY+PQSNGVAERKNRTL +M+N++L NSG+P+NLWGEA++TA +ILN+IP K 
Sbjct: 529  IIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGLPQNLWGEAILTANHILNKIPHKG 588

Query: 1265 SDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIFIGYAFDSNANRFL 1444
             D+TPY +WK R  + +YLKVWGCLAKV+IP+ K+ KIG KT+D +FIGYA +S+A RFL
Sbjct: 589  KDETPYELWKGRKSSYKYLKVWGCLAKVEIPKPKQVKIGPKTIDCVFIGYALNSSAYRFL 648

Query: 1445 IINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXXXXXQEEETQIEVRRS 1624
            +  SEI+DI+  TI+E+R+A +FE  FP K +                +  ET  E RRS
Sbjct: 649  VHKSEISDISEGTILESRNAVFFEYKFPCKEK---KESSTKSAYEITIESSETNDEPRRS 705

Query: 1625 KRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEIQSIVQNQTWEL 1789
            KRAR+EK    +F   +++D P + ++A+ + ++PFWKEAI +EI SI+ N TWEL
Sbjct: 706  KRARIEKSFGPEFLTYILDDEPQTIQEALSNPEAPFWKEAIQDEIDSIMHNHTWEL 761



 Score =  115 bits (287), Expect(2) = e-145
 Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSG---VGSSETAFRSVLFTPE 267
           Y CG+ NH+AKDC   K                Q N+V      +  SE    +V+F  E
Sbjct: 191 YNCGKPNHMAKDCRLLKK--------DKSQNRGQANVVQDRSVPIDLSEIDLSAVVF--E 240

Query: 268 VNMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTS 447
            N+     +WW+DTGA  H+CS++ +FS+Y   S   + MGN+  + V+GIG + LK+TS
Sbjct: 241 ANLVDNPREWWVDTGATSHICSEKGMFSSYTAVSDRKLYMGNSTTSDVVGIGNVVLKMTS 300

Query: 448 EKTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
            K + L++V HVPDIR+NL+SGSLL + G++L
Sbjct: 301 GKEVNLKNVLHVPDIRKNLVSGSLLSKAGFRL 332


>gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygrometricum]
          Length = 979

 Score =  424 bits (1090), Expect(2) = e-145
 Identities = 216/446 (48%), Positives = 298/446 (66%), Gaps = 24/446 (5%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVKH-------SSISAPIALNIEPSVTWHQRLRHA 682
            SNK             ++ + LFK+NV         + I A   + +E S  WH RL H 
Sbjct: 394  SNKFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYI-VECSNLWHGRLGHV 452

Query: 683  NYNSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGR 862
            NYN++KRL++LNL+P  ++    KCE+CVEAK+ K PF +++R +  LELIHSD+CD   
Sbjct: 453  NYNTLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVERSTTPLELIHSDICDLKF 512

Query: 863  T-SRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGG 1039
              +RGG KYFVTFIDDC++YC++YL++ KDE +  F+ YKAEVENQ+++ IK +RSDRGG
Sbjct: 513  VQTRGGKKYFVTFIDDCTRYCYVYLLRGKDEALEAFQNYKAEVENQLDQRIKNIRSDRGG 572

Query: 1040 EYTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEA 1219
            EY +     +C  +GIIH+ TAPY+PQSNGVAERKNRTL +M+N++LINSG+P+NLWGEA
Sbjct: 573  EYGA-PFDDYCVKSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLINSGLPQNLWGEA 631

Query: 1220 LMTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDG 1399
            +++A +ILN+IP K  DKTPY +WK    + +YLKVWGCLAKV++P+ K+ KIG KT DG
Sbjct: 632  ILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQVKIGPKTFDG 691

Query: 1400 IFIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXX 1579
            IFIGYA +S+A RFL+  S+I  I  +T +E+R+A +FEN+FP K               
Sbjct: 692  IFIGYANNSSAYRFLVHKSDIPSIHEDTTIESRNAIFFENVFPRKEGNNKERNEIQRNEG 751

Query: 1580 XXXQE---------------EETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMK 1711
                E               ++   E RRSKRAR+EK    DF + ++E+ P + K+A+ 
Sbjct: 752  SNENEKSEPSCNKRSIEDVDDQDHDEPRRSKRARIEKSFGPDFISYVLENEPRTLKEALS 811

