BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00014085
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248934.1| nuclear pore complex protein NUP50A-like [As...    75   5e-13
ref|XP_020269578.1| nuclear pore complex protein NUP50B-like [As...    74   1e-12

>ref|XP_020248934.1| nuclear pore complex protein NUP50A-like [Asparagus officinalis]
 ref|XP_020248943.1| nuclear pore complex protein NUP50A-like [Asparagus officinalis]
 ref|XP_020248950.1| nuclear pore complex protein NUP50A-like [Asparagus officinalis]
 gb|ONK80652.1| uncharacterized protein A4U43_C01F20210 [Asparagus officinalis]
          Length = 458

 Score = 74.7 bits (182), Expect = 5e-13
 Identities = 53/119 (44%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
 Frame = +3

Query: 3   RRIVKVRRAQTAAAGSNPFAALRMVXXXXXXXXXXXXXXXPDTTGDKTEVKDGAXXXXXX 182
           RRIVKVRR+Q A A SNPFA+L MV                 + GD+   KDGA      
Sbjct: 48  RRIVKVRRSQPAVASSNPFASLGMVPPSDSIANATTN----TSNGDEVGAKDGADENKET 103

Query: 183 XXXXXXXXTGSLVDESNGIKESDEKVELKPDASFGKDASKVEGDAVVETT-----EKDV 344
                   +GS ++ESNG ++S++KVE K      KDASKVEGDAV E T     EKDV
Sbjct: 104 PVEGKGEESGSSINESNG-EDSNKKVEEKTCFPSAKDASKVEGDAVEEETPVIEAEKDV 161


>ref|XP_020269578.1| nuclear pore complex protein NUP50B-like [Asparagus officinalis]
 ref|XP_020269579.1| nuclear pore complex protein NUP50B-like [Asparagus officinalis]
 ref|XP_020269580.1| nuclear pore complex protein NUP50B-like [Asparagus officinalis]
 gb|ONK66753.1| uncharacterized protein A4U43_C06F11590 [Asparagus officinalis]
          Length = 426

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 45/111 (40%), Positives = 57/111 (51%)
 Frame = +3

Query: 3   RRIVKVRRAQTAAAGSNPFAALRMVXXXXXXXXXXXXXXXPDTTGDKTEVKDGAXXXXXX 182
           R+IVKVRR+Q A A SNPFAALR+V               P+   DKTEVKDGA      
Sbjct: 48  RKIVKVRRSQPAPASSNPFAALRLVPPSDAITNAADATAKPEIASDKTEVKDGADEQQGK 107

Query: 183 XXXXXXXXTGSLVDESNGIKESDEKVELKPDASFGKDASKVEGDAVVETTE 335
                     + VDES G +++D++VE K D S  K  S V+ +  V   E
Sbjct: 108 SEESTGTEIRTSVDESKGTEDNDKRVEEKTDTSSVKVDSNVDSEKDVRNGE 158