BLASTX nr result
ID: Ophiopogon26_contig00009821
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00009821
(621 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK58359.1| uncharacterized protein A4U43_C09F11440 [Asparagu... 89 4e-19
ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochon... 89 3e-17
gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus... 70 7e-12
ref|XP_010251346.1| PREDICTED: uncharacterized protein LOC104593... 70 2e-11
gb|OAY73386.1| Cleavage and polyadenylation specificity factor s... 71 8e-11
ref|XP_019098615.1| PREDICTED: glycine-rich RNA-binding protein ... 66 3e-10
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 69 7e-10
ref|XP_024023946.1| cleavage and polyadenylation specificity fac... 69 7e-10
ref|XP_021667444.1| cleavage and polyadenylation specificity fac... 69 7e-10
gb|PON91400.1| Splicing factor-like protein [Trema orientalis] 69 7e-10
gb|PON42322.1| Splicing factor-like protein [Parasponia andersonii] 69 7e-10
ref|XP_020426099.1| cleavage and polyadenylation specificity fac... 69 7e-10
ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-bindin... 68 7e-10
ref|XP_020110829.1| LOW QUALITY PROTEIN: cleavage and polyadenyl... 68 1e-09
emb|CBI16834.3| unnamed protein product, partial [Vitis vinifera] 67 2e-09
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro... 67 2e-09
ref|XP_010556354.1| PREDICTED: RNA-binding motif protein, X-link... 67 2e-09
ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chro... 67 2e-09
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 67 2e-09
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 67 2e-09
>gb|ONK58359.1| uncharacterized protein A4U43_C09F11440 [Asparagus officinalis]
Length = 140
Score = 89.4 bits (220), Expect = 4e-19
Identities = 50/101 (49%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = +3
Query: 345 MPGIGPP--------INNFNSSRVLEYAHENIRVG-DLGYQKGXXXXXXXXXXXXXXXXX 497
MPG+ P +NFN+SRV EY E VG D G+Q+G
Sbjct: 1 MPGVAVPQQNPIVGSSSNFNNSRVSEYTQEVTHVGGDSGFQRGPTAQIPAKVPAPAPPVP 60
Query: 498 XXXXXXXDVNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
DVNG TMLFVGELHWWTTDADLE VLTQYGR+KE
Sbjct: 61 RPAVVPVDVNGPTMLFVGELHWWTTDADLERVLTQYGRLKE 101
>ref|XP_020245280.1| glycine-rich RNA-binding protein 3, mitochondrial-like [Asparagus
officinalis]
Length = 421
Score = 89.4 bits (220), Expect = 3e-17
Identities = 50/101 (49%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = +3
Query: 345 MPGIGPP--------INNFNSSRVLEYAHENIRVG-DLGYQKGXXXXXXXXXXXXXXXXX 497
MPG+ P +NFN+SRV EY E VG D G+Q+G
Sbjct: 1 MPGVAVPQQNPIVGSSSNFNNSRVSEYTQEVTHVGGDSGFQRGPTAQIPAKVPAPAPPVP 60
Query: 498 XXXXXXXDVNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
DVNG TMLFVGELHWWTTDADLE VLTQYGR+KE
Sbjct: 61 RPAVVPVDVNGPTMLFVGELHWWTTDADLERVLTQYGRLKE 101
>gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus officinalis]
Length = 147
Score = 70.5 bits (171), Expect = 7e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +3
Query: 519 DVNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
D+NG TMLFVGELHWWTTDADLESVLT YGRVKE
Sbjct: 16 DMNGPTMLFVGELHWWTTDADLESVLTHYGRVKE 49
>ref|XP_010251346.1| PREDICTED: uncharacterized protein LOC104593287 [Nelumbo nucifera]
Length = 185
Score = 70.5 bits (171), Expect = 2e-11
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = +3
Query: 6 MDPMGEEQLDYGDDDFAGNPKLHHQNSGVGGAIPALTXXXXXXXXXXXXXLYNDVNVGEH 185
MDPM EEQLDYGD+++ G K+ +Q GGAIPAL LYNDVNVG+
Sbjct: 1 MDPMAEEQLDYGDEEYGGGQKIQYQG---GGAIPALAEEEMMGEDDEYDDLYNDVNVGDG 57
Query: 186 FMXXXXXXXXXXXXXXXXXXLAAVPCVGGGGNNGILPQ----AQPPIPKMEPPANASMPG 353
F+ A VP +GG GN GI Q A +P+ S+PG
Sbjct: 58 FLKLXRPE-------------AIVP-LGGIGNGGIQAQKTDGAGSRVPEPGGSQEVSIPG 103
Query: 354 IG 359
+G
Sbjct: 104 VG 105
>gb|OAY73386.1| Cleavage and polyadenylation specificity factor subunit CG7185
[Ananas comosus]
Length = 654
Score = 71.2 bits (173), Expect = 8e-11
Identities = 35/62 (56%), Positives = 38/62 (61%)
Frame = +3
Query: 6 MDPMGEEQLDYGDDDFAGNPKLHHQNSGVGGAIPALTXXXXXXXXXXXXXLYNDVNVGEH 185
MDPM EEQLDY +DDF GN +L H G GGAIPAL LY+DVNVGE
Sbjct: 54 MDPMTEEQLDYEEDDFGGNQRLRHHGGGGGGAIPALAEEDMMGDDDEFDDLYSDVNVGEG 113
Query: 186 FM 191
FM
Sbjct: 114 FM 115
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 519 DVNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
D NG T LFVGELHWWTTDADLES+L Q+GRVKE
Sbjct: 247 DNNGPTTLFVGELHWWTTDADLESILMQFGRVKE 280
>ref|XP_019098615.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like, partial
[Camelina sativa]
Length = 151
Score = 66.2 bits (160), Expect = 3e-10
Identities = 27/32 (84%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA++ES+L+QYGRVKE
Sbjct: 38 NGNTMLFVGELHWWTTDAEIESILSQYGRVKE 69
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 220 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 251
