BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00015007
         (1659 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   114   2e-44
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        113   4e-42
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   110   2e-40
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     110   2e-40
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            111   2e-40
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   108   2e-39
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            108   2e-39
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   107   8e-38
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   101   1e-37
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             114   2e-37
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     110   4e-37
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     111   2e-36
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...   101   2e-36
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     101   2e-35
gb|AFB73911.1| polyprotein [Citrus sinensis]                          100   9e-35
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    89   2e-34
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   127   1e-33
emb|CDP17738.1| unnamed protein product [Coffea canephora]             99   4e-33
gb|AFB73912.1| polyprotein [Citrus sinensis]                           95   8e-33
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         112   9e-32

>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  114 bits (285), Expect(3) = 2e-44
 Identities = 59/145 (40%), Positives = 94/145 (64%), Gaps = 3/145 (2%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   + F+T   V+  +VLMGND  C +  IG I++K HDG   TLSN+  +PDL++N++
Sbjct: 298  CPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLI 357

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEERITNLYKMIGSVIVGEA--STTT*KEDT 1344
             LGTLE+   K+S + G + ++K +I + K  RI +LY + GS++ G A  S++   +D 
Sbjct: 358  SLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDA 417

Query: 1345 TRLWTMCLGHLSERSLQVLHSKGIL 1419
            T+LW M LGH+SE+ + +L  +G+L
Sbjct: 418  TKLWHMRLGHMSEKGMHLLSKQGLL 442



 Score = 67.8 bits (164), Expect(3) = 2e-44
 Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 23/291 (7%)
 Frame = +2

Query: 194 RVTAWLVNEGVYKAFNGKKLS*MDEDE*NDKFMHKDNYHIMPIR*SSLHLYNVMNEMTVG 373
           ++ A L   G+ KA +GK    ++  +     + +     + +  S   L  V NE T  
Sbjct: 24  QMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAA 83

Query: 374 -VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXX 550
            +W KLES+YMTK+L+NK  +K++LY +R+ EG PI  HLN F  I+ D           
Sbjct: 84  ALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDE 143

Query: 551 XXXXXXXXXXXXXXDHLTAIMY--EMETFELKDIQQILQNELMKREDFTKTSELVAKEHK 724
                          H   IM     +T   +D++  L ++  ++ D    SE   +   
Sbjct: 144 DKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSK--EKFDLDIHSEDKGEGLS 201

Query: 725 AKSKSQEP---------QKESGASGGETCFQXXXXXXXXXXXYKEFMKKFG--------- 850
            + ++QE           K  G    +TC                + KKFG         
Sbjct: 202 VRGRTQEKGSTSNKKSRSKSRGRKSNKTC---------------RYCKKFGHDISDCFIL 246

Query: 851 --KNSDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
             K      GK+       E +   + + + S        W+ D+ C++H+
Sbjct: 247 KKKQERQEKGKNPAEAANVETDSDGDVMISVSSDKRSKTEWILDSGCTFHM 297



 Score = 49.3 bits (116), Expect(3) = 2e-44
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = +2

Query: 1475 SFSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFS 1603
            SFST+ H+TK  LD IH D WG S V + G  +Y +T  D+FS
Sbjct: 465  SFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFS 507


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  113 bits (283), Expect(3) = 4e-42
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY  V+G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 311  CPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 370

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGEASTTT---*KE 1338
             L TL+   YK+SG DG + +TK S+ + K   +  NLY + G+ I+G  +T +      
Sbjct: 371  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNS 430

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G   + L +
Sbjct: 431  DATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKF 467



 Score = 65.1 bits (157), Expect(3) = 4e-42
 Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E   G+W KLE I MTK+L++K  +K++L+  ++++   ++ HL+ 
Sbjct: 64  LHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSA 123

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
           FK+IV+D                          +    I+Y  +T  LK++   L   E 
Sbjct: 124 FKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEK 183

Query: 671 MKREDFTKTSELVAK-------------EHKAKSKSQEPQKESGASGG--ETCFQXXXXX 805
           MK+   ++ S   A+              +K++ KS    +    S G  ++C       
Sbjct: 184 MKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 243

Query: 806 XXXXXXYK--EFMKKFGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
                 +K  +  K+ GK    G   ++ +A VV + +     L A +G     D W+ D
Sbjct: 244 HDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILD 303

Query: 977 TECSYHV 997
           T C+YH+
Sbjct: 304 TACTYHM 310



 Score = 44.7 bits (104), Expect(3) = 4e-42
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSFS 1651
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F+
Sbjct: 481  FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFN 538


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  110 bits (274), Expect(3) = 2e-40
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +++G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 346  CPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLI 405

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 406  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 465

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  + +L G     L +
Sbjct: 466  DATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKF 502



 Score = 62.8 bits (151), Expect(3) = 2e-40
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E   G+W KLE I MTK+L++K  +K++L+  ++++   ++ HL+T
Sbjct: 99  LHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLST 158

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
           FK+IV+D                          +    I+Y  +T  LK++   L   E 
Sbjct: 159 FKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYDALHAKEK 218

