BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00010739
         (926 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024175889.1| DNA-directed RNA polymerase V subunit 5C-lik...    87   2e-16
ref|XP_022764792.1| DNA-directed RNA polymerase V subunit 5C-lik...    84   3e-15
ref|XP_022764791.1| DNA-directed RNA polymerase V subunit 5C-lik...    84   4e-15
ref|XP_021834559.1| DNA-directed RNA polymerase V subunit 5C [Pr...    81   2e-14
ref|XP_007221129.2| DNA-directed RNA polymerase V subunit 5C [Pr...    80   8e-14
ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV a...    78   3e-13
ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerase V sub...    78   3e-13
ref|XP_006420753.1| DNA-directed RNA polymerase V subunit 5C iso...    76   1e-12
ref|XP_010525487.1| PREDICTED: DNA-directed RNA polymerase V sub...    76   1e-12
ref|NP_181665.1| RNA polymerase II fifth largest subunit, D [Ara...    76   2e-12
ref|XP_010516317.1| PREDICTED: DNA-directed RNA polymerase V sub...    76   2e-12
gb|PIN18311.1| RNA polymerase, 25-kDa subunit (common to polymer...    76   2e-12
ref|XP_023766259.1| DNA-directed RNA polymerase V subunit 5C [La...    75   3e-12
ref|XP_021667988.1| DNA-directed RNA polymerase V subunit 5A [He...    75   4e-12
ref|XP_010508729.1| PREDICTED: DNA-directed RNA polymerases IV a...    75   4e-12
ref|XP_010517621.1| PREDICTED: DNA-directed RNA polymerases IV a...    74   6e-12
ref|XP_010427573.1| PREDICTED: DNA-directed RNA polymerase V sub...    74   6e-12
ref|XP_013708417.1| DNA-directed RNA polymerase V subunit 5A-lik...    74   7e-12
ref|XP_010508730.1| PREDICTED: DNA-directed RNA polymerases IV a...    74   7e-12
ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V sub...    74   8e-12

>ref|XP_024175889.1| DNA-directed RNA polymerase V subunit 5C-like [Rosa chinensis]
 gb|PRQ55197.1| putative DNA-directed RNA polymerase [Rosa chinensis]
          Length = 231

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 17/199 (8%)
 Frame = +2

Query: 119 GRNGEAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSDKPRQ-----------PDIDAL 265
           G + E++ YY + RT  +ML DR         +N+A SD  R            PD+D L
Sbjct: 30  GGSLESYRYYVSRRTVMEMLNDRG--------YNVADSDLTRSLTGFRTAFGQNPDLDRL 81

Query: 266 AIAANHKFEAAEKVAVAFRETGEMDDETTRAIHISLGKP--SRIVAVLHGEPAYYQQFRF 439
            I A+ +  +  K+ V F  T E+   + RAI+ +L     S ++ VL  +   Y +   
Sbjct: 82  TICASLRSNSKNKIMVIFCGTDEIRKASVRAIYANLLNKDISSLMLVLQSKMNSYAR--- 138

Query: 440 FSSRPEDPIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRT 607
                  P ++E FHI+EL VNV    L+ ++++ +AEE++H+ +    E  K+  +  T
Sbjct: 139 -KELENYPYKVETFHISELLVNVTNHVLQPKYEILSAEEKKHLLRKFKLEDKKLPLMLET 197

Query: 608 DWIARYFALREGEIVKGTY 664
           D  ARY+ L +G++VK TY
Sbjct: 198 DAFARYYGLEKGQVVKITY 216


>ref|XP_022764792.1| DNA-directed RNA polymerase V subunit 5C-like [Durio zibethinus]
          Length = 235

 Score = 84.0 bits (206), Expect = 3e-15
 Identities = 57/188 (30%), Positives = 104/188 (55%), Gaps = 9/188 (4%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAIAANHKFEAAE 301
           E+  +Y A +T+ +ML+DR     DS    S     SD   +P+++ L I+A+ +   ++
Sbjct: 38  ESRKFYLARKTAWEMLKDRGYKVADSELTRSLAEFRSDFGDKPELERLRISASLRSNPSK 97