Query: 1712 SVDSPFWKEAINNEIQSIVQNQTWEL 1789
            S D+P WKEA+N+EI+SI+ N TWEL
Sbjct: 812  SPDAPLWKEAVNSEIESIMHNHTWEL 837



 Score =  122 bits (306), Expect(2) = e-145
 Identities = 65/151 (43%), Positives = 89/151 (58%)
 Frame = +1

Query: 91  TIYVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEV 270
           T Y CG+ NH+AKDC   K A                ++ TS V   E    +V F  E 
Sbjct: 247 TCYNCGKPNHMAKDCRRPKKAKKEQQGKDVAN-----HLTTSNVVDMEMDLAAVTF--EA 299

Query: 271 NMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSE 450
           NM      WW+DTGA  H+CS++++FSTY   +G  + MGN+  + V GIG++ LK+TS 
Sbjct: 300 NMVDNPRQWWVDTGATRHICSEKAMFSTYVSVTGRKLFMGNSASSDVAGIGKVVLKMTSR 359

Query: 451 KTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           K L L DV HVP+IR+NL+SGS LV+ G++L
Sbjct: 360 KELALIDVLHVPEIRKNLVSGSALVKAGFRL 390


>gb|KZV17034.1| hypothetical protein F511_34284 [Dorcoceras hygrometricum]
          Length = 831

 Score =  423 bits (1088), Expect(2) = e-143
 Identities = 212/416 (50%), Positives = 292/416 (70%), Gaps = 10/416 (2%)
 Frame = +2

Query: 572  FMNNGLFKLNVKHSSISAPIALN--------IEPSVTWHQRLRHANYNSIKRLIQLNLIP 727
            + +NGLFKLNV +  +  P A N        IE S  WH+RL H N+N ++RL  LN++P
Sbjct: 380  YQHNGLFKLNVMN--VIRPEAKNKINNSFYLIEISNLWHERLGHVNFNMLQRLDNLNVLP 437

Query: 728  KFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGRT-SRGGNKYFVTFID 904
             F     +KCEICVE KL K PF ++ R ++ LELIH+DVCD     SRGG +YF+TFID
Sbjct: 438  AFKRNPQEKCEICVETKLAKAPFHSVTRSTKPLELIHTDVCDLKLVQSRGGKRYFITFID 497

Query: 905  DCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEYTSNELKQFCEDNG 1084
            DC++YC++YL+++KDE I  F  YK EVENQ+   IK++RSDRGGEY +   ++FC ++G
Sbjct: 498  DCTRYCYIYLLRSKDEAIEAFTKYKNEVENQLTSKIKMIRSDRGGEYVA-PFEEFCSNSG 556

Query: 1085 IIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALMTACYILNRIPFKN 1264
            IIH+ TAPY+PQSNGVAERKNRTL +M+N++L NSG+P+NLW EA++TA +ILN+IP K 
Sbjct: 557  IIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGLPQNLWVEAILTANHILNKIPHKG 616

Query: 1265 SDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIFIGYAFDSNANRFL 1444
             D+TPY +WK R  + +YLKVWGCLAKV++P+ K+ KIG KT+D +FIGYA +S+A RFL
Sbjct: 617  KDETPYELWKGRKPSYKYLKVWGCLAKVEVPKLKQVKIGPKTIDCVFIGYALNSSAYRFL 676

Query: 1445 IINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXXXXXQEEETQIEVRRS 1624
            +  +EI+DI+  TI+E+R+A  FE  FP K +                +  ET  E RRS
Sbjct: 677  VHKTEISDISEGTILESRNAVLFEYKFPCKEK---KESSTKRAYETTIESSETNDEPRRS 733

Query: 1625 KRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEIQSIVQNQTWEL 1789
            KRAR+EK    +F   +++D P + ++A+ + ++ FWKEAI +EI SI+ N TWEL
Sbjct: 734  KRARIEKSFGPEFITYILDDEPQTIQEALSNPEAHFWKEAILDEIDSIMHNHTWEL 789



 Score =  117 bits (293), Expect(2) = e-143
 Identities = 59/151 (39%), Positives = 85/151 (56%)
 Frame = +1

Query: 91  TIYVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEV 270
           T Y CG+ NH+AKDC   K+                V +  S +  S   F       E 
Sbjct: 217 TCYNCGKPNHMAKDCRLPKNGKSQNRGQANVVQDRSVPIDLSEIDLSAVVF-------EA 269

