BLASTX nr result
ID: Ophiopogon26_contig00013053
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00013053
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposo... 170 4e-50
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 169 4e-48
gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposo... 162 1e-46
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 170 3e-45
gb|PKU80393.1| Retrovirus-related Pol polyprotein from transposo... 155 2e-43
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo... 157 2e-43
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 164 2e-43
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 164 2e-43
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao] 154 4e-43
gb|KYP63309.1| Retrovirus-related Pol polyprotein from transposo... 153 6e-43
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo... 155 1e-42
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 161 4e-42
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 160 1e-41
gb|AAK29467.1| polyprotein-like [Solanum chilense] 159 2e-41
gb|PKU73350.1| Retrovirus-related Pol polyprotein from transposo... 149 5e-41
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 152 6e-41
gb|KYP69065.1| Retrovirus-related Pol polyprotein from transposo... 148 2e-40
gb|KYP38865.1| Retrovirus-related Pol polyprotein from transposo... 145 3e-40
gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposo... 148 3e-40
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo... 146 4e-40
>gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 198
Score = 170 bits (430), Expect = 4e-50
Identities = 80/135 (59%), Positives = 110/135 (81%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA+STIQLCLADEV+YN+ D +++ LW +LE YM+KSL+NKLY+K+QLY LRM E
Sbjct: 57 KASSTIQLCLADEVLYNIFDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYSLRMSEEAD 116
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+LEH+N F+KIIS+ ++DVK++EEDK L+LLS LP SYDH+VTT+LY K+TL +E+V +
Sbjct: 117 LLEHMNIFSKIISQFHSIDVKLEEEDKTLLLLSLLPKSYDHLVTTILYDKDTLKVEKVNA 176
Query: 239 TLLSNEIRKRPNQVE 195
TLLSNE++ + + E
Sbjct: 177 TLLSNEVQNKQSPSE 191
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 169 bits (428), Expect = 4e-48
Identities = 91/205 (44%), Positives = 139/205 (67%), Gaps = 10/205 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA STI L L DEV+ V +E SA G+WL+LE+LYMTKSL+NKLYLKK+L+ L+M+EG++
Sbjct: 57 KAHSTIILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSS 116
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ EH++ F K + +L +VDV+IDEED+A++LL SLP S++++V TML+G++TL LEEV +
Sbjct: 117 IKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKA 176
Query: 239 TLLSNEIRKRPNQVEQEGLG---------LVVTXXXXXXXXXXXXXXXKVCHFCHREGHF 87
TL S E++K+ + + EG L K C++C +EGHF
Sbjct: 177 TLNSRELKKKITENKGEGGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCKKEGHF 236
Query: 86 KKDCKHRQEWLKKKGQ-AEETNVAM 15
+K+C R++ K G+ +E+++A+
Sbjct: 237 RKECPERKK--KNNGKYNDESDIAV 259
>gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 249
Score = 162 bits (411), Expect = 1e-46
Identities = 76/135 (56%), Positives = 107/135 (79%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA STIQLCLADEV+YN+ D +++ LW +LE YM+KSL+NKLY+K+QLY LRM EG
Sbjct: 112 KALSTIQLCLADEVLYNISDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYNLRMSEGAN 171
