BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00014082
         (617 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019085447.1| PREDICTED: uncharacterized protein LOC109126...   258   3e-83
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]   264   3e-78
gb|AQY61302.1| Pol [Vitis vinifera]                                   259   1e-76
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...   253   4e-76
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]   251   5e-76
gb|KYP77193.1| Retrovirus-related Pol polyprotein from transposo...   247   1e-75
gb|PRQ50148.1| putative RNA-directed DNA polymerase [Rosa chinen...   231   2e-74
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]   243   3e-74
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304...   241   8e-74
gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposo...   247   1e-73
gb|AQY61300.1| Pol [Coffea eugenioides]                               251   1e-73
gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposo...   246   2e-73
gb|AQY61299.1| Pol [Coffea canephora]                                 247   2e-72
gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinen...   242   6e-72
gb|AQY61295.1| Pol [Coffea arabica]                                   246   7e-72
gb|PRQ53193.1| putative RNA-directed DNA polymerase [Rosa chinen...   243   2e-71
gb|AQY61297.1| Pol [Coffea canephora]                                 240   3e-70
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha...   240   5e-70
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]   240   5e-70
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]      240   9e-70

>ref|XP_019085447.1| PREDICTED: uncharacterized protein LOC109126386 [Camelina sativa]
          Length = 289

 Score =  258 bits (658), Expect = 3e-83
 Identities = 129/195 (66%), Positives = 152/195 (77%)
 Frame = +1

Query: 4   DKHDDPNMEECVPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDE 183
           +KHD P M E + E    KTN ++   +   E +EN EISI+Y+++G +WNR +M+D+  
Sbjct: 102 EKHDAPKMTENIME----KTNHDSSTNIEHHESEENHEISINYIHSGKIWNRKKMDDV-- 155

Query: 184 KFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEA 363
            FSY V+ +I    EDPEP SV ECQ R DW KWKDAIQ ELNSL+KR VFGPIV TP+ 
Sbjct: 156 -FSYLVSKEINEEIEDPEPMSVYECQKRHDWIKWKDAIQVELNSLDKRNVFGPIVATPKG 214

Query: 364 VRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLA 543
           V+PVGYKWVFVRKRNE+NEI RYKARLVAQGFSQRPGIDY ETYSPV+DAITFR+L+ LA
Sbjct: 215 VKPVGYKWVFVRKRNEENEITRYKARLVAQGFSQRPGIDYKETYSPVVDAITFRFLMSLA 274

Query: 544 VSKNLEMRLMDVVTA 588
             KNLEMRLMDVVTA
Sbjct: 275 ADKNLEMRLMDVVTA 289


>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
          Length = 1306

 Score =  264 bits (675), Expect = 3e-78
 Identities = 130/201 (64%), Positives = 155/201 (77%)
 Frame = +1

Query: 13   DDPNMEECVPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFS 192
            +DP++E   PEE Q               + EN EIS+ YV TG  W+RN +  I+  F+
Sbjct: 776  EDPHIEREAPEEAQ---------------VPENCEISVSYVQTGEKWDRNNIV-INNIFA 819

Query: 193  YSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRP 372
            + VA DI    EDPEPR+V EC++R DW KWK+ IQAELNSL KR+VFGP+V TPE V+P
Sbjct: 820  FQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEXIQAELNSLTKREVFGPVVQTPEDVKP 879

Query: 373  VGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSK 552
            VGYKWVFVRKRNE NEI+RYKARLVAQGFSQRPGIDY+ETYSPVMDAITFR+LI LAVS+
Sbjct: 880  VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 939

Query: 553  NLEMRLMDVVTAYLYGSLDSD 615
             L+MRLMDV+TAYLYGS+D+D
Sbjct: 940  GLDMRLMDVITAYLYGSMDND 960


>gb|AQY61302.1| Pol [Vitis vinifera]
          Length = 1223

 Score =  259 bits (662), Expect = 1e-76
 Identities = 127/201 (63%), Positives = 154/201 (76%)
 Frame = +1

Query: 13   DDPNMEECVPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFS 192
            +DP++E   PEE Q               + EN EIS+ YV TG  W+RN +  I+  F+
Sbjct: 619  EDPHIEREAPEEAQ---------------VPENCEISVSYVQTGEKWDRNNIV-INNIFA 662

