BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00015360
         (3570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255590.1| DNA-directed RNA polymerases IV and V subuni...  2018   0.0  
ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a...  1839   0.0  
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a...  1831   0.0  
ref|XP_020112440.1| DNA-directed RNA polymerases IV and V subuni...  1827   0.0  
gb|OAY64687.1| DNA-directed RNA polymerases IV and V subunit 2, ...  1816   0.0  
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a...  1807   0.0  
ref|XP_012703111.1| DNA-directed RNA polymerases IV and V subuni...  1720   0.0  
ref|XP_020692708.1| DNA-directed RNA polymerases IV and V subuni...  1714   0.0  
gb|PAN40366.1| hypothetical protein PAHAL_G02501 [Panicum hallii...  1708   0.0  
ref|XP_020593256.1| DNA-directed RNA polymerases IV and V subuni...  1705   0.0  
ref|XP_020593257.1| DNA-directed RNA polymerases IV and V subuni...  1705   0.0  
ref|XP_002468227.1| DNA-directed RNA polymerases IV and V subuni...  1699   0.0  
ref|XP_015636222.1| PREDICTED: DNA-directed RNA polymerases IV a...  1698   0.0  
gb|AQK46524.1| DNA-directed RNA polymerases IV and V subunit 2 [...  1697   0.0  
dbj|BAF15955.1| Os04g0641000, partial [Oryza sativa Japonica Group]  1697   0.0  
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]        1697   0.0  
ref|NP_001338873.1| required to maintain repression 7 [Zea mays]...  1696   0.0  
ref|XP_002447199.1| DNA-directed RNA polymerases IV and V subuni...  1696   0.0  
ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV a...  1693   0.0  
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...  1692   0.0  

>ref|XP_020255590.1| DNA-directed RNA polymerases IV and V subunit 2-like [Asparagus
            officinalis]
          Length = 1192

 Score = 2018 bits (5228), Expect = 0.0
 Identities = 981/1155 (84%), Positives = 1068/1155 (92%), Gaps = 2/1155 (0%)
 Frame = -2

Query: 3551 QKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYD 3372
            Q  +L  ETLE+FCK A++AFF+EFGLI HQINSFNQF+TSGLQE+FDSLGEV VEPGYD
Sbjct: 38   QYLDLKEETLERFCKDAARAFFSEFGLINHQINSFNQFITSGLQEIFDSLGEVVVEPGYD 97

Query: 3371 PSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEV 3192
            PSKGGGGDW+HA+I YG+VRL KP+FWTERS QE E LKLLPKHARLQNMTYSSKLKVEV
Sbjct: 98   PSKGGGGDWQHATITYGKVRLGKPTFWTERSGQETEELKLLPKHARLQNMTYSSKLKVEV 157

Query: 3191 KVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYD 3012
            +VQV+I EKSDKAKTGKD +I KRVL+++KKEI IGS+PVMVKSK CWLDTL+KSDCLYD
Sbjct: 158  RVQVYILEKSDKAKTGKDSHICKRVLSDDKKEITIGSMPVMVKSKLCWLDTLDKSDCLYD 217

Query: 3011 SGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLN 2832
            SGGYFIVKGAEK FIAQEQRCLTRLW+TD+P WTAS  SE+KK+RVYVKL+DASK+DGLN
Sbjct: 218  SGGYFIVKGAEKVFIAQEQRCLTRLWITDKPVWTASHISEMKKKRVYVKLVDASKVDGLN 277

Query: 2831 SGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE 2652
            SGKLIS+YFLYATMPVW+MFFALGA SDKEVF+MIDLDGCD  +TNIILATIRDADEQ  
Sbjct: 278  SGKLISIYFLYATMPVWVMFFALGAASDKEVFEMIDLDGCDNNITNIILATIRDADEQCN 337

Query: 2651 GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGY 2472
             FR AG+SRDYV++LIK++KFPP+ESFDEY+ KYLFPTISGHREKA FLGYIVKCLLLG 
Sbjct: 338  DFRKAGRSRDYVDSLIKNSKFPPTESFDEYVGKYLFPTISGHREKALFLGYIVKCLLLGC 397

Query: 2471 SGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYW 2292
             GKRKCD ++DFRNKRLDLVGELL  EL A+IRHAEKRMVKAMQRDL GDRDLQLIERYW
Sbjct: 398  FGKRKCDKRDDFRNKRLDLVGELLGRELWANIRHAEKRMVKAMQRDLSGDRDLQLIERYW 457

Query: 2291 DASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKA 2112
            DASI+TNGLNRAFSTG WCHP+ KTERCSGVVANLQRTNALQMM+ LR+TR QVAYAGKA
Sbjct: 458  DASIVTNGLNRAFSTGQWCHPYIKTERCSGVVANLQRTNALQMMSSLRKTRQQVAYAGKA 517

Query: 2111 GDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQI 1932
            GDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSS  NEP+LDKLVSCGMEKLDQI
Sbjct: 518  GDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSSINEPVLDKLVSCGMEKLDQI 577

Query: 1931 SVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTD 1752
            SV+SLSK  K+FLNGDWIGVCSDS+ FV++FR MRR+Q+I+SQVEIKLD++Q+EVR+F+D
Sbjct: 578  SVSSLSKTYKIFLNGDWIGVCSDSRLFVLNFRQMRRAQEINSQVEIKLDQHQKEVRIFSD 637

Query: 1751 AGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQE 1572
            AGRLLRP                +SS+QSLVNEG+IE IGVEEEEDC  AWGIRYLLQ+ 
Sbjct: 638  AGRLLRPLLIVENLKKVKSLKGGISSYQSLVNEGIIELIGVEEEEDCRAAWGIRYLLQEG 697

Query: 1571 NGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
            + Q A  YTHC+ DPSF++GLSCGIIPFANHN ARRVLFQAQKHSHQA+GFSTTNP IRV
Sbjct: 698  SKQAAIPYTHCELDPSFLLGLSCGIIPFANHNLARRVLFQAQKHSHQAVGFSTTNPDIRV 757

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQE 1218
            DTLMHQMYYPQRPLF+TV+ADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVH GYNQE
Sbjct: 758  DTLMHQMYYPQRPLFRTVVADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHLGYNQE 817

Query: 1217 DSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDD 1038
            DSLVMNRASLERGMFRTEHFRSYKAEV+NKE++KRIK+KDKVEF KMQSKKGRVDSLEDD
Sbjct: 818  DSLVMNRASLERGMFRTEHFRSYKAEVENKEITKRIKLKDKVEFGKMQSKKGRVDSLEDD 877

Query: 1037 GFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV 858
            GFP+IGACLQ+GDIVIGKVAESG+DHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV
Sbjct: 878  GFPWIGACLQTGDIVIGKVAESGEDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV 937

Query: 857  RSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAAL 678
            RSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA+L
Sbjct: 938  RSPCLGDKFSSMHGQKGVVGFLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLEASL 997

Query: 677  GKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTF 498
            GKGIA GGKITYATPFTTPSVDVI EQLH L FQRWG+ERVLNGRTGE+M++MIF GPTF
Sbjct: 998  GKGIALGGKITYATPFTTPSVDVIAEQLHRLNFQRWGAERVLNGRTGELMQTMIFTGPTF 1057

Query: 497  YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 318
            YQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL
Sbjct: 1058 YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 1117

Query: 317  FTLSDFSQMHICRTCSRPANVIQRALSNGNVRGPYCGFCKSAENIVRVNVPYGAKLLFQE 138
            FTLSDFSQMH+CRTCSR ANVIQR +SNG +RGPYCGFCKS EN+VR+NVPYGAKLLFQE
Sbjct: 1118 FTLSDFSQMHVCRTCSRFANVIQRVVSNGKIRGPYCGFCKSGENVVRINVPYGAKLLFQE 1177

Query: 137  LFSMGICLKFETEVC 93
            LFSMGICLKFETEVC
Sbjct: 1178 LFSMGICLKFETEVC 1192


>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Phoenix dactylifera]
          Length = 1189

 Score = 1839 bits (4763), Expect = 0.0
 Identities = 884/1164 (75%), Positives = 1018/1164 (87%), Gaps = 14/1164 (1%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            N+NV +LEKFCK A+++FF E+GLI HQINS+N+F+  G+Q+LFDSLGEV+VEPGYDPSK
Sbjct: 26   NMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEFIGHGIQDLFDSLGEVNVEPGYDPSK 85

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
              G +WRHA++ +G+VRL+KPSFW+ R D  +E LKLLP+HARLQNMTYSS+LKVEV+VQ
Sbjct: 86   KRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENLKLLPRHARLQNMTYSSQLKVEVRVQ 145

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+ QEKSDKAKTGKD YI K V++++KKEI IG IPVM++SK CWL TL+KSDCL+DSGG
Sbjct: 146  VYTQEKSDKAKTGKDAYIHKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGG 205

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQR L R+W+TD+P+WT S  SE+K++R+Y+KL++A K +G + GK
Sbjct: 206  YFLIKGMEKTFIAQEQRHLARVWVTDKPSWTVSYLSEMKRKRIYIKLVEAPKAEGFSGGK 265

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE--- 2652
            +++ +FLYAT+PVWIMFFALGA+SDKEVF+MIDL      L NIILAT+++ADE Y+   
Sbjct: 266  VVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYKKFR 325

Query: 2651 --------GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYI 2496
                     FR   K++DYVN+ +K +KFPPSESFDEY+ K+LFP ISGHR+KA FLGY+
Sbjct: 326  EDADEHDKNFRRVDKAQDYVNSQVKVSKFPPSESFDEYVDKFLFPNISGHRQKALFLGYM 385

Query: 2495 VKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRD 2316
            VKCLLL   GKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAE+RMVKAMQRDL+GDRD
Sbjct: 386  VKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRD 445

Query: 2315 LQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRL 2136
            LQLIERY DASIITNGLNRAFSTG WCHP+++TERCSG+VA L+RTN LQMM+DLR+TR 
Sbjct: 446  LQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQ 505

Query: 2135 QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSC 1956
            QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTALVS +  EPILDKL+SC
Sbjct: 506  QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKLISC 565

Query: 1955 GMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQ 1776
            GMEKLD+IS++S+S MDKVF+NGDW+GVC+DS SFV   R MRR++ I  QVEIK D++Q
Sbjct: 566  GMEKLDEISLSSISNMDKVFMNGDWVGVCADSTSFVAKLRCMRRARLIHPQVEIKRDKHQ 625

Query: 1775 REVRVFTDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWG 1596
            REVR+F+DAGR+LRP                V SFQ L++EG+IE IGVEEEEDC TAWG
Sbjct: 626  REVRIFSDAGRILRPLLIVENLKKTSKLKGGVCSFQYLMDEGIIELIGVEEEEDCHTAWG 685