Query: 271 NMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSE 450
           N+     +WW+DTGA  H+CS++ +FS+Y   S   + MGN+  + V+GIG + LK+TS 
Sbjct: 270 NLVDNPREWWVDTGATSHICSEKGMFSSYTAVSDRKLYMGNSTTSDVVGIGNVVLKMTSG 329

Query: 451 KTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           K + L+DV HVPDIR+NL+SGS L + G++L
Sbjct: 330 KEVNLKDVLHVPDIRKNLVSGSQLSKAGFRL 360


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  442 bits (1136), Expect(2) = e-142
 Identities = 219/429 (51%), Positives = 298/429 (69%), Gaps = 7/429 (1%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNV-----KHSSISAPIALNIEPSVTWHQRLRHANY 688
            SNKV            +M++G++KLNV      + + ++     +E S  WH RL H NY
Sbjct: 423  SNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNY 482

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGRT- 865
            ++++RLI LN IP F +  + KCE CVEAKL +  F++++R++E L+LIHSD+CD     
Sbjct: 483  DTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQ 542

Query: 866  SRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEY 1045
            +RGGNKYF+TF+DD +KYC++YL+K+KDE I KF +YK EVENQ+ K IK+LRSDRGGEY
Sbjct: 543  TRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEY 602

Query: 1046 TSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALM 1225
             S      C  +GIIHE TAPY+PQSNGVAERKNRTL +M+N+MLI+S +P+N+WGEA++
Sbjct: 603  ES-PFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAIL 661

Query: 1226 TACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIF 1405
            TA Y+LN++P K ++KTPY +WK R  +  YL++WGCLAKV +P  K+ KIG KT+D IF
Sbjct: 662  TANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIF 721

Query: 1406 IGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXXXX 1585
            IGYA +SNA RFL+  S I DI  NTI+E+R+A +FE++FP K++               
Sbjct: 722  IGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSK--EEPSSSKRMLESQ 779

Query: 1586 XQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSPFWKEAINNEIQS 1762
             Q EE ++E RRSKR R EK    DF   ++E  P +FK+A+ S +   WKEAI +EI S
Sbjct: 780  DQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDS 839

Query: 1763 IVQNQTWEL 1789
            I+QN TWEL
Sbjct: 840  ILQNHTWEL 848



 Score = 95.1 bits (235), Expect(2) = e-142
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +1

Query: 265 EVNMT-FQANDWWIDTGANIHVCSDQSLFSTYQ-VSSGGTVTMGNNDVAPVLGIGQINLK 438
           EVN+      +WWIDTGA  HVCSD+ +FST++ + +G  V MGN+  + + G G++ LK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILK 384

Query: 439 LTSEKTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           +TS K LTL +V +VP+IR+NL+SGSLL   G++L
Sbjct: 385 MTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRL 419


>gb|KZV31144.1| hypothetical protein F511_24590 [Dorcoceras hygrometricum]
          Length = 946

 Score =  415 bits (1066), Expect(2) = e-142
 Identities = 214/446 (47%), Positives = 295/446 (66%), Gaps = 24/446 (5%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVKH-------SSISAPIALNIEPSVTWHQRLRHA 682
            SNK             ++ + LFK+NV         + I A   + +E    WH RL H 
Sbjct: 362  SNKFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYI-VECYNLWHGRLGHV 420

Query: 683  NYNSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTIDRDSEILELIHSDVCDSGR 862
            NYN++KRL++LNL+P  ++    KCE+CVEAK+ K PF ++ R +  LELIHSD+CD   
Sbjct: 421  NYNTLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVQRSTTPLELIHSDICDLKF 480

Query: 863  T-SRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGG 1039
              +RGG KYFVTFIDDC++YC++YL++ KDE +  F+ YKAEVENQ+++  K +RSDRGG
Sbjct: 481  VQTRGGKKYFVTFIDDCTRYCYVYLLRGKDEALEAFQNYKAEVENQLDQR-KNIRSDRGG 539

Query: 1040 EYTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEA 1219
            EY +     +C  +GIIH+ TAPY+PQSNGVAERKNRTL +M+N++LINSG+P+NLWGEA
Sbjct: 540  EYGA-PFDDYCVKSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLINSGLPQNLWGEA 598

Query: 1220 LMTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDG 1399
            +++A +ILN+IP K  DKTPY +WK    + +YLKVWGCLAKV++P+ K+ KIG KT DG
Sbjct: 599  ILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQVKIGPKTFDG 658

