BLASTX nr result
ID: Ophiopogon26_contig00009943
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00009943
(575 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX86787.1| 40S ribosomal protein s4-like [Trifolium pratense] 56 4e-07
dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyru... 56 5e-07
gb|KZV06739.1| hypothetical protein F511_45779, partial [Dorcoce... 55 8e-07
ref|XP_013718824.1| 40S ribosomal protein S4-1-like [Brassica na... 58 9e-07
gb|PNX87522.1| 40S ribosomal protein s4-like, partial [Trifolium... 56 1e-06
emb|CDP12458.1| unnamed protein product [Coffea canephora] 54 2e-06
gb|ACL51789.1| putative ribosomal protein S4, partial [Picea abi... 54 2e-06
gb|ACJ70374.1| putative ribosomal protein S4, partial [Pinus syl... 54 2e-06
ref|WP_073994925.1| hypothetical protein [Enterococcus faecium] 54 3e-06
ref|WP_080490016.1| hypothetical protein [Enterococcus faecalis] 54 4e-06
dbj|GAV73601.1| KOW domain-containing protein/Ribosomal_S4e doma... 56 4e-06
ref|XP_018500446.1| PREDICTED: 40S ribosomal protein S4 [Pyrus x... 55 5e-06
ref|XP_021822144.1| 40S ribosomal protein S4 [Prunus avium] 56 5e-06
gb|KMZ75979.1| 40S ribosomal protein S4-2 [Zostera marina] 56 5e-06
ref|XP_007211867.1| 40S ribosomal protein S4 [Prunus persica] >g... 56 5e-06
ref|XP_020698236.1| 40S ribosomal protein S4-3-like [Dendrobium ... 56 5e-06
ref|XP_021679864.1| 40S ribosomal protein S4 [Hevea brasiliensis] 55 5e-06
gb|PHT73055.1| 40S ribosomal protein S4 [Capsicum annuum] 53 5e-06
gb|KJB38001.1| hypothetical protein B456_006G231800 [Gossypium r... 55 6e-06
dbj|GAU13922.1| hypothetical protein TSUD_262490, partial [Trifo... 56 6e-06
>gb|PNX86787.1| 40S ribosomal protein s4-like [Trifolium pratense]
Length = 83
Score = 55.8 bits (133), Expect = 4e-07
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K +E I D S ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 19 KHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 65
>dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
culta]
Length = 90
Score = 55.8 bits (133), Expect = 5e-07
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D S ++ LGNVFTIGKG KPW+SLPKGKGIKL
Sbjct: 26 KHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKGKGIKL 72
>gb|KZV06739.1| hypothetical protein F511_45779, partial [Dorcoceras hygrometricum]
Length = 84
Score = 55.1 bits (131), Expect = 8e-07
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 20 KHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 66
>ref|XP_013718824.1| 40S ribosomal protein S4-1-like [Brassica napus]
Length = 262
Score = 58.2 bits (139), Expect = 9e-07
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + C++ LGNVFT+GKG KPWVSLPKGKGIKL
Sbjct: 200 KHKGSFETIHIQDSTGHECATRLGNVFTLGKGTKPWVSLPKGKGIKL 246
>gb|PNX87522.1| 40S ribosomal protein s4-like, partial [Trifolium pratense]
gb|PNX89229.1| 40S ribosomal protein s4-like, partial [Trifolium pratense]
Length = 144
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K +E I D S ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 80 KHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 126
>emb|CDP12458.1| unnamed protein product [Coffea canephora]
Length = 83
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + ++ LGNVF IGKGAKPWVSLPKGKGIKL
Sbjct: 19 KHKGSFETIHVQDATGHKFATRLGNVFIIGKGAKPWVSLPKGKGIKL 65
>gb|ACL51789.1| putative ribosomal protein S4, partial [Picea abies]
gb|ACL51790.1| putative ribosomal protein S4, partial [Picea glauca]
Length = 71
Score = 53.5 bits (127), Expect = 2e-06
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYEIKEC-DWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++EI D + ++ GNVFTIGKG KPWVSLPKGKG+KL
Sbjct: 8 KHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKL 54
>gb|ACJ70374.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70375.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70376.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70377.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70378.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70379.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70380.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70381.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70382.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70383.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70384.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70385.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70386.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70387.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70388.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70389.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70390.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70391.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70392.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70393.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70394.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70395.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70396.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70397.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70398.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70399.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70400.