BLASTX nr result

ID: Ophiopogon26_contig00012818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00012818
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250382.1| double-stranded RNA-binding protein 1-like [...    89   3e-18
ref|XP_019706585.1| PREDICTED: uncharacterized protein LOC105047...    56   2e-06
ref|XP_010924191.1| PREDICTED: uncharacterized protein LOC105047...    56   2e-06

>ref|XP_020250382.1| double-stranded RNA-binding protein 1-like [Asparagus officinalis]
 gb|ONK55143.1| uncharacterized protein A4U43_UnF7180 [Asparagus officinalis]
          Length = 351

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 68/169 (40%), Positives = 91/169 (53%), Gaps = 33/169 (19%)
 Frame = +1

Query: 1   ARAVIESILADSNTRRLMCEIVRSKRKLYAAFCKKSGFSGLPSERNFPLRSHTQNNPNDN 180
           ARA I+SILA+S+++  M E++RSK+KL AAF  KS  S L SER  P  SH Q NP+  
Sbjct: 158 ARAAIKSILANSDSQSPMLEVIRSKKKLCAAFF-KSNSSDLRSERIVPPISHCQINPSYV 216

Query: 181 VNGEELLAGSTNNQVHANICSGDEQIAKVAARETFTPE---------------------- 294
           V+ +E L  S N+++   +CSGDEQIAK  A ETF+PE                      
Sbjct: 217 VSEKEPLMNS-NSKLPEIMCSGDEQIAKANAAETFSPEAKKYEEEHTCELIIGLAERGGS 275

Query: 295 -----------ALTSNTSNSSDGVKLTEPSTGPEDSAGVALTGGTKRSD 408
                      A TS+  +SSDG +       PE+S+GV L  G KR++
Sbjct: 276 HKLPAETVPLAATTSSKFSSSDGEQFGS-YIRPENSSGVILASGMKRTE 323


>ref|XP_019706585.1| PREDICTED: uncharacterized protein LOC105047090 isoform X2 [Elaeis
           guineensis]
          Length = 430

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
 Frame = +1

Query: 1   ARAVIESILADSNTRRLMCEIVRSKRKLYAAFCKKSGFSGLPSERNFPLRSHTQNNPN-D 177
           ARAVIESILA SNTR LM +I++SK KL+AA  +++G SGL  + N       +N+ +  
Sbjct: 145 ARAVIESILAHSNTRILMSQIIKSKGKLFAAM-QQNGESGLSQQGNAAFGKPARNDSSIS 203

Query: 178 NVNGEELLAGSTNNQV-----HANICSGDEQIAKVAARETFTPEA 297
            V G+E+     N+ +     H  +  G   +A V AR  F PEA
Sbjct: 204 TVQGKEIQPAPENDDLVAVANHEQLLLGQLPVA-VEAR-PFLPEA 246


>ref|XP_010924191.1| PREDICTED: uncharacterized protein LOC105047090 isoform X1 [Elaeis
           guineensis]
 ref|XP_019706584.1| PREDICTED: uncharacterized protein LOC105047090 isoform X1 [Elaeis
           guineensis]
          Length = 431

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
 Frame = +1

Query: 1   ARAVIESILADSNTRRLMCEIVRSKRKLYAAFCKKSGFSGLPSERNFPLRSHTQNNPN-D 177
           ARAVIESILA SNTR LM +I++SK KL+AA  +++G SGL  + N       +N+ +  
Sbjct: 145 ARAVIESILAHSNTRILMSQIIKSKGKLFAAM-QQNGESGLSQQGNAAFGKPARNDSSIS 203

Query: 178 NVNGEELLAGSTNNQV-----HANICSGDEQIAKVAARETFTPEA 297
            V G+E+     N+ +     H  +  G   +A V AR  F PEA
Sbjct: 204 TVQGKEIQPAPENDDLVAVANHEQLLLGQLPVA-VEAR-PFLPEA 246


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