>ref|XP_024023946.1| cleavage and polyadenylation specificity factor subunit CG7185
[Morus notabilis]
Length = 644
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 220 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 251
>ref|XP_021667444.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
ref|XP_021667445.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
ref|XP_021667447.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
Length = 653
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 226 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 257
>gb|PON91400.1| Splicing factor-like protein [Trema orientalis]
Length = 659
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 230 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 261
>gb|PON42322.1| Splicing factor-like protein [Parasponia andersonii]
Length = 659
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 230 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 261
>ref|XP_020426099.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426104.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426109.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
gb|ONI30252.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30253.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30254.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30255.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30256.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30257.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
Length = 660
Score = 68.6 bits (166), Expect = 7e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 231 NGSTMLFVGELHWWTTDAELESVLSQYGRVKE 262
>ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 3,
mitochondrial [Asparagus officinalis]
Length = 370
Score = 68.2 bits (165), Expect = 7e-10
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 522 VNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
+NG TMLFVGELHWWTTDADLESVLT YGRVKE
Sbjct: 1 MNGPTMLFVGELHWWTTDADLESVLTHYGRVKE 33
>ref|XP_020110829.1| LOW QUALITY PROTEIN: cleavage and polyadenylation specificity
factor subunit 6-like [Ananas comosus]
Length = 538
Score = 67.8 bits (164), Expect = 1e-09
Identities = 57/177 (32%), Positives = 70/177 (39%), Gaps = 22/177 (12%)
Frame = +3
Query: 156 LYNDVNVGEHFMXXXXXXXXXXXXXXXXXXLAAVPCVGGGGNNGILP----------QAQ 305
LYNDVNVG+ F L +V GGGG G P A
Sbjct: 42 LYNDVNVGDGF-------------------LHSVARSGGGGGAGGFPGEEPACRPHAAAA 82
Query: 306 PPIPKMEPPANASMPGIG--PPINNFNSSRVLEYAHENIR----------VGDLGYQKGX 449
PP P +PGI P I ++ R + + + +R VGD G G
Sbjct: 83 PPPPTAPEKVQVQIPGIAGVPKIERPSADRSVGFPDQGLRGGVAAEAAAAVGDGGGGGGR 142
Query: 450 XXXXXXXXXXXXXXXXXXXXXXXDVNGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
G+T LFVGELHWWTTDADLE+ L++YG VKE
Sbjct: 143 -------------------------GGTTTLFVGELHWWTTDADLEAELSKYGPVKE 174
>emb|CBI16834.3| unnamed protein product, partial [Vitis vinifera]
Length = 491
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 208 NGATMLFVGELHWWTTDAELESVLSQYGRVKE 239
>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
nucifera]
Length = 599
Score = 67.4 bits (163), Expect = 2e-09
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = +3
Query: 6 MDPMGEEQLDYGDDDFAGNPKLHHQNSGVGGAIPALTXXXXXXXXXXXXXLYNDVNVGEH 185
MDPM EEQLDYGD+++ G K+ +Q GGAI AL LYNDVNVG+
Sbjct: 1 MDPMAEEQLDYGDEEYGGGQKIQYQG---GGAISALAEEEMMGEDDEYDDLYNDVNVGDG 57
Query: 186 FMXXXXXXXXXXXXXXXXXXLAAVPCVGGGGNNGILPQ----AQPPIPKMEPPANASMPG 353
F+ A VP +GG GN GI Q ++ +P+ S+PG
Sbjct: 58 FLKLQRPE-------------AIVP-LGGIGNGGIQAQKTDGSRSRVPEPGGSQEVSIPG 103
Query: 354 IG 359
+G
Sbjct: 104 VG 105
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA+LE VL+QYGRVKE
Sbjct: 231 NGTTMLFVGELHWWTTDAELEXVLSQYGRVKE 262
>ref|XP_010556354.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Tarenaya
hassleriana]
Length = 609
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 212 NGNTMLFVGELHWWTTDAELESVLSQYGRVKE 243
>ref|XP_008221952.1| PREDICTED: RNA-binding motif protein, X chromosome [Prunus mume]
Length = 647
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NGSTMLFVGELHWWTTD++LESVL+QYGRVKE
Sbjct: 231 NGSTMLFVGELHWWTTDSELESVLSQYGRVKE 262
Score = 56.6 bits (135), Expect = 8e-06
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3
Query: 6 MDPMGEEQLDYGDDDFAGNPKLHHQNSGVGGAIPALTXXXXXXXXXXXXXLYNDVNVGEH 185
MDPM EEQ+DY D+++ G KL +Q S GAI AL LYNDVNVGE
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGS---GAISALADEEPMVEDDEYDDLYNDVNVGEG 57
Query: 186 FM 191
F+
Sbjct: 58 FL 59
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 229 NGATMLFVGELHWWTTDAELESVLSQYGRVKE 260
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 525 NGSTMLFVGELHWWTTDADLESVLTQYGRVKE 620
NG+TMLFVGELHWWTTDA+LESVL+QYGRVKE
Sbjct: 235 NGATMLFVGELHWWTTDAELESVLSQYGRVKE 266