BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00011909
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246188.1| probable mediator of RNA polymerase II trans...   113   1e-27
ref|XP_007205514.1| probable mediator of RNA polymerase II trans...    96   4e-21
gb|KZV53736.1| putative mediator of RNA polymerase II transcript...    94   4e-20
gb|OMO73441.1| hypothetical protein CCACVL1_17263 [Corchorus cap...    93   4e-20
gb|OMO85762.1| hypothetical protein COLO4_21459 [Corchorus olito...    93   4e-20
ref|XP_009369905.1| PREDICTED: probable mediator of RNA polymera...    93   5e-20
ref|XP_021297152.1| probable mediator of RNA polymerase II trans...    93   6e-20
ref|XP_017984558.1| PREDICTED: probable mediator of RNA polymera...    93   6e-20
ref|XP_021297150.1| probable mediator of RNA polymerase II trans...    93   6e-20
ref|XP_017984557.1| PREDICTED: probable mediator of RNA polymera...    93   6e-20
ref|XP_021801675.1| probable mediator of RNA polymerase II trans...    92   1e-19
ref|XP_008245606.1| PREDICTED: probable mediator of RNA polymera...    90   6e-19
ref|XP_022884511.1| probable mediator of RNA polymerase II trans...    91   6e-19
ref|XP_022884510.1| probable mediator of RNA polymerase II trans...    91   7e-19
ref|XP_022747334.1| probable mediator of RNA polymerase II trans...    90   8e-19
ref|XP_022747333.1| probable mediator of RNA polymerase II trans...    90   8e-19
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera...    90   1e-18
ref|XP_010680293.1| PREDICTED: probable mediator of RNA polymera...    90   1e-18
gb|PIN11451.1| hypothetical protein CDL12_15953 [Handroanthus im...    90   1e-18
gb|PIN26847.1| hypothetical protein CDL12_00391 [Handroanthus im...    89   2e-18

>ref|XP_020246188.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Asparagus officinalis]
 ref|XP_020246189.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Asparagus officinalis]
 gb|ONK57557.1| uncharacterized protein A4U43_C09F1720 [Asparagus officinalis]
          Length = 358

 Score =  113 bits (283), Expect = 1e-27
 Identities = 56/70 (80%), Positives = 64/70 (91%), Gaps = 2/70 (2%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEA--DERLINARKRLQANYQEAENAKKQRTIQVMDIHDIPK 174
           RP+HSTPSSA+PAKL EQK++  D+RL NARKRLQANYQEA+NAKKQRTIQVMDIH+IPK
Sbjct: 279 RPMHSTPSSASPAKLKEQKDSMLDDRLANARKRLQANYQEAQNAKKQRTIQVMDIHEIPK 338

Query: 175 PKNAFISRNK 204
            KN FI+RNK
Sbjct: 339 QKNTFIARNK 348


>ref|XP_007205514.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Prunus persica]
 ref|XP_020422046.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Prunus persica]
 gb|ONI02151.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
 gb|ONI02152.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
 gb|ONI02153.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
 gb|ONI02154.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
 gb|ONI02155.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
 gb|ONI02156.1| hypothetical protein PRUPE_6G180300 [Prunus persica]
          Length = 335

 Score = 95.9 bits (237), Expect = 4e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1   RPVHSTPSSATPA--KLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHD 165
           +P  STP SA+ A  +  EQKE++   +RL +ARKRLQANY+EAENAKKQRTIQVMDIHD
Sbjct: 250 KPAQSTPMSASAAQNRQREQKESNFDNDRLASARKRLQANYKEAENAKKQRTIQVMDIHD 309

Query: 166 IPKPKNAFISRNK 204
           IPKPKN+FI++NK
Sbjct: 310 IPKPKNSFIAKNK 322


>gb|KZV53736.1| putative mediator of RNA polymerase II transcription subunit 26c
           [Dorcoceras hygrometricum]
          Length = 366

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEA---DERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HS P S++      Q+E+   DERL +AR+RLQ NYQEAENAKKQRTIQVMDIH+IP
Sbjct: 287 RPPHSVPKSSSAPPNRAQRESLIDDERLNSARRRLQENYQEAENAKKQRTIQVMDIHEIP 346

Query: 172 KPKNAFISRNK 204
           KPKNAF ++NK
Sbjct: 347 KPKNAFFAKNK 357


>gb|OMO73441.1| hypothetical protein CCACVL1_17263 [Corchorus capsularis]
          Length = 336

 Score = 93.2 bits (230), Expect = 4e-20
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEADERLINARKRLQANYQEAENAKKQRTIQVMDIHDIPKPK 180
           RP HSTP      +  E     ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++PKPK
Sbjct: 260 RPTHSTPPQNVQREQKEGNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPK 319