Query: 1595 IRYLLQQENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFS 1422
            IR+L   + G PA  Y+HC+ D SF++GLSCGIIPFANHN+ARRVL+QA+KHS QAIGFS
Sbjct: 686  IRHLFMGDEGGPAPKYSHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQAIGFS 745

Query: 1421 TTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVN 1242
            TTNP IRVDTL HQ+YYPQ+PLF+TVIADCLGR DYSL  KD M RPE FNGQNAIVAVN
Sbjct: 746  TTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRADYSLRRKDSMPRPEYFNGQNAIVAVN 805

Query: 1241 VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKG 1062
            VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV+NKE++KR K++DKV+F KMQSKKG
Sbjct: 806  VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKELTKRFKLRDKVDFGKMQSKKG 865

Query: 1061 RVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNF 882
            RVDSL+DDGFP+IGA LQSGDIVIGKVAESG+DH  KLKHTEKGMVQKVVLSANDEGKNF
Sbjct: 866  RVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNF 925

Query: 881  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTP 702
            AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTP
Sbjct: 926  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTP 985

Query: 701  GQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRS 522
            GQLLEAALGKGIACGG + YATPFTT SVDVITEQLH   F RWGSE+VLNGRTGE+MRS
Sbjct: 986  GQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRS 1045

Query: 521  MIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 342
            MIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA
Sbjct: 1046 MIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 1105

Query: 341  AANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNGN-VRGPYCGFCKSAENIVRVNVP 165
            A+NLHERLFTLSDFSQMHIC+TC R ANVI R +  GN +RGPYC +C+S+ENIV++NVP
Sbjct: 1106 ASNLHERLFTLSDFSQMHICQTCKRAANVILRPVVGGNKIRGPYCNYCQSSENIVKINVP 1165

Query: 164  YGAKLLFQELFSMGICLKFETEVC 93
            YGAKLL+QELFSMGICLKF+TEVC
Sbjct: 1166 YGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Elaeis
            guineensis]
          Length = 1189

 Score = 1831 bits (4743), Expect = 0.0
 Identities = 882/1164 (75%), Positives = 1014/1164 (87%), Gaps = 14/1164 (1%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            ++NV +LEKFCK A+++FF E+GLI HQINS+N+F+  G+Q+LFDSLGEV+VEPGYDPSK
Sbjct: 26   DMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEFIEHGIQDLFDSLGEVNVEPGYDPSK 85

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
              G +WRHA++ +G+VRL+KPSFW+ R D  +E LKLLP+HARLQNMTYSS++KVEV+V 
Sbjct: 86   KRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENLKLLPRHARLQNMTYSSQMKVEVRVL 145

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+ QEKSDKAKTGKD YI K V++++KKEI IG IPVM++SK CWL TL+KSDCL+DSGG
Sbjct: 146  VYTQEKSDKAKTGKDAYIVKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGG 205

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQR L R+W+TD+P+W  S  SEIK++R+Y+KL++A K +G + GK
Sbjct: 206  YFLIKGMEKTFIAQEQRHLARVWVTDKPSWAVSYLSEIKRKRIYIKLVEAPKAEGFSGGK 265

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYE--- 2652
            +++ +FLYAT+PVWIMFFALGA+SDKEVF+MIDL      L NIILAT+++ADE Y+   
Sbjct: 266  VVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYKKFR 325

Query: 2651 --------GFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYI 2496
                     FR   K++DYVN  +K +KFPPSESFDEY+ K+LFP I GHR+KA FLGY+
Sbjct: 326  EDADEHDKNFRRIDKAQDYVNGQVKVSKFPPSESFDEYVDKFLFPNIYGHRQKALFLGYM 385

Query: 2495 VKCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRD 2316
            VKCLLL   GKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAE+RMVKAMQRDL+GDRD
Sbjct: 386  VKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRD 445

Query: 2315 LQLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRL 2136
            LQLIERY DASIITNGLNRAFSTG WCHP+++TERCSG+VA L+RTN LQMM+DLR+TR 
Sbjct: 446  LQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQ 505

Query: 2135 QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSC 1956
            QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTALVS +  EPILDKL+SC
Sbjct: 506  QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKLISC 565

Query: 1955 GMEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQ 1776
            GMEKLD+IS+TS+S MDKVFLNGDW+GVC+DS SFV   R MRR+  I SQVEIK D++Q
Sbjct: 566  GMEKLDEISLTSVSSMDKVFLNGDWVGVCADSSSFVARLRCMRRATLIHSQVEIKRDKHQ 625

Query: 1775 REVRVFTDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWG 1596
            REVR+F+DAGR+LRP                V SFQ L+++G+IE IGVEEEEDC TAWG
Sbjct: 626  REVRIFSDAGRILRPLLIVENLEKISKLKGGVCSFQHLMDQGIIELIGVEEEEDCPTAWG 685

Query: 1595 IRYLLQQENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFS 1422
            IR+L   + GQPA  YTHC+ D SF++GLSCGIIPFANHN+ARRVL+QA+KHS QAIGFS
Sbjct: 686  IRHLFMGDEGQPAPKYTHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQAIGFS 745

Query: 1421 TTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVN 1242
            TTNP IRVDTL HQ+YYPQ+PLF+TVIADCLGR  +SLG KD M RPE FNGQNAIVAVN
Sbjct: 746  TTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAVHSLGRKDSMPRPEYFNGQNAIVAVN 805

Query: 1241 VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKG 1062
            VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV+NKE++KR K++DKV+F KMQSKKG
Sbjct: 806  VHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKELTKRFKLRDKVDFGKMQSKKG 865

Query: 1061 RVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNF 882
            +VDSL+DDGFP+IGA LQSGDIVIGKVAESG+DH  KLKHTEKGMVQKVVLSANDEGKNF
Sbjct: 866  KVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNF 925

Query: 881  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTP 702
            AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTP
Sbjct: 926  AVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTP 985

Query: 701  GQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRS 522
            GQLLEAALGKGIACGG + YATPFTT SVDVITEQLH   F RWGSE+VLNGRTGE+MRS
Sbjct: 986  GQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRS 1045

Query: 521  MIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 342
            MIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA
Sbjct: 1046 MIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 1105

Query: 341  AANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNGN-VRGPYCGFCKSAENIVRVNVP 165
            A+NLHERLF LSDFSQMHIC+TC R ANVI R +  GN +RGPYC FC+S+ENIV++NVP
Sbjct: 1106 ASNLHERLFMLSDFSQMHICQTCRRAANVILRPVVGGNKIRGPYCNFCQSSENIVKINVP 1165

Query: 164  YGAKLLFQELFSMGICLKFETEVC 93
            YGAKLL+QELFSMGICLKF+TEVC
Sbjct: 1166 YGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_020112440.1| DNA-directed RNA polymerases IV and V subunit 2-like [Ananas comosus]
 ref|XP_020112441.1| DNA-directed RNA polymerases IV and V subunit 2-like [Ananas comosus]
          Length = 1201

 Score = 1827 bits (4732), Expect = 0.0
 Identities = 875/1163 (75%), Positives = 1012/1163 (87%), Gaps = 8/1163 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S +  +++V +LEKFCK A++AFFN++GLI HQINS+N+F+  GLQ+LFDSLGE++VEPG
Sbjct: 39   SMENLDMSVASLEKFCKEAARAFFNDWGLISHQINSYNEFIAHGLQDLFDSLGEITVEPG 98

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK GG  WRHA+I +G+V L+KP FW+ ++D E+ECLKL P+HARLQNMTYSS++KV
Sbjct: 99   YDPSKKGGSAWRHATISFGKVSLEKPVFWSGKNDYEEECLKLTPRHARLQNMTYSSQMKV 158

Query: 3197 EVKVQVFIQEKSDKAKTGKDPY-----ISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLE 3033
            EV+VQV+  EKSDKAK+GKD       + KRV  +EKKEI IG +PVMV+S  CWL+TL 
Sbjct: 159  EVRVQVYSHEKSDKAKSGKDQSGKDQSVHKRVWADEKKEITIGRLPVMVRSNLCWLNTLG 218

Query: 3032 KSDCLYDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDA 2853
            KSDCL+DSGGYF++KG EK FIAQEQRCLTRLW+TD+P WT S  SEIK++R+Y+KLL++
Sbjct: 219  KSDCLFDSGGYFLIKGMEKTFIAQEQRCLTRLWVTDRPVWTVSYISEIKRKRIYIKLLES 278

Query: 2852 SKIDGLNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIR 2673
             K +G N  ++IS+YFLYAT P+W+MFFALGA+SDKE+F+MIDL+ C   + NI+LATI+
Sbjct: 279  PKAEGSNGRRVISLYFLYATAPIWLMFFALGASSDKEIFEMIDLEDCSASIVNILLATIK 338

Query: 2672 DADEQYEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIV 2493
            + DEQ+EGFR   K+R+Y+N  IK+AKFPPSESFDEY+SKYLFP +SGHR+KA  LGY+V
Sbjct: 339  ETDEQFEGFRKEDKAREYINEQIKNAKFPPSESFDEYVSKYLFPGVSGHRQKALSLGYMV 398

Query: 2492 KCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDL 2313
            KCLLL +SGKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMVK MQRDL+GDRDL
Sbjct: 399  KCLLLAFSGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVKTMQRDLYGDRDL 458

Query: 2312 QLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQ 2133
            QLIERYWDASIITNG+NRAFSTG WCHP+++TER SG+VA L+RTN LQMM+DLR+TR Q
Sbjct: 459  QLIERYWDASIITNGINRAFSTGAWCHPYKRTERISGIVATLRRTNPLQMMSDLRKTRQQ 518

Query: 2132 VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCG 1953
            VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  EPILDKLVSCG
Sbjct: 519  VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRIMEPILDKLVSCG 578

Query: 1952 MEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQR 1773
            MEKLD+  ++S +KMDKVFLNGDWIGVC+D  SFV SFR MRR++ I +QVEIK D++Q+
Sbjct: 579  MEKLDESPLSSTTKMDKVFLNGDWIGVCADPSSFVESFRCMRRNKVIHAQVEIKRDKHQK 638

Query: 1772 EVRVFTDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGI 1593
            EVR+F+DAGR++RP                  SFQ L+++ +IE IGVEEEED  TAWG+
Sbjct: 639  EVRIFSDAGRIMRPLLVVDNLKKIKNLKGGSYSFQYLMDQEIIELIGVEEEEDLQTAWGV 698

Query: 1592 RYLLQQENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFST 1419
            R+L   + G+P   Y+H + + SF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIGFST
Sbjct: 699  RHLFVGDKGEPIPKYSHSELELSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFST 758

Query: 1418 TNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNV 1239
            TNP IRVDTL HQ+YYPQRPLFKTVIADCLGR DYS G KD ++RPE FNGQNAIVAVNV
Sbjct: 759  TNPNIRVDTLSHQLYYPQRPLFKTVIADCLGRTDYSPGRKDDVARPEYFNGQNAIVAVNV 818