Query: 302 KVAVAFRETGEMDDETTRAIHISLGKPSR--IVAVLHGEPAYYQQFRFFSSRPEDPIQIE 475
           K+ V F  T ++   T RA+H  + K S   ++ +L  +   + +    S     P ++E
Sbjct: 98  KILVVFMGTDDIRKATVRALHCQILKESLSGLILILQSKMNSFARKELESF----PFKVE 153

Query: 476 FFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFALREG 643
            F IA+L+VNV +  L  + ++ TAEE++ + K    E  ++ ++ +TD IARY+ L +G
Sbjct: 154 VFQIADLYVNVTKHHLMPKHEVLTAEEKQKLLKKYQLEDKQLPQMLQTDAIARYYGLEKG 213

Query: 644 EIVKGTYT 667
           ++VK TY+
Sbjct: 214 QVVKVTYS 221


>ref|XP_022764791.1| DNA-directed RNA polymerase V subunit 5C-like [Durio zibethinus]
          Length = 235

 Score = 83.6 bits (205), Expect = 4e-15
 Identities = 57/188 (30%), Positives = 104/188 (55%), Gaps = 9/188 (4%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAIAANHKFEAAE 301
           E+  +Y A +T+ +ML+DR     DS    S     SD   +P+++ L I+A+ +   ++
Sbjct: 38  ESRKFYLARKTAWEMLKDRGYKVADSELTRSLAEFRSDFGDKPELERLRISASLRSNPSK 97

Query: 302 KVAVAFRETGEMDDETTRAIHISLGKPSR--IVAVLHGEPAYYQQFRFFSSRPEDPIQIE 475
           K+ V F  T ++   T RA+H  + K S   ++ +L  +   + +    S     P ++E
Sbjct: 98  KILVVFMGTDDIRKATVRALHCQILKESLSGLILILQSKMNSFARKELESF----PFKVE 153

Query: 476 FFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFALREG 643
            F IA+L+VNV +  L  + ++ TAEE++ + K    E  ++ ++ RTD IA+Y+ L +G
Sbjct: 154 VFQIADLYVNVTKHYLMPKHEVLTAEEKQKLLKKYQLEDNQLPQMLRTDAIAQYYGLEKG 213

Query: 644 EIVKGTYT 667
           ++VK TY+
Sbjct: 214 QVVKVTYS 221


>ref|XP_021834559.1| DNA-directed RNA polymerase V subunit 5C [Prunus avium]
          Length = 230

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
 Frame = +2

Query: 110 SHVGRNG-EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAIAA 277
           SHV     E++ +Y + RT+ +ML DR     DS+   S     S     PD+  L+I  
Sbjct: 24  SHVVEGSMESYRFYLSRRTAMEMLSDRGCDVSDSDLSLSLTEFHSQFGPNPDLQQLSICV 83

Query: 278 NHKFEAAEKVAVAFRETGEMDDETTRAIHISLGKPS---RIVAVLHGEPAYYQQFRFFSS 448
           + +   ++K+ V F  T E+  +T   I+  L   +   R++ VL  +   Y +      
Sbjct: 84  SLRSTPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKANIHRLILVLQSKMNSYAR----KE 139

Query: 449 RPEDPIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWI 616
             + P ++E FHI +L VN+ +  LK + ++ TAEE+  + +    E  ++ ++  TD I
Sbjct: 140 LEKYPFKVETFHICDLLVNITKHALKPKLEILTAEEKNKLLRKYKLEDKQLPQMLETDGI 199

Query: 617 ARYFALREGEIVKGTY 664
           ARY+ L +G++VK TY
Sbjct: 200 ARYYGLEKGKVVKVTY 215


>ref|XP_007221129.2| DNA-directed RNA polymerase V subunit 5C [Prunus persica]
 gb|ONI20758.1| hypothetical protein PRUPE_2G032100 [Prunus persica]
          Length = 230