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+LEH+N F+K+IS+ +++VK+ E+D L+ LS LP SY+H++ T+LYGK+TL +EEV +
Sbjct: 172 LLEHMNVFSKMISQFHSIEVKLQEKDVILLFLSLLPKSYNHLIITILYGKDTLKVEEVNA 231
Query: 239 TLLSNEIRKRPNQVE 195
TLLSNE+R + + E
Sbjct: 232 TLLSNEVRNKQSTDE 246
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 170 bits (430), Expect = 3e-45
Identities = 95/211 (45%), Positives = 136/211 (64%), Gaps = 17/211 (8%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
+AAS I+L L+D+V+ N++DED+A G+W RLE+LYM+K+L+NKLYLKKQLY L M EGT
Sbjct: 58 RAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTN 117
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
L HLN FN +I++L + VKI+EEDKA++LL+SLP SYD++ TT+L+GK T+ L++VTS
Sbjct: 118 FLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTS 177
Query: 239 TLLSNE-IRKRPNQVEQEGLGLVV---------------TXXXXXXXXXXXXXXXKVCHF 108
LL NE +RK+P E +G L+ + C+
Sbjct: 178 ALLLNEKMRKKP---ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYN 234
Query: 107 CHREGHFKKDCKH-RQEWLKKKGQAEETNVA 18
C++ GHFK+DC + R+ + GQ + N A
Sbjct: 235 CNQPGHFKRDCPNPRKGKGETSGQKNDDNTA 265
>gb|PKU80393.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 257
Score = 155 bits (391), Expect = 2e-43
Identities = 79/183 (43%), Positives = 122/183 (66%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L + +EV+ V +ED+A +W ++E++YM KSL+N+L LKKQLY L+M+E
Sbjct: 57 KAHSIILLSIGNEVLREVAEEDTALKVWRKIESIYMKKSLTNRLLLKKQLYMLQMEENQE 116
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+++HLN FNK+I +L VDVKIDEED+ +ILLSSLP +Y++IV TMLYGK+TL L EV S
Sbjct: 117 LIKHLNDFNKLILDLRNVDVKIDEEDQGIILLSSLPKTYENIVDTMLYGKQTLTLTEVKS 176
Query: 239 TLLSNEIRKRPNQVEQEGLGLVVTXXXXXXXXXXXXXXXKVCHFCHREGHFKKDCKHRQE 60
L+S ++R++ +Q E + +++ C+ C++E H K+ C + +
Sbjct: 177 VLMSKDVRRKSDQKEDKNGNILIARGRSESRRFNTNRK---CYHCNKEWHIKRFCPNYSQ 233
Query: 59 WLK 51
++
Sbjct: 234 GIE 236
>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 157 bits (398), Expect = 2e-43
Identities = 88/196 (44%), Positives = 120/196 (61%), Gaps = 9/196 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L+DEV+Y V DE++A GLW +LE LYMTKS+ NKL LK++L+GL M+EGT
Sbjct: 69 KAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTP 128
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +HL+ N ++ EL +DVKI++ED A+ILL+SLP SY+ V ++ GKE + +EEV S
Sbjct: 129 LKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVGKECITMEEVKS 188
Query: 239 TLLSNEIRKRP--NQVEQEGLGLVVT-------XXXXXXXXXXXXXXXKVCHFCHREGHF 87
+L S E R R N E G LVV+ +C++C GH+
Sbjct: 189 SLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKEPGHW 248
Query: 86 KKDCKHRQEWLKKKGQ 39
KKDC KKKG+
Sbjct: 249 KKDCP------KKKGK 258
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 164 bits (416), Expect = 2e-43
Identities = 94/204 (46%), Positives = 129/204 (63%), Gaps = 10/204 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
+A S I LCL DEV+ V DE +A GLWLRLE+ YMTKSL+N+LYLK++LY L+M+EGT
Sbjct: 582 RAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTP 641
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
V +HL+ FN II +L +D KID+ED+A+I+L SLP SY++ V TM+YG++ L LEEV +
Sbjct: 642 VSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKN 701
Query: 239 TLLSNEIRKR--PNQVE-QEGLGLVVT-------XXXXXXXXXXXXXXXKVCHFCHREGH 90
L S+E+RK+ VE EG GLV C++C + GH
Sbjct: 702 ALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGH 761
