BLASTX nr result
ID: Ophiopogon26_contig00009978
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00009978
(530 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020083063.1| pentatricopeptide repeat-containing protein ... 73 6e-15
gb|OAY68833.1| Pentatricopeptide repeat-containing protein [Anan... 73 6e-15
ref|XP_010936694.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-13
ref|XP_008784899.1| PREDICTED: pentatricopeptide repeat-containi... 73 2e-13
ref|XP_020678152.1| pentatricopeptide repeat-containing protein ... 71 3e-13
ref|XP_009392295.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-13
gb|PKU86954.1| Pentatricopeptide repeat-containing protein [Dend... 71 8e-13
ref|XP_020678153.1| pentatricopeptide repeat-containing protein ... 71 8e-13
ref|XP_010060957.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-10
ref|XP_020594636.1| pentatricopeptide repeat-containing protein ... 62 4e-10
ref|XP_015884644.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-10
ref|XP_010257719.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ... 60 6e-10
ref|XP_021644222.1| pentatricopeptide repeat-containing protein ... 60 6e-10
gb|OVA19078.1| Pentatricopeptide repeat [Macleaya cordata] 63 7e-10
ref|XP_021644223.1| pentatricopeptide repeat-containing protein ... 60 2e-09
ref|XP_023883948.1| protein NUCLEAR FUSION DEFECTIVE 5, mitochon... 57 3e-09
ref|XP_018821637.1| PREDICTED: putative pentatricopeptide repeat... 60 6e-09
ref|XP_021901290.1| pentatricopeptide repeat-containing protein ... 60 2e-08
ref|XP_021612787.1| protein NUCLEAR FUSION DEFECTIVE 5, mitochon... 59 4e-08
gb|PKA53886.1| Pentatricopeptide repeat-containing protein [Apos... 57 4e-08
>ref|XP_020083063.1| pentatricopeptide repeat-containing protein At1g64100 [Ananas
comosus]
Length = 705
Score = 72.8 bits (177), Expect(2) = 6e-15
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+ LCDMYAR EEK RKS+KILEG K+ L+ADQFE ++SGLLAGG V +A
Sbjct: 616 IGLCDMYARAKQEEKLRKSMKILEGRKQMLKADQFERVISGLLAGGFVQDA 666
Score = 35.4 bits (80), Expect(2) = 6e-15
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIPPATR*G 249
GF+PSESVRVA+MA+QS R P + + G
Sbjct: 677 GFAPSESVRVALMAAQSIPRPRPASRKRG 705
>gb|OAY68833.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 704
Score = 72.8 bits (177), Expect(2) = 6e-15
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+ LCDMYAR EEK RKS+KILEG K+ L+ADQFE ++SGLLAGG V +A
Sbjct: 615 IGLCDMYARAKQEEKLRKSMKILEGRKQMLKADQFERVISGLLAGGFVQDA 665
Score = 35.4 bits (80), Expect(2) = 6e-15
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIPPATR*G 249
GF+PSESVRVA+MA+QS R P + + G
Sbjct: 676 GFAPSESVRVALMAAQSIPRPRPASRKWG 704
>ref|XP_010936694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920
[Elaeis guineensis]
Length = 705
Score = 73.6 bits (179), Expect(2) = 2e-13
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R EKARKSLKILE K+ LRADQFE IVSGLLAGG+V +A
Sbjct: 615 VSLCDMYSRAQQGEKARKSLKILEARKQLLRADQFERIVSGLLAGGLVEDA 665
Score = 29.6 bits (65), Expect(2) = 2e-13
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFAR 276
GFSPSE RVA+MA++S R
Sbjct: 676 GFSPSEPTRVALMAAKSIPR 695
>ref|XP_008784899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Phoenix dactylifera]
Length = 705
Score = 72.8 bits (177), Expect(2) = 2e-13
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R EK RKSLKILE KK LRADQFE IVSGLLAGG V +A
Sbjct: 615 VSLCDMYSRAQQGEKVRKSLKILEARKKLLRADQFERIVSGLLAGGFVEDA 665
Score = 30.4 bits (67), Expect(2) = 2e-13
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIPPATR*GG 246
GF+PSE RVA+MA+QS R ++R GG
Sbjct: 676 GFTPSEPTRVALMAAQSIPRQ--KSSRRGG 703
>ref|XP_020678152.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Dendrobium catenatum]
Length = 698
Score = 70.9 bits (172), Expect(2) = 3e-13
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLC+MY+R GNE+KAR+SLKILEG K ++ DQFE +VSGL+AG ++ +A
Sbjct: 605 VSLCEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDA 655
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+ SESV+V +MA+QS RH P