Query: 1400 IFIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIGXXXXXXXXXXX 1579
            IFIGYA +S+A RFL+  S+I  I  +T +E+R+A +FEN+FP K               
Sbjct: 659  IFIGYANNSSAYRFLVHKSDIPSIHEDTTIESRNAIFFENVFPRKEGNNKERNEIQRNEG 718

Query: 1580 XXXQE---------------EETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMK 1711
                E               ++   E RRSKRAR+EK    DF + ++E+ P + K+A+ 
Sbjct: 719  SNENEKSEPSCNKRSIEDVDDQDHDEPRRSKRARIEKSFGPDFISYVLENEPRTLKEALS 778

Query: 1712 SVDSPFWKEAINNEIQSIVQNQTWEL 1789
            S D+P WKEA+N+EI+SI+ N TWEL
Sbjct: 779  SPDAPLWKEAVNSEIESIMHNHTWEL 804



 Score =  121 bits (303), Expect(2) = e-142
 Identities = 65/151 (43%), Positives = 89/151 (58%)
 Frame = +1

Query: 91  TIYVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEV 270
           T Y CG+ NH+AKDC   K A                ++ TS V   E    +V F  E 
Sbjct: 215 TCYNCGKPNHMAKDCRRPKKAKKEQQGKDVAN-----HLTTSNVVDMEMDLVAVTF--EA 267

Query: 271 NMTFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSE 450
           NM      WW+DTGA  H+CS++++FSTY   +G  + MGN+  + V GIG++ LK+TS 
Sbjct: 268 NMVDNPRQWWVDTGATRHICSEKAMFSTYVPVTGRKLFMGNSVSSDVAGIGKVVLKMTSR 327

Query: 451 KTLTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           K L L DV HVP+IR+NL+SGS LV+ G++L
Sbjct: 328 KELALIDVLHVPEIRKNLVSGSALVKAGFRL 358


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  402 bits (1032), Expect(2) = e-141
 Identities = 204/442 (46%), Positives = 291/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 531  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 588

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 589  GCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 648

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 649  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGE 708

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 709  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 768

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K+ K+G KTVD +
Sbjct: 769  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKWKLGPKTVDCV 828

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 829  FLGYAIHSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYTPSTSSKETVMPHEH 888

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S+D+
Sbjct: 889  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSLDA 948

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 949  DYWKEAVRSEMDSIMSNGTWEV 970



 Score =  131 bits (330), Expect(2) = e-141
 Identities = 67/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NMV S  G   + +  +L  P V  
Sbjct: 395 FVCGKSGHWAKDCPERKDRK-------------SANMVISE-GGGTSGYGKIL--PTVLS 438

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 439 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 498

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 499 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 527


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  402 bits (1033), Expect(2) = e-141
 Identities = 202/442 (45%), Positives = 288/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++      I+ S  WH RL H N+
Sbjct: 496  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH--ISEIDESNVWHSRLCHVNF 553

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 554  GCLTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 613

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 614  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGE 673

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 674  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 733

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 734  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCV 793

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 794  FLGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEH 853

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 854  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDA 913

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 914  DYWKEAVRSEMDSIMSNGTWEV 935



 Score =  131 bits (329), Expect(2) = e-141
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 360 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 403

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 404 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNESLAAVHGVGTVDLKFTSGKT 463

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 492


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  402 bits (1032), Expect(2) = e-141
 Identities = 204/442 (46%), Positives = 291/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 496  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 553

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 554  GCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 613

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 614  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGE 673

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 674  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 733

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 734  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCV 793

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 794  FLGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPNTSSKETVMPHEH 853

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 854  FALIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDA 913

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 914  DYWKEAVRSEMDSIMSNGTWEV 935



 Score =  131 bits (329), Expect(2) = e-141
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 360 FVCGKSGHWAKDCPERKDKK-------------SANMIISE-GGGTSGYGKIL--PTVLS 403

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 404 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 492


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  402 bits (1032), Expect(2) = e-141
 Identities = 204/442 (46%), Positives = 290/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 351  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 408

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 409  GCMTRLANMSLIPKFTLVKDSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 468

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 469  LTKGGKKYFTTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGE 528

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 529  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 588

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 589  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCV 648

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 649  FLGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEH 708

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 709  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDA 768

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 769  DYWKEAVRSEMDSIMSNGTWEV 790



 Score =  131 bits (329), Expect(2) = e-141
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 215 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 258

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 259 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 318

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 319 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 347


>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1452

 Score =  400 bits (1029), Expect(2) = e-140
 Identities = 204/442 (46%), Positives = 290/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 539  SNKCVVSKYETFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 596