Query: 193  YSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRP 372
            + VA DI    EDPEPR+V EC++R DW KWK+AIQAELNSL KR+VFG +V TP+ V+P
Sbjct: 663  FQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGHVVQTPKDVKP 722

Query: 373  VGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSK 552
            VGYKWVFVRKRNE NEI+RYKARLVAQGFSQRPGIDY+ETYSPVMD ITFR+LI LA+S+
Sbjct: 723  VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDTITFRFLISLAISE 782

Query: 553  NLEMRLMDVVTAYLYGSLDSD 615
             L+MRLMDV+TAYLYGS+D+D
Sbjct: 783  GLDMRLMDVITAYLYGSMDND 803


>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score =  253 bits (645), Expect = 4e-76
 Identities = 128/199 (64%), Positives = 152/199 (76%)
 Frame = +1

Query: 13  DDPNMEECVPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFS 192
           DD  ++E   +ETQ  T+ E           +N EIS++YV+T   WNRN +  ID  F+
Sbjct: 299 DDHGLKEISQDETQVITHDE-----EEVRTSQNNEISMNYVSTRKFWNRNNVV-IDNIFA 352

Query: 193 YSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRP 372
           Y+VA +I    ED EP+SV EC+ R DW KWKDAIQAEL SL KR+ FGPI+ TPE ++P
Sbjct: 353 YNVAIEIMQQDEDSEPKSVHECRQRNDWPKWKDAIQAELASLEKRESFGPIIRTPEGIKP 412

Query: 373 VGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSK 552
           VGYKW+FVRKRNEK E++RYKARLVAQGFSQRPGIDY ETYSPV+DAITFRYLI+LAV +
Sbjct: 413 VGYKWIFVRKRNEKGEVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVYE 472

Query: 553 NLEMRLMDVVTAYLYGSLD 609
            LEMRLMDVVTAYLYGSLD
Sbjct: 473 KLEMRLMDVVTAYLYGSLD 491


>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
          Length = 701

 Score =  251 bits (640), Expect = 5e-76
 Identities = 121/172 (70%), Positives = 142/172 (82%)
 Frame = +1

Query: 100 IKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNRQDWA 279
           + EN EISI YV TG  W+RN +  I+  F++ VA DI    EDPEPR+V EC++R DW 
Sbjct: 122 VPENCEISISYVQTGEKWDRNNII-INNIFAFQVASDIIRNXEDPEPRNVEECRHRNDWP 180

Query: 280 KWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGF 459
           KWK+AIQAELNSL KR+VFGPIV TPE V+PVGYKWVFVRK NE NEI+RYKARLVAQGF
Sbjct: 181 KWKEAIQAELNSLTKREVFGPIVQTPEDVKPVGYKWVFVRKPNENNEIIRYKARLVAQGF 240

Query: 460 SQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
           SQRPGIDY+ETYSP+MDAITFR+LI LAV + L+M LMDV+T YLYGS+D+D
Sbjct: 241 SQRPGIDYEETYSPIMDAITFRFLISLAVLEGLDMCLMDVITTYLYGSMDND 292


>gb|KYP77193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 588

 Score =  247 bits (631), Expect = 1e-75
 Identities = 124/193 (64%), Positives = 149/193 (77%)
 Frame = +1

Query: 37  VPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIA 216
           VPEETQ             PEI EN EISI+YV  G  WNRN + +ID+ F+Y++A +  
Sbjct: 283 VPEETQ------------VPEIIENEEISINYVMNGIRWNRNNV-NIDDVFAYNIALNEI 329

Query: 217 NGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFV 396
           N  ED EP+S+ +C+ R DW KWKDAI+AEL+SL KRKVFGP++ TP+ V+P+GYKWVFV
Sbjct: 330 NDIEDQEPKSINDCRQRNDWPKWKDAIEAELDSLAKRKVFGPVLRTPKGVKPIGYKWVFV 389

Query: 397 RKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMD 576
           RKRNE  EIVRYKARLVAQGFSQRPGID++ETYSPV+DA TFRYLI L V + L + LMD
Sbjct: 390 RKRNENGEIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMD 449

