BLASTX nr result
ID: Ophiopogon26_contig00012590
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00012590
(734 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020253401.1| DNA-directed RNA polymerases II and IV subun... 296 7e-99
ref|XP_020100932.1| DNA-directed RNA polymerases II and IV subun... 272 2e-89
ref|XP_020254663.1| DNA-directed RNA polymerases II and IV subun... 271 4e-89
gb|PKA55370.1| hypothetical protein AXF42_Ash004009 [Apostasia s... 267 1e-87
ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II a... 266 2e-87
ref|XP_020532058.1| DNA-directed RNA polymerases II and IV subun... 266 6e-87
ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II a... 265 7e-87
ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II a... 265 1e-86
ref|XP_006858910.1| DNA-directed RNA polymerases II and IV subun... 265 1e-86
ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II a... 264 2e-86
ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II a... 264 3e-86
gb|OAY80387.1| DNA-directed RNA polymerases II and IV subunit 5A... 263 8e-86
ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subun... 261 2e-85
gb|AFK41303.1| unknown [Medicago truncatula] 261 3e-85
ref|XP_003610652.2| DNA-directed RNA polymerase II [Medicago tru... 261 3e-85
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II a... 261 3e-85
ref|XP_020101892.1| DNA-directed RNA polymerases II and IV subun... 261 5e-85
dbj|GAV91188.1| RNA_pol_Rpb5_C domain-containing protein/RNA_pol... 261 5e-85
ref|XP_020214903.1| DNA-directed RNA polymerases II and IV subun... 261 5e-85
gb|OVA00057.1| RNA polymerase [Macleaya cordata] 260 6e-85
>ref|XP_020253401.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Asparagus
officinalis]
gb|ONK77730.1| uncharacterized protein A4U43_C02F9950 [Asparagus officinalis]
Length = 206
Score = 296 bits (757), Expect = 7e-99
Identities = 144/204 (70%), Positives = 173/204 (84%)
Frame = +3
Query: 123 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKK 302
MAASEE ++LFRIRKN++EML DRGY+V D ELSMD+KQF+DKFG+S +R+DL INK K+
Sbjct: 1 MAASEEEVKLFRIRKNILEMLSDRGYVVADEELSMDFKQFRDKFGESFKREDLLINKYKR 60
Query: 303 DNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 482
DNP DQIYV F ND K+GA HIK Y ERM Q+ VF+ I+V+Q +++ FA + I DQ +
Sbjct: 61 DNPSDQIYVFFPNDPKVGASHIKRYAERMKQDSVFKAIVVVQ-QISSFAKKGIQDQSFAQ 119
Query: 483 RFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 662
+F VE+F EAEL+VNI++HMLVP HQVLSD EKKALLE YHLK+TQLPRIQL DPVARYH
Sbjct: 120 KFRVEIFQEAELVVNISKHMLVPPHQVLSDNEKKALLERYHLKETQLPRIQLDDPVARYH 179
Query: 663 GLRRGQVVKIIRPSETAGRYITYR 734
GL+RGQVVKIIRPS+TAGRYITYR
Sbjct: 180 GLQRGQVVKIIRPSDTAGRYITYR 203
>ref|XP_020100932.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
gb|OAY71099.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
Length = 205
Score = 272 bits (695), Expect = 2e-89
Identities = 133/204 (65%), Positives = 168/204 (82%)
Frame = +3
Query: 123 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKK 302
MA+ +E RLFRIR+ VM++L+DRGYLVLDVE+ M+ +QF DKFG+++RR+DL INKAKK
Sbjct: 1 MASDDEISRLFRIRRTVMQILRDRGYLVLDVEIEMNKRQFLDKFGEAVRREDLVINKAKK 60
Query: 303 DNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 482
++P DQIYV F + K+G K IK Y+ERM E V R ILV Q LTPFA ++ EV++
Sbjct: 61 NDPSDQIYVFFPEEPKVGVKQIKQYIERMKAENVMRGILVAQQNLTPFARSSL--LEVSQ 118
Query: 483 RFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 662
++H+EVF EAELLVNI H+LVPEHQ+L+ EEKK LLE Y +K+TQLPRIQ+TDP+ARY+
Sbjct: 119 KYHLEVFQEAELLVNIKEHVLVPEHQLLTPEEKKTLLERYTVKETQLPRIQVTDPIARYY 178
Query: 663 GLRRGQVVKIIRPSETAGRYITYR 734
GL+RGQVVKIIRPSETAGRY+TYR
Sbjct: 179 GLKRGQVVKIIRPSETAGRYVTYR 202
>ref|XP_020254663.1| DNA-directed RNA polymerases II and IV subunit 5A [Asparagus
officinalis]
gb|ONK78506.1| uncharacterized protein A4U43_C02F19500 [Asparagus officinalis]
Length = 205
Score = 271 bits (693), Expect = 4e-89
Identities = 134/204 (65%), Positives = 166/204 (81%)
Frame = +3
Query: 123 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKK 302
MA + + RLFRIR+ VMEML+DRGYLV+D E+ M +F +KFG+ ++R+DL I+K+KK
Sbjct: 1 MAEDQTASRLFRIRRTVMEMLRDRGYLVVDYEVKMSKNEFLNKFGEGVKREDLMISKSKK 60