Query: 1238 HQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGR 1059
            HQGYNQEDSLVMNR SLERGMFRTEHFRSYKAEV+NK+ + R+K KDKV+F K QSKKGR
Sbjct: 819  HQGYNQEDSLVMNRTSLERGMFRTEHFRSYKAEVENKDFTNRLKPKDKVDFGKTQSKKGR 878

Query: 1058 VDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFA 879
            VDSL+DDG P+I A LQSGDIVIGKVAESG+DHS KLKHTEKGMVQKV+LSANDEGKNFA
Sbjct: 879  VDSLDDDGLPYISASLQSGDIVIGKVAESGEDHSIKLKHTEKGMVQKVILSANDEGKNFA 938

Query: 878  VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPG 699
            VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPG
Sbjct: 939  VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTRQGIVPDIVINPHAFPTRQTPG 998

Query: 698  QLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSM 519
            QLLEAALGKGIACGG   YATPFTTPSVDVITEQLH   + RWGSE+VLNGRTGE+MRSM
Sbjct: 999  QLLEAALGKGIACGGSARYATPFTTPSVDVITEQLHRAGYSRWGSEKVLNGRTGEMMRSM 1058

Query: 518  IFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAA 339
            IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAA
Sbjct: 1059 IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAA 1118

Query: 338  ANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPY 162
            ANLHERLF LSDFSQMHIC+TC R ANVI R +  G  +RGP+CGFC+SAENIV++NVPY
Sbjct: 1119 ANLHERLFMLSDFSQMHICQTCKRAANVILRPVPGGKKIRGPFCGFCRSAENIVKINVPY 1178

Query: 161  GAKLLFQELFSMGICLKFETEVC 93
            GAKLL+QELFS GICLKFETEVC
Sbjct: 1179 GAKLLYQELFSTGICLKFETEVC 1201


>gb|OAY64687.1| DNA-directed RNA polymerases IV and V subunit 2, partial [Ananas
            comosus]
          Length = 1228

 Score = 1816 bits (4703), Expect = 0.0
 Identities = 875/1182 (74%), Positives = 1012/1182 (85%), Gaps = 27/1182 (2%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S +  +++V +LEKFCK A++AFFN++GLI HQINS+N+F+  GLQ+LFDSLGE++VEPG
Sbjct: 47   SMENLDMSVASLEKFCKEAARAFFNDWGLISHQINSYNEFIAHGLQDLFDSLGEITVEPG 106

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK GG  WRHA+I +G+V L+KP FW+ ++D E+ECLKL P+HARLQNMTYSS++KV
Sbjct: 107  YDPSKKGGSAWRHATISFGKVSLEKPVFWSGKNDYEEECLKLTPRHARLQNMTYSSQMKV 166

Query: 3197 EVKVQVFIQEKSDKAKTGKDPY-----ISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLE 3033
            EV+VQV+  EKSDKAK+GKD       + KRV  +EKKEI IG +PVMV+S  CWL+TL 
Sbjct: 167  EVRVQVYSHEKSDKAKSGKDQSGKDQSVHKRVWADEKKEITIGRLPVMVRSNLCWLNTLG 226

Query: 3032 KSDCLYDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDA 2853
            KSDCL+DSGGYF++KG EK FIAQEQRCLTRLW+TD+P WT S  SEIK++R+Y+KLL++
Sbjct: 227  KSDCLFDSGGYFLIKGMEKTFIAQEQRCLTRLWVTDRPVWTVSYISEIKRKRIYIKLLES 286

Query: 2852 SKIDGLNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIR 2673
             K +G N  ++IS+YFLYAT P+W+MFFALGA+SDKE+F+MIDL+ C   + NI+LATI+
Sbjct: 287  PKAEGSNGRRVISLYFLYATAPIWLMFFALGASSDKEIFEMIDLEDCSASIVNILLATIK 346

Query: 2672 DADEQYEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIV 2493
            + DEQ+EGFR   K+R+Y+N  IK+AKFPPSESFDEY+SKYLFP +SGHR+KA  LGY+V
Sbjct: 347  ETDEQFEGFRKEDKAREYINEQIKNAKFPPSESFDEYVSKYLFPGVSGHRQKALSLGYMV 406

Query: 2492 KCLLLGYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDL 2313
            KCLLL +SGKRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMVK MQRDL+GDRDL
Sbjct: 407  KCLLLAFSGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVKTMQRDLYGDRDL 466

Query: 2312 QLIERYWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQ 2133
            QLIERYWDASIITNG+NRAFSTG WCHP+++TER SG+VA L+RTN LQMM+DLR+TR Q
Sbjct: 467  QLIERYWDASIITNGINRAFSTGAWCHPYKRTERISGIVATLRRTNPLQMMSDLRKTRQQ 526

Query: 2132 VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCG 1953
            VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  EPILDKLVSCG
Sbjct: 527  VAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRIMEPILDKLVSCG 586

Query: 1952 MEKLDQISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQR 1773
            MEKLD+  ++S +KMDKVFLNGDWIGVC+D  SFV SFR MRR++ I +QVEIK D++Q+
Sbjct: 587  MEKLDESPLSSTTKMDKVFLNGDWIGVCADPSSFVESFRCMRRNKVIHAQVEIKRDKHQK 646

Query: 1772 EVRVFTDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGI 1593
            EVR+F+DAGR++RP                  SFQ L+++ +IE IGVEEEED  TAWG+
Sbjct: 647  EVRIFSDAGRIMRPLLVVDNLKKIKNLKGGSYSFQYLMDQEIIELIGVEEEEDLQTAWGV 706

Query: 1592 RYLLQQENGQ--PAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFST 1419
            R+L   + G+  P Y+H + + SF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIGFST
Sbjct: 707  RHLFVGDKGEPIPKYSHSELELSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFST 766

Query: 1418 TNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNV 1239
            TNP IRVDTL HQ+YYPQRPLFKTVIADCLGR DYS G KD ++RPE FNGQNAIVAVNV
Sbjct: 767  TNPNIRVDTLSHQLYYPQRPLFKTVIADCLGRTDYSPGRKDDVARPEYFNGQNAIVAVNV 826

Query: 1238 HQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGR 1059
            HQGYNQEDSLVMNR SLERGMFRTEHFRSYKAEV+NK+ + R+K KDKV+F K QSKKGR
Sbjct: 827  HQGYNQEDSLVMNRTSLERGMFRTEHFRSYKAEVENKDFTNRLKPKDKVDFGKTQSKKGR 886

Query: 1058 VDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFA 879
            VDSL+DDG P+I A LQSGDIVIGKVAESG+DHS KLKHTEKGMVQKV+LSANDEGKNFA
Sbjct: 887  VDSLDDDGLPYISASLQSGDIVIGKVAESGEDHSIKLKHTEKGMVQKVILSANDEGKNFA 946

Query: 878  VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPG 699
            VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPG
Sbjct: 947  VVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTRQGIVPDIVINPHAFPTRQTPG 1006

Query: 698  QLLEAALGKGIACGGKITYATPFTTPSVDVITEQLH-------------------SLKFQ 576
            QLLEAALGKGIACGG   YATPFTTPSVDVITEQLH                      + 
Sbjct: 1007 QLLEAALGKGIACGGSARYATPFTTPSVDVITEQLHRRVKFTLTVICRVKCYVLMEAGYS 1066

Query: 575  RWGSERVLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF 396
            RWGSE+VLNGRTGE+MRSMIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF
Sbjct: 1067 RWGSEKVLNGRTGEMMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF 1126

Query: 395  GGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRG 219
            GGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMHIC+TC R ANVI R +  G  +RG
Sbjct: 1127 GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCKRAANVILRPVPGGKKIRG 1186

Query: 218  PYCGFCKSAENIVRVNVPYGAKLLFQELFSMGICLKFETEVC 93
            P+CGFC+SAENIV++NVPYGAKLL+QELFS GICLKFETEVC
Sbjct: 1187 PFCGFCRSAENIVKINVPYGAKLLYQELFSTGICLKFETEVC 1228


>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
 ref|XP_009413519.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
          Length = 1198

 Score = 1807 bits (4680), Expect = 0.0
 Identities = 875/1154 (75%), Positives = 996/1154 (86%), Gaps = 3/1154 (0%)
 Frame = -2

Query: 3545 TNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPS 3366
            ++LN+  LEKFCK A++AFF E+GLI HQI+S+N FV  G+Q+LFD+LG+V VEPGYDPS
Sbjct: 45   SDLNIGNLEKFCKEAARAFFKEWGLINHQISSYNDFVEHGIQDLFDTLGDVVVEPGYDPS 104

Query: 3365 KGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKV 3186
            K G G WRHASI +G+VRL+KP FW E++D E+  LKLLP+HARLQNMTYSS++KV+V+V
Sbjct: 105  KKGDGAWRHASITFGKVRLEKPEFWPEKNDIEEGSLKLLPRHARLQNMTYSSQMKVKVRV 164

Query: 3185 QVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSG 3006
            QV++QEKSDKAK G   YI KRV  +++ EI IG +PVMV+S  CWL  L KSDCL+DSG
Sbjct: 165  QVYVQEKSDKAKIGNSSYIQKRVQNDDEGEITIGRLPVMVQSNLCWLSALGKSDCLFDSG 224

Query: 3005 GYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSG 2826
            GYF++KG EK FI QEQRCLTRLW+ D+P  T S  SEIK++R+YVKL++A K +G + G
Sbjct: 225  GYFLIKGMEKTFIGQEQRCLTRLWVIDKPVATVSYLSEIKRKRIYVKLVEAPKAEGFHGG 284

Query: 2825 KLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGF 2646
            K+ISVYFLYATMP+WIMFFALGA+SDKEV +MIDL  CD  + NIILATI+DADEQ+EGF
Sbjct: 285  KVISVYFLYATMPIWIMFFALGASSDKEVLEMIDLKDCDAGMINIILATIKDADEQFEGF 344

Query: 2645 RAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSG 2466
            R+  K+R++VN LIK+AKFPPSESFDEY++KYLFP I GHR KAHFLGY+VKCLLL   G
Sbjct: 345  RSLDKAREHVNALIKNAKFPPSESFDEYVAKYLFPNIIGHRTKAHFLGYMVKCLLLSSFG 404

Query: 2465 KRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDA 2286
            KRKCDNK+DFRNKRLDL GELLA ELRAHIRHAEKRMV+AMQRDL GDRDLQ IERY DA
Sbjct: 405  KRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVRAMQRDLSGDRDLQPIERYLDA 464

Query: 2285 SIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGD 2106
            SIITNGLNRAFSTG W HP++KTER SG+VA L+RTN LQMM+D+R+TR QVAYAGKAGD
Sbjct: 465  SIITNGLNRAFSTGAWTHPYKKTERLSGIVATLRRTNPLQMMSDMRKTRQQVAYAGKAGD 524