 Score = 79.7 bits (195), Expect = 8e-14
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
 Frame = +2

Query: 110 SHVGRNG-EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAIAA 277
           SHV     E++ +Y + RT+ +ML DR     DS+   S     S    +PD+  L I  
Sbjct: 24  SHVVEGSMESYRFYLSRRTAMEMLSDRGCDVSDSDLSLSLTEFHSQFGPKPDLQQLRICV 83

Query: 278 NHKFEAAEKVAVAFRETGEMDDETTRAIHISLGKPS---RIVAVLHGEPAYYQQFRFFSS 448
           + +   ++K+ V F  T E+  +T   I+  L       R++ VL  +   Y +      
Sbjct: 84  SLRSNPSKKIVVIFCGTEEIRKQTMCGIYAGLPNKENIHRLILVLQSKMNSYAR----KE 139

Query: 449 RPEDPIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFKEH-VKVAKLP---RTDWI 616
               P ++E FHI +L VN+ +  LK + ++ TAEE+  + +++ ++  +LP    TD I
Sbjct: 140 LEMYPFKVETFHICDLLVNITKHALKPKLEILTAEEKNKLLRKYKLEDKQLPLMLETDGI 199

Query: 617 ARYFALREGEIVKGTYT 667
           ARY+ L +G++VK TY+
Sbjct: 200 ARYYGLEKGKVVKVTYS 216


>ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
           [Nelumbo nucifera]
          Length = 223

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAIAANHKFEAAE 301
           E+  YY A RT  +ML DR     DS    S     S   ++PD++ + ++A+   + ++
Sbjct: 22  ESHRYYLARRTVLEMLRDRGYDIPDSEIDCSLQEFRSTYGQKPDLERIRVSASLLSDPSQ 81

Query: 302 KVAVAFRETGEMDDETTRAIHISL-GK-----PSRIVAVLHGE--PAYYQQFRFFSSRPE 457
           K+ V F  T +++    R I   + GK     P+R++ +L  E  P   ++   F     
Sbjct: 82  KILVVFCGTDKINVRIARGIRNQITGKEELSWPTRVILILQSEILPQARKEVEQF----- 136

Query: 458 DPIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARY 625
            P ++EFF I +L +N+ +  LK + ++ T EE+E +      E  ++ ++ ++D IARY
Sbjct: 137 -PCKVEFFQITDLLINITKHVLKPKHEILTPEEKEKILNKYSLEDKQMPRMLQSDAIARY 195

Query: 626 FALREGEIVKGTYT 667
           + L +G++VK  Y+
Sbjct: 196 YGLEKGQVVKVIYS 209


>ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C [Fragaria vesca
           subsp. vesca]
          Length = 228

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
 Frame = +2

Query: 104 MKSHVGRNG-EAFAYYSAWRTSAQMLEDRNIWEIDSN---SFNLAGSDKPRQPDIDALAI 271
           M SHV +   E++ YY + RT  +ML DR     DS    S     +   + PD+D ++ 
Sbjct: 21  MTSHVVQGSLESYRYYMSRRTVMEMLSDRGYNVPDSELTRSLTEFHTAFGQNPDLDRVSF 80

Query: 272 AANHKFEAAEKVAVAFRETGEMDDETTRAIHISLGKP--SRIVAVLHGEPAYYQQFRFFS 445
           + + +    +K+ V F  T E+     R I+  L     S ++ VL  +   + +    +
Sbjct: 81  SVSLRSNPKKKIMVLFCGTDEIRKANAREIYAKLMNKDISSLMLVLQSKINSFARKELET 140

Query: 446 SRPEDPIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFKEH-VKVAKLP---RTDW 613
                P ++E FHI+EL VNV +  L  ++++ TAEE++++ +++ ++  KLP    TD 
Sbjct: 141 Y----PYKVETFHISELLVNVTKHVLHPKYEILTAEEKKNLLRKYKLEDKKLPLMLETDA 196