Query: 303 DNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 482
++P DQIYV F ND+K+G KHIK Y+E M + V R ILV+Q LTPFA H QE++
Sbjct: 61 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSDNVPRAILVVQQNLTPFAKA--HLQELSP 118
Query: 483 RFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 662
+FH+EVFLEAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDPVARY+
Sbjct: 119 KFHLEVFLEAELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQITDPVARYY 178
Query: 663 GLRRGQVVKIIRPSETAGRYITYR 734
GL+RGQVVKIIRPSETAGRY+TYR
Sbjct: 179 GLKRGQVVKIIRPSETAGRYVTYR 202
>gb|PKA55370.1| hypothetical protein AXF42_Ash004009 [Apostasia shenzhenica]
Length = 204
Score = 267 bits (683), Expect = 1e-87
Identities = 132/200 (66%), Positives = 162/200 (81%)
Frame = +3
Query: 135 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDNPL 314
E++ RL+RIR+ VMEML+DRGYLV+D E+ M +F KFG+S++R+DL INKAKK+NP
Sbjct: 4 EQTSRLYRIRRTVMEMLRDRGYLVVDFEIRMSKMEFIHKFGESVKREDLIINKAKKNNPS 63
Query: 315 DQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 494
DQIYV F NDEK+G KHIK Y+E M E V R +LV+Q LTPFA + QE+ ++H+
Sbjct: 64 DQIYVFFPNDEKVGMKHIKKYVELMKSENVPRALLVVQQNLTPFARSYL--QELVPKYHL 121
Query: 495 EVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 674
EVF EAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+ DP+ARY+GL+R
Sbjct: 122 EVFQEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQVIDPIARYYGLKR 181
Query: 675 GQVVKIIRPSETAGRYITYR 734
GQVVKIIRPSETAGRY+TYR
Sbjct: 182 GQVVKIIRPSETAGRYVTYR 201
>ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera]
ref|XP_008801857.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera]
Length = 204
Score = 266 bits (681), Expect = 2e-87
Identities = 132/196 (67%), Positives = 163/196 (83%)
Frame = +3
Query: 147 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDNPLDQIY 326
RLFRIR+ VM+ML+DRGYLVLD+E++M+ QF +KFG+ ++RDDL INKAKK++P DQIY
Sbjct: 8 RLFRIRRTVMQMLRDRGYLVLDLEINMNKNQFLEKFGEGVKRDDLVINKAKKNDPADQIY 67
Query: 327 VIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEVFL 506
V F ND K+G K IK Y+ERM E V R ILV+Q LTPFA +++ EV +++ +EVF
Sbjct: 68 VFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFAKQSL--TEVAQKYLLEVFQ 125
Query: 507 EAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQVV 686
+AELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDPVARY+GL+RGQVV
Sbjct: 126 DAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPVARYYGLKRGQVV 185
Query: 687 KIIRPSETAGRYITYR 734
KIIRPSETAGRY+TYR
Sbjct: 186 KIIRPSETAGRYVTYR 201
>ref|XP_020532058.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X1
[Amborella trichopoda]
Length = 223
Score = 266 bits (680), Expect = 6e-87
Identities = 128/211 (60%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Frame = +3
Query: 105 RPRAGSMAA-SEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDL 281
R + G M+ +++ +LFRIR+ +M+ML+DRGYLV D E++M QF +KFGD +++DDL
Sbjct: 12 RRKEGEMSGMDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDL 71
Query: 282 TINKAKKDNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAI 461
INK ++NP +QIYV F ++K+G K +K Y ERM E VFR ILVLQ LTPFA + +
Sbjct: 72 VINKTMRNNPSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCV 131
Query: 462 HDQEVTRRFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLT 641
QE++ +FH+E+F E+ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+T
Sbjct: 132 --QEISAKFHLEIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIT 189
Query: 642 DPVARYHGLRRGQVVKIIRPSETAGRYITYR 734
DP+ARY+GL+RGQVVKIIRPSETAGRY+TYR
Sbjct: 190 DPIARYYGLKRGQVVKIIRPSETAGRYVTYR 220
>ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010928512.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
Length = 204
Score = 265 bits (678), Expect = 7e-87
Identities = 129/202 (63%), Positives = 167/202 (82%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ ++ RLFRIR+ VM+ML+DRGYLVLD+E++M+ +QF +KFG+ ++R+DL INKAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKRQFLEKFGEGVKREDLVINKAKKND 61
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
P DQIYV F ND K+G K IK Y+ERM E V R ILV+Q LTPFA +++ EV+ ++