Query: 577 VVTAYLYGSLDSD 615
           VVTAYLYGSLD+D
Sbjct: 450 VVTAYLYGSLDAD 462


>gb|PRQ50148.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 160

 Score =  231 bits (588), Expect = 2e-74
 Identities = 114/162 (70%), Positives = 136/162 (83%)
 Frame = +1

Query: 124 IDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQA 303
           +DY +   L  R+ +  ID+ F+Y+VA +I    +D EPRSVAECQ R DW KWK+AIQA
Sbjct: 1   MDYESAYELMERSSIH-IDDVFAYTVAQEIIE-HDDIEPRSVAECQQRADWPKWKEAIQA 58

Query: 304 ELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDY 483
           EL+SL KR+VFGP+VLTP +V+PVG+KWVFVRKRNEKNE++RYKARLVAQGFSQRPGIDY
Sbjct: 59  ELDSLTKRQVFGPVVLTPPSVKPVGHKWVFVRKRNEKNEVLRYKARLVAQGFSQRPGIDY 118

Query: 484 DETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLD 609
           +ETYSPVMD ITFRYL+ L VS+ LEM+LMDVVTAYLYG LD
Sbjct: 119 EETYSPVMDVITFRYLVSLVVSEGLEMQLMDVVTAYLYGDLD 160


>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
          Length = 570

 Score =  243 bits (620), Expect = 3e-74
 Identities = 119/192 (61%), Positives = 151/192 (78%), Gaps = 3/192 (1%)
 Frame = +1

Query: 49  TQDKTNQET---LDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIAN 219
           ++DKT +E     + +   +  EN EISI YV+TG  W+ N +  I+  F++ VA DI  
Sbjct: 75  SKDKTPEEAHIEREALEEAQEPENCEISISYVHTGEKWDWNNIV-INNIFAFQVASDIIR 133

Query: 220 GSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVR 399
             ED +PRSV EC++R DW KWK+ IQAELNSL KR++FGPIV TPE V+P+GYKWVFVR
Sbjct: 134 NYEDLKPRSVEECRHRNDWPKWKEVIQAELNSLTKREIFGPIVKTPEDVKPIGYKWVFVR 193

Query: 400 KRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDV 579
           K +E NEI+RYKARLVAQGFSQRPG+DY+ETYSPV+DAITFR+LI LAVS+ L+MRLM+V
Sbjct: 194 KCDENNEIIRYKARLVAQGFSQRPGVDYEETYSPVIDAITFRFLISLAVSEGLDMRLMNV 253

Query: 580 VTAYLYGSLDSD 615
           +T YLYGS+D+D
Sbjct: 254 ITTYLYGSIDND 265


>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
           vesca subsp. vesca]
          Length = 521

 Score =  241 bits (614), Expect = 8e-74
 Identities = 121/175 (69%), Positives = 144/175 (82%)
 Frame = +1

Query: 91  SPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNRQ 270
           S    EN+EIS+ Y NT  L NR+    +D+ F+YSVA +I    +D EPRSVAECQNR 
Sbjct: 264 SMSTSENIEISMCYDNTYELMNRSSTH-VDDIFAYSVAHEIIE-HDDIEPRSVAECQNRA 321

Query: 271 DWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLVA 450
           DW KWK AIQAEL+SL KR+VFGP++LTP +V+PVG+KWVFVRKRNEKNE++ YKARLVA
Sbjct: 322 DWPKWKVAIQAELDSLTKRQVFGPVMLTPPSVKPVGHKWVFVRKRNEKNEVLLYKARLVA 381

Query: 451 QGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
           QGFSQRPGIDY+ETYSPVMD ITFRYL+ L VS+ L+M+LMDVVTAYLYG LDS+
Sbjct: 382 QGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYGDLDSE 436


>gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 834

 Score =  247 bits (631), Expect = 1e-73
 Identities = 124/193 (64%), Positives = 149/193 (77%)
 Frame = +1

Query: 37  VPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIA 216
           VPEETQ             PEI EN EISI+YV  G  WNRN + +ID+ F+Y++A +  
Sbjct: 352 VPEETQ------------VPEIIENEEISINYVMNGIRWNRNNV-NIDDVFAYNIALNEI 398

Query: 217 NGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFV 396
           N  ED EP+S+ +C+ R DW KWKDAI+AEL+SL KRKVFGP++ TP+ V+P+GYKWVFV
Sbjct: 399 NDIEDQEPKSINDCRQRNDWPKWKDAIEAELDSLAKRKVFGPVLRTPKGVKPIGYKWVFV 458