Query: 614 IARYFALREGEIVKGTY 664
            ARY+ L +G++VK TY
Sbjct: 197 FARYYGLEKGQVVKITY 213


>ref|XP_006420753.1| DNA-directed RNA polymerase V subunit 5C isoform X1 [Citrus
           clementina]
 gb|ESR33993.1| hypothetical protein CICLE_v10005821mg [Citrus clementina]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
 Frame = +2

Query: 47  GDAGAGECKGFLLPALWKSMKSHVGRNG---EAFAYYSAWRTSAQMLEDRNIWEIDSN-- 211
           G  G GEC          +  SHV   G   E++ YY + RT  QML DR     +S   
Sbjct: 4   GGGGGGECI---------TRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSELT 54

Query: 212 ----SFNLAGSDKPRQPDIDALAIAANHKFEAAEKVAVAFRETGEMDDETTRAIHISLGK 379
                F     DK    D+++L +    +   ++K+ V +  T E+  +  R ++  +  
Sbjct: 55  RSLTEFRFTFGDKS---DLESLRLCLPLRSNPSKKMLVVYLGTEEVRTQAIRGLYGQILN 111

Query: 380 PSRIVAVLHGEPAYYQQFRFFSSRPED---PIQIEFFHIAELFVNVLRDTLKTEFKMTTA 550
                  LHG     Q      +R E    P ++E FHI +L VNV++  L+ + ++ +A
Sbjct: 112 KE----ALHGLILILQSNMNTFARKEVLKFPFKVEIFHITDLLVNVMKHILQPKHEVLSA 167

Query: 551 EEQEHVFKEH-VKVAKLPR---TDWIARYFALREGEIVKGTYTS 670
            E++ + K++ ++  +LPR   TD  ARY+ L++G++VK TY S
Sbjct: 168 GERDKLLKKYKIEGKQLPRMLETDAFARYYGLQKGQVVKFTYCS 211


>ref|XP_010525487.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Tarenaya
           hassleriana]
          Length = 226

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
 Frame = +2

Query: 17  LEGKEMEKSSGDAGAGECKGFLLPALWKSMKSHVGRNG-EAFAYYSAWRTSAQMLEDRNI 193
           +EGK  E SS  A A  C           +  +V     E+  YY A RT+ +ML DR  
Sbjct: 1   MEGKGKEGSSA-AAAASC-----------LSKYVDHGSVESHRYYLARRTAMEMLRDRG- 47

Query: 194 WEIDSNSFNLAGSDKPR----QPDIDALAIAANHKFEAAEKVAVAFRETGEMDDETTRAI 361
           +E+ ++  N++  +        PD+D L ++A H+ ++++++ V F  TG +     R+I
Sbjct: 48  YEVSADDINISLHEFRAIYGDHPDVDRLRVSAVHRSDSSKRITVVFSGTGMVKVNAIRSI 107

Query: 362 HISLGKPSRIVAVL-----HGEPAYYQQFRFFSSRPEDPIQIEFFHIAELFVNVLRDTLK 526
              +     +  ++     H      +    FS       ++E F I +L VNV    LK
Sbjct: 108 AADILSRESVTGMILILQSHITNQALKAVDLFS------FKVELFQITDLLVNVTGHVLK 161

Query: 527 TEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFALREGEIVKGTYT 667
              ++ T +E+E + K    +  ++ ++ + D I RY+ L +G++VK TY+
Sbjct: 162 PNHRVLTDKEKEALLKRFCIDEKQLPRISKKDAIVRYYGLEKGQVVKVTYS 212


>ref|NP_181665.1| RNA polymerase II fifth largest subunit, D [Arabidopsis thaliana]
 sp|Q9ZVB9.1|RPD5B_ARATH RecName: Full=DNA-directed RNA polymerases IV and V subunit 5B;
           AltName: Full=DNA-directed RNA polymerase 23kD subunit
 gb|AAC78539.1| putative DNA-directed RNA polymerase 23kD subunit [Arabidopsis
           thaliana]
 gb|AAL84932.1| At2g41340/F13H10.11 [Arabidopsis thaliana]
 gb|AEC09961.1| RNA polymerase II fifth largest subunit, D [Arabidopsis thaliana]
 gb|OAP10684.1| RPB5D [Arabidopsis thaliana]
          Length = 218