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFARQSL--AEVSHKY 119
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
+EVF ++ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL
Sbjct: 120 MLEVFQDSELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYR 201
>ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815026.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815034.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 265 bits (676), Expect = 1e-86
Identities = 129/204 (63%), Positives = 165/204 (80%)
Frame = +3
Query: 123 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKK 302
M + EE RLFRIR+ VM+MLKDRGY V D E+ M +QFKDK+G+S++R+DL INKAK+
Sbjct: 2 MLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKDKYGESMKREDLVINKAKR 61
Query: 303 DNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 482
++ DQIY+ F ++ K+G K +K Y +RM E VFR ILV+Q LTPFA +I E++
Sbjct: 62 NDSSDQIYIFFPDEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSI--SEIST 119
Query: 483 RFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 662
+FH+EVF EAELL+NI H+LVPEHQVL++EEKK LLE Y +K+TQLPR+Q+TDPVARY+
Sbjct: 120 KFHLEVFQEAELLINIKDHVLVPEHQVLTNEEKKTLLERYTVKETQLPRMQVTDPVARYY 179
Query: 663 GLRRGQVVKIIRPSETAGRYITYR 734
GL+RGQVVKIIRPSETAGRY+TYR
Sbjct: 180 GLKRGQVVKIIRPSETAGRYVTYR 203
>ref|XP_006858910.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X2
[Amborella trichopoda]
ref|XP_020532059.1| DNA-directed RNA polymerases II and IV subunit 5A isoform X2
[Amborella trichopoda]
gb|ERN20377.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 265 bits (676), Expect = 1e-86
Identities = 125/200 (62%), Positives = 162/200 (81%)
Frame = +3
Query: 135 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDNPL 314
+++ +LFRIR+ +M+ML+DRGYLV D E++M QF +KFGD +++DDL INK ++NP
Sbjct: 6 DQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPS 65
Query: 315 DQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 494
+QIYV F ++K+G K +K Y ERM E VFR ILVLQ LTPFA + + QE++ +FH+
Sbjct: 66 EQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCV--QEISAKFHL 123
Query: 495 EVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 674
E+F E+ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+R
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 675 GQVVKIIRPSETAGRYITYR 734
GQVVKIIRPSETAGRY+TYR
Sbjct: 184 GQVVKIIRPSETAGRYVTYR 203
>ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010930085.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
ref|XP_010930086.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Elaeis guineensis]
Length = 204
Score = 264 bits (675), Expect = 2e-86
Identities = 129/202 (63%), Positives = 166/202 (82%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ ++ RLFRIR+ VM+ML+DRGYLVLD+E++M+ QF +KFG+ ++R+DL INKAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKND 61
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
P DQIYV F ND K+G K IK Y+ERM E V R ILV+Q LTPFA +++ EV++++
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSL--AEVSQKY 119
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
+EVF + ELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+GL
Sbjct: 120 MLEVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYR 201
>ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829463.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829464.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 264 bits (674), Expect = 3e-86
Identities = 128/202 (63%), Positives = 164/202 (81%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ EE RLFRIR+ VM+MLKDRGY V D E+ M +QFK+K+G+S++R+DL INK+K++N
Sbjct: 4 SEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKNKYGESMKREDLVINKSKRNN 63
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
DQIY+ F + K+G K +K Y +RM E VFR ILV+Q LTPFA +I+ E++ +F
Sbjct: 64 SSDQIYIFFPEEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSIN--EISTKF 121
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
H+EVF EAELL+NI H+LVPEHQVL++EEKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYR 203
>gb|OAY80387.1| DNA-directed RNA polymerases II and IV subunit 5A [Ananas comosus]