Query: 671 MKREDFTKTSELVA-------KEHKAKSKSQEPQKESGASGG--------ETCFQXXXXX 805
           MK+   ++ S   A       ++ +  +K+Q   K S +  G        ++C       
Sbjct: 219 MKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 278

Query: 806 XXXXXXYK--EFMKKFGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
                 +K  +  K+ GK    G   ++ +A VV + +     L A +G     D W+ D
Sbjct: 279 HDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILD 338

Query: 977 TECSYHV 997
           T  +YH+
Sbjct: 339 TAWTYHM 345



 Score = 44.7 bits (104), Expect(3) = 2e-40
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F
Sbjct: 516  FNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAF 572


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  110 bits (274), Expect(3) = 2e-40
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +++G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 346  CPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLI 405

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 406  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 465

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  + +L G     L +
Sbjct: 466  DATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKF 502



 Score = 62.8 bits (151), Expect(3) = 2e-40
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E   G+W KLE I MTK+L++K  +K++L+  ++++   ++ HL+T
Sbjct: 99  LHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLST 158

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
           FK+IV+D                          +    I+Y  +T  LK++   L   E 
Sbjct: 159 FKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYDALHAKEK 218

Query: 671 MKREDFTKTSELVA-------KEHKAKSKSQEPQKESGASGG--------ETCFQXXXXX 805
           MK+   ++ S   A       ++ +  +K+Q   K S +  G        ++C       
Sbjct: 219 MKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 278

Query: 806 XXXXXXYK--EFMKKFGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
                 +K  +  K+ GK    G   ++ +A VV + +     L A +G     D W+ D
Sbjct: 279 HDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILD 338

Query: 977 TECSYHV 997
           T  +YH+
Sbjct: 339 TAWTYHM 345



 Score = 44.7 bits (104), Expect(3) = 2e-40
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F
Sbjct: 516  FNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAF 572


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  111 bits (277), Expect(3) = 2e-40
 Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 277  CPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 336

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
               TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 337  SFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 396

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 397  DATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKF 433



 Score = 62.0 bits (149), Expect(3) = 2e-40
 Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 5/251 (1%)
 Frame = +2

Query: 260 MDEDE*NDKFMHKDNYHIMPIR*SSLHLYNVMNEMT-VGVWCKLESIYMTKNLSNKFFMK 436
           +DE + + K M   + H+     S+  L  V+ E T VG+W KL+ I MTK+L++K  +K
Sbjct: 49  VDEKKKDHKVMSYIHLHL-----SNNILQEVLKEETAVGLWLKLKQICMTKDLTSKMHLK 103

Query: 437 KQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHLT-AIM 613
           ++L+  ++++   ++ HL+ FK+IV+D                          +    I+
Sbjct: 104 QKLFLHKLQDDESVMDHLSAFKEIVADLESMEVKHDEEDLGLILLCSLPSSYANFRDTIL 163

Query: 614 YEMETFELKDIQQILQ-NELMKREDFTKTSELVAKEHKAKSKSQEPQKESGASGGETCFQ 790
           Y  +T  LK++   L   E MK+                 S+    Q ES   G      
Sbjct: 164 YSRDTLTLKEVYDALHAKEKMKK--------------MVPSEGSNSQAESLVVG----VG 205

Query: 791 XXXXXXXXXXXYKEFMKKFGKNSDGASGKDDQ--AGVVEELEDPYNSLTAESGRGVYLDT 964
                       K  +   G  S  A  K+++  A VV + +     L A  G     D 
Sbjct: 206 NRRRTQTTNQEIKAQVATVGDQSPEAGKKEEEGKAAVVTDEKSDAELLVAYVGCAQTSDQ 265

Query: 965 WLFDTECSYHV 997
           W+ DT C+YH+
Sbjct: 266 WILDTACTYHM 276



 Score = 44.3 bits (103), Expect(3) = 2e-40
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F
Sbjct: 447  FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAF 503


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  108 bits (271), Expect(3) = 2e-39
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+   VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 518  CPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 577

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 578  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 637

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH++E  L  L  +G+L G     L +
Sbjct: 638  DATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKF 674



 Score = 62.8 bits (151), Expect(3) = 2e-39
 Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335  LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
            LHL N      +  E+  G+W KLE I MTK+L++K  +K+ L+  ++++   ++ HL+ 
Sbjct: 271  LHLSNNILQEVLKEEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSA 330

Query: 497  FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
            FK+I++D                          +    I+Y  +T  LK++   L   E 
Sbjct: 331  FKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEK 390

Query: 671  MKREDFTKTSELVA-------KEHKAKSKSQEPQKESGASGG--------ETCFQXXXXX 805
            MK+   ++ S   A       ++ +  +K+Q   K S +  G        ++C       
Sbjct: 391  MKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 450

Query: 806  XXXXXXYK--EFMKKFGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
                  +K  +  K+ GK    G   ++ +A VV + +     L A +G     D W+ +
Sbjct: 451  HDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILN 510