Query: 2105 ARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISV 1926
            ARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSS+  EPILDKL++CGMEKLD+IS+
Sbjct: 525  ARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKIMEPILDKLIACGMEKLDEISL 584

Query: 1925 TSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAG 1746
            +SLS+M KVFLNGDW+GVC D  SF    R MRR++ I  QVEIK D++Q+EVR+FTDAG
Sbjct: 585  SSLSQMHKVFLNGDWVGVCPDMSSFADRLRSMRRAKLIHPQVEIKRDKHQKEVRIFTDAG 644

Query: 1745 RLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENG 1566
            R+LRP                V SFQSL+++ +IE IGVEEEEDC TAWGI+YLL    G
Sbjct: 645  RILRPLLIVENLKKIRNLKGGVCSFQSLMDQEIIELIGVEEEEDCQTAWGIKYLLAVNEG 704

Query: 1565 --QPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRVDT 1392
               P Y+HC+ DPSF++GLSCGIIPFA+HN+ARRVL+Q++KHS QAIGFSTTNP IRVDT
Sbjct: 705  ISAPNYSHCELDPSFLLGLSCGIIPFASHNFARRVLYQSEKHSQQAIGFSTTNPSIRVDT 764

Query: 1391 LMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQEDS 1212
            L H +YYPQ PLF+TVIADCL R DYSLG KD M+RPE FNGQNAIVAVNVHQGYNQEDS
Sbjct: 765  LSHHLYYPQTPLFRTVIADCLVRADYSLGRKDSMTRPEYFNGQNAIVAVNVHQGYNQEDS 824

Query: 1211 LVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDDGF 1032
            LVMNR SLERGMFRTEHFRSYKA+VDNKE++KRIK+KDKV F K++SKKGRVDSL+DDGF
Sbjct: 825  LVMNRTSLERGMFRTEHFRSYKADVDNKELTKRIKLKDKVAFGKIESKKGRVDSLDDDGF 884

Query: 1031 PFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS 852
            P+IGA LQSGDIVIGKVAESGDDHS KLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS
Sbjct: 885  PYIGASLQSGDIVIGKVAESGDDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRS 944

Query: 851  PCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAALGK 672
            PCLGDKFSSMHGQKGV+GFLE+QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAALGK
Sbjct: 945  PCLGDKFSSMHGQKGVIGFLETQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGK 1004

Query: 671  GIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTFYQ 492
            GIAC G   YATPF+T SVD IT QLH   + RWGSERVLNGRTGE+M SMIF+GPTFYQ
Sbjct: 1005 GIACEGSKRYATPFSTASVDDITAQLHRAGYSRWGSERVLNGRTGEMMHSMIFMGPTFYQ 1064

Query: 491  RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFT 312
            RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLF 
Sbjct: 1065 RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFM 1124

Query: 311  LSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLFQEL 135
            LSDF QMHIC+ C R  NVI R +  G  +RGPYCGFC+S ENIVR+NVPYGAKLL+QEL
Sbjct: 1125 LSDFFQMHICQKCQRAVNVILRPVPGGKKIRGPYCGFCQSGENIVRINVPYGAKLLYQEL 1184

Query: 134  FSMGICLKFETEVC 93
            FSMGICLKFETEVC
Sbjct: 1185 FSMGICLKFETEVC 1198


>ref|XP_012703111.1| DNA-directed RNA polymerases IV and V subunit 2 [Setaria italica]
 ref|XP_022684018.1| DNA-directed RNA polymerases IV and V subunit 2 [Setaria italica]
 gb|KQK99160.1| hypothetical protein SETIT_009201mg [Setaria italica]
          Length = 1234

 Score = 1720 bits (4455), Expect = 0.0
 Identities = 813/1156 (70%), Positives = 983/1156 (85%), Gaps = 1/1156 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQ+LFDSLG+V VEPG
Sbjct: 82   SNVPIDMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQKLFDSLGDVIVEPG 141

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FW+ + + +   +   P+HARLQNMTY+S++KV
Sbjct: 142  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWSGKDEVD---IDFKPRHARLQNMTYASRIKV 198

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV ++V+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L  L++SDCL
Sbjct: 199  EVTIKVYSLEKSDKSKTGNDDFVQKRDFMNETHWIYIGRLPVMVKSNLCLLHNLKESDCL 258

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQEQRCL+RLW++D+P WT S  SEIK+RR+Y+KL++++K D 
Sbjct: 259  FDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPCWTVSFMSEIKRRRIYIKLVESTKSDD 318

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+ FLYATMP+W+MFFALG +SDKEVF +ID+   D  + N I ATI+++DE 
Sbjct: 319  FSGSKIISISFLYATMPIWLMFFALGISSDKEVFDVIDMQDGDASVINTISATIKESDEL 378

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             EGFR + K+R YV+ L+K+++FPP+ESFD+Y+ ++LFP ISGHR KA FLGY+VKCLL+
Sbjct: 379  CEGFRKSDKARQYVDELVKNSRFPPAESFDDYVDRFLFPDISGHRNKALFLGYMVKCLLM 438

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELLA ELRAHIR AE+RMVKA+QRDL+ DR+LQ +ER
Sbjct: 439  AFTGKRKCDNKDDFRNKRLDLAGELLARELRAHIRLAERRMVKAIQRDLNSDRELQDLER 498

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP++KTERCSG+VA L+RTN LQM++DLR+TR +VAYAG
Sbjct: 499  YLDASIVTNGLNRAFSTGSWCHPYKKTERCSGIVATLRRTNPLQMISDLRKTRQRVAYAG 558

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 559  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVEQPLIESFISCGMSKLN 618

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
            +I   ++ +MDK+FLNG+W+G C+DS SFV+  R MRRS  I  QVEIK D++Q+EVRVF
Sbjct: 619  EIPTENIQRMDKIFLNGNWVGCCTDSASFVLRLRCMRRSSLIHPQVEIKRDKHQKEVRVF 678

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            ++AGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L  
Sbjct: 679  SEAGRILRPLLVVENLNKIRKPKGRSYSFQELIQQEIIEFIGVEEEEDIQCAWGIRHLFG 738

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 739  SEGEISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 798

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQE 1218
            DTL HQ+YYPQRPLFKTVIADCLGR DY++G +D  +RPE FNGQNAIVAVNVHQG+NQE
Sbjct: 799  DTLSHQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFARPEYFNGQNAIVAVNVHQGFNQE 858

Query: 1217 DSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDD 1038
            DSLVMNRASLERGMFRTEH RSYKA+V+NK+++KR+K+K+K++F KM+SK+GRVD+L+DD
Sbjct: 859  DSLVMNRASLERGMFRTEHLRSYKADVENKDVTKRLKMKEKIDFGKMESKRGRVDNLDDD 918

Query: 1037 GFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV 858
            G P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQV
Sbjct: 919  GLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQV 978

Query: 857  RSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAAL 678
            R+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAAL
Sbjct: 979  RTPCLGDKFSSMHGQKGVVGFLESQENFPFTRDGIVPDIVINPHAFPTRQTPGQLLEAAL 1038

Query: 677  GKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTF 498
            GKGIA GG + YATPFTT SVDVI EQLH   F +WG+E V+NGRTGE M+SM+F+GPTF
Sbjct: 1039 GKGIALGGTMRYATPFTTASVDVIAEQLHKAGFSKWGAESVINGRTGERMQSMVFMGPTF 1098

Query: 497  YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 318
            YQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL
Sbjct: 1099 YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 1158

Query: 317  FTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLFQ 141
            F LSDFSQMHIC+ C R ANVI R +  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+Q
Sbjct: 1159 FMLSDFSQMHICQKCERVANVIMRCVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQ 1218

Query: 140  ELFSMGICLKFETEVC 93
            ELFSMGICLKFETEVC
Sbjct: 1219 ELFSMGICLKFETEVC 1234


>ref|XP_020692708.1| DNA-directed RNA polymerases IV and V subunit 2-like [Dendrobium
            catenatum]
 gb|PKU59764.1| DNA-directed RNA polymerase D subunit 2a [Dendrobium catenatum]
          Length = 1214

 Score = 1714 bits (4439), Expect = 0.0
 Identities = 823/1156 (71%), Positives = 983/1156 (85%), Gaps = 4/1156 (0%)
 Frame = -2

Query: 3551 QKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYD 3372
            ++ ++++E LEKF K AS+AFFNE+GL+ HQINS+N FV +GLQ+LFDSLGEV+VEP Y+
Sbjct: 60   ERLDMSMEMLEKFFKDASRAFFNEYGLVSHQINSYNDFVKNGLQDLFDSLGEVAVEPDYN 119

Query: 3371 PSKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVE 3195
            P    G G W+HA++ +G+VRL+KP FW E++D E++ LKL PKHARLQNMTYSS++KV+
Sbjct: 120  PQDAKGDGAWKHATVSFGKVRLEKPVFWVEKNDLEEQELKLTPKHARLQNMTYSSQMKVK 179

Query: 3194 VKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLY 3015
            V+VQV++ + SDKAKTG+D  + KRV+ +++ EIV+G +PVMV+S  CWL + +K+DC +
Sbjct: 180  VRVQVYVHQVSDKAKTGQDAGVHKRVVDDKESEIVLGRLPVMVRSDLCWLHSQDKNDCFF 239

Query: 3014 DSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGL 2835
            D GGYF++KG EK FIAQEQRC+TRLW+TD+P WTA   SE+K+RRVY+KLL+++K +G 
Sbjct: 240  DPGGYFLIKGMEKTFIAQEQRCMTRLWITDKPCWTAQYMSEMKRRRVYIKLLESTKAEGN 299

Query: 2834 NSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQY 2655
            +  K+IS+YFLYATMP+WIMFFALG +SDKEVF+M+DL+G  T + N+IL TIRDADE  
Sbjct: 300  SGVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMMDLEGTSTDVVNMILVTIRDADEMC 359

Query: 2654 EGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLG 2475
            EGFR   K+R++VN LIK AKFPP+ESFDEYI KYLFP I+G R+KA FLGY+ KCLLL 
Sbjct: 360  EGFRRGDKAREFVNKLIKDAKFPPTESFDEYIDKYLFPGITGLRQKALFLGYMAKCLLLS 419

Query: 2474 YSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERY 2295
            Y GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ IERY
Sbjct: 420  YMGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGDDELQFIERY 479

Query: 2294 WDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGK 2115
             D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAGK
Sbjct: 480  LDSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAGK 539

Query: 2114 AGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQ 1935
            AGDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVS + +E I++KL+SCGM+KL+ 
Sbjct: 540  AGDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSLKKSESIIEKLISCGMDKLEG 599