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSD----KPRQPDIDALAIAANHKFEAA 298
           E   YY A RT+ +ML DR  +++     NL+           PD+D L I+A H+F+++
Sbjct: 20  ECHKYYLARRTTMEMLRDRG-YDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSS 78

Query: 299 EKVAVAFRETGEMDDETTRAIHISLGKPSRIVAVL-----HGEPAYYQQFRFFSSRPEDP 463
           +K++V F  TG +     R I   +     I  ++     H      +    FS      
Sbjct: 79  KKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFS------ 132

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFA 631
            ++E F I +L VNV +  L+ + ++   +E+E + K    E  ++ +L   D I RY+ 
Sbjct: 133 FKVELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQLPRLSSKDPIVRYYG 192

Query: 632 LREGEIVKGTY 664
           L  G+++K TY
Sbjct: 193 LETGQVMKVTY 203


>ref|XP_010516317.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Camelina
           sativa]
          Length = 222

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSDKPR----QPDIDALAIAANHKFEAA 298
           E   YY A R + +ML DR  +E+     NL+  D       +PD+D L I+A H+F ++
Sbjct: 24  ETHRYYLARRNAFEMLRDRG-YEVSPEDINLSLHDFRTVYGDRPDLDRLHISAQHRFNSS 82

Query: 299 EKVAVAFRETGEMDDETTRAIH---ISLGKPSRIVAVL--HGEPAYYQQFRFFSSRPEDP 463
           +K+ + F   G +     R+I    +S G  + ++ VL  H      +    FS      
Sbjct: 83  KKIKIVFCGAGMVKVNAIRSIAADVLSQGTITGLIIVLQSHVTNQALKAIELFS------ 136

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFA 631
            ++E F I +L VN+ + TLK   ++   +E+  + K    E  ++ +L + D I RY+ 
Sbjct: 137 FKVEIFQITDLLVNITKHTLKLRHQVLDDKEKTALLKKFSIEEKQLPRLSKKDAIVRYYG 196

Query: 632 LREGEIVKGTY 664
           L +G++VK  Y
Sbjct: 197 LEKGQVVKVNY 207


>gb|PIN18311.1| RNA polymerase, 25-kDa subunit (common to polymerases I, II and
           III) [Handroanthus impetiginosus]
          Length = 226

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
 Frame = +2

Query: 29  EMEKSSGDAGAGECKGFLLPALWKSMKSHVGRNGEAFAYYSAWRTSAQMLEDRNI----W 196
           E  ++ GD   G C   LL     S++SH         YY A RT  +ML+DR       
Sbjct: 4   EALETDGDENLGNCLSSLLDD--GSIESH--------RYYLARRTMLEMLKDRGFAVPSC 53

Query: 197 EIDSNSFNLAGSDKPRQPDIDALAIAANHKFEAAEKVAVAFRETGEMDDETTRAIH---I 367
           EID  S     +   + PD+D L I+A HK + + KV V F     +     RAI    +
Sbjct: 54  EIDF-SLQEFRNKHGQMPDVDELRISALHKDDPSIKVLVLFCGPIIVKVNVIRAIATQIV 112

Query: 368 SLGKPSRIVAVLHGEPAYY--QQFRFFSSRPEDPIQIEFFHIAELFVNVLRDTLKTEFKM 541
           +    SR++ V+  +      +    FS       ++E F I +L VNV R  LK + ++
Sbjct: 113 NKDSLSRLILVVQNKITNQALKAVELFS------FKVEIFQITDLLVNVTRHELKPKHQV 166

