BLASTX nr result

ID: Ophiopogon26_contig00016798 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00016798
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK61124.1| uncharacterized protein A4U43_C08F26490 [Asparagu...    53   6e-06
ref|XP_021647406.1| probable LRR receptor-like serine/threonine-...    54   8e-06
gb|PON32267.1| Tyrosine-protein kinase, partial [Trema orientalis]     52   9e-06

>gb|ONK61124.1| uncharacterized protein A4U43_C08F26490 [Asparagus officinalis]
          Length = 165

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 35/63 (55%)
 Frame = -2

Query: 373 DEDADQNNDKTIRKSIKGGQVHECLASVFRIGLSCTRELASERMHMGDVTKEMMKTKAAF 194
           D D D + D     S+    V EC AS+ R+G+ C+ E   ERM MGD  KE+ K +  F
Sbjct: 78  DNDGDHHYDDDDDWSLNDTSVIECAASMLRLGILCSNEYPEERMEMGDAIKELHKIRDTF 137

Query: 193 LRD 185
           LR+
Sbjct: 138 LRN 140


>ref|XP_021647406.1| probable LRR receptor-like serine/threonine-protein kinase At3g47570
            [Hevea brasiliensis]
          Length = 1026

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
 Frame = -2

Query: 322  GGQVHECLASVFRIGLSCTRELASERMHMGDVTKEMMKTKAAFLRDEAIGGR----IYEG 155
            GG   +C+ SV RIG++C+ E   ERM MGDV  E++K K ++L++    GR     + G
Sbjct: 961  GGSFKDCILSVMRIGVACSMEQPRERMKMGDVISELVKIKGSYLQERLKQGRRNAYQFGG 1020

Query: 154  PSDAKV 137
            PS +++
Sbjct: 1021 PSTSRI 1026


>gb|PON32267.1| Tyrosine-protein kinase, partial [Trema orientalis]
          Length = 132

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -2

Query: 391 DAGMFSDEDADQ--NNDKTIRKSIKGGQVHECLASVFRIGLSCTRELASERMHMGDVTKE 218
           D G+ ++ + ++   +  T+ ++ +G   H+C+ S+FRIG+ C+ E  SERM + D  KE
Sbjct: 57  DHGLITEGEQEKATTSSNTVHQTRRGKMQHQCIVSIFRIGVMCSEESPSERMKIKDALKE 116

Query: 217 MMKTKAAFLRD 185
           ++  K   L D
Sbjct: 117 LLAIKNMLLND 127


Top