Query: 1934 ISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFT 1755
               +SLSK  KV LNG+WIGVC D++ FV  F+  RR+ QI  QVEIK D  Q+EVR+F+
Sbjct: 600  APFSSLSKRIKVLLNGEWIGVCRDAELFVSKFKQRRRAGQIHPQVEIKRDEQQKEVRIFS 659

Query: 1754 DAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQ 1575
            DAGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWGI+YL ++
Sbjct: 660  DAGRILRPLVIVENLKNVNKFKGGFTSFQSLMDAKIIELIGVEEEEDCRTAWGIKYLYKK 719

Query: 1574 ENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIR 1401
            +  QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP IR
Sbjct: 720  DEKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDIR 779

Query: 1400 VDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            VDTL HQMYYPQ+PLF+T+ A+CLGR DY LG K    RPELFNGQNAIVAVNVHQGYNQ
Sbjct: 780  VDTLTHQMYYPQKPLFRTLTAECLGRPDYCLG-KGHFVRPELFNGQNAIVAVNVHQGYNQ 838

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMN ASL+RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSKKGRVDSLED
Sbjct: 839  EDSLVMNEASLQRGLFRTEHFRSYKADVDNKENSVRLKPKDKVDFGKMQSKKGRVDSLED 898

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P++GA L SGDIVIGKVAESG+DH  KLKHTEKGMVQKV+LS+NDEGKNFAVVTLRQ
Sbjct: 899  DGLPYVGASLNSGDIVIGKVAESGEDHGVKLKHTEKGMVQKVLLSSNDEGKNFAVVTLRQ 958

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VRSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 959  VRSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEAA 1018

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIACGG  TYATPF+TPSVD+I +QL    F RWGSE+V+NGRTGE M+SMIF+GPT
Sbjct: 1019 LGKGIACGGSATYATPFSTPSVDIIYDQLQRSGFCRWGSEKVINGRTGEFMQSMIFMGPT 1078

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKR+GGVKFGEMERDCLLAHGAAANL+ER
Sbjct: 1079 FYQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRYGGVKFGEMERDCLLAHGAAANLYER 1138

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            +FTLSDFS MHIC+TC R ANVIQR +  G  +RGPYC FCKSAENIVR+NVPYGAKLL+
Sbjct: 1139 MFTLSDFSHMHICQTCKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLLY 1198

Query: 143  QELFSMGICLKFETEV 96
            QELFSMGICLKFETE+
Sbjct: 1199 QELFSMGICLKFETEL 1214


>gb|PAN40366.1| hypothetical protein PAHAL_G02501 [Panicum hallii]
 gb|PAN40368.1| hypothetical protein PAHAL_G02501 [Panicum hallii]
          Length = 1233

 Score = 1708 bits (4423), Expect = 0.0
 Identities = 813/1156 (70%), Positives = 977/1156 (84%), Gaps = 1/1156 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV V+PG
Sbjct: 82   SNVPIDVSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVIVDPG 141

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK   G W+HA IK+GRV+L+KP F + + + +   + L P+HARLQNMTY+SK+KV
Sbjct: 142  YDPSKKVSGSWKHAIIKFGRVKLEKPVFLSGKDEVD---IDLKPRHARLQNMTYASKIKV 198

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L + ++SDCL
Sbjct: 199  EVTIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIYIGRLPVMVKSDLCLLHSHKESDCL 258

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQEQRCL+RLW+ D+P WT S  SEIK+RR+Y+KL++++K + 
Sbjct: 259  FDAGGYFLVKGMEKVFIAQEQRCLSRLWIADRPCWTVSFMSEIKRRRIYIKLVESTKSED 318

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+ FLYATMP+W+MFFALG +SDKE F +ID+  CD  + N I ATI+++D  
Sbjct: 319  FSGSKIISISFLYATMPIWLMFFALGISSDKEAFDVIDMQDCDASVVNTISATIKESDGL 378

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             EGFR + K+R YV+ L+K+++FPP+ESFD+Y+ K+LFP ISG+R KA FLGY+VKCLL+
Sbjct: 379  CEGFRKSDKARQYVDKLVKNSRFPPAESFDDYVDKFLFPDISGYRNKALFLGYMVKCLLM 438

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             + GKRKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+RM+KA+QRDL+ DR+LQ + R
Sbjct: 439  AFIGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERRMIKAIQRDLNSDRELQDLAR 498

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 499  YLDASIVTNGLNRAFSTGSWCHPYKRNERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 558

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 559  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCGMSKLN 618

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
            +I   S+ +MDK+FLNG+W+G C+DS SFV+  R MRRS  ID QVEIK D++Q+EVRVF
Sbjct: 619  EIPTESIQRMDKIFLNGNWVGSCTDSASFVLRLRCMRRSSLIDPQVEIKRDKHQKEVRVF 678

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            +DAGRLLRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L  
Sbjct: 679  SDAGRLLRPLLVVENLNKIRKPKGRQYSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFG 738

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 739  SEGEISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 798

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQE 1218
            DTL HQ+YYPQRPLFKTVIADCLGR DY++G +D  SRPE FNGQNAIVAVNVHQG+NQE
Sbjct: 799  DTLSHQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFSRPEYFNGQNAIVAVNVHQGFNQE 858

Query: 1217 DSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLEDD 1038
            DSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K K+K++FAKM+SK+G VD+L+DD
Sbjct: 859  DSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLK-KEKIDFAKMESKRGCVDNLDDD 917

Query: 1037 GFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQV 858
            G P+IGA LQ+ DI+IGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQV
Sbjct: 918  GLPYIGASLQTNDIIIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQV 977

Query: 857  RSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAAL 678
            R+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAAL
Sbjct: 978  RTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAAL 1037

Query: 677  GKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPTF 498
            GKGIA GG + YATPFTT SVDVI EQLH   F +WG+E V+NGRTGE M+S++F+GPTF
Sbjct: 1038 GKGIALGGTMRYATPFTTASVDVIAEQLHKFGFSKWGAESVINGRTGERMQSLVFMGPTF 1097

Query: 497  YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 318
            YQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL
Sbjct: 1098 YQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERL 1157

Query: 317  FTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLFQ 141
            F LSDFSQMHIC+TC R ANVI R +  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+Q
Sbjct: 1158 FMLSDFSQMHICQTCERVANVIMRCVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQ 1217

Query: 140  ELFSMGICLKFETEVC 93
            ELFSMGICLKFETEVC
Sbjct: 1218 ELFSMGICLKFETEVC 1233


>ref|XP_020593256.1| DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
            [Phalaenopsis equestris]
          Length = 1216

 Score = 1705 bits (4415), Expect = 0.0
 Identities = 819/1157 (70%), Positives = 984/1157 (85%), Gaps = 4/1157 (0%)
 Frame = -2

Query: 3554 DQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGY 3375
            D++ ++++E LEKF K AS+AFFNE+GL+ HQINS+N+F+ +GLQELFDSLG V+VEP Y
Sbjct: 62   DEQLDMSLEMLEKFFKGASRAFFNEYGLVSHQINSYNEFIKNGLQELFDSLGAVAVEPDY 121

Query: 3374 DPSKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            +P      G W+HA++ +G+VRL+KP FW E++D +++ LKL PKHARLQNMTYS+++KV
Sbjct: 122  NPQDAKNDGSWKHATVTFGKVRLEKPVFWVEKNDLDEQELKLTPKHARLQNMTYSAQMKV 181

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            +V+VQV++   SDKAKTG+D  + K ++ +++ EIV+G +PVMV+S  CWL + +K+DC 
Sbjct: 182  KVRVQVYVHRVSDKAKTGQDAGVHKMLVDDKESEIVLGRLPVMVRSDLCWLPSQDKNDCF 241

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D GGYF++KG EK FIAQEQRCLTRLW+TD+P WT    SEIK+RRVY+KLL+++K +G
Sbjct: 242  FDPGGYFLIKGMEKTFIAQEQRCLTRLWITDKPCWTVQYMSEIKRRRVYIKLLESTKAEG 301

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+YFLYATMP+WIMFFALG +SDKEVF+MIDLDG  T + N+ILATIRDAD  
Sbjct: 302  NSGVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMIDLDGTSTDVVNMILATIRDADGM 361

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             EGFR  GK+RD+VN LIK AKFPP+ESFDEYI+K+LFP I+G R+KA FLGY++KCLLL
Sbjct: 362  CEGFRRGGKARDFVNKLIKDAKFPPTESFDEYINKFLFPGITGLRQKALFLGYMIKCLLL 421

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             Y GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ  ER
Sbjct: 422  SYMGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGD-ELQFTER 480

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAG
Sbjct: 481  YLDSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAG 540

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVSS+ +E IL+ L+SCGM+KL+
Sbjct: 541  KAGDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSSKLSETILEVLISCGMDKLE 600

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
               ++SLSK  KV LNG+WIGVC D++SFV  F+  RR  QI  QVEIK D +Q+EVR+F
Sbjct: 601  GAPLSSLSKRVKVLLNGEWIGVCRDAESFVSKFKRSRRGGQIHPQVEIKRDDHQKEVRIF 660

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            TDAGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWG++YL +
Sbjct: 661  TDAGRILRPLVIVENLKNVNKYKGGFASFQSLMDAKIIELIGVEEEEDCRTAWGVKYLFK 720

Query: 1577 QENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 1404
            +++ QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP I
Sbjct: 721  KDDKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDI 780

Query: 1403 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 1224
            RVDTL HQMYYPQ+PLF+T+ A+CLG  DY  G K  + RPELFNGQNAIVAVNVH GYN
Sbjct: 781  RVDTLTHQMYYPQKPLFRTMTAECLGMSDYRFG-KGHIVRPELFNGQNAIVAVNVHLGYN 839

Query: 1223 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 1044
            QEDSLVMN AS++RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSK+GRVDSLE
Sbjct: 840  QEDSLVMNEASVQRGLFRTEHFRSYKADVDNKENSLRLKPKDKVDFGKMQSKRGRVDSLE 899

Query: 1043 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 864
            DDG P++GA L SGDIV+GKVAESG+DH  KLKHTEKG+VQKV+LS+NDEGKNFAVVTLR
Sbjct: 900  DDGLPYVGAYLNSGDIVVGKVAESGEDHGVKLKHTEKGVVQKVLLSSNDEGKNFAVVTLR 959

Query: 863  QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 684
            QVRSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 960  QVRSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1019

Query: 683  ALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGP 504
            ALGKGIACGG  TYATPF+TPSVDVI +QL    F RWGSE+V+NGRTGE+M+SMIF+GP
Sbjct: 1020 ALGKGIACGGSTTYATPFSTPSVDVIYDQLQRSGFCRWGSEKVINGRTGELMQSMIFMGP 1079

Query: 503  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 324
            TFYQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL+E
Sbjct: 1080 TFYQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLYE 1139