Length = 206
Score = 263 bits (671), Expect = 8e-86
Identities = 135/197 (68%), Positives = 160/197 (81%), Gaps = 1/197 (0%)
Frame = +3
Query: 147 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFG-DSIRRDDLTINKAKKDNPLDQI 323
RLFRIR+ VM+ML+DRGYLVLD E++M +F KFG DSIRRDDL INK+KK++P DQI
Sbjct: 9 RLFRIRRTVMQMLRDRGYLVLDFEINMSKAEFLHKFGPDSIRRDDLLINKSKKNDPADQI 68
Query: 324 YVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEVF 503
YV F NDEK+G KHIK Y+E M E V R +LVLQ LTPFA + QE++ +F +EVF
Sbjct: 69 YVFFPNDEKVGMKHIKKYVELMKAESVPRAMLVLQLNLTPFAKSYL--QEISPKFFLEVF 126
Query: 504 LEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQV 683
EAELLVNI H LVPEHQVL+ +EKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+RGQV
Sbjct: 127 QEAELLVNIKDHALVPEHQVLTSQEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQV 186
Query: 684 VKIIRPSETAGRYITYR 734
VKIIRPSETAGRY+TYR
Sbjct: 187 VKIIRPSETAGRYVTYR 203
>ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959554.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959555.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_023004795.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004796.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004797.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023513561.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
ref|XP_023513563.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
Length = 206
Score = 261 bits (668), Expect = 2e-85
Identities = 128/202 (63%), Positives = 161/202 (79%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
A EE RLFR+RK V++MLKDRGY V D E+ M +QFK+K+G+S++R+D+ INKAK+++
Sbjct: 4 AEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRND 63
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
DQIY+ F + K+G K +K Y RM E VFR ILV+Q LTPFA I E++ +F
Sbjct: 64 SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI--SEISTKF 121
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
H+EVF EAELLVNI H+LVPEHQ+LS+EEKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYR 203
>gb|AFK41303.1| unknown [Medicago truncatula]
Length = 206
Score = 261 bits (667), Expect = 3e-85
Identities = 129/202 (63%), Positives = 156/202 (77%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ EE RL+RIRK VM+MLKDR YLV D EL+M FKDK+G++++R+DL INK KKD
Sbjct: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDK 63
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
P DQIYV F + K+G K +K Y RM E V+R ILV Q LTPFA + E+ +F
Sbjct: 64 PSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCV--SEIASKF 121
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
H+EVF EAELLVNI H+LVPEHQ+L+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYR 203
>ref|XP_003610652.2| DNA-directed RNA polymerase II [Medicago truncatula]
gb|AES93610.2| DNA-directed RNA polymerase II [Medicago truncatula]
Length = 206
Score = 261 bits (667), Expect = 3e-85
Identities = 129/202 (63%), Positives = 156/202 (77%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ EE RL+RIRK VM+MLKDR YLV D EL+M FKDK+G++++R+DL INK KKD
Sbjct: 4 SEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDK 63
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
P DQIYV F + K+G K +K Y RM E V+R ILV Q LTPFA + E+ +F
Sbjct: 64 PSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCV--SEIASKF 121
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
H+EVF EAELLVNI H+LVPEHQ+L+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGL 181
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYR 203
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 261 bits (667), Expect = 3e-85
Identities = 129/200 (64%), Positives = 159/200 (79%)
Frame = +3
Query: 135 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDNPL 314
EE RL+RIRK VMEML+DR YLV D E++M QFK+K+G++++R+DL INK KKD P
Sbjct: 6 EEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPS 65
Query: 315 DQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 494
DQIYV F + K+G K +K Y+ RM E V+R ILV Q LTPFA ++ E++ +FH+
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSV--AEISSKFHL 123
Query: 495 EVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 674