Query: 181 NAFISRNK 204
           NAF ++NK
Sbjct: 320 NAFFAKNK 327


>gb|OMO85762.1| hypothetical protein COLO4_21459 [Corchorus olitorius]
          Length = 338

 Score = 93.2 bits (230), Expect = 4e-20
 Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      +  EQKE++   ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++P
Sbjct: 260 RPTHSTPPQNVQRQ-REQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELP 318

Query: 172 KPKNAFISRNK 204
           KPKNAF ++NK
Sbjct: 319 KPKNAFFAKNK 329


>ref|XP_009369905.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
 ref|XP_009369907.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
 ref|XP_009369908.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
 ref|XP_009369909.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
 ref|XP_009369910.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
 ref|XP_009369911.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Pyrus x bretschneideri]
          Length = 343

 Score = 93.2 bits (230), Expect = 5e-20
 Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTE--QKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHD 165
           +P  STP SA+  +  +  QKE+D   +RL +ARKRLQANY+EAENAKKQRTIQVMDIH+
Sbjct: 252 KPTQSTPVSASAPQNRQMGQKESDLDSDRLASARKRLQANYREAENAKKQRTIQVMDIHE 311

Query: 166 IPKPKNAFISRNK 204
           IPKPKN+FI+RNK
Sbjct: 312 IPKPKNSFIARNK 324


>ref|XP_021297152.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X2 [Herrania umbratica]
          Length = 337

 Score = 92.8 bits (229), Expect = 6e-20
 Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      +  EQKE++   ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++P
Sbjct: 259 RPTHSTPPQNVQRQ-REQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELP 317

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 318 KPKNAFFGKNK 328


>ref|XP_017984558.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X2 [Theobroma cacao]
 gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 337

 Score = 92.8 bits (229), Expect = 6e-20
 Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      +  EQKE++   ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++P
Sbjct: 259 RPTHSTPPQNVQRQ-REQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELP 317

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 318 KPKNAFFGKNK 328


>ref|XP_021297150.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X1 [Herrania umbratica]
          Length = 338

 Score = 92.8 bits (229), Expect = 6e-20
 Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      +  EQKE++   ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++P
Sbjct: 260 RPTHSTPPQNVQRQ-REQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELP 318

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 319 KPKNAFFGKNK 329


>ref|XP_017984557.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c isoform X1 [Theobroma cacao]
          Length = 338

 Score = 92.8 bits (229), Expect = 6e-20
 Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      +  EQKE++   ERL +ARKRLQANY+EAENAKKQRTIQVMDIH++P
Sbjct: 260 RPTHSTPPQNVQRQ-REQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELP 318

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 319 KPKNAFFGKNK 329


>ref|XP_021801675.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Prunus avium]
 ref|XP_021801676.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Prunus avium]
          Length = 335

 Score = 92.0 bits (227), Expect = 1e-19
 Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1   RPVHSTP--SSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHD 165
           +P  STP  +SA   +  EQKE++   +RL +ARKRLQANY+EAENAKKQRTIQVMDIH+
Sbjct: 250 KPAQSTPMFASAPQNRQREQKESNFDNDRLASARKRLQANYKEAENAKKQRTIQVMDIHE 309

Query: 166 IPKPKNAFISRNK 204
           IPKPKN+FI++NK
Sbjct: 310 IPKPKNSFIAKNK 322


>ref|XP_008245606.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Prunus mume]
 ref|XP_008245607.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Prunus mume]
          Length = 335

 Score = 90.1 bits (222), Expect = 6e-19
 Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1   RPVHSTPSSATPA--KLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHD 165
           +P  S P SA+    +  EQKE++   +RL +ARKRLQANY+EAENAKKQRTIQVMDIH+
Sbjct: 250 KPAQSIPMSASAPQNRQREQKESNFDNDRLASARKRLQANYKEAENAKKQRTIQVMDIHE 309

Query: 166 IPKPKNAFISRNK 204
           IPKPKN+FI++NK
Sbjct: 310 IPKPKNSFIAKNK 322


>ref|XP_022884511.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X2 [Olea europaea var. sylvestris]
          Length = 376

 Score = 90.5 bits (223), Expect = 6e-19
 Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEA---DERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP  S P SA+      Q+EA   DERL +AR+RLQ NYQEA+NAKKQRTIQ+MDIH+IP
Sbjct: 295 RPPQSVPKSASAPPSKPQREAAVDDERLNSARRRLQENYQEAQNAKKQRTIQMMDIHEIP 354

Query: 172 KPKNAFISRNK 204
           KP+N FI RNK
Sbjct: 355 KPRNGFIGRNK 365


>ref|XP_022884510.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X1 [Olea europaea var. sylvestris]
          Length = 386