Query: 323  RLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLL 147
            R+FTLSDFSQMHIC+ C R ANVIQR +  G  +RGPYC FCKSAENIVR+NVPYGAKLL
Sbjct: 1140 RMFTLSDFSQMHICQICKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLL 1199

Query: 146  FQELFSMGICLKFETEV 96
            +QELFSMGICLKFETEV
Sbjct: 1200 YQELFSMGICLKFETEV 1216


>ref|XP_020593257.1| DNA-directed RNA polymerases IV and V subunit 2-like isoform X2
            [Phalaenopsis equestris]
          Length = 1198

 Score = 1705 bits (4415), Expect = 0.0
 Identities = 819/1157 (70%), Positives = 984/1157 (85%), Gaps = 4/1157 (0%)
 Frame = -2

Query: 3554 DQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGY 3375
            D++ ++++E LEKF K AS+AFFNE+GL+ HQINS+N+F+ +GLQELFDSLG V+VEP Y
Sbjct: 44   DEQLDMSLEMLEKFFKGASRAFFNEYGLVSHQINSYNEFIKNGLQELFDSLGAVAVEPDY 103

Query: 3374 DPSKG-GGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            +P      G W+HA++ +G+VRL+KP FW E++D +++ LKL PKHARLQNMTYS+++KV
Sbjct: 104  NPQDAKNDGSWKHATVTFGKVRLEKPVFWVEKNDLDEQELKLTPKHARLQNMTYSAQMKV 163

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            +V+VQV++   SDKAKTG+D  + K ++ +++ EIV+G +PVMV+S  CWL + +K+DC 
Sbjct: 164  KVRVQVYVHRVSDKAKTGQDAGVHKMLVDDKESEIVLGRLPVMVRSDLCWLPSQDKNDCF 223

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D GGYF++KG EK FIAQEQRCLTRLW+TD+P WT    SEIK+RRVY+KLL+++K +G
Sbjct: 224  FDPGGYFLIKGMEKTFIAQEQRCLTRLWITDKPCWTVQYMSEIKRRRVYIKLLESTKAEG 283

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+YFLYATMP+WIMFFALG +SDKEVF+MIDLDG  T + N+ILATIRDAD  
Sbjct: 284  NSGVKMISLYFLYATMPIWIMFFALGVSSDKEVFEMIDLDGTSTDVVNMILATIRDADGM 343

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             EGFR  GK+RD+VN LIK AKFPP+ESFDEYI+K+LFP I+G R+KA FLGY++KCLLL
Sbjct: 344  CEGFRRGGKARDFVNKLIKDAKFPPTESFDEYINKFLFPGITGLRQKALFLGYMIKCLLL 403

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             Y GKRKCDNK+DFRNKRL+L G+LL+ EL +HIRHAE+RMVKAMQRDL+GD +LQ  ER
Sbjct: 404  SYMGKRKCDNKDDFRNKRLELAGKLLSRELWSHIRHAERRMVKAMQRDLNGD-ELQFTER 462

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y D+SIITNGLNRAFSTG WCHP+++TER +G+VA L+RTN LQ+++DLR+TR  V YAG
Sbjct: 463  YLDSSIITNGLNRAFSTGQWCHPYKRTERTAGIVATLRRTNPLQLISDLRKTRQSVLYAG 522

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSY+G+LCFLSTPDGENCGLVKNL++TALVSS+ +E IL+ L+SCGM+KL+
Sbjct: 523  KAGDARYPNPSYFGRLCFLSTPDGENCGLVKNLAITALVSSKLSETILEVLISCGMDKLE 582

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
               ++SLSK  KV LNG+WIGVC D++SFV  F+  RR  QI  QVEIK D +Q+EVR+F
Sbjct: 583  GAPLSSLSKRVKVLLNGEWIGVCRDAESFVSKFKRSRRGGQIHPQVEIKRDDHQKEVRIF 642

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            TDAGR+LRP                 +SFQSL++  +IE IGVEEEEDC TAWG++YL +
Sbjct: 643  TDAGRILRPLVIVENLKNVNKYKGGFASFQSLMDAKIIELIGVEEEEDCRTAWGVKYLFK 702

Query: 1577 QENGQPA--YTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGI 1404
            +++ QP   YTHC+ D SF++ LSCGIIPFANHN+ARRVL+QA+KHS QAIGFSTTNP I
Sbjct: 703  KDDKQPIVNYTHCELDLSFLLALSCGIIPFANHNFARRVLYQAEKHSQQAIGFSTTNPDI 762

Query: 1403 RVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFNGQNAIVAVNVHQGYN 1224
            RVDTL HQMYYPQ+PLF+T+ A+CLG  DY  G K  + RPELFNGQNAIVAVNVH GYN
Sbjct: 763  RVDTLTHQMYYPQKPLFRTMTAECLGMSDYRFG-KGHIVRPELFNGQNAIVAVNVHLGYN 821

Query: 1223 QEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLE 1044
            QEDSLVMN AS++RG+FRTEHFRSYKA+VDNKE S R+K KDKV+F KMQSK+GRVDSLE
Sbjct: 822  QEDSLVMNEASVQRGLFRTEHFRSYKADVDNKENSLRLKPKDKVDFGKMQSKRGRVDSLE 881

Query: 1043 DDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLR 864
            DDG P++GA L SGDIV+GKVAESG+DH  KLKHTEKG+VQKV+LS+NDEGKNFAVVTLR
Sbjct: 882  DDGLPYVGAYLNSGDIVVGKVAESGEDHGVKLKHTEKGVVQKVLLSSNDEGKNFAVVTLR 941

Query: 863  QVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEA 684
            QVRSP LGDKFSSMHGQKGV+G LE QENFPFT  G+VPDIVINPHAFPTRQTPGQLLEA
Sbjct: 942  QVRSPRLGDKFSSMHGQKGVIGLLEHQENFPFTRQGIVPDIVINPHAFPTRQTPGQLLEA 1001

Query: 683  ALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGP 504
            ALGKGIACGG  TYATPF+TPSVDVI +QL    F RWGSE+V+NGRTGE+M+SMIF+GP
Sbjct: 1002 ALGKGIACGGSTTYATPFSTPSVDVIYDQLQRSGFCRWGSEKVINGRTGELMQSMIFMGP 1061

Query: 503  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 324
            TFYQRLIHMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL+E
Sbjct: 1062 TFYQRLIHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLYE 1121

Query: 323  RLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLL 147
            R+FTLSDFSQMHIC+ C R ANVIQR +  G  +RGPYC FCKSAENIVR+NVPYGAKLL
Sbjct: 1122 RMFTLSDFSQMHICQICKRAANVIQRPVLGGRKIRGPYCVFCKSAENIVRINVPYGAKLL 1181

Query: 146  FQELFSMGICLKFETEV 96
            +QELFSMGICLKFETEV
Sbjct: 1182 YQELFSMGICLKFETEV 1198


>ref|XP_002468227.1| DNA-directed RNA polymerases IV and V subunit 2 [Sorghum bicolor]
 gb|EER95225.1| hypothetical protein SORBI_3001G448100 [Sorghum bicolor]
          Length = 1228

 Score = 1699 bits (4399), Expect = 0.0
 Identities = 811/1157 (70%), Positives = 972/1157 (84%), Gaps = 2/1157 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +L+VE+LEKFCK AS++FF+E GLI HQINS+N FV+ GLQELFDSLGEV VEPG
Sbjct: 75   SNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSLGEVIVEPG 134

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L V
Sbjct: 135  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLIV 191

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L++S+CL
Sbjct: 192  EVNIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLCLLHSLKESECL 251

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQE RCL RLW+ D+P W  S  SE+K+RR+Y+KL+++++ + 
Sbjct: 252  FDAGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIYIKLVESTRSED 311

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI+++DE 
Sbjct: 312  FSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDEL 371

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             EGFR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+VKCLL+
Sbjct: 372  CEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLM 431

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELL  ELRAH+R AEKRMVKA+QRDL+ DR+LQ +ER
Sbjct: 432  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRELQDLER 491

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGL+RAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 492  YIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 551

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 552  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCGMSKLN 611

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
             I    + +MDK+FLNG+W+G C DS SFV   R MRRS  ID QVEIK D++ +EVRVF
Sbjct: 612  DIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIKRDKHHKEVRVF 671

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            +DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 672  SDAGRILRPLLVVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 731

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 732  SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 791

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            DTL HQ+YYPQRPLFKTVIADCLGR DY + G KD   RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 792  DTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNAIVAVNVHQGFNQ 851

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 852  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 911

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 912  DGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 971

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 972  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPTRQTPGQLLEAA 1031

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S+IF+GPT
Sbjct: 1032 LGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGTENVLNGRTGERMQSLIFMGPT 1091

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1092 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1151

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            LF LSDFSQMHIC+TC R ANV+ R++S G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+
Sbjct: 1152 LFMLSDFSQMHICQTCERVANVVMRSVSGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1211

Query: 143  QELFSMGICLKFETEVC 93
            QELFSMGICLKF+TEVC
Sbjct: 1212 QELFSMGICLKFDTEVC 1228


>ref|XP_015636222.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Oryza
            sativa Japonica Group]
 dbj|BAS91258.1| Os04g0641000 [Oryza sativa Japonica Group]
          Length = 1252

 Score = 1698 bits (4398), Expect = 0.0
 Identities = 815/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 77   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 136

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 137  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 196

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 197  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 256

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 257  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 316

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 2643
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 317  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 376

Query: 2642 AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 2463
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 377  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 436

Query: 2462 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 2283
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 437  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 496

Query: 2282 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 2103
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 497  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 556

Query: 2102 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1923
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 557  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 616

Query: 1922 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1743
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 617  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 676

Query: 1742 LLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 1563
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 677  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 736

Query: 1562 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 1449
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 737  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 796

Query: 1448 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 1269
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 797  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 856

Query: 1268 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 1098
            GQNAIVAVNVHQG+NQEDSLVMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 857  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 916

Query: 1097 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 918
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 917  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 976

Query: 917  VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 738
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 977  VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1036

Query: 737  INPHAFPTRQTPGQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSER 558
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1037 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1096

Query: 557  VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 378
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1097 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1156

Query: 377  EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 201
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1157 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1216

Query: 200  KSAENIVRVNVPYGAKLLFQELFSMGICLKFETEVC 93
            +S+ENIVR+NVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1217 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1252


>gb|AQK46524.1| DNA-directed RNA polymerases IV and V subunit 2 [Zea mays]
 gb|AQK46537.1| DNA-directed RNA polymerases IV and V subunit 2 [Zea mays]
          Length = 1229

 Score = 1697 bits (4396), Expect = 0.0
 Identities = 807/1157 (69%), Positives = 974/1157 (84%), Gaps = 2/1157 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   N++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNPPINMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L+V
Sbjct: 136  YDPSKKGSGSWKHAIIKFGRVKLEKPVFWTGK---DEVSVDFKPWHARLQNMTYASRLRV 192