EVF EAELLVNI H+LVPEHQVL+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL+R
Sbjct: 124 EVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 675 GQVVKIIRPSETAGRYITYR 734
GQVVKIIRPSETAGRY+TYR
Sbjct: 184 GQVVKIIRPSETAGRYVTYR 203
>ref|XP_020101892.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Ananas
comosus]
Length = 206
Score = 261 bits (666), Expect = 5e-85
Identities = 134/197 (68%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Frame = +3
Query: 147 RLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFG-DSIRRDDLTINKAKKDNPLDQI 323
RLFRIR+ VM+ML+DRGYLVLD E++M +F KFG D IRRDDL INK+KK++P DQI
Sbjct: 9 RLFRIRRTVMQMLRDRGYLVLDFEINMSKAEFLHKFGPDCIRRDDLLINKSKKNDPADQI 68
Query: 324 YVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHVEVF 503
YV F NDEK+G KHIK Y+E M E V R +LVLQ LTPFA + QE++ +F +EVF
Sbjct: 69 YVFFPNDEKVGMKHIKKYVELMKAESVPRAMLVLQLNLTPFAKSYL--QEISPKFFLEVF 126
Query: 504 LEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRRGQV 683
EAELLVNI H LVPEHQVL+ +EKK LLE Y LK+TQLPRIQ+TDP+ARY+GL+RGQV
Sbjct: 127 QEAELLVNIKDHALVPEHQVLTSQEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQV 186
Query: 684 VKIIRPSETAGRYITYR 734
VKIIRPSETAGRY+TYR
Sbjct: 187 VKIIRPSETAGRYVTYR 203
>dbj|GAV91188.1| RNA_pol_Rpb5_C domain-containing protein/RNA_pol_Rpb5_N
domain-containing protein [Cephalotus follicularis]
Length = 206
Score = 261 bits (666), Expect = 5e-85
Identities = 128/202 (63%), Positives = 163/202 (80%)
Frame = +3
Query: 129 ASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDN 308
+ EE RL+RIRK VM+MLKDR YLV D E+SM +QF KFG++++R+DL INK+K+++
Sbjct: 4 SEEEIRRLYRIRKTVMQMLKDRDYLVGDFEISMTREQFMQKFGENMKREDLLINKSKRND 63
Query: 309 PLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRF 488
DQI+V+F +++K+G K +K Y RM E VFR ILV+QH LTPFA I+ E+ +F
Sbjct: 64 SNDQIFVLFPDEQKVGVKTMKTYTNRMKAENVFRAILVVQHNLTPFARTCIN--EIASKF 121
Query: 489 HVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGL 668
H+EVF EAELLVNI H+LVPEHQVLS EEKK LLE Y +K+TQLPRIQ++DP+ARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLSSEEKKTLLERYTVKETQLPRIQVSDPIARYYGL 181
Query: 669 RRGQVVKIIRPSETAGRYITYR 734
+RGQVVKIIRPSETAGRY+TYR
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYR 203
>ref|XP_020214903.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cajanus
cajan]
gb|KYP68466.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
cajan]
Length = 206
Score = 261 bits (666), Expect = 5e-85
Identities = 131/200 (65%), Positives = 158/200 (79%)
Frame = +3
Query: 135 EESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKKDNPL 314
EE RL+RIRK VM+ML+DRGYLV D E++M FK K+G++++R+DL INK+KKDN
Sbjct: 6 EEIGRLYRIRKTVMQMLRDRGYLVGDFEINMSKHDFKSKYGENMKREDLVINKSKKDNSG 65
Query: 315 DQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTRRFHV 494
DQIYV F + K+G K +K Y RM E V+R ILVLQ LTPFA I E++ RFH+
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVLQTNLTPFARTCI--SEISSRFHL 123
Query: 495 EVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYHGLRR 674
EVF EAELLVNI H+LVPEHQVL+D EKK LLE Y +K+TQLPRIQ+TDPVARY+GL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 675 GQVVKIIRPSETAGRYITYR 734
GQVVKIIRPSETAGRY+TYR
Sbjct: 184 GQVVKIIRPSETAGRYVTYR 203
>gb|OVA00057.1| RNA polymerase [Macleaya cordata]
Length = 205
Score = 260 bits (665), Expect = 6e-85
Identities = 128/204 (62%), Positives = 160/204 (78%)
Frame = +3
Query: 123 MAASEESMRLFRIRKNVMEMLKDRGYLVLDVELSMDYKQFKDKFGDSIRRDDLTINKAKK 302
M++ EE +LFRIRK VM+ML+DRGYLV D E++ F KFGD+++RDDL INK+K+
Sbjct: 1 MSSDEEVTKLFRIRKTVMQMLRDRGYLVGDFEINETRAGFLSKFGDNVKRDDLVINKSKR 60
Query: 303 DNPLDQIYVIFTNDEKIGAKHIKVYLERMMQEKVFRTILVLQHKLTPFANRAIHDQEVTR 482
++ DQIYV F ++K+G K +K Y RM E VFR ILV+Q LTPFA + E++
Sbjct: 61 NDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCV--SEIST 118
Query: 483 RFHVEVFLEAELLVNINRHMLVPEHQVLSDEEKKALLEWYHLKDTQLPRIQLTDPVARYH 662
+FH+EVF EAELLVNI H+LVPEHQVL+ EEKK LLE Y LK+TQLPRIQ+TDP+ARY+
Sbjct: 119 KFHLEVFQEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYY 178
Query: 663 GLRRGQVVKIIRPSETAGRYITYR 734
GL+RGQVVKIIRPSETAGRY+TYR
Sbjct: 179 GLKRGQVVKIIRPSETAGRYVTYR 202