Sbjct: 666 GFTLSESVKVGLMAAQSIPRHEP 688
>ref|XP_009392295.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Musa acuminata subsp. malaccensis]
Length = 710
Score = 68.9 bits (167), Expect(2) = 8e-13
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R EKARKSLKILE K LRADQ E I+SGLLAGG++ +A
Sbjct: 618 VSLCDMYSRAHQLEKARKSLKILEARSKLLRADQLERIISGLLAGGLLEDA 668
Score = 32.0 bits (71), Expect(2) = 8e-13
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 341 SLGFSPSESVRVAIMASQSFARHIPPATR*G 249
S G +PSE +RVA++A+QS R P R G
Sbjct: 677 SQGLAPSEPIRVALLAAQSIRRQKSPTRRGG 707
>gb|PKU86954.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 698
Score = 70.9 bits (172), Expect(2) = 8e-13
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLC+MY+R GNE+KAR+SLKILEG K ++ DQFE +VSGL+AG ++ +A
Sbjct: 605 VSLCEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDA 655
Score = 30.0 bits (66), Expect(2) = 8e-13
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARH 273
GF+ SESV+V +MA+QS RH
Sbjct: 666 GFTLSESVKVGLMAAQSIPRH 686
>ref|XP_020678153.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Dendrobium catenatum]
ref|XP_020678154.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X3 [Dendrobium catenatum]
Length = 698
Score = 70.9 bits (172), Expect(2) = 8e-13
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLC+MY+R GNE+KAR+SLKILEG K ++ DQFE +VSGL+AG ++ +A
Sbjct: 605 VSLCEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDA 655
Score = 30.0 bits (66), Expect(2) = 8e-13
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARH 273
GF+ SESV+V +MA+QS RH
Sbjct: 666 GFTLSESVKVGLMAAQSIPRH 686
>ref|XP_010060957.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32630
[Eucalyptus grandis]
gb|KCW67856.1| hypothetical protein EUGRSUZ_F01577 [Eucalyptus grandis]
Length = 717
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+SLCDMY+R G E+KA ++L +E K+ L D FE +V+GL+AGG + EA
Sbjct: 631 LSLCDMYSRAGMEKKALQTLGAIEAKKEQLGLDDFEKVVNGLVAGGFIQEA 681
Score = 35.0 bits (79), Expect(2) = 4e-10
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+PSES++VA+MASQ+F R P
Sbjct: 692 GFAPSESLKVALMASQAFGRKRP 714
>ref|XP_020594636.1| pentatricopeptide repeat-containing protein At1g19525-like, partial
[Phalaenopsis equestris]
Length = 293
Score = 61.6 bits (148), Expect(2) = 4e-10
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R G E+ AR+SLKILEG K + DQFE ++ GL+A ++ +A
Sbjct: 200 VSLCDMYSRAGKEQNARQSLKILEGRKDVMTGDQFERVMGGLVAARLLNDA 250
Score = 30.0 bits (66), Expect(2) = 4e-10
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARH 273
GF+ SESV+V +MA+QS RH
Sbjct: 261 GFTLSESVKVGLMAAQSIPRH 281
>ref|XP_015884644.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Ziziphus jujuba]
ref|XP_015884645.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Ziziphus jujuba]
Length = 727
Score = 61.6 bits (148), Expect(2) = 6e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+SLCDMYAR G E+KA +SL +LE K+ LR+D+FE I+ GL+ GG V A
Sbjct: 641 ISLCDMYARAGIEKKALQSLGVLEAKKEQLRSDEFERIIHGLIDGGFVQHA 691
Score = 29.6 bits (65), Expect(2) = 6e-10
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+ SE ++VA+MASQ+F R P
Sbjct: 702 GFTASEPLKVALMASQAFGRGRP 724
>ref|XP_010257719.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial
[Nelumbo nucifera]
Length = 720
Score = 60.5 bits (145), Expect(2) = 6e-10
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R+G E+KA ++L ++E K+ LR D FE I++GL+AGG V +A
Sbjct: 634 VSLCDMYSRLGIEKKALEALGVVESKKELLRKDDFERIINGLIAGGFVQDA 684
Score = 30.8 bits (68), Expect(2) = 6e-10
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+ SE ++VA+MASQ+F+R P
Sbjct: 695 GFATSEPLKVALMASQTFSRQRP 717
>ref|XP_021644222.1| pentatricopeptide repeat-containing protein At2g32630-like isoform
X1 [Hevea brasiliensis]
Length = 719
Score = 60.5 bits (145), Expect(2) = 6e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+SLCDMYAR G E+KA ++L +LE K+ L +D FE +++GL+AGG V +A
Sbjct: 633 ISLCDMYARAGIEKKALQALGVLESKKEQLGSDDFERVINGLIAGGFVQDA 683
Score = 30.8 bits (68), Expect(2) = 6e-10