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L++S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECL 252

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQE RCL RLW++D+P WT S  SE+K+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRRRIYIKLVESTRSED 312

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI+++DE 
Sbjct: 313  FSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDEL 372

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
              GFR + K+R YV+ L+KS+KFPP ESFD+YI+K+LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CGGFRKSDKARQYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYMVKCLLM 432

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELL  ELRAH+R AE+RMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRELQDLER 492

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VT++VSS+  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTSIVSSKVVQPLIESFISCGMNKLN 612

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
             I    + +MDK+FLNG+W+G CSDS SFV   R MRRS  ID QVEIK D++ +EVR+F
Sbjct: 613  DIPTEHIQRMDKIFLNGNWLGSCSDSASFVFRLRCMRRSSLIDPQVEIKRDKHYKEVRLF 672

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            +DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  SDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+ST+NP IRV
Sbjct: 733  SEGAISSYTHCELDPSFILGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTSNPRIRV 792

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRD-YSLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            DTL HQ+YYPQRPLFKTVIADCLGR D  + G KD  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDCTTFGRKDDFTRPEYFNGQNAIVAVNVHQGFNQ 852

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHDGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMKSLVFMGPT 1092

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHM+EDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+
Sbjct: 1153 LFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 143  QELFSMGICLKFETEVC 93
            QELFSMGICLKFETEVC
Sbjct: 1213 QELFSMGICLKFETEVC 1229


>dbj|BAF15955.1| Os04g0641000, partial [Oryza sativa Japonica Group]
          Length = 1270

 Score = 1697 bits (4395), Expect = 0.0
 Identities = 814/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 95   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 154

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 155  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 214

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 215  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 274

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 275  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 334

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 2643
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 335  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 394

Query: 2642 AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 2463
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 395  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 454

Query: 2462 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 2283
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 455  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 514

Query: 2282 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 2103
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 515  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 574

Query: 2102 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1923
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 575  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 634

Query: 1922 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1743
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 635  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 694

Query: 1742 LLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 1563
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 695  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 754

Query: 1562 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 1449
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 755  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 814

Query: 1448 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 1269
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 815  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 874

Query: 1268 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 1098
            GQNAIVAVNVHQG+NQEDS+VMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 875  GQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 934

Query: 1097 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 918
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 935  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 994

Query: 917  VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 738
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 995  VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1054

Query: 737  INPHAFPTRQTPGQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSER 558
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1055 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1114

Query: 557  VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 378
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1115 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1174

Query: 377  EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 201
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1175 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1234

Query: 200  KSAENIVRVNVPYGAKLLFQELFSMGICLKFETEVC 93
            +S+ENIVR+NVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1235 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1270


>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score = 1697 bits (4395), Expect = 0.0
 Identities = 814/1176 (69%), Positives = 971/1176 (82%), Gaps = 26/1176 (2%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            ++++ +LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV+VEP YDPS 
Sbjct: 141  DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSN 200

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
             G G WRHA IK+GRV+L++P FW+   D +++ LKL P+HARLQNMTYSSK+KVEV  Q
Sbjct: 201  RGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQ 260

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+  EKSDKAKTG D +  KR +  E   I IG +PVMV S  CWL  L++SDC +DSGG
Sbjct: 261  VYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 320

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQ+CLTR+W+ D+P W  S  S I++RR+Y+KL+D++  +  + GK
Sbjct: 321  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 380

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 2643
            +IS+ FLYA MP+W+MFFALG +SDK++F +I+++ CD  + N I ATI+++DE  EGFR
Sbjct: 381  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 440

Query: 2642 AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 2463
             + K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 441  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 500

Query: 2462 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 2283
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ +R+LQ  + Y DAS
Sbjct: 501  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 560

Query: 2282 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 2103
            IITNGLNRAFSTG WCHP+++ ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 561  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 620

Query: 2102 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1923
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA VSSR   P++D+ +SCGM KL +I   
Sbjct: 621  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTE 680

Query: 1922 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1743
             + +MDK+FLNGDW+G CSD  SFV+  R MRRS  ID QVEIK D++QREVRVF+DAGR
Sbjct: 681  EVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGR 740

Query: 1742 LLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQENGQ 1563
            +LRP                  SFQ L+ + +IEFIGVEEEED  +AWGIR L + E   
Sbjct: 741  ILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEA 800

Query: 1562 P----------------------AYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQK 1449
            P                       YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++K
Sbjct: 801  PMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEK 860

Query: 1448 HSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELFN 1269
            HS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTVIADC+GR +Y+ G KD  +RPE FN
Sbjct: 861  HSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFN 920

Query: 1268 GQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNK---EMSKRIKIKD 1098
            GQNAIVAVNVHQG+NQEDS+VMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+KD
Sbjct: 921  GQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKD 980

Query: 1097 KVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQK 918
            K++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ+
Sbjct: 981  KIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQR 1040

Query: 917  VVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIV 738
            V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIV
Sbjct: 1041 VLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIV 1100

Query: 737  INPHAFPTRQTPGQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSER 558
            INPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E 
Sbjct: 1101 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAES 1160

Query: 557  VLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 378
            VLNGRTGE M S+IF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1161 VLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1220

Query: 377  EMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFC 201
            EMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC R ANVI R +  G  +RGPYCGFC
Sbjct: 1221 EMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFC 1280

Query: 200  KSAENIVRVNVPYGAKLLFQELFSMGICLKFETEVC 93
            +S+ENIVR+NVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1281 RSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1316


>ref|NP_001338873.1| required to maintain repression 7 [Zea mays]
 gb|ADB19857.1| required to maintain repression 7/RNA polymerase D second largest
            subunit [Zea mays]
 gb|ADI24118.1| RPD2/E2a [Zea mays]
 gb|ONM13141.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13145.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13149.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13152.1| nuclear RNA polymerase D2/E2 [Zea mays]
 gb|ONM13153.1| nuclear RNA polymerase D2/E2 [Zea mays]
          Length = 1229

 Score = 1696 bits (4391), Expect = 0.0
 Identities = 808/1157 (69%), Positives = 972/1157 (84%), Gaps = 2/1157 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L V
Sbjct: 136  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLIV 192

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L +S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECL 252

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P WT S  SEIK+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSED 312

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+I++ FLYATMPVW++FFALG +SDKEVF MID+  CD  + N I ATI+++D+ 
Sbjct: 313  FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKL 372

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             E FR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLM 432

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R AEKRMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLER 492

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLN 612

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
             I    + +MDK+FLNG+W+G C +S SFV   R MRRS  ID QVEIK D++  EVRVF
Sbjct: 613  DIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVF 672

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            TDAGR+LRP                  SF  L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  TDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 733  SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 792

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            DTL HQ+YYPQRPLFKTVIADCLGR DY S G K+  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQ 852

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P++GA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWGSE VLNGRTGE ++S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPT 1092

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+
Sbjct: 1153 LFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 143  QELFSMGICLKFETEVC 93
            QELFSMGICLKFET+VC
Sbjct: 1213 QELFSMGICLKFETQVC 1229


>ref|XP_002447199.1| DNA-directed RNA polymerases IV and V subunit 2 [Sorghum bicolor]
 gb|EES11527.1| hypothetical protein SORBI_3006G236000 [Sorghum bicolor]
 gb|KXG27149.2| hypothetical protein SORBI_3006G236000 [Sorghum bicolor]
          Length = 1239

 Score = 1696 bits (4391), Expect = 0.0
 Identities = 805/1157 (69%), Positives = 972/1157 (84%), Gaps = 2/1157 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 86   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 145

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+LKV
Sbjct: 146  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLKV 202

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG + ++ KR    E   I IG +PVMVKS  C L +L++S+CL
Sbjct: 203  EVTIQVYSLEKSDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECL 262

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P W  S   EIK+RR+Y+KL+++++ + 
Sbjct: 263  FDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRRIYIKLVESTRSED 322

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+IS+ FLYATMPVW++FFALG +SDKE F +ID+  CD  + N I ATI+++DE 
Sbjct: 323  FSGSKVISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDEL 382

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             +GFR + K+R YV+ L+KS++FPP+ESFD+Y++++LFP I+G+R KA FLGY+VKCLL+
Sbjct: 383  CKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYMVKCLLM 442

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R  E+RMVKA+QRDL+ DR+LQ +ER
Sbjct: 443  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDRELQDLER 502

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 503  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 562

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 563  KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQPLIESFISCGMSKLN 622

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
             I    + +MDK+FLNG+W+G C DS SFV   R MRRS  ID QVEIK D++ +EVRVF
Sbjct: 623  DIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQVEIKRDKHHKEVRVF 682

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            +DAGR+LRP                  SFQ L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 683  SDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 742

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF+MGLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 743  SEGAISSYTHCELDPSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 802

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            DTL HQ+YYPQRPLFKTVIADCLGR DY + G KD  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 803  DTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYTRPEYFNGQNAIVAVNVHQGFNQ 862

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMNRASLERGMFRTEH RSYK +V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 863  EDSLVMNRASLERGMFRTEHLRSYKTDVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 922

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P+IGA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 923  DGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 982

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 983  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1042

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWG+E VLNGRTGE M+S++F+GPT
Sbjct: 1043 LGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWGAENVLNGRTGERMQSLVFMGPT 1102

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1103 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1162

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+
Sbjct: 1163 LFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1222

Query: 143  QELFSMGICLKFETEVC 93
            QELFSMGICLKF+TEVC
Sbjct: 1223 QELFSMGICLKFDTEVC 1239


>ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Oryza brachyantha]
          Length = 1250

 Score = 1693 bits (4385), Expect = 0.0
 Identities = 813/1177 (69%), Positives = 966/1177 (82%), Gaps = 27/1177 (2%)
 Frame = -2

Query: 3542 NLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPGYDPSK 3363
            ++++ +LEKFCK AS++FF+E GLI HQINS+N FV  GLQELFDSLGEV+VEP YDPS 
Sbjct: 77   DMSIPSLEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELFDSLGEVTVEPSYDPSN 136

Query: 3362 GGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKVEVKVQ 3183
             G G WRHA IK+GRV+L++P FW    D ++E LKL P+HARLQNMTYSSK+KVEV +Q
Sbjct: 137  RGPGGWRHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARLQNMTYSSKMKVEVHIQ 196

Query: 3182 VFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCLYDSGG 3003
            V+  EKSDKAKTG D +  K+ +  E   I  G +PVMV S  CWL  L++SDC +DSGG
Sbjct: 197  VYSMEKSDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLCWLHKLKESDCQFDSGG 256

Query: 3002 YFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDGLNSGK 2823
            YF++KG EK FIAQEQ+CLTR+W+ ++P WT S  S I++RR+Y+KL+D++K +     K
Sbjct: 257  YFLIKGMEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIYIKLIDSTKNE---DRK 313