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 597  GCMMRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 656

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 657  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGE 716

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 717  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 776

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 777  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCV 836

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI E+RDA +FEN FP K                
Sbjct: 837  FLGYAIHSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEFPMKYTPSTSSKETVMPHEH 896

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 897  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYLSPDA 956

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 957  DYWKEAVRSEMDSIMSNGTWEV 978



 Score =  130 bits (328), Expect(2) = e-140
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 403 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 446

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 447 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAVVHGVGTVDLKFTSGKT 506

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 507 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 535


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  400 bits (1027), Expect(2) = e-140
 Identities = 202/441 (45%), Positives = 288/441 (65%), Gaps = 19/441 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK----HSSISAPIALNIEPSVTWHQRLRHANYN 691
            SNK             + + GLF+ ++     + ++   I+ N E +V WH RL H N+ 
Sbjct: 496  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNVVNHISENDESNV-WHSRLCHVNFG 554

Query: 692  SIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGRT 865
             + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G  
Sbjct: 555  CMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVL 614

Query: 866  SRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEY 1045
            ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGEY
Sbjct: 615  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 674

Query: 1046 TSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALM 1225
             SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGE ++
Sbjct: 675  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVL 734

Query: 1226 TACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIF 1405
            TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +F
Sbjct: 735  TACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVF 794

Query: 1406 IGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIGX 1549
            +GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                 
Sbjct: 795  LGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHF 854

Query: 1550 XXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSP 1726
                          EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+ 
Sbjct: 855  TPIEHNDQTPEENPEEDNIVDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYSSPDAD 914

Query: 1727 FWKEAINNEIQSIVQNQTWEL 1789
            +WKEA+ +E+ SI+ N TWE+
Sbjct: 915  YWKEAVRSEMDSIMSNGTWEI 935



 Score =  131 bits (330), Expect(2) = e-140
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 360 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PRVLS 403

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 404 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 492


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  400 bits (1027), Expect(2) = e-140
 Identities = 202/441 (45%), Positives = 288/441 (65%), Gaps = 19/441 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK----HSSISAPIALNIEPSVTWHQRLRHANYN 691
            SNK             + + GLF+ ++     + ++   I+ N E +V WH RL H N+ 
Sbjct: 477  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNVVNHISENDESNV-WHSRLCHVNFG 535

Query: 692  SIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGRT 865
             + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G  
Sbjct: 536  CMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGVL 595

Query: 866  SRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGEY 1045
            ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGEY
Sbjct: 596  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 655

Query: 1046 TSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEALM 1225
             SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGE ++
Sbjct: 656  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVL 715

Query: 1226 TACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGIF 1405
            TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +F
Sbjct: 716  TACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVF 775

Query: 1406 IGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIGX 1549
            +GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                 
Sbjct: 776  LGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHF 835

Query: 1550 XXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDSP 1726
                          EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+ 
Sbjct: 836  TPIEHNDQTPEENPEEDNIVDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYSSPDAD 895

Query: 1727 FWKEAINNEIQSIVQNQTWEL 1789
            +WKEA+ +E+ SI+ N TWE+
Sbjct: 896  YWKEAVRSEMDSIMSNGTWEI 916



 Score =  131 bits (330), Expect(2) = e-140
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 341 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PRVLS 384

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 385 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 444

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 445 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 473


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1298

 Score =  400 bits (1028), Expect(2) = e-140
 Identities = 203/442 (45%), Positives = 290/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 496  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 553

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 554  GCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 613

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 614  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGE 673

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 674  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 733

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 734  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCV 793

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYK------------TRIG 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 794  FLGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEH 853

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++   S D+
Sbjct: 854  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEVYSSPDA 913

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 914  DYWKEAVRSEMDSIMSNGTWEV 935



 Score =  131 bits (329), Expect(2) = e-140
 Identities = 66/149 (44%), Positives = 94/149 (63%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 360 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 403

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 404 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 463

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 464 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 492


>gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF96500.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1240

 Score =  402 bits (1032), Expect(2) = e-140
 Identities = 204/442 (46%), Positives = 290/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 351  SNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 408

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 409  GCMMRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 468

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 469  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGE 528

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 529  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 588

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 589  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCV 648

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIG------------ 1546
            F+GYA  S   RFLI+NS + D+   TI E+RDA +FEN FP K                
Sbjct: 649  FLGYAIHSVVYRFLIVNSGVPDMHAGTIFESRDATFFENEFPMKYTSSTSSKETVMPHEH 708