Query: 977  TECSYHV 997
            T C YH+
Sbjct: 511  TACIYHM 517



 Score = 42.7 bits (99), Expect(3) = 2e-39
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G  +Y +T  D++S      FL+ +  +F
Sbjct: 688  FNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAF 744


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  108 bits (271), Expect(3) = 2e-39
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+   VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 311  CPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 370

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 371  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 430

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH++E  L  L  +G+L G     L +
Sbjct: 431  DATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKF 467



 Score = 62.8 bits (151), Expect(3) = 2e-39
 Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E+  G+W KLE I MTK+L++K  +K+ L+  ++++   ++ HL+ 
Sbjct: 64  LHLSNNILQEVLKEEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSA 123

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
           FK+I++D                          +    I+Y  +T  LK++   L   E 
Sbjct: 124 FKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEK 183

Query: 671 MKREDFTKTSELVA-------KEHKAKSKSQEPQKESGASGG--------ETCFQXXXXX 805
           MK+   ++ S   A       ++ +  +K+Q   K S +  G        ++C       
Sbjct: 184 MKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 243

Query: 806 XXXXXXYK--EFMKKFGKN-SDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
                 +K  +  K+ GK    G   ++ +A VV + +     L A +G     D W+ +
Sbjct: 244 HDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILN 303

Query: 977 TECSYHV 997
           T C YH+
Sbjct: 304 TACIYHM 310



 Score = 42.7 bits (99), Expect(3) = 2e-39
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G  +Y +T  D++S      FL+ +  +F
Sbjct: 481  FNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAF 537


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  107 bits (266), Expect(3) = 8e-38
 Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 4/156 (2%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGND-VC*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C + EWF+TY  V+G  + M N  VC +V  G+I+++ HDG   TL+ + HVP + KN++
Sbjct: 290  CPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLI 349

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEERITNLYKMIGSVIVGE---ASTTT*KED 1341
             L  L++  + +SGKDG + + K S  I K      LY + GS + G    AS+   ++D
Sbjct: 350  SLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKD 409

Query: 1342 TTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
             T+LW + LGH+ ER +Q+L  + +L G K  +L +
Sbjct: 410  MTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEF 445



 Score = 60.8 bits (146), Expect(3) = 8e-38
 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 8/221 (3%)
 Frame = +2

Query: 359 EMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXX 538
           E   G+W KLES+YMTK+L+NK  +K++L+GLR+ EG  + +HL     ++ +       
Sbjct: 76  ETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTLLLELRNIDVK 135

Query: 539 XXXXXXXXXXXXXXXXXXDH-LTAIMYEMETFELKDIQQILQN-ELMKREDFTKT----S 700
                             ++ + + +   +T  L++++  L + EL  + + T T    S
Sbjct: 136 IEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPS 195

Query: 701 ELVAKEHKAKSKSQEPQK--ESGASGGETCFQXXXXXXXXXXXYKEFMKKFGKNSDGASG 874
            L     K +    +  K    GA   + C              K+  K+  K S  A+ 
Sbjct: 196 GLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKK-KKQSEKQSVSAAV 254

Query: 875 KDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
            ++     E++    +  T  S      D W+ D+  SYH+
Sbjct: 255 AEEDTNSEEDIALVADEHTHHS------DVWVLDSGASYHI 289



 Score = 40.8 bits (94), Expect(3) = 8e-38
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFS 1603
            F  + H+TK  LD IH D WG   V ++G  +++V+  D++S
Sbjct: 459  FPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYS 500


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  101 bits (252), Expect(3) = 1e-37
 Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 6/157 (3%)
 Frame = +1

Query: 997  VQGEWFSTYTSVE-GDLVLMGND-VC*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            +  +WFS+Y SV+ GD+V MGND    +V IG++++K HDG   TL ++ H+P + +N++
Sbjct: 304  INRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLI 363

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSIT-IFKEERITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+A  YK+SG  G V ++K S+  +  +    NLY + GS + G    A+ T  + 
Sbjct: 364  SLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEP 423

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            + T LW M LGH+SE  +  L  + +L G    N+ +
Sbjct: 424  NKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKF 460



 Score = 60.1 bits (144), Expect(3) = 1e-37
 Identities = 63/246 (25%), Positives = 99/246 (40%), Gaps = 25/246 (10%)
 Frame = +2

Query: 335 LHLYN-----VMNEMTVG-VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N     V+ E T   +W KLESI M+K+L++K  +K +L+  +++E   +L H++ 
Sbjct: 66  LHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNHISV 125

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQN-EL 670
           FK+IV+D                         ++    I+   +   L ++ + LQN E 
Sbjct: 126 FKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYENFRDTILLSRDELTLAEVYEALQNREK 185

Query: 671 MK-----REDFTKTSELVAK-----------EHKAKSKSQEPQKESGASGGETCFQXXXX 802
           MK         +K   L  K             + KSKS+   K  G    + C +    
Sbjct: 186 MKGMVQSDASSSKGEALQVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKFCKYCKKKIHF 245