Query: 397 RKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMD 576
           RKRNE  EIVRYKARLVAQGFSQRPGID++ETYSPV+DA TFRYLI L V + L + LMD
Sbjct: 459 RKRNENGEIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMD 518

Query: 577 VVTAYLYGSLDSD 615
           VVTAYLYGSLD+D
Sbjct: 519 VVTAYLYGSLDAD 531


>gb|AQY61300.1| Pol [Coffea eugenioides]
          Length = 1160

 Score =  251 bits (640), Expect = 1e-73
 Identities = 130/206 (63%), Positives = 154/206 (74%), Gaps = 3/206 (1%)
 Frame = +1

Query: 7    KHDDPNMEECVPEET-QDKTNQETLDVVNSPEIKEN--LEISIDYVNTGGLWNRNEMEDI 177
            K  +P  +  V E T  DK           P ++EN  +E SI++V +   WNR E+  I
Sbjct: 545  KDKNPRKKRGVDESTISDKIQPPEEVAPKEPILEENEIMENSINFVTSKKSWNRKEII-I 603

Query: 178  DEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTP 357
            D  F+Y++A DI    ED EPRSV EC+ R DW KWKDAIQ+EL+SL KRKVFGP+V TP
Sbjct: 604  DNIFAYNIALDIMAEDEDHEPRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTP 663

Query: 358  EAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIH 537
            E V+PVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPG DYDETYSPV+DAITFRYL+ 
Sbjct: 664  EGVKPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVS 723

Query: 538  LAVSKNLEMRLMDVVTAYLYGSLDSD 615
             AV + L+MRLMDVVTAYLYG+L++D
Sbjct: 724  FAVHEKLDMRLMDVVTAYLYGNLEND 749


>gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 814

 Score =  246 bits (628), Expect = 2e-73
 Identities = 122/196 (62%), Positives = 150/196 (76%)
 Frame = +1

Query: 28  EECVPEETQDKTNQETLDVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVAC 207
           ++ +PEETQ             PEI EN EISI+YV  G  WNRN + +ID+ F+Y++A 
Sbjct: 219 KDIIPEETQ------------VPEIIENEEISINYVMNGIRWNRNNV-NIDDVFAYNIAL 265

Query: 208 DIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKW 387
           +  N  ED EP+S+ +C+ R DW KWKDAI+AEL+SL KRKVFGP++ TP+ V+P+GYKW
Sbjct: 266 NEINDIEDQEPKSINDCRQRNDWPKWKDAIEAELDSLAKRKVFGPVLRTPKGVKPIGYKW 325

Query: 388 VFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMR 567
           VFVRKRNE  EIVRYKARLVAQGFSQRPGID++ETYSPV+DA TFRYLI L V + L + 
Sbjct: 326 VFVRKRNENGEIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLH 385

Query: 568 LMDVVTAYLYGSLDSD 615
           LMDVVT YLYGSLD+D
Sbjct: 386 LMDVVTTYLYGSLDAD 401


>gb|AQY61299.1| Pol [Coffea canephora]
          Length = 1160

 Score =  247 bits (631), Expect = 2e-72
 Identities = 128/206 (62%), Positives = 153/206 (74%), Gaps = 3/206 (1%)
 Frame = +1

Query: 7    KHDDPNMEECVPEET-QDKTNQETLDVVNSPEIKEN--LEISIDYVNTGGLWNRNEMEDI 177
            K  +P  +  + E T  DK           P ++EN  +E SI++V +   WNR E+  I
Sbjct: 545  KDKNPRKKRGIDESTISDKIQPPEEVAPKEPILEENETIENSINFVTSRKSWNRKEII-I 603

Query: 178  DEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTP 357
            D  F+Y++A DI    ED EPRSV EC+ R DW KWKDAIQ+EL+SL KRKVFGP+V TP
Sbjct: 604  DNIFAYNIALDIMAEDEDHEPRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTP 663

Query: 358  EAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIH 537
            E V+PVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRP  DYDETYSPV+DAITFRYL+ 
Sbjct: 664  EGVKPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPRFDYDETYSPVVDAITFRYLVS 723

