BLASTX nr result

ID: Ophiopogon26_contig00015408 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00015408
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagu...    74   2e-12
ref|XP_020257494.1| zinc finger CCCH domain-containing protein 6...    74   3e-12
ref|XP_020257493.1| zinc finger CCCH domain-containing protein 6...    74   3e-12

>gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagus officinalis]
          Length = 345

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -1

Query: 476 SYNRGYSSSVAVASHGHMQHGYNTGYPPSVHNQIPSTASYDSHAY-GNPAVQLQPRR--- 309
           S+N G SSS A   + HM HGYNTG+ P   +Q+ +  SY +H Y GNP  QL PRR   
Sbjct: 270 SHNFGISSSAARIPNVHMLHGYNTGFVPYARDQMSTRVSYVTHPYDGNPQFQLDPRRRVA 329

Query: 308 LDDGASGGQFHGWRR 264
            DD A+G QFH WRR
Sbjct: 330 FDDRAAGHQFHEWRR 344


>ref|XP_020257494.1| zinc finger CCCH domain-containing protein 62-like isoform X2
           [Asparagus officinalis]
          Length = 444

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -1

Query: 476 SYNRGYSSSVAVASHGHMQHGYNTGYPPSVHNQIPSTASYDSHAY-GNPAVQLQPRR--- 309
           S+N G SSS A   + HM HGYNTG+ P   +Q+ +  SY +H Y GNP  QL PRR   
Sbjct: 369 SHNFGISSSAARIPNVHMLHGYNTGFVPYARDQMSTRVSYVTHPYDGNPQFQLDPRRRVA 428

Query: 308 LDDGASGGQFHGWRR 264
            DD A+G QFH WRR
Sbjct: 429 FDDRAAGHQFHEWRR 443


>ref|XP_020257493.1| zinc finger CCCH domain-containing protein 62-like isoform X1
           [Asparagus officinalis]
          Length = 477

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -1

Query: 476 SYNRGYSSSVAVASHGHMQHGYNTGYPPSVHNQIPSTASYDSHAY-GNPAVQLQPRR--- 309
           S+N G SSS A   + HM HGYNTG+ P   +Q+ +  SY +H Y GNP  QL PRR   
Sbjct: 402 SHNFGISSSAARIPNVHMLHGYNTGFVPYARDQMSTRVSYVTHPYDGNPQFQLDPRRRVA 461

Query: 308 LDDGASGGQFHGWRR 264
            DD A+G QFH WRR
Sbjct: 462 FDDRAAGHQFHEWRR 476


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