Query: 803 XXXXXXXY-KEFMKKFGKNSDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDT 979
                    KE  K  GK S   S K+  +G         + L   +G     D W+ DT
Sbjct: 246 IKECWKLQNKEKRKSDGKASVVTSAKNSDSG---------DCLVVFAGCVASHDEWILDT 296

Query: 980 ECSYHV 997
            CS+H+
Sbjct: 297 ACSFHI 302



 Score = 46.6 bits (109), Expect(3) = 1e-37
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLE 1630
            F+TS H+TK  LD +H D WG S   ++G A+Y +T  D++S      FL+
Sbjct: 474  FNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLK 524


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  114 bits (284), Expect(3) = 2e-37
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY  V+G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 296  CPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLI 355

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGEASTTT---*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G  +T +      
Sbjct: 356  SLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNS 415

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 416  DATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKF 452



 Score = 50.4 bits (119), Expect(3) = 2e-37
 Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 23/291 (7%)
 Frame = +2

Query: 194 RVTAWLVNEGVYKAFNG--KKLS*MDEDE*NDKFMHKDNYHIMPIR*SSLHLYNVMNEMT 367
           ++ A L  + +  AF+G  K+      DE   K M +     + +  S+  L  V+ E T
Sbjct: 23  KMRAVLAQQDLDDAFSGFDKRTQDWSNDE---KKMDRKAMSYIHLHLSNNILQEVLKEET 79

Query: 368 V-GVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXX 544
             G+W KLE I MTK+L+N              +G  ++ HL+ FK+IV+D         
Sbjct: 80  AAGLWLKLEQICMTKDLTN--------------DG-SVMDHLSVFKEIVADLESMEVKYD 124

Query: 545 XXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NELMKREDFTKTSELVAK- 715
                            +    I+Y  +T  LK++   L   E MK+   ++ S   A+ 
Sbjct: 125 EEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEG 184

Query: 716 ------------EHKAKSKSQEPQKESGASGG--ETCFQXXXXXXXXXXXYK--EFMKKF 847
                        +K++ KS    +    S G  ++C             +K  +  K+ 
Sbjct: 185 LVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRT 244

Query: 848 GKNSDGASGKDD-QAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
           GK       +D+ +A VV + +     L A +G     D W+ DT C+YH+
Sbjct: 245 GKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 295



 Score = 42.7 bits (99), Expect(3) = 2e-37
 Identities = 19/58 (32%), Positives = 33/58 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSFS 1651
            F+TS H T+  LD +H D WG +   + G A+Y +T  +++S      FL+ +  +F+
Sbjct: 466  FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFN 523


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  110 bits (276), Expect(3) = 4e-37
 Identities = 59/157 (37%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C+  +WF+TY +V+G  VLMG+D  C +  +  +++KM DG   TLS++ H+P+L+++++
Sbjct: 311  CLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLI 370

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 371  SLCTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTILGNIAAVSDSLYNS 430

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 431  DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKF 467



 Score = 65.9 bits (159), Expect(3) = 4e-37
 Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E   G+W KLE I MTK+L++K  +K++L+  ++++   ++ HL+ 
Sbjct: 64  LHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSA 123

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ---- 661
           FKKIV+D                          +    I+Y  +T  LK++   L     
Sbjct: 124 FKKIVADLESMEVKYDEEDLCLILLCSLPSSYANFRDTILYSCDTLTLKEVYDALHAKEK 183

Query: 662 -NELMKREDFTKTSE-LVAK----EHKAKSKSQEPQKES--GASGGETCFQXXXXXXXXX 817
             +++  E     +E LV +    E    SKS++    S  G S     ++         
Sbjct: 184 IKKMVPSEGSNSQAEGLVVRGRQQEKNTNSKSRDKSSSSYRGRSKSRGRYKSCKYYKRDG 243

Query: 818 XXYKEFMKKFGKNS-------DGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
               E  K   K+         G   ++ +A VV + +     L A +G     D W+ D
Sbjct: 244 HDISECWKLQDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILD 303

Query: 977 TECSYHV 997
           T C+YH+
Sbjct: 304 TACTYHM 310



 Score = 29.6 bits (65), Expect(3) = 4e-37
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWG 1540
            F+TS H T+  LD +H D WG
Sbjct: 481  FNTSTHTTESILDYVHSDLWG 501


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  111 bits (278), Expect(3) = 2e-36
 Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+G  VLMG+D  C +  IG +++KM DG   TL ++ H+P+L+++++
Sbjct: 220  CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLI 279

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 280  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNS 339

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 340  DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKF 376



 Score = 47.8 bits (112), Expect(3) = 2e-36
 Identities = 43/219 (19%), Positives = 86/219 (39%), Gaps = 20/219 (9%)
 Frame = +2

Query: 401 MTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXXXXXXXXXXX 580
           MTK+L++K  +K++L+  ++++   ++ HL+ FK+IV+D                     
Sbjct: 1   MTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSL 60

