BLASTX nr result

ID: Ophiopogon26_contig00012556 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00012556
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273984.1| uncharacterized protein LOC109848748 [Aspara...    84   9e-16

>ref|XP_020273984.1| uncharacterized protein LOC109848748 [Asparagus officinalis]
 ref|XP_020273985.1| uncharacterized protein LOC109848748 [Asparagus officinalis]
 gb|ONK63524.1| uncharacterized protein A4U43_C07F16110 [Asparagus officinalis]
          Length = 629

 Score = 83.6 bits (205), Expect = 9e-16
 Identities = 63/160 (39%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
 Frame = +3

Query: 24  VAPPMEEEPDDFFVEIYTTSNHEERVINKI--------VEDGVDQSSEVSNEEHDV-MSF 176
           VAP   EE DDFFV +YT  + +    ++I        V+DG+D+ SE+ +EE DV MS 
Sbjct: 233 VAPSAAEEIDDFFVGVYTDRSEDGEDQDQIKETCEVASVDDGLDKRSELPDEEVDVAMSS 292

Query: 177 LEYVECDQRXXXXXXXKRPSLVPXXXXXXXXXXXXLGLLEKADD----GMVESESK---S 335
           LEYVE D+R                             L+ A+D    G V  ES+   S
Sbjct: 293 LEYVERDRR-----------------------------LDDAEDEEKSGFVSKESENEES 323

Query: 336 TFDFNWEEE-GSLFPDNITECSECPDDCSGLMPPQAESSI 452
           T DFNWE    +   DN+T+ SECPDD   LMPPQ ESS+
Sbjct: 324 TLDFNWEGRVDNPCSDNLTKSSECPDDRLDLMPPQIESSV 363


Top