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 709  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDA 768

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 769  DYWKEAVRSEMDSIMSNGTWEV 790



 Score =  129 bits (323), Expect(2) = e-140
 Identities = 65/149 (43%), Positives = 93/149 (62%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 215 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 258

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D S FS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 259 VFHSPDWWVDTGANIHVCADISQFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 318

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++G++L
Sbjct: 319 VQLKNVQHVPSIKKNLVSGSLLCREGFRL 347


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  402 bits (1032), Expect(2) = e-140
 Identities = 204/442 (46%), Positives = 291/442 (65%), Gaps = 20/442 (4%)
 Frame = +2

Query: 524  SNKVTSXXXXXXXXXXFMNNGLFKLNVK-----HSSISAPIALNIEPSVTWHQRLRHANY 688
            SNK             + + GLF+ ++      H++++  I+ N E +V WH RL H N+
Sbjct: 351  SNKCVVSKYETFVGKGYDSGGLFRFSLNDMCNNHNAVNH-ISENDESNV-WHSRLCHVNF 408

Query: 689  NSIKRLIQLNLIPKFNVKDHDKCEICVEAKLPKKPFKTID-RDSEILELIHSDVCD-SGR 862
              + RL  ++LIPKF +    KC  CV++K P+KP K  + R+   LEL+HSD+C+ +G 
Sbjct: 409  GCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 468

Query: 863  TSRGGNKYFVTFIDDCSKYCHLYLIKTKDEVINKFKVYKAEVENQVEKTIKILRSDRGGE 1042
             ++GG KYF+T IDDC+++C++YL+KTKDE ++ FK+YKAEVENQ+E+ IK LRSDRGGE
Sbjct: 469  LTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGE 528

Query: 1043 YTSNELKQFCEDNGIIHEMTAPYTPQSNGVAERKNRTLMDMVNSMLINSGVPENLWGEAL 1222
            Y SNE   FCE+ GIIHEMT PY+PQSNGVAERKNRTL +MVN+ML  +G+ +  WGEA+
Sbjct: 529  YFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAV 588

Query: 1223 MTACYILNRIPFKNSDKTPYTIWKNRNLNLEYLKVWGCLAKVKIPENKRKKIGRKTVDGI 1402
            +TAC++LN+IP K+ + TP+  W+ + LNL YL+ WGCLAKV +P  K++K+G KTVD +
Sbjct: 589  LTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCV 648

Query: 1403 FIGYAFDSNANRFLIINSEINDIANNTIVEARDAYYFENIFPYKTRIG------------ 1546
            F+GYA  S   RFLI+NS + D+   TI+E+RDA +FEN FP K                
Sbjct: 649  FLGYAIHSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEY 708

Query: 1547 XXXXXXXXXXXXXXQEEETQIEVRRSKRARVEK-VHEDFYALLVEDSPTSFKDAMKSVDS 1723
                           EE+  ++ R+SKR RV K   +D+   LV+D+P + ++A  S D+
Sbjct: 709  FAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDA 768

Query: 1724 PFWKEAINNEIQSIVQNQTWEL 1789
             +WKEA+ +E+ SI+ N TWE+
Sbjct: 769  DYWKEAVRSEMDSIMSNGTWEV 790



 Score =  128 bits (322), Expect(2) = e-140
 Identities = 65/149 (43%), Positives = 93/149 (62%)
 Frame = +1

Query: 97  YVCGRTNHLAKDCYYKKSAXXXXXXXXXXXXXXQVNMVTSGVGSSETAFRSVLFTPEVNM 276
           +VCG++ H AKDC  +K                  NM+ S  G   + +  +L  P V  
Sbjct: 215 FVCGKSGHWAKDCPERKDRK-------------SANMIISE-GGGTSGYGKIL--PTVLS 258

Query: 277 TFQANDWWIDTGANIHVCSDQSLFSTYQVSSGGTVTMGNNDVAPVLGIGQINLKLTSEKT 456
            F + DWW+DTGANIHVC+D SLFS+YQV  G ++ MGN  +A V G+G ++LK TS KT
Sbjct: 259 VFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKT 318

Query: 457 LTLQDVHHVPDIRRNLISGSLLVQQGYKL 543
           + L++V HVP I++NL+SGSLL ++ ++L
Sbjct: 319 VQLKNVQHVPSIKKNLVSGSLLCREDFRL 347