Query: 542 TTAEEQEHVFKEH-VKVAKLPRT---DWIARYFALREGEIVKGTYT 667
            T +E+E + K++ +   +LPR    D IARY+ L +G++VK TY+
Sbjct: 167 LTDQEKESLLKKYSIDEKQLPRMSEKDAIARYYGLEKGQVVKVTYS 212


>ref|XP_023766259.1| DNA-directed RNA polymerase V subunit 5C [Lactuca sativa]
 gb|PLY83701.1| hypothetical protein LSAT_4X30101 [Lactuca sativa]
          Length = 232

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSN------SFNLAGSDKPRQPDIDALAIAANHKFE 292
           E+  YY A RT  +ML DR     D         F L   D   +PD D L I      +
Sbjct: 34  ESHRYYLARRTVLEMLRDRGCVIADYEFTRTLTEFRLVFGD---EPDPDHLRICVPLSSK 90

Query: 293 AAEKVAVAFRETGEMDDETTRAIHISLGKPS---RIVAVLHGEPAYYQQFRFFSSRPEDP 463
            ++K+ V F   G+++  T + + +++       RI+ VL G+   + +  F     E  
Sbjct: 91  PSKKILVIFCNPGDINKATAKHMLLNITNKDTLLRIILVLQGKMNIHARALF----NESE 146

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFKEH----VKVAKLPRTDWIARYFA 631
           +++EFF I ELFVN+ +     + ++ TAE++E + K++     ++  +   D IARY+ 
Sbjct: 147 VKVEFFPITELFVNITKHVAAPKHEILTAEQKEQMLKKYELADTQIPYMWVDDAIARYYG 206

Query: 632 LREGEIVKGTYTSH 673
           L + ++VK TY S+
Sbjct: 207 LEKKQVVKITYNSN 220


>ref|XP_021667988.1| DNA-directed RNA polymerase V subunit 5A [Hevea brasiliensis]
 ref|XP_021667989.1| DNA-directed RNA polymerase V subunit 5A [Hevea brasiliensis]
 ref|XP_021667991.1| DNA-directed RNA polymerase V subunit 5A [Hevea brasiliensis]
 ref|XP_021667992.1| DNA-directed RNA polymerase V subunit 5A [Hevea brasiliensis]
 ref|XP_021639215.1| DNA-directed RNA polymerase V subunit 5A-like [Hevea brasiliensis]
 ref|XP_021639216.1| DNA-directed RNA polymerase V subunit 5A-like [Hevea brasiliensis]
          Length = 237

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
 Frame = +2

Query: 56  GAGECKGFLLPALWKSMKSHVGRNG-EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGS 232
           GA     F + AL + + S V     E+  YY + RT  +ML DR  + + S+  +L+  
Sbjct: 13  GAERGGSFDMGALGRCLSSFVDEGSPESHRYYLSRRTVLEMLRDRG-YSVPSSEIDLSLQ 71

Query: 233 D----KPRQPDIDALAIAANHKFEAAEKVAVAFRETGEMDDETTRAIHISLGKPSRIVAV 400
           +      + PDID L  +A HK + ++++ V F  TG +   + R I   +     +  +
Sbjct: 72  EFRVIHGQNPDIDRLKFSATHKSDPSKRILVIFCGTGVLKVSSVRLIAAQIVNRDSLTGL 131

Query: 401 LHGEPAYYQQFRFFSSRPED--PIQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK 574
           +        Q    + +  D    ++E F I +L VN+ +  LK + ++ T  E+E + K
Sbjct: 132 I---LILQNQITNQALKAVDLFSFKVEMFQITDLLVNITKHLLKPKHEVLTDREKEKLLK 188

Query: 575 EH-VKVAKLPR---TDWIARYFALREGEIVKGTYT 667
           ++ ++  +LPR    D IA Y+ L +G++VK T+T
Sbjct: 189 KYSIEEKQLPRLLKKDAIAHYYGLEKGQVVKVTHT 223


>ref|XP_010508729.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
           X1 [Camelina sativa]
          Length = 218