Query: 538  LAVSKNLEMRLMDVVTAYLYGSLDSD 615
             AV + L+MRLMDVVTAYLYG+L++D
Sbjct: 724  FAVHEKLDMRLMDVVTAYLYGNLEND 749


>gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 797

 Score =  242 bits (617), Expect = 6e-72
 Identities = 121/170 (71%), Positives = 140/170 (82%)
 Frame = +1

Query: 106 ENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKW 285
           EN EISI+Y     +WNRNE+  ID+ F ++VA +I   S+D EPRSV ECQ R DW KW
Sbjct: 207 ENREISINYACLSEIWNRNEII-IDDIFVFAVATEIIT-SDDVEPRSVDECQRRDDWPKW 264

Query: 286 KDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQ 465
           K+AIQ EL+SL KRKVFGP+V TP  V+PVG+KWVFVRKRNE NEIVRYKARLVAQGFSQ
Sbjct: 265 KEAIQVELDSLTKRKVFGPVVPTPRHVKPVGFKWVFVRKRNEGNEIVRYKARLVAQGFSQ 324

Query: 466 RPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
           RPGIDYDETYSPVMD ITFRYLI LA+S+ L ++LMDVVTAYLYG LD++
Sbjct: 325 RPGIDYDETYSPVMDVITFRYLISLAISEKLNIQLMDVVTAYLYGDLDTE 374


>gb|AQY61295.1| Pol [Coffea arabica]
          Length = 1160

 Score =  246 bits (627), Expect = 7e-72
 Identities = 127/206 (61%), Positives = 153/206 (74%), Gaps = 3/206 (1%)
 Frame = +1

Query: 7    KHDDPNMEECVPEET-QDKTNQETLDVVNSPEIKEN--LEISIDYVNTGGLWNRNEMEDI 177
            K  +P  +  + E T  DK           P ++EN  +E SI+++ +   WNR E+  I
Sbjct: 545  KDKNPRKKREIDESTISDKIQPPEEVAPKEPILEENETIENSINFITSRKSWNRKEII-I 603

Query: 178  DEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTP 357
            D  F+Y++A DI    ED E RSV EC+ R DW KWKDAIQ+EL+SL KRKVFGP+V TP
Sbjct: 604  DNIFAYNIALDIMAEDEDHELRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTP 663

Query: 358  EAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIH 537
            E V+PVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPG DYDETYSPV+DAITFRYL+ 
Sbjct: 664  EGVKPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVS 723

Query: 538  LAVSKNLEMRLMDVVTAYLYGSLDSD 615
             AV + L+MRLMDVVTAYLYG+L++D
Sbjct: 724  FAVHEKLDMRLMDVVTAYLYGNLEND 749


>gb|PRQ53193.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 945

 Score =  243 bits (619), Expect = 2e-71
 Identities = 123/179 (68%), Positives = 142/179 (79%)
 Frame = +1

Query: 79  DVVNSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAEC 258
           D   S  I EN+EIS++Y +  G W RN +  ID+ F+YSVA +I   ++D EPRSV EC
Sbjct: 459 DASVSEPIHENIEISVNYTSVHGTWERNSII-IDDVFAYSVAREIIE-TDDIEPRSVDEC 516

Query: 259 QNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKA 438
           Q R DW KWKDAIQAEL+SL KRKVFG IV  P   +PVG+KWVFVRKRNEKNEIVRYKA
Sbjct: 517 QRRADWPKWKDAIQAELDSLTKRKVFGKIVPIPPNTKPVGHKWVFVRKRNEKNEIVRYKA 576

Query: 439 RLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
           RLVAQGFSQRPGIDY+ETYSPVMD ITFRYL+ L VS+ L M+LMDVVTAYLYG LD++
Sbjct: 577 RLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLNMQLMDVVTAYLYGDLDTE 635


>gb|AQY61297.1| Pol [Coffea canephora]
          Length = 1045

 Score =  240 bits (613), Expect = 3e-70
 Identities = 119/180 (66%), Positives = 144/180 (80%), Gaps = 4/180 (2%)
 Frame = +1

Query: 88  NSPEIKENLEISIDYVNTGGL----WNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAE 255
           N P+ +   +IS++++++       WNR E+  ID  F+Y++A DI    ED EPRSV E
Sbjct: 456 NQPKKEITWKISLNFLDSRTKECKNWNRKEII-IDNIFAYNIALDIMAEDEDHEPRSVDE 514