Query: 581 XXXXDHLT-AIMYEMETFELKDIQQILQ-NELMKREDFTKTSELVAKEHKAKSKSQEPQK 754
                +    I+Y  +T  LK++   L   E MK+   ++ S   A+    + + QE   
Sbjct: 61  PSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNT 120

Query: 755 ESGASGGETCFQXXXXXXXXXXXYKEFMKKFGKNSD------------------GASGKD 880
            + +    +                ++ K+ G +                    G   ++
Sbjct: 121 NNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEE 180

Query: 881 DQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
            +A VV + +     L A +G     D W+ DT C+YH+
Sbjct: 181 GKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 219



 Score = 44.3 bits (103), Expect(3) = 2e-36
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F
Sbjct: 390  FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAF 446


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1131

 Score =  101 bits (251), Expect(3) = 2e-36
 Identities = 56/158 (35%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVE-GDLVLMGND-VC*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNV 1167
            C+  +WFS+Y SV+ GD+V MG+D    +V IG++++K HDG   TL ++ ++P + +N+
Sbjct: 253  CINRDWFSSYKSVQNGDVVRMGDDNPHEIVGIGSVQIKTHDGMTRTLKDVRYIPGMARNL 312

Query: 1168 LLLGTLEA*KYKFSGKDGGVTITKDSIT-IFKEERITNLYKMIGSVIVGEASTTT*KED- 1341
            + L TL+A  YK+SG  G V ++K S+  +  +    NLY + GS + G  +     +D 
Sbjct: 313  ISLSTLDAEGYKYSGLGGVVKVSKGSLVYMISDMNSANLYVLRGSTLHGSVTAAAVSKDE 372

Query: 1342 --TTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
               T LW M LGH+SE  +  L  + +L G    N+ +
Sbjct: 373  PSKTNLWHMRLGHMSELGMAELMKRNLLDGYTQGNMKF 410



 Score = 55.5 bits (132), Expect(3) = 2e-36
 Identities = 66/291 (22%), Positives = 115/291 (39%), Gaps = 13/291 (4%)
 Frame = +2

Query: 164 KVQLSIVEY-TRVTAWLVN-----------EGVYKAFNGKKLS*MDEDE*NDKFMHKDNY 307
           K  L +++Y TR + W V            +   ++F  KK +    +E   K   +   
Sbjct: 5   KYDLPLLDYKTRFSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTAEE---KQKDRKAL 61

Query: 308 HIMPIR*SSLHLYNVMNEMTVG-VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQ 484
            ++ +  S+  L  V+ E T   +W KLESI M+K+L++K  +K +L+  +++E   +L 
Sbjct: 62  SLIQLLLSNDILQEVLQEKTAEELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLN 121

Query: 485 HLNTFKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHLTAIMYEMETFELKDIQQILQN 664
           H++ FK+IV+D                           L ++      F           
Sbjct: 122 HISVFKEIVADLVSMEVQFDDEDLGLLL----------LCSLPSSYANFR--------DT 163

Query: 665 ELMKREDFTKTSELVAKEHKAKSKSQEPQKESGASGGETCFQXXXXXXXXXXXYKEFMKK 844
            L+ R++ T      A +++ K K    Q +  +S GE                KE  K 
Sbjct: 164 ILLSRDELTLAEVYEALQNREKMKGMV-QSDPSSSKGEALQN------------KEKRKS 210

Query: 845 FGKNSDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
            GK S   S ++  +G         + L   +G     D W+ DT CS+H+
Sbjct: 211 DGKASVVTSAENSDSG---------DCLVVFAGCVASHDEWILDTACSFHI 252



 Score = 47.0 bits (110), Expect(3) = 2e-36
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLE 1630
            F+TS H+TK  LD +H D WG S   ++G A+Y +T  D++S      FL+
Sbjct: 424  FNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSTKVWPYFLK 474


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  101 bits (252), Expect(3) = 2e-35
 Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
 Frame = +1

Query: 991  SCVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNV 1167
            +C   +WF TY       VLMGND    ++ IG ++++MHDG    L N+ H P L +N+
Sbjct: 273  TCAHRDWFDTYKEGNTRSVLMGNDSPSRIMGIGMVKIRMHDGIVRALGNVRHTPGLNRNL 332

Query: 1168 LLLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGEASTTT*KEDT 1344
            + L T++   +   G++G + + K  +   K   +  N+YK+ GS + G A   T +ED 
Sbjct: 333  ISLSTMDRVGFWHKGQNGVLKVGKGQMVYMKGAIQPDNMYKLTGSTVEGGAGVCT-EEDK 391

Query: 1345 TRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTYLNF 1458
            T LW   LGH+S+R LQ LH K  L G+ +A L +  +
Sbjct: 392  TELWRRRLGHMSQRGLQELHKKEQLDGVMSAALEFCRY 429



 Score = 49.7 bits (117), Expect(3) = 2e-35
 Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 13/219 (5%)
 Frame = +2

Query: 377 WCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXXX 556
           W  LES+Y  K++ NK  +K+QL+GL+++EG  +  H+  F+  +++             
Sbjct: 59  WENLESVYKGKSIGNKLLLKEQLFGLKMEEGDDLNDHICKFQNCIANLEKVGAKMDDEDT 118