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSD----KPRQPDIDALAIAANHKFEAA 298
           E   YY A RT+ +ML DR  +++     NL+           PD+D L I+A H+F+++
Sbjct: 20  ECHKYYLARRTTMEMLRDRG-YDVSDEDINLSLQQFRALYGELPDVDQLRISAKHRFDSS 78

Query: 299 EKVAVAFRETGEMDDETTRAIHISLGKPSRIVAVL-----HGEPAYYQQFRFFSSRPEDP 463
           +K+AV F  TG +     R I   +     I  ++     H      +    F+      
Sbjct: 79  KKIAVLFCGTGTVKVNEMRVIAADVLNRESITGLILVLQGHITNQALKAVELFT------ 132

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFA 631
            ++E F I +L VNV +  L+   ++   +E+E + K    E  ++ +L   D I RY+ 
Sbjct: 133 FKVELFEITDLLVNVTKHVLRPRHQVLNDDEKESLLKKYSLEEKQLPRLSSKDPIVRYYG 192

Query: 632 LREGEIVKGTY 664
           L  G+++K TY
Sbjct: 193 LETGQVMKITY 203


>ref|XP_010517621.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
           isoform X1 [Camelina sativa]
          Length = 218

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSD----KPRQPDIDALAIAANHKFEAA 298
           E   YY A RT+ +ML DR  +++     NL+           PD+D L I+A H F+++
Sbjct: 20  ECHKYYLARRTTMEMLRDRG-YDVSDEDINLSFQQFRALYGELPDVDQLRISAKHHFDSS 78

Query: 299 EKVAVAFRETGEMDDETTRAIH---ISLGKPSRIVAVLHGEPAYYQQFRFFSSRPEDPIQ 469
           +K+AV F  TG +     R I    ++    + ++ VL G    +   +   +      +
Sbjct: 79  KKIAVLFCGTGTVKVNEMRVIAADVLNRESITGLILVLQG----HITIQALKAVELFTFK 134

Query: 470 IEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFALR 637
           +E F I +L VNV +  L+   ++   +E+E + K    E  ++ +L  TD   RY+ L 
Sbjct: 135 VELFEITDLLVNVTKHVLRRRHQVLNDDEKESLLKKYSLEEKQLPRLSSTDPSVRYYGLE 194

Query: 638 EGEIVKGTY 664
            G+++K TY
Sbjct: 195 TGQVMKITY 203


>ref|XP_010427573.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Camelina
           sativa]
          Length = 222

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSDKPR----QPDIDALAIAANHKFEAA 298
           E   YY A R + +ML DR  +E+ +   NL+  D       +PD+D L I+A H+ +++
Sbjct: 24  ETHRYYLARRNAFEMLRDRG-YEVAAEDINLSLHDFRTVYGDRPDVDRLHISAQHRSDSS 82

Query: 299 EKVAVAFRETGEMDDETTRAIH---ISLGKPSRIVAVL--HGEPAYYQQFRFFSSRPEDP 463
           +K+ + F   G +     R+I    +S G  + ++ VL  H      +    FS      
Sbjct: 83  KKIKIVFCGAGMVKVNAIRSIAADVLSQGTITGLIIVLQSHVTNQALKAIELFS------ 136

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFA 631
            ++E F I +L VNV + TLK   ++   +E+  + K    E  ++ +L + D I RY+ 
Sbjct: 137 FKVETFQITDLLVNVTKHTLKLRHQVLDDKEKTELLKKFSIEEKQLPRLSKKDAIVRYYG 196

Query: 632 LREGEIVKGTY 664
           L +G++VK  Y
Sbjct: 197 LEKGQVVKVNY 207


>ref|XP_013708417.1| DNA-directed RNA polymerase V subunit 5A-like [Brassica napus]
          Length = 230

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSD----KPRQPDIDALAIAANHKFEAA 298
           E+  YY A R + +ML DR  +E+     NL+  D       +PD+D L I+A+H+ +++
Sbjct: 32  ESHRYYLARRNALEMLRDRG-YEVSLEDINLSLQDFRTVYGERPDVDRLRISAHHRSDSS 90

