BLASTX nr result

ID: Ophiopogon26_contig00010744 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00010744
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248636.1| translocase of chloroplast 120, chloroplasti...    65   5e-12
ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, c...    60   2e-08
ref|XP_008788381.1| PREDICTED: translocase of chloroplast 120, c...    53   2e-06

>ref|XP_020248636.1| translocase of chloroplast 120, chloroplastic [Asparagus
           officinalis]
 gb|ONK57100.1| uncharacterized protein A4U43_C10F16620 [Asparagus officinalis]
          Length = 1215

 Score = 65.5 bits (158), Expect(2) = 5e-12
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
 Frame = -2

Query: 235 EAVETKLNGVEIDCVSEEGLGEPQDDGEQIIENGQKSLTEEKLGNGEHIGAVSDEK---- 68
           E   TKLNG+E D V +EG    +D GE+  ENG K LTE+KL NGE  G VSDE     
Sbjct: 205 EVFVTKLNGLEGDDVVKEGSFGSKDVGEKGFENGDKELTEDKLDNGECNGTVSDEGHNVL 264

Query: 67  ---VENGVSLVMTSDGMGVDCVTES 2
              +ENG+SLV +SD + V   ++S
Sbjct: 265 HEILENGLSLVASSDEICVGTASKS 289



 Score = 32.7 bits (73), Expect(2) = 5e-12
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
 Frame = -1

Query: 383 VNPDREDRNLADNLNAIEQKDVSVE-VDAQVGDQ---NPEGTGSTEK 255
           V  D+E++ + D+L A+EQ++V  +  D QV DQ   + EG GS E+
Sbjct: 157 VAEDQEEKEMVDDLCAVEQEEVIPDKTDVQVSDQSGEDREGVGSGEE 203


>ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Elaeis
           guineensis]
          Length = 1220

 Score = 60.5 bits (145), Expect(2) = 2e-08
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
 Frame = -2

Query: 256 KQVFDGGEAVETKLNGVEIDCVSEEGLGE-------PQDDGEQIIENGQKSLTEEKLGNG 98
           KQV D  EA+ T+LNGVE D V  E +G+       P +DGE I+E+ ++   +E   +G
Sbjct: 231 KQVEDRREAMPTELNGVEADDVISENVGDVVKVSSIPVNDGEVILEDSKEEFVDENSNDG 290

Query: 97  EHIGAVSD-------EKVENGVSLVMTSDGMGVDCVTES 2
           E    +SD       EK ENG SL +  D   V C T+S
Sbjct: 291 EPDEVISDGLHVAVYEKTENGGSLEVVFDKNSVSCGTDS 329



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 368 EDRNLA--DNLNAIEQKDVSVEVDAQVGDQNPEGTGSTE 258
           EDR  A    LN  E+ D S+  DAQV D + E  G+TE
Sbjct: 181 EDRKEAMPTELNGSEKFDESI--DAQVNDHSYEEQGATE 217


>ref|XP_008788381.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Phoenix
           dactylifera]
          Length = 1170

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
 Frame = -2

Query: 256 KQVFDGGEAVETKLNGVEIDCVSEEGLGE-------PQDDGEQIIENGQKSLTEEKLGNG 98
           KQV D  E + T+LNGVE D V  E +G        P +DGE I+E+ ++   +E   +G
Sbjct: 180 KQVEDRKETMPTELNGVEADGVISEKVGVGVEVSSIPVNDGELILEDSKEEFVDENSNDG 239

Query: 97  EHIGAVSD-------EKVENGVSLVMTSDGMGVDCVTES 2
           E    +SD       E  ENG SL    D   V C T+S
Sbjct: 240 ELDAVISDGPHLAVYETPENGGSLEKILDKNSVSCGTDS 278



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 308 VDAQVGDQNPEGTGSTE 258
           +D QV DQ+PE  G+TE
Sbjct: 150 IDVQVNDQSPEEKGATE 166


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