Query: 557 XXXXXXXXXXXXDHLTAIMYEMETFELKDIQQILQN--ELMKREDFTKTSEL-VAKEHKA 727
                        H    M   E   L  + +  ++   L + ED ++   L V  + + 
Sbjct: 119 AVMLLHSLPPLFKHFKTTMIFKELITLSKVCENPKSYIRLEREEDSSQARGLYVRGKERG 178

Query: 728 KSKSQ---------EPQKESGASGGETCFQXXXXXXXXXXXYKEFMKKFGKNSDGASGKD 880
           +S+++            K  G    + CF            +K   K++ +     SG+ 
Sbjct: 179 RSRNRGGGFQGRGMSKSKGKGKGKKDGCF-----IYGSPDHWKRNCKQWKEKKAQMSGES 233

Query: 881 DQ-AGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYH 994
            Q A VV    D    L A S        W  DT C++H
Sbjct: 234 SQLANVVIGYNDEDGELLAISTSSGAPRHWTLDTACTFH 272



 Score = 49.7 bits (117), Expect(3) = 2e-35
 Identities = 22/55 (40%), Positives = 36/55 (65%)
 Frame = +2

Query: 1472 YSFSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETE 1636
            ++ S+S++K+K  LD IH D WG S   + G A+Y+V+F D+FS      F++T+
Sbjct: 440  FNLSSSENKSKGVLDYIHTDVWGPSATISKGGARYFVSFIDDFSRKVWIFFMKTK 494


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  100 bits (250), Expect(3) = 9e-35
 Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1006 EWFSTYTSVEGDLVLMGNDVC*LVA-IGNIRMKMHDGQE*TLSNIGHVPDLRKNVLLLGT 1182
            EWF TY  + G  V MGND    +A IG I++KM DG   T+  + HV  L+KN+L LG 
Sbjct: 307  EWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSLGQ 366

Query: 1183 LEA*KYKFSGKDGGVTITKDSITIFKEERI-TNLYKMIGSVIV-GEASTTT*KEDTTRLW 1356
            +++  YK   ++G + I K ++ + K E+I  NL+ + G  +   +A   +  E++T +W
Sbjct: 367  MDSHGYKTHVENGIMKIVKGALVLMKVEKIGANLFMLKGETLQEADACVASNGEESTMMW 426

Query: 1357 TMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
             + LGH+SE+ L++L  + +LPG+K+ +L +
Sbjct: 427  HLKLGHMSEQGLKILSERKLLPGLKSVSLPF 457



 Score = 58.2 bits (139), Expect(3) = 9e-35
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 17/235 (7%)
 Frame = +2

Query: 374  VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXX 553
            +W  L  +Y  K+L NK F+K++LY LR+ E   +  H+NT K + S             
Sbjct: 79   IWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHNIEENE 138

Query: 554  XXXXXXXXXXXXXDHLTAIMYE---METFELKDIQQILQNELMKREDFTKTSELVAKEHK 724
                         D L   +     +E+    D+   + NE  +R++  +  +  +++ +
Sbjct: 139  RAELLLQSLPDSYDQLIINLTNNNPVESLVFDDVAASVLNEESRRKN-KENRQASSQQAE 197

Query: 725  AKSKSQEPQKESGASGGET-------------CFQXXXXXXXXXXXYKEFMKKFGKNSDG 865
            A S ++    E G SG +              C+            +    ++ GK  + 
Sbjct: 198  ALSVTRGRSTERGPSGSQNQGRSKFRGKKNVKCYNCGKKGHVKKECWSNQKRREGKEPET 257

Query: 866  ASGKDDQAGVVEELEDPYNSLTAES-GRGVYLDTWLFDTECSYHVSKESGSVHIH 1027
            ++ +   A   ++ E  Y+  T  S GR    D WL D+  ++H++      H +
Sbjct: 258  SNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTY 312



 Score = 39.3 bits (90), Expect(3) = 9e-35
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFS 1603
            FS S  ++K  LDLIH D W S  + ++G AKY VTF D++S
Sbjct: 471  FSRSIARSKCILDLIHSDVWESPDI-SMGGAKYMVTFIDDYS 511


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score = 88.6 bits (218), Expect(3) = 2e-34
 Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+G  VLMG+D  C +  IG +++KM DG   TLS++ H P+L+++++
Sbjct: 253  CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLI 312

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEERITNLYKMIGSVIVGEASTTT*KEDTTR 1350
             L TL+   YK+SG DG + +                  ++G+V V   S +    D T 
Sbjct: 313  SLRTLDRKGYKYSGGDGILKL------------------ILGNVAV--VSDSLSNSDATN 352

Query: 1351 LWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 353  LWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKF 385



 Score = 66.2 bits (160), Expect(3) = 2e-34
 Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
 Frame = +2

Query: 335 LHLYN------VMNEMTVGVWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNT 496
           LHL N      +  E   G+W KLE I MTK+L++K  +K++L+  ++++   ++ HL+ 
Sbjct: 6   LHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSA 65