Query: 89 FKKDCKHRQEWLKKKGQAEETNVA 18
K DC R+E K + Q ++ + A
Sbjct: 762 MKVDCPKRKE--KSESQEQQNDRA 783
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 164 bits (416), Expect = 2e-43
Identities = 94/204 (46%), Positives = 129/204 (63%), Gaps = 10/204 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
+A S I LCL DEV+ V DE +A GLWLRLE+ YMTKSL+N+LYLK++LY L+M+EGT
Sbjct: 561 RAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTP 620
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
V +HL+ FN II +L +D KID+ED+A+I+L SLP SY++ V TM+YG++ L LEEV +
Sbjct: 621 VSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKN 680
Query: 239 TLLSNEIRKR--PNQVE-QEGLGLVVT-------XXXXXXXXXXXXXXXKVCHFCHREGH 90
L S+E+RK+ VE EG GLV C++C + GH
Sbjct: 681 ALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGH 740
Query: 89 FKKDCKHRQEWLKKKGQAEETNVA 18
K DC R+E K + Q ++ + A
Sbjct: 741 MKVDCPKRKE--KSESQEQQNDRA 762
>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 154 bits (390), Expect = 4e-43
Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L+DEV+ V DE+SA +W +LE++Y+TKSL+N+LY+K++LY L+M EGT+
Sbjct: 60 KAHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTS 119
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
V H++ FN++I +L +DVKI++ED ALILL LP SY++ V TMLYG++TL E+V +
Sbjct: 120 VNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRA 179
Query: 239 TLLSNEIRKRPNQV--EQEGLGLVVT----XXXXXXXXXXXXXXXKVCHFCHREGHFKKD 78
L S E++K+ + E + GLVV K C C ++GHF++D
Sbjct: 180 YLNSKELKKKVGGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKGKTCWNCGQKGHFRQD 239
Query: 77 CKHRQEWLKKKGQAEETNVAMSSFD 3
C ++ K NV FD
Sbjct: 240 CTKFKDDEKFNKSENTANVVGDDFD 264
>gb|KYP63309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 240
Score = 153 bits (386), Expect = 6e-43
Identities = 85/187 (45%), Positives = 119/187 (63%), Gaps = 8/187 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L DEV+ V +E +A +W +LE+LY+ +SL+N+LYLKK+LY L+M+E +
Sbjct: 33 KAYSAILLSLGDEVLREVAEEKTAMEIWKKLESLYLKRSLANRLYLKKRLYTLQMEEEKS 92
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +H++ FNKII +L ++DVKID+ED+A+ILLSSLP ++H V TMLYGK +LI+ EV +
Sbjct: 93 LKKHVDDFNKIILDLKSIDVKIDDEDQAIILLSSLPKRFEHFVDTMLYGKASLIMAEVKA 152
Query: 239 TLLSNEI-RKRPNQVEQEGLGLVVTXXXXXXXXXXXXXXXKV-------CHFCHREGHFK 84
TL S EI R ++ EQ GL C C +EGHFK
Sbjct: 153 TLNSKEIQRNGDSKGEQVAEGLFTRGRQEKKDFKQKKSSRSKSKGKNKRCFICDKEGHFK 212
Query: 83 KDCKHRQ 63
KDC +R+
Sbjct: 213 KDCPNRE 219
>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 352
Score = 155 bits (392), Expect = 1e-42
Identities = 87/196 (44%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L+DEV+Y V DE++A GLW +LE LYMTKS+ NKL LK++L+GL M+EGT
Sbjct: 69 KAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTP 128
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +HL+ N ++ EL +DVKI++ED A+ILL+ LP SY+ V ++ GKE + +EEV S
Sbjct: 129 LKDHLDELNSVLMELRDIDVKIEDEDAAMILLAYLPPSYESFVNSLSVGKECITMEEVKS 188
Query: 239 TLLSNEIRKRP--NQVEQEGLGLVVT-------XXXXXXXXXXXXXXXKVCHFCHREGHF 87
+L S E R R N E G LVV+ +C++C GH+
Sbjct: 189 SLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKEPGHW 248
Query: 86 KKDCKHRQEWLKKKGQ 39
KKDC KKKG+
Sbjct: 249 KKDCP------KKKGK 258
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 161 bits (407), Expect = 4e-42
Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 9/203 (4%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA STI LCLAD+V+ V DE++A GLWL+LE+LYMTKSL+NKL LK++L+GLRM EGT
Sbjct: 55 KAHSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQ 114
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ EHL N ++ EL +DVKI++ED ALILL SLP S+++ V + + GK+T+ LEEV S
Sbjct: 115 LREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRS 174
Query: 239 TLLSNEIRKRPN--QVEQEGLGLVVT-------XXXXXXXXXXXXXXXKVCHFCHREGHF 87
L S E+R + N + + GL + VC++C +GH+
Sbjct: 175 ALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHW 234
Query: 86 KKDCKHRQEWLKKKGQAEETNVA 18
K DC KKK Q+E+ +V+
Sbjct: 235 KFDCP------KKKKQSEKQSVS 251
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 160 bits (404), Expect = 1e-41
Identities = 88/190 (46%), Positives = 117/190 (61%), Gaps = 11/190 (5%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I LCL DEV+ V +E SA LW +LE+LY+ +SL+N+LYLKK LY + ++EG
Sbjct: 57 KAFSAILLCLGDEVLREVAEEVSALSLWNKLESLYLKRSLANRLYLKKSLYTIHLEEGKD 116
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +H++ FNKII +L VD+KI +ED A+++LSSLP SY+H V TMLYGKETL + EV S
Sbjct: 117 LKKHMDEFNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTMAEVKS 176
Query: 239 TLLSNEI-RKRPNQVEQEGLGLVV----------TXXXXXXXXXXXXXXXKVCHFCHREG 93
L S E+ +K ++E G GL V C CH+EG
Sbjct: 177 ALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFVCHKEG 236
Query: 92 HFKKDCKHRQ 63
HFKKDC R+
Sbjct: 237 HFKKDCPDRR 246
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 159 bits (402), Expect = 2e-41
Identities = 93/208 (44%), Positives = 129/208 (62%), Gaps = 14/208 (6%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KAAS I+L L D+V+ N++DE+SA G+W +LE LYM+K+L+NKLYLKKQLY L M EGT
Sbjct: 59 KAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTN 118
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
L HLN N +I++L + VKI+EEDK ++LL+SLP SYD + TT+L+GK+++ L++VTS
Sbjct: 119 FLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSIQLKDVTS 178
Query: 239 TLLSNE-IRKRPNQVEQ----EGLGLVVTXXXXXXXXXXXXXXXKV--------CHFCHR 99
LL NE +RK+P Q E G KV C+ C +
Sbjct: 179 ALLLNEKMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKARNCYNCDQ 238
Query: 98 EGHFKKDCKHRQEWL-KKKGQAEETNVA 18
GHFK+DC + + + GQ + N A
Sbjct: 239 PGHFKRDCPNPKRGKGESSGQKNDDNTA 266
>gb|PKU73350.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 261
Score = 149 bits (375), Expect = 5e-41
Identities = 77/175 (44%), Positives = 116/175 (66%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L + DEV+ V +ED+ +W +LE++YM KSL+N+L LKKQLY L+M+E
Sbjct: 57 KAHSIILLPIGDEVLREVAEEDTTLKVWRKLESIYMKKSLTNRLLLKKQLYTLQMEENQE 116
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +HL+ FNK+I +L+ V+VKIDEED+ +ILLSSLP +Y++IV MLYGK+TL L EV S
Sbjct: 117 LRKHLDDFNKLILDLINVNVKIDEEDQGIILLSSLPKTYENIVDIMLYGKQTLTLTEVKS 176
Query: 239 TLLSNEIRKRPNQVEQEGLGLVVTXXXXXXXXXXXXXXXKVCHFCHREGHFKKDC 75
L+S +++++ +Q E + +++ C+ C++EGH K C
Sbjct: 177 VLMSKDVQRKTDQKEDKNGNILIARGRSESRRINANRK---CYHCNKEGHIKWFC 228
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 152 bits (385), Expect = 6e-41
Identities = 77/179 (43%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
+AA+TI+L L+D VMY VMDE S +W +L +L+M+KSL++KLYLK+QLYGL++QE +
Sbjct: 59 QAAATIRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESD 118
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ +H++ FN+++ +L +DVK+D+EDKA+ILL SLP SY+H+VTT+ +GK+T+ EE+ S