Query: 2822 LISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQYEGFR 2643
            +IS+ FLYA MP+W+MFFALG TSDK+VF +ID+  CD  + N I ATI+++DE  EGFR
Sbjct: 314  IISISFLYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISATIKESDELCEGFR 373

Query: 2642 AAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLLGYSGK 2463
             + ++R YV+ LIK +KFPP E FD+Y+++YLFP ISG+R KA FLGY+VKCLL+ ++GK
Sbjct: 374  KSDRARQYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLGYMVKCLLMAFTGK 433

Query: 2462 RKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIERYWDAS 2283
            RKCDNK+DFRNKRLDL GELL  ELRAHIRHAE+ MVKA+QRDL+ DR+LQ ++RY DAS
Sbjct: 434  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSDRELQELDRYLDAS 493

Query: 2282 IITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAGKAGDA 2103
            IITNGLNRAFSTG WCHP++K ERC+G+VA L+RTN LQM++DLR+TR +VAYAGKAGDA
Sbjct: 494  IITNGLNRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 553

Query: 2102 RYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLDQISVT 1923
            RYPNPSYWGKLCF+STPDGENCGLVKNL+VTA+VSSR  +P++++ +SCGM KL +I   
Sbjct: 554  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFISCGMNKLHEIPTE 613

Query: 1922 SLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVFTDAGR 1743
             + KMDK+FLNGDW+G C+D  SFV+  R MRRS  I  QVEIK D++QREVRVF+DAGR
Sbjct: 614  EVPKMDKIFLNGDWVGSCTDPASFVLRLRCMRRSGLIGPQVEIKWDKHQREVRVFSDAGR 673

Query: 1742 LLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQQ---- 1575
            +LRP                  SFQSL+ + +IEFIGVEEEED  +AWGIR+L       
Sbjct: 674  ILRPLLVVENLNKIRRPKGGSYSFQSLMQQEIIEFIGVEEEEDTKSAWGIRHLFGSEGEK 733

Query: 1574 -------------------ENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQ 1452
                               E G   YTHC+ D SF++GLSCGIIPFANHN+ARRVL+Q++
Sbjct: 734  AALVKTNRTEDAFTIRRDIEEGVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 793

Query: 1451 KHSHQAIGFSTTNPGIRVDTLMHQMYYPQRPLFKTVIADCLGRRDYSLGLKDGMSRPELF 1272
            KHS QAIG+STTNP IRVDTL HQ+YYPQRPLFKTV+ADC+GR +Y+ G KD  +RPE F
Sbjct: 794  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVVADCIGRSEYTFGRKDDFARPEYF 853

Query: 1271 NGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVDNKEM---SKRIKIK 1101
            NGQNAIVAVNVHQG+NQEDSLVMNRASLERGMFRTEHFR+YKAEV+NK     +KR+K+K
Sbjct: 854  NGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKSAPGGNKRLKMK 913

Query: 1100 DKVEFAKMQSKKGRVDSLEDDGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQ 921
            DK++F KMQSK+GRVD+L+DDG P++GA LQSGDIVIGKV+ESG+DHS KLKHTEKGMVQ
Sbjct: 914  DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ 973

Query: 920  KVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDI 741
            +V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGV+GFLESQENFPFT  G+VPDI
Sbjct: 974  RVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLESQENFPFTCQGIVPDI 1033

Query: 740  VINPHAFPTRQTPGQLLEAALGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSE 561
            VINPHAFPTRQTPGQLLEAALGKGIA GG + YATPFTT S DVIT+QLH   F RWG+E
Sbjct: 1034 VINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAE 1093

Query: 560  RVLNGRTGEIMRSMIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 381
             VLNGRTGE M S+IF+GP FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1094 SVLNGRTGERMHSLIFMGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1153

Query: 380  GEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGF 204
            GEMERDCLLAHGAAANLHERLF LSDFSQMHIC+TC R ANVI R +  G  +RGPYCGF
Sbjct: 1154 GEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCERVANVIMRPVPGGKKIRGPYCGF 1213

Query: 203  CKSAENIVRVNVPYGAKLLFQELFSMGICLKFETEVC 93
            C+S+ENI R+NVPYGAKLL+QELFSMGICL+FETEVC
Sbjct: 1214 CRSSENIARINVPYGAKLLYQELFSMGICLRFETEVC 1250


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score = 1692 bits (4383), Expect = 0.0
 Identities = 807/1157 (69%), Positives = 971/1157 (83%), Gaps = 2/1157 (0%)
 Frame = -2

Query: 3557 SDQKTNLNVETLEKFCKHASQAFFNEFGLIGHQINSFNQFVTSGLQELFDSLGEVSVEPG 3378
            S+   +++VE+LEKFCK AS++FF+E GLI HQINS+N+FV+ GLQELFDSLGEV VEPG
Sbjct: 76   SNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPG 135

Query: 3377 YDPSKGGGGDWRHASIKYGRVRLDKPSFWTERSDQEDECLKLLPKHARLQNMTYSSKLKV 3198
            YDPSK G G W+HA IK+GRV+L+KP FWT +   ++  +   P HARLQNMTY+S+L V
Sbjct: 136  YDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHARLQNMTYASRLIV 192

Query: 3197 EVKVQVFIQEKSDKAKTGKDPYISKRVLTEEKKEIVIGSIPVMVKSKQCWLDTLEKSDCL 3018
            EV +QV+  EKSDK+KTG D ++ KR    E   I IG +PVMVKS  C L +L +S+CL
Sbjct: 193  EVTIQVYSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLNESECL 252

Query: 3017 YDSGGYFIVKGAEKAFIAQEQRCLTRLWLTDQPTWTASLGSEIKKRRVYVKLLDASKIDG 2838
            +D+GGYF+VKG EK FIAQEQRCL RLW++D+P WT S  SEIK+RR+Y+KL+++++ + 
Sbjct: 253  FDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRRIYIKLVESTRSED 312

Query: 2837 LNSGKLISVYFLYATMPVWIMFFALGATSDKEVFQMIDLDGCDTKLTNIILATIRDADEQ 2658
             +  K+I++ FLYATMPVW++FFALG +SDKEVF MID+  CD  + N I ATI+++D+ 
Sbjct: 313  FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATIKESDKL 372

Query: 2657 YEGFRAAGKSRDYVNNLIKSAKFPPSESFDEYISKYLFPTISGHREKAHFLGYIVKCLLL 2478
             E FR + K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA FLGY+VKCLL+
Sbjct: 373  CEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLM 432

Query: 2477 GYSGKRKCDNKEDFRNKRLDLVGELLATELRAHIRHAEKRMVKAMQRDLHGDRDLQLIER 2298
             ++GKRKCDNK+DFRNKRLDL GELL  ELRA +R AEKRMVKA+QRDL+ DR+LQ +ER
Sbjct: 433  AFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRELQDLER 492

Query: 2297 YWDASIITNGLNRAFSTGHWCHPFRKTERCSGVVANLQRTNALQMMADLRRTRLQVAYAG 2118
            Y DASI+TNGLNRAFSTG WCHP+++ ERCSG+VA L+RTN LQMM+DLR+TR +VAYAG
Sbjct: 493  YIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAG 552

Query: 2117 KAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLSVTALVSSRTNEPILDKLVSCGMEKLD 1938
            KAGDARYPNPSYW KLCF+STPDGENCGLVKNL+VTA+VSSR  +P+++  +SCGM KL+
Sbjct: 553  KAGDARYPNPSYWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQPLIESFISCGMSKLN 612

Query: 1937 QISVTSLSKMDKVFLNGDWIGVCSDSKSFVVSFRHMRRSQQIDSQVEIKLDRYQREVRVF 1758
             I    + +MDK+FLNG+W+G C +S SFV   R MRRS  ID QVEIK D++  EVRVF
Sbjct: 613  DIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVF 672

Query: 1757 TDAGRLLRPXXXXXXXXXXXXXXXXVSSFQSLVNEGLIEFIGVEEEEDCITAWGIRYLLQ 1578
            TDAGR+LRP                  SF  L+ + +IEFIGVEEEED   AWGIR+L +
Sbjct: 673  TDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEEEDIQCAWGIRHLFE 732

Query: 1577 QENGQPAYTHCDFDPSFVMGLSCGIIPFANHNYARRVLFQAQKHSHQAIGFSTTNPGIRV 1398
             E    +YTHC+ DPSF++GLSCGIIPFANHN+ARRVL+Q++KHS QAIG+STTNP IRV
Sbjct: 733  SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRV 792

Query: 1397 DTLMHQMYYPQRPLFKTVIADCLGRRDY-SLGLKDGMSRPELFNGQNAIVAVNVHQGYNQ 1221
            DTL HQ+YYPQRPLFKTVIADCLGR DY S G K+  +RPE FNGQNAIVAVNVHQG+NQ
Sbjct: 793  DTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQ 852

Query: 1220 EDSLVMNRASLERGMFRTEHFRSYKAEVDNKEMSKRIKIKDKVEFAKMQSKKGRVDSLED 1041
            EDSLVMNRASLERGMFRTEH RSYKA+V+NK+ +KR+K+K+K++F K +SK+GRVD+L+D
Sbjct: 853  EDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDD 912

Query: 1040 DGFPFIGACLQSGDIVIGKVAESGDDHSTKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQ 861
            DG P++GA LQ+ DIVIGKV+ESG+DHS KLKHTEKGMVQKV+LSANDEGKNFAVVTLRQ
Sbjct: 913  DGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAVVTLRQ 972

Query: 860  VRSPCLGDKFSSMHGQKGVVGFLESQENFPFTSAGVVPDIVINPHAFPTRQTPGQLLEAA 681
            VR+PCLGDKFSSMHGQKGVVGFLESQENFPFT  G+VPDIVINPHAFPTRQTPGQLLEAA
Sbjct: 973  VRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDIVINPHAFPTRQTPGQLLEAA 1032

Query: 680  LGKGIACGGKITYATPFTTPSVDVITEQLHSLKFQRWGSERVLNGRTGEIMRSMIFIGPT 501
            LGKGIAC G + YATPFTT SVDVI EQLH   + RWGSE VLNGRTGE ++S++F+GPT
Sbjct: 1033 LGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSENVLNGRTGERVQSLVFMGPT 1092

Query: 500  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHER 321
            FYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AANLHER
Sbjct: 1093 FYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAANLHER 1152

Query: 320  LFTLSDFSQMHICRTCSRPANVIQRALSNG-NVRGPYCGFCKSAENIVRVNVPYGAKLLF 144
            LF LSDFSQMHIC+TC R ANV+ R++  G  +RGPYCGFCKS+ENIVR+NVPYGAKLL+
Sbjct: 1153 LFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVRINVPYGAKLLY 1212

Query: 143  QELFSMGICLKFETEVC 93
            QELFSMGICLKFET+VC
Sbjct: 1213 QELFSMGICLKFETQVC 1229