Query: 497 FKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQ-NEL 670
           FK+IV+D                          +    I+Y  +T  LK++   L   E 
Sbjct: 66  FKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHTKEK 125

Query: 671 MKREDFTKTSELVA-------KEHKAKSKSQEPQKES----GASGGETCFQXXXXXXXXX 817
           MK+   ++ S   A       ++ K  +K+Q   K S    G S     ++         
Sbjct: 126 MKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDG 185

Query: 818 XXYKEFMKKFGKNS-------DGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFD 976
               E  K   K+         G   ++ +A +V + +     L A +G     D W+ D
Sbjct: 186 HDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILD 245

Query: 977 TECSYHV 997
           T C+YH+
Sbjct: 246 TACTYHM 252



 Score = 42.4 bits (98), Expect(3) = 2e-34
 Identities = 20/57 (35%), Positives = 31/57 (54%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A Y +T  D++S      FL+ +  +F
Sbjct: 399  FNTSTHTTEGTLDYVHSDLWGPARKTSFGGACYMMTIVDDYSRKVWPYFLKHKYQAF 455


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 365

 Score =  127 bits (318), Expect(2) = 1e-33
 Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WFSTY+  +G  V+MGN+  C  V IG I++KM DG   TL+ + HVPDLRK ++
Sbjct: 180  CPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGLI 239

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEERITNLYKMIGSVIVGE-ASTTT*KEDTT 1347
             LGTL+A    F G DG + + K +  + K E+I +LY++IG  I G+ A T++  +D T
Sbjct: 240  SLGTLDASGCTFIGSDGIIKVKKGAPVVMKGEKIESLYRLIGKTITGDIAVTSSTDDDDT 299

Query: 1348 RLWTMCLGHLSERSLQVLHSKGILPGIKTANLTYLNF 1458
             LW   LGH+SER L  LH++ +L GIK+  + +  F
Sbjct: 300  MLWHARLGHMSERGLLELHNRKLLKGIKSCKIDFCEF 336



 Score = 47.4 bits (111), Expect(2) = 1e-33
 Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
 Frame = +2

Query: 458 IKEGMPILQHLNTFKKIVSDXXXXXXXXXXXXXXXXXXXXXXXXXDHL-TAIMYEMETFE 634
           + EG  +L+H+N F K++S                          DHL T I+Y  +T +
Sbjct: 1   MSEGANLLEHMNVFSKMISQLRSINVKLEEENEALLLLSSLPKSYDHLVTTILYGKDTLK 60

Query: 635 LKDIQQ-ILQNELMKREDFTKTSELVAKEHKAKSKSQEPQKESGASGGETCFQXXXXXXX 811
           ++++   +L NE+  ++   ++  +   + + +SK++   +    S  +           
Sbjct: 61  VEEVNATLLSNEVRNKQSTGESLTVKTSQDRGRSKNKFGNQYRYRSISKENDNRCYYCKK 120

Query: 812 XXXXYKEFMKKFGKNSDGASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSY 991
                ++  KK  +     SG  ++A V   LE    +L   S      D+W+ D++CSY
Sbjct: 121 EGHWKRDCPKKSKQQQQKKSG--EEASVASRLEKDSETLCTFSCMDSS-DSWILDSDCSY 177

Query: 992 HV 997
           H+
Sbjct: 178 HM 179


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 99.0 bits (245), Expect(3) = 4e-33
 Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
 Frame = +1

Query: 1006 EWFSTYTSVEGDLVLMGND-VC*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVLLLGT 1182
            EWF  +  ++G  V MGND  C  V IG+I+++ HDG    L ++ +VP+L+++++ LG 
Sbjct: 324  EWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGL 383

Query: 1183 LEA*KYKFSGKDGGVTITKDSITIFKEERITNLYKMIGSVIVGEASTTT*KE-----DTT 1347
            LE+   +   +DG + +T  ++ + K  R  NLY   GS +VG A+  T        + T
Sbjct: 384  LESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEAT 443

Query: 1348 RLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            +LW M LG   E+SLQ L  +G+L G K   L +
Sbjct: 444  KLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEF 477



 Score = 48.1 bits (113), Expect(3) = 4e-33
 Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 2/211 (0%)
 Frame = +2

Query: 374  VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXX 553
            +W  LE  ++ K+  NK  MKK L+    + G  + +H+  F ++V+D            
Sbjct: 111  LWKALEGKFLKKSGQNKLLMKKILFRFDYQPGTTMNEHITIFNQLVADLLNLDVNFEDED 170

Query: 554  XXXXXXXXXXXXXDHL-TAIMYEMETFELKDIQQILQNELMKREDFTKTSELVAKEHKAK 730
                         +HL T +++  E   L  +   L +  ++++D  K  ++ A +    
Sbjct: 171  LALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSALYSRELRKQD-KKKKKVAAADEALV 229