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70401.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70402.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70403.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70404.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70405.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70406.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70407.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70408.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70409.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70410.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70411.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70412.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACJ70413.1| putative ribosomal protein S4, partial [Pinus sylvestris]
gb|ACL51784.1| putative ribosomal protein S4, partial [Pinus contorta]
gb|ACL51785.1| putative ribosomal protein S4, partial [Pinus nigra]
gb|ACL51786.1| putative ribosomal protein S4, partial [Pinus pinaster]
gb|ACL51787.1| putative ribosomal protein S4, partial [Pinus ponderosa]
gb|ACL51788.1| putative ribosomal protein S4, partial [Pinus resinosa]
Length = 71
Score = 53.5 bits (127), Expect = 2e-06
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYEIKEC-DWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++EI D + ++ GNVFTIGKG KPWVSLPKGKG+KL
Sbjct: 8 KHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKL 54
>ref|WP_073994925.1| hypothetical protein [Enterococcus faecium]
Length = 92
Score = 53.9 bits (128), Expect = 3e-06
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3
Query: 573 FFFKQKTAYEIKECDWSSDVCSSDLGNVF 487
FFFKQKTAYEI DWSSDVCSSDL N+F
Sbjct: 25 FFFKQKTAYEILGRDWSSDVCSSDLSNIF 53
>ref|WP_080490016.1| hypothetical protein [Enterococcus faecalis]
Length = 99
Score = 53.5 bits (127), Expect = 4e-06
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 458 TQGFAPLPMVKTLPRSEEHTSELQSHSFISYAVFCLKKK 574
+Q F L + PRSEEHTSELQS FISYAVFCLKKK
Sbjct: 49 SQNFMWLDALILFPRSEEHTSELQSLGFISYAVFCLKKK 87
>dbj|GAV73601.1| KOW domain-containing protein/Ribosomal_S4e domain-containing
protein/S4 domain-containing protein/RS4NT
domain-containing protein, partial [Cephalotus
follicularis]
Length = 262
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYEIKEC-DWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
KQK ++E D + ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 200 KQKGSFETVHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 246
>ref|XP_018500446.1| PREDICTED: 40S ribosomal protein S4 [Pyrus x bretschneideri]
Length = 171
Score = 55.1 bits (131), Expect = 5e-06
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 107 KHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 153
>ref|XP_021822144.1| 40S ribosomal protein S4 [Prunus avium]
Length = 264
Score = 56.2 bits (134), Expect = 5e-06
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D S ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 200 KHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 246
>gb|KMZ75979.1| 40S ribosomal protein S4-2 [Zostera marina]
Length = 264
Score = 56.2 bits (134), Expect = 5e-06
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K +E I D + ++ LGNVFTIGKGAKPWVSLPKGKGIKL
Sbjct: 200 KHKGTFETIHVQDSTGHEFATRLGNVFTIGKGAKPWVSLPKGKGIKL 246
>ref|XP_007211867.1| 40S ribosomal protein S4 [Prunus persica]
ref|XP_008225941.1| PREDICTED: 40S ribosomal protein S4-like [Prunus mume]
gb|ONI11682.1| hypothetical protein PRUPE_4G120500 [Prunus persica]
Length = 264
Score = 56.2 bits (134), Expect = 5e-06
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D S ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 200 KHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 246
>ref|XP_020698236.1| 40S ribosomal protein S4-3-like [Dendrobium catenatum]
gb|PKU66270.1| 40S ribosomal protein S4-3 [Dendrobium catenatum]
Length = 265
Score = 56.2 bits (134), Expect = 5e-06
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K +E I D S ++ LGNVFTIGKG KPW+SLPKGKGIKL
Sbjct: 200 KHKGTFETIHVQDASGQYFATRLGNVFTIGKGTKPWISLPKGKGIKL 246
>ref|XP_021679864.1| 40S ribosomal protein S4 [Hevea brasiliensis]
Length = 179
Score = 55.1 bits (131), Expect = 5e-06
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + ++ LGNVFTIGKG+KPWVSLPKGKGIKL
Sbjct: 116 KHKGSFETIHIQDATGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 162
>gb|PHT73055.1| 40S ribosomal protein S4 [Capsicum annuum]
Length = 95
Score = 53.1 bits (126), Expect = 5e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3
Query: 501 LGNVFTIGKGAKPWVSLPKGKGIKL 427
LGNVFT+GKG KPWVSLPKGKGIKL
Sbjct: 53 LGNVFTLGKGIKPWVSLPKGKGIKL 77
>gb|KJB38001.1| hypothetical protein B456_006G231800 [Gossypium raimondii]
Length = 191
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K ++E I D + ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 129 KHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 175
>dbj|GAU13922.1| hypothetical protein TSUD_262490, partial [Trifolium subterraneum]
Length = 260
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 564 KQKTAYE-IKECDWSSDVCSSDLGNVFTIGKGAKPWVSLPKGKGIKL 427
K K +E I D S ++ LGNVFTIGKG KPWVSLPKGKGIKL
Sbjct: 199 KHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 245