Query: 256 CQNRQDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYK 435
           C+ R DW KWKDAIQ+EL+SL KRKVFGP+V TPE + PVGYKWVFVRKRNEKNEIVRYK
Sbjct: 515 CRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTPEGIEPVGYKWVFVRKRNEKNEIVRYK 574

Query: 436 ARLVAQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
           ARLVAQGFSQRPG DYDETYSPV+DAITFRYL+  AV + L+MRLMDVVTAYLYG+L++D
Sbjct: 575 ARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLYGNLEND 634


>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
          Length = 1123

 Score =  240 bits (613), Expect = 5e-70
 Identities = 117/176 (66%), Positives = 143/176 (81%)
 Frame = +1

Query: 88   NSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNR 267
            + PE  +N EISI+Y+ +G  WNR E+ D+DEKF+Y VA +I   SED EP S+ EC  R
Sbjct: 561  HGPEGIDNDEISINYIMSGIKWNRKEV-DVDEKFAYEVAYEI---SEDHEPTSIIECTQR 616

Query: 268  QDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLV 447
             DW KWK+AI  EL SL +R VFGPI+ TP  ++PVG+KWVFVRKRNEKNEIVR+KARLV
Sbjct: 617  SDWLKWKEAIDVELGSLKRRDVFGPILRTPSNIKPVGHKWVFVRKRNEKNEIVRHKARLV 676

Query: 448  AQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
            AQGFSQRPG+DY+ETYSPV+DA TFRYLI LA+ +NL++RLMDVVTAYLYG LD++
Sbjct: 677  AQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYGPLDNE 732


>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
          Length = 1141

 Score =  240 bits (613), Expect = 5e-70
 Identities = 117/176 (66%), Positives = 143/176 (81%)
 Frame = +1

Query: 88   NSPEIKENLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNR 267
            + PE  +N EISI+Y+ +G  WNR E+ D+DEKF+Y VA +I   +ED EP S+ EC  R
Sbjct: 561  HGPEGIDNDEISINYIMSGIKWNRKEV-DVDEKFAYEVAYEI---NEDHEPTSIIECTQR 616

Query: 268  QDWAKWKDAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLV 447
             DW KWK+AI  EL SL KR VFGPI+ TP  ++PVG+KWVFVRKRNEKNEIVR+KARLV
Sbjct: 617  SDWLKWKEAIDVELGSLKKRDVFGPILRTPSNIKPVGHKWVFVRKRNEKNEIVRHKARLV 676

Query: 448  AQGFSQRPGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
            AQGFSQRPG+DY+ETYSPV+DA TFRYLI LA+ +NL++RLMDVVTAYLYG LD++
Sbjct: 677  AQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYGPLDNE 732


>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
          Length = 1190

 Score =  240 bits (612), Expect = 9e-70
 Identities = 114/169 (67%), Positives = 145/169 (85%)
 Frame = +1

Query: 109  NLEISIDYVNTGGLWNRNEMEDIDEKFSYSVACDIANGSEDPEPRSVAECQNRQDWAKWK 288
            N+E +I++V+TG  +NR ++  +D+ F+Y+VA +I + + DPEP+S+ ECQ R DW KWK
Sbjct: 601  NIETAINFVDTGETYNR-DLIVVDDTFAYAVAHNIPHNNLDPEPKSITECQKRPDWLKWK 659

Query: 289  DAIQAELNSLNKRKVFGPIVLTPEAVRPVGYKWVFVRKRNEKNEIVRYKARLVAQGFSQR 468
            +AI+AELNSLNKRKVFGP VLTP+ V PVG KWVFVRKRNE NE+VRYKARLVAQGF+QR
Sbjct: 660  EAIEAELNSLNKRKVFGPTVLTPKDVIPVGSKWVFVRKRNENNEVVRYKARLVAQGFTQR 719

Query: 469  PGIDYDETYSPVMDAITFRYLIHLAVSKNLEMRLMDVVTAYLYGSLDSD 615
            PGID+++TYSPV+D I+FRYLI LAV+  L+M+LMDVVTAYLYGSLD+D
Sbjct: 720  PGIDFEQTYSPVIDGISFRYLISLAVNMKLDMQLMDVVTAYLYGSLDAD 768