Query: 731  SKSQEPQKESGASGGETCFQXXXXXXXXXXXYKEFMKKFGKNSDGASGKDDQAGVVEELE 910
            ++ ++  +  G  G                  K   KK                V E   
Sbjct: 230  ARGRQQSQSKGRRGWSKSISRVAKDECAFCREKGHWKKDCPKLKKKGKAPQDVNVAECKS 289

Query: 911  DPYNSLT-AESGRGVYLDTWLFDTECSYHVS 1000
            D  +  + A S    + D W+ D+ C+YH++
Sbjct: 290  DAESDFSLAVSRLTSHPDEWILDSTCTYHMT 320



 Score = 45.8 bits (107), Expect(3) = 4e-33
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFS 1603
            F T  H TK  LD +H D WG +   ++G   Y+VTF D+FS
Sbjct: 491  FGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFS 532


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 95.1 bits (235), Expect(3) = 8e-33
 Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1006 EWFSTYTSVEGDLVLMGNDVC*LVA-IGNIRMKMHDGQE*TLSNIGHVPDLRKNVLLLGT 1182
            EWF TY  + G  V MGND    +A IG I++KM DG   T+  + HV  L+KN+L LG 
Sbjct: 307  EWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQ 366

Query: 1183 LEA*KYKFSGKDGGVTITKDSITIFKEERI-TNLYKMIGSVIV-GEASTTT*KEDTTRLW 1356
            +++   K   ++G + I K ++ + K E+I  NL+ + G  +   +A   +  E++T +W
Sbjct: 367  MDSHGCKTHVENGIMKIVKGALVLMKAEKICANLFMLKGETLQEADACVASNGEESTMMW 426

Query: 1357 TMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
             + LGH+SE+ L++L  + + PG+K+ +L +
Sbjct: 427  HLKLGHMSEQGLKILSERKLPPGLKSVSLPF 457



 Score = 57.4 bits (137), Expect(3) = 8e-33
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 17/235 (7%)
 Frame = +2

Query: 374  VWCKLESIYMTKNLSNKFFMKKQLYGLRIKEGMPILQHLNTFKKIVSDXXXXXXXXXXXX 553
            +W  L  +Y  K+L NK F+K++LY LR+ E   +  H+NT K + S             
Sbjct: 79   IWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINTLKTLFSQLTTLGHNIEENE 138

Query: 554  XXXXXXXXXXXXXDHLTAIMYE---METFELKDIQQILQNELMKREDFTKTSELVAKEHK 724
                         D L   +     +++    D+   + NE  +R++  +  +  +++ +
Sbjct: 139  RAELLLQSLPDSYDQLIINLTNNNPVDSLVFDDVAASVLNEESRRKN-KENRQASSQQAE 197

Query: 725  AKSKSQEPQKESGASGGET-------------CFQXXXXXXXXXXXYKEFMKKFGKNSDG 865
            A S ++    E G SG +              C+            +    ++ GK  + 
Sbjct: 198  ALSVTRGRSTERGPSGSQNHGRSKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKEPES 257

Query: 866  ASGKDDQAGVVEELEDPYNSLTAES-GRGVYLDTWLFDTECSYHVSKESGSVHIH 1027
            ++ +   A   ++ E  Y+  T  S GR    D WL D+  ++H++      H +
Sbjct: 258  SNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTY 312



 Score = 39.3 bits (90), Expect(3) = 8e-33
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFS 1603
            FS S  ++K  LDLIH D W S  + ++G AKY VTF D++S
Sbjct: 471  FSRSIARSKCILDLIHSDVWESPDI-SMGGAKYMVTFIDDYS 511


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  112 bits (280), Expect(3) = 9e-32
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +1

Query: 994  CVQGEWFSTYTSVEGDLVLMGNDV-C*LVAIGNIRMKMHDGQE*TLSNIGHVPDLRKNVL 1170
            C   +WF+TY +V+G  VLMG+D  C +  IG +++KM DG   TLS++ H+P+L+++++
Sbjct: 143  CPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLI 202

Query: 1171 LLGTLEA*KYKFSGKDGGVTITKDSITIFKEE-RITNLYKMIGSVIVGE---ASTTT*KE 1338
             L TL+   YK+SG DG + +TK S+ + K + +  NLY + G+ I+G     S +    
Sbjct: 203  SLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNS 262

Query: 1339 DTTRLWTMCLGHLSERSLQVLHSKGILPGIKTANLTY 1449
            D T LW M LGH+SE  L  L  +G+L G     L +
Sbjct: 263  DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKF 299



 Score = 44.3 bits (103), Expect(3) = 9e-32
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 1478 FSTSQHKTKD*LDLIHMDAWGSSLVATIGNAKYYVTFTDNFSLDSVDLFLETELVSF 1648
            F+TS H T+  LD +H D WG +   + G A+Y +T  D++S      FL+ +  +F
Sbjct: 313  FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAF 369



 Score = 31.6 bits (70), Expect(3) = 9e-32
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 863 GASGKDDQAGVVEELEDPYNSLTAESGRGVYLDTWLFDTECSYHV 997
           G   ++ +A VV + +     L A +G     D W+ DT C+YH+
Sbjct: 98  GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHM 142