 Score = 90.5 bits (223), Expect = 7e-19
 Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEA---DERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP  S P SA+      Q+EA   DERL +AR+RLQ NYQEA+NAKKQRTIQ+MDIH+IP
Sbjct: 305 RPPQSVPKSASAPPSKPQREAAVDDERLNSARRRLQENYQEAQNAKKQRTIQMMDIHEIP 364

Query: 172 KPKNAFISRNK 204
           KP+N FI RNK
Sbjct: 365 KPRNGFIGRNK 375


>ref|XP_022747334.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X2 [Durio zibethinus]
          Length = 335

 Score = 89.7 bits (221), Expect = 8e-19
 Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      K  EQKE++   ERL +ARKRLQ +Y+EAENAKKQRTIQVMDIH++P
Sbjct: 259 RPTHSTPQIVQ--KHREQKESNFDSERLASARKRLQESYKEAENAKKQRTIQVMDIHELP 316

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 317 KPKNAFFGKNK 327


>ref|XP_022747333.1| probable mediator of RNA polymerase II transcription subunit 26c
           isoform X1 [Durio zibethinus]
          Length = 336

 Score = 89.7 bits (221), Expect = 8e-19
 Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP HSTP      K  EQKE++   ERL +ARKRLQ +Y+EAENAKKQRTIQVMDIH++P
Sbjct: 260 RPTHSTPQIVQ--KHREQKESNFDSERLASARKRLQESYKEAENAKKQRTIQVMDIHELP 317

Query: 172 KPKNAFISRNK 204
           KPKNAF  +NK
Sbjct: 318 KPKNAFFGKNK 328


>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Nelumbo nucifera]
          Length = 349

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
 Frame = +1

Query: 1   RPVHSTPSSAT--PAKLTEQKEAD---ERLINARKRLQANYQEAENAKKQRTIQVMDIHD 165
           RP  S P+S +  P K  EQK++    ERL +AR+RL  NYQEA+NAKKQRTIQVMDIHD
Sbjct: 269 RPTQSVPASTSVPPNKQREQKDSSIDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHD 328

Query: 166 IPKPKNAFISRNK 204
           IPKPKN+F ++NK
Sbjct: 329 IPKPKNSFFAKNK 341


>ref|XP_010680293.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Beta vulgaris subsp. vulgaris]
 ref|XP_019105694.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c [Beta vulgaris subsp. vulgaris]
 gb|KMT09231.1| hypothetical protein BVRB_6g133320 [Beta vulgaris subsp. vulgaris]
          Length = 353

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 44/65 (67%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +1

Query: 13  STPSSATPAKLTEQKEAD-ERLINARKRLQANYQEAENAKKQRTIQVMDIHDIPKPKNAF 189
           ++P+SA P    +Q +AD +RL +ARKRLQ NYQEA+NAKKQRTIQVMDIH+IPKP+NAF
Sbjct: 283 ASPASAPPPNRQKQVQADADRLASARKRLQENYQEAQNAKKQRTIQVMDIHEIPKPRNAF 342

Query: 190 ISRNK 204
             RNK
Sbjct: 343 FGRNK 347


>gb|PIN11451.1| hypothetical protein CDL12_15953 [Handroanthus impetiginosus]
          Length = 397

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RPVHSTPSSATPAKLTEQKEA---DERLINARKRLQANYQEAENAKKQRTIQVMDIHDIP 171
           RP  S P S++      Q+E+   DERL +AR+RLQ NYQEA+NAKKQRTIQVMDIHDIP
Sbjct: 293 RPPQSAPKSSSAPPNRAQRESVIDDERLNSARRRLQENYQEAQNAKKQRTIQVMDIHDIP 352

Query: 172 KPKNAFISRNK 204
           KPKNAF ++N+
Sbjct: 353 KPKNAFFAKNR 363


>gb|PIN26847.1| hypothetical protein CDL12_00391 [Handroanthus impetiginosus]
          Length = 379

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 46/72 (63%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
 Frame = +1

Query: 1   RPVHSTPSSAT--PAKLTEQKEA--DERLINARKRLQANYQEAENAKKQRTIQVMDIHDI 168
           RP  S P SA+  PA   +++    DE+L +ARKRLQ NYQEA+NAKKQRTIQVMDIH+I
Sbjct: 299 RPPQSVPKSASAPPANRAQREPVLDDEKLNSARKRLQENYQEAQNAKKQRTIQVMDIHEI 358

Query: 169 PKPKNAFISRNK 204
           PKPKNAF+++NK
Sbjct: 359 PKPKNAFLAKNK 370