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHI 270
GF+ SE ++VA+MASQ+F+R I
Sbjct: 694 GFTASEHLKVALMASQAFSRRI 715
>gb|OVA19078.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 737
Score = 63.2 bits (152), Expect(2) = 7e-10
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R GNE+KA ++L I+EG K+ L AD+FE I+ GL+ GG+ +A
Sbjct: 651 VSLCDMYSRAGNEKKALQALGIVEGKKEVLGADEFERIIHGLIVGGLTQDA 701
Score = 27.7 bits (60), Expect(2) = 7e-10
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIPPA 261
GFS SE +++++MASQ+ R P A
Sbjct: 712 GFSASEPLKMSLMASQAIRRQRPTA 736
>ref|XP_021644223.1| pentatricopeptide repeat-containing protein At2g32630-like isoform
X2 [Hevea brasiliensis]
Length = 714
Score = 60.5 bits (145), Expect(2) = 2e-09
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+SLCDMYAR G E+KA ++L +LE K+ L +D FE +++GL+AGG V +A
Sbjct: 633 ISLCDMYARAGIEKKALQALGVLESKKEQLGSDDFERVINGLIAGGFVQDA 683
Score = 29.3 bits (64), Expect(2) = 2e-09
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFAR 276
GF+ SE ++VA+MASQ+F+R
Sbjct: 694 GFTASEHLKVALMASQAFSR 713
>ref|XP_023883948.1| protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial [Quercus suber]
gb|POE71056.1| pentatricopeptide repeat-containing protein [Quercus suber]
Length = 727
Score = 57.0 bits (136), Expect(2) = 3e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
+SLCDMY+R G E+KA ++L LE K+ L D FE I+ GLLAGG V +A
Sbjct: 641 ISLCDMYSRAGVEKKALQALGALEAKKEQLGPDDFERIIYGLLAGGFVQDA 691
Score = 31.6 bits (70), Expect(2) = 3e-09
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+ SE ++VA+MASQSF+R P
Sbjct: 702 GFAASEPLKVALMASQSFSRKRP 724
>ref|XP_018821637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Juglans regia]
ref|XP_018821639.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Juglans regia]
ref|XP_018821640.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Juglans regia]
Length = 725
Score = 60.1 bits (144), Expect(2) = 6e-09
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMY+R G E+KA ++L +LE K+ LR+ +FE I++GL+AGG V +A
Sbjct: 639 VSLCDMYSRAGVEKKALQALGVLEAKKEQLRSFEFERIINGLIAGGFVQDA 689
Score = 27.7 bits (60), Expect(2) = 6e-09
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQSFARHIP 267
GF+ SE ++VA+MASQ+ R P
Sbjct: 700 GFAASEPLKVAMMASQALGRQRP 722
>ref|XP_021901290.1| pentatricopeptide repeat-containing protein At2g35130 [Carica
papaya]
Length = 708
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLC+MY+R G E+KARK+L +LE K+ L +++FE I+ GL AGG + +A
Sbjct: 622 VSLCEMYSRAGFEKKARKALGVLEAKKEQLASNEFERIIDGLTAGGFIKDA 672
Score = 25.8 bits (55), Expect(2) = 2e-08
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 341 SLGFSPSESVRVAIMASQSFARHIP 267
S GF+ S+ ++V ++AS+SF R P
Sbjct: 681 SQGFAISDKLKVKLIASESFGRKRP 705
>ref|XP_021612787.1| protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial [Manihot
esculenta]
ref|XP_021612788.1| protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial [Manihot
esculenta]
gb|OAY50712.1| hypothetical protein MANES_05G158200 [Manihot esculenta]
gb|OAY50713.1| hypothetical protein MANES_05G158200 [Manihot esculenta]
Length = 721
Score = 58.9 bits (141), Expect(2) = 4e-08
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
VSLCDMYAR G E+KA ++L +LE K+ L +D FE +++GL+AG V +A
Sbjct: 639 VSLCDMYARAGMEKKALQALGVLESKKEQLGSDDFERVINGLIAGSFVQDA 689
Score = 26.2 bits (56), Expect(2) = 4e-08
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -1
Query: 341 SLGFSPSESVRVAIMASQSF 282
S GF+ SE ++VA+MAS++F
Sbjct: 698 SQGFTASEHLKVALMASRAF 717
>gb|PKA53886.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 716
Score = 56.6 bits (135), Expect(2) = 4e-08
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -3
Query: 528 VSLCDMYARVGNEEKARKSLKILEGGKKSLRADQFETIVSGLLAGGMVGEA 376
V L DMY+R GN++KA + KIL+G K L+ADQFE IV GLL G + +A
Sbjct: 615 VGLWDMYSRAGNKKKAHEFFKILQGRKNLLKADQFERIVRGLLDRGFLNDA 665
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = -1
Query: 335 GFSPSESVRVAIMASQS 285
GF+PSES+++ +MA+QS
Sbjct: 676 GFAPSESIKITLMAAQS 692