Sbjct: 119 LRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTEEIIS 178
Query: 239 TLLSNEIRK-RPNQVEQEGLG---LVVTXXXXXXXXXXXXXXXKVCHFCHREGHFKKDC 75
+LL+ ++R+ + N+ + G LV C+ CH GH +++C
Sbjct: 179 SLLARDLRRSKKNEATKASQGKSLLVKDKHDHEAGVSKSKEKGARCYKCHEFGHIRRNC 237
>gb|KYP69065.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 285
Score = 148 bits (373), Expect = 2e-40
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L++EV+Y V D+++A GLWL+LE LYMTKS+ NKL LK++L+GL M+E T
Sbjct: 45 KAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKESTP 104
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ EHL+ FN I+ EL +DVKI++ED A+ILL+SLP SY+ V ++ GK+ + LEEV S
Sbjct: 105 LKEHLDEFNSILMELRDIDVKIEDEDSAMILLASLPPSYESFVNSLSVGKDFITLEEVKS 164
Query: 239 TLLSNEIRKRPNQ--VEQEGLGLVVT----------XXXXXXXXXXXXXXXKVCHFCHRE 96
+L ++R + + E G+GLVVT +C++C
Sbjct: 165 SLHLRDLRHKASASIEEPNGIGLVVTNLSKNSKKKKDKGKKKSKGNHINPKDICNYCKEP 224
Query: 95 GHFKKD 78
GH+K D
Sbjct: 225 GHWKND 230
>gb|KYP38865.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
gb|KYP38876.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 212
Score = 145 bits (366), Expect = 3e-40
Identities = 75/146 (51%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L+DEV+Y V D+++A GLWL+LE LYMTKS+ NKL LK++L+GL M+E T+
Sbjct: 45 KAHSLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKSVCNKLMLKRRLFGLHMKESTS 104
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ EHL+ FN I+ EL +DVKI++ED A+ILL+SLP SY+ V ++ GK+ + LEEV +
Sbjct: 105 LKEHLDEFNSILMELRDIDVKIEDEDSAMILLASLPPSYESFVNSLSVGKDFITLEEVKA 164
Query: 239 TLLSNEIRKRPNQVEQE--GLGLVVT 168
+L ++R + + +E G+GLVVT
Sbjct: 165 SLHLRDLRHKASASTEEPNGIGLVVT 190
>gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 307
Score = 148 bits (373), Expect = 3e-40
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S I L L++EV+Y V D+++A GLWL+LE LYMTKS+ NKL LK++L+GL M+E T
Sbjct: 67 KAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKESTP 126
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLYGKETLILEEVTS 240
+ EHL+ FN I+ EL +DVKI++ED A+ILL+SLP SY+ V ++ GK+ + LEEV S
Sbjct: 127 LKEHLDEFNSILMELRDIDVKIEDEDSAMILLASLPPSYESFVNSLSVGKDFITLEEVKS 186
Query: 239 TLLSNEIRKRPNQ--VEQEGLGLVVT----------XXXXXXXXXXXXXXXKVCHFCHRE 96
+L ++R + + E G+GLVVT +C++C
Sbjct: 187 SLHLRDLRHKASASIEEPNGIGLVVTNLSKNSKKKKDKGKKKSKGNHINPKDICNYCKEP 246
Query: 95 GHFKKD 78
GH+K D
Sbjct: 247 GHWKND 252
>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 262
Score = 146 bits (369), Expect = 4e-40
Identities = 92/211 (43%), Positives = 119/211 (56%), Gaps = 14/211 (6%)
Frame = -2
Query: 599 KAASTIQLCLADEVMYNVMDEDSAPGLWLRLEALYMTKSLSNKLYLKKQLYGLRMQEGTA 420
KA S IQLCL+ EV+ V +E +A LWL+LE+LYMTKSL+NKL LK++LY +RM EGT
Sbjct: 35 KALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTP 94
Query: 419 VLEHLNFFNKIISELLAVDVKIDEEDKALILLSSLPGSYDHIVTTMLY-GKETLILEEVT 243
+ HLN FN II +L +++KID+EDKA++L+ SLP +Y H MLY +TL E+V
Sbjct: 95 IQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVK 154
Query: 242 STLLSNEIRKRPNQVEQEGLGLVV---------TXXXXXXXXXXXXXXXKVCHFCHREGH 90
S LLS E E +G GL V T K C +C + GH
Sbjct: 155 SNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRRRKTNKTCRYCKKFGH 214
Query: 89 FKKDC---KHRQEWLKK-KGQAEETNVAMSS 9
DC K +QE +K K E NV S
Sbjct: 215 DISDCFILKKKQERQEKGKNPVEAANVETDS 245