Query: 299 EKVAVAFRETGEMDDETTRAIH---ISLGKPSRIVAVLHGE--PAYYQQFRFFSSRPEDP 463
            KV V F  TG++   T R++    +S    + ++ VL  +      +    F+      
Sbjct: 91  NKVKVVFFGTGKVKVNTIRSVAAEILSQETITGLILVLQNQVTDKALKAIELFT------ 144

Query: 464 IQIEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFKE-HVKVAKLPR---TDWIARYFA 631
            ++E F I +L VN+ +  L    ++ T  E++ + K+ +++  +LPR    D + RY+ 
Sbjct: 145 FKVEIFQITDLLVNLTKHVLSLRHRVLTDGEKKALLKQFNIEEKQLPRISKKDAVVRYYG 204

Query: 632 LREGEIVKGTY 664
           L +G+IVK +Y
Sbjct: 205 LEKGQIVKVSY 215


>ref|XP_010508730.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
           X2 [Camelina sativa]
          Length = 213

 Score = 73.9 bits (180), Expect = 7e-12
 Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLAGSD----KPRQPDIDALAIAANHKFEAA 298
           E   YY A RT+ +ML DR  +++     NL+           PD+D L I+A H+F+++
Sbjct: 20  ECHKYYLARRTTMEMLRDRG-YDVSDEDINLSLQQFRALYGELPDVDQLRISAKHRFDSS 78

Query: 299 EKVAVAFRETGEMDDETTRAIH---ISLGKPSRIVAVLHGEPAYYQQFRFFSSRPEDPIQ 469
           +K+AV F  TG +     R I    ++    + ++ VL G           +++    ++
Sbjct: 79  KKIAVLFCGTGTVKVNEMRVIAADVLNRESITGLILVLQGH---------ITNQALKAVE 129

Query: 470 IEFFHIAELFVNVLRDTLKTEFKMTTAEEQEHVFK----EHVKVAKLPRTDWIARYFALR 637
           +  F I +L VNV +  L+   ++   +E+E + K    E  ++ +L   D I RY+ L 
Sbjct: 130 LFTFKITDLLVNVTKHVLRPRHQVLNDDEKESLLKKYSLEEKQLPRLSSKDPIVRYYGLE 189

Query: 638 EGEIVKGTY 664
            G+++K TY
Sbjct: 190 TGQVMKITY 198


>ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
           [Elaeis guineensis]
          Length = 217

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
 Frame = +2

Query: 131 EAFAYYSAWRTSAQMLEDRNIWEIDSNSFNLA----GSDKPRQPDIDALAIAANHKFEAA 298
           E+  Y+ A RT  +ML DR  + I +   NL      S+    PD + L+++ +   +  
Sbjct: 19  ESCRYFLARRTVLEMLRDRG-YPIPAEQINLTLDEFRSEYGESPDRNRLSLSYSLSSQPN 77

Query: 299 EKVAVAFRETGEMDDETTRAIHISLGKPSRIVAVLHGEPAYYQQFRFFSSRPEDPIQIEF 478
            KV V F  T  +     R I++ +GK +    +L  +     + R  + +     ++E 
Sbjct: 78  NKVHVIFCGTEPVKLAVIREIYMQVGKENLYGLILILQSKMTSKARE-AIKDIFKFKVET 136

Query: 479 FHIAELFVNVLRDTLKTEFKMTTAEEQEHVFKEH-VKVAKLPR---TDWIARYFALREGE 646
           FHI EL VN+ +  LK    + T EE++ + K++ V+ ++LPR   TD IARY+ L++G+
Sbjct: 137 FHITELLVNITKHVLKPRHDVLTEEEKQKLLKKYNVEDSQLPRMLETDAIARYYGLQKGQ 196

Query: 647 IVKGTY 664
           +VK TY
Sbjct: 197 VVKVTY 202