BLASTX nr result

ID: Ophiopogon26_contig00014925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00014925
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242184.1| transcription initiation factor TFIID subuni...    63   1e-09

>ref|XP_020242184.1| transcription initiation factor TFIID subunit 2-like [Asparagus
           officinalis]
          Length = 196

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -1

Query: 363 SSIKDPQILRLQALGCSLPQPLQNSCSQSKIESLDLAVGSNEAIKY-GSSCYMKPLAPVQ 187
           SS+ DP+ILR      S PQP+ NSC QSK+E LDLAVG++  I Y GSS YM+ LAPV+
Sbjct: 138 SSLTDPRILR-----SSRPQPMLNSCGQSKVEPLDLAVGNHAGIMYGGSSRYMELLAPVK 192

Query: 186 L 184
           L
Sbjct: 193 L 193


Top