BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00009795
         (3689 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isof...  2002   0.0  
ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isof...  1998   0.0  
gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagu...  1822   0.0  
ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ana...  1734   0.0  
ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I sub...  1731   0.0  
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub...  1722   0.0  
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1718   0.0  
ref|XP_019055826.1| PREDICTED: DNA-directed RNA polymerase I sub...  1605   0.0  
ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I sub...  1599   0.0  
ref|XP_021314715.1| DNA-directed RNA polymerase I subunit 2 isof...  1590   0.0  
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...  1587   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1586   0.0  
ref|XP_008664805.1| DNA-directed RNA polymerase I subunit 2 [Zea...  1580   0.0  
gb|PKA48040.1| DNA-directed RNA polymerase II subunit RPB2 [Apos...  1569   0.0  
ref|XP_006661904.2| PREDICTED: DNA-directed RNA polymerase I sub...  1568   0.0  
ref|XP_010067710.1| PREDICTED: DNA-directed RNA polymerase I sub...  1566   0.0  
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...  1558   0.0  
ref|XP_020150651.1| DNA-directed RNA polymerase I subunit 2 isof...  1555   0.0  
ref|XP_020150652.1| DNA-directed RNA polymerase I subunit 2 isof...  1554   0.0  
gb|PNT67640.1| hypothetical protein BRADI_3g29917v3 [Brachypodiu...  1547   0.0  

>ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Asparagus
            officinalis]
          Length = 1160

 Score = 2002 bits (5186), Expect = 0.0
 Identities = 994/1157 (85%), Positives = 1060/1157 (91%), Gaps = 8/1157 (0%)
 Frame = -1

Query: 3686 MASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGE 3507
            MA +K++KP+ +++R LFKPHIESFDYFIDKGMELA+ SIRP EI D   NTKLRIYFGE
Sbjct: 1    MAPTKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADG--NTKLRIYFGE 58

Query: 3506 PRLLSPKDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMS 3327
            PRLL P+DA ++R+IYPQECREARTTY+G+ +VE FFQYNDG SIRHRLSFG LPIMLMS
Sbjct: 59   PRLLPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMS 118

Query: 3326 KCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGD 3147
            K CHLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F ARGD
Sbjct: 119  KRCHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGD 178

Query: 3146 GYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHE 2967
            GYSDKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTNDHE
Sbjct: 179  GYSDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHE 238

Query: 2966 IYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIE 2787
            IYVSLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPAI+
Sbjct: 239  IYVSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAID 298

Query: 2786 GFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 2607
            GFE E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE
Sbjct: 299  GFEAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 358

Query: 2606 VLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSV 2427
            VLLPGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGRS+
Sbjct: 359  VLLPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSI 418

Query: 2426 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 2247
            ESMLKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRKLM
Sbjct: 419  ESMLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLM 478

Query: 2246 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 2067
            PESWGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLGMS
Sbjct: 479  PESWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMS 538

Query: 2066 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVP 1887
            PLLPKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S IPDDLEVGYVP
Sbjct: 539  PLLPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRIPDDLEVGYVP 598

Query: 1886 LSFGGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGRRSF 1707
            LS GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGRRSF
Sbjct: 599  LSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRRSF 658

Query: 1706 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHL 1527
            PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKAYHL
Sbjct: 659  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAYHL 718

Query: 1526 QTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 1347
            QTPQSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY
Sbjct: 719  QTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 778

Query: 1346 KTESIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXX 1167
            +TESIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD     
Sbjct: 779  QTESIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLTSD 837

Query: 1166 XXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQL 987
                  KGSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVCSQL
Sbjct: 838  VKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCSQL 897

Query: 986  WPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSV- 810
            WPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFASSV 
Sbjct: 898  WPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSVD 957

Query: 809  ------KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM 648
                  +SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM
Sbjct: 958  KKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHM 1017

Query: 647  VSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYH 468
            VSDKFQVRSTGTVDPITRQPV           GEMERDSVLAHGAAYLLHDRLHSCSDYH
Sbjct: 1018 VSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSDYH 1077

Query: 467  IAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFR 291
            IAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPYVFR
Sbjct: 1078 IAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYVFR 1137

Query: 290  YLATELAAMNIKMELKL 240
            YLA ELAAMNI+MELKL
Sbjct: 1138 YLAAELAAMNIRMELKL 1154


>ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Asparagus
            officinalis]
          Length = 1163

 Score = 1998 bits (5175), Expect = 0.0
 Identities = 994/1160 (85%), Positives = 1061/1160 (91%), Gaps = 11/1160 (0%)
 Frame = -1

Query: 3686 MASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGE 3507
            MA +K++KP+ +++R LFKPHIESFDYFIDKGMELA+ SIRP EI D   NTKLRIYFGE
Sbjct: 1    MAPTKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADG--NTKLRIYFGE 58

Query: 3506 PRLLSPKDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMS 3327
            PRLL P+DA ++R+IYPQECREARTTY+G+ +VE FFQYNDG SIRHRLSFG LPIMLMS
Sbjct: 59   PRLLPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMS 118

Query: 3326 KCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGD 3147
            K CHLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F ARGD
Sbjct: 119  KRCHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGD 178

Query: 3146 GYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHE 2967
            GYSDKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTNDHE
Sbjct: 179  GYSDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHE 238

Query: 2966 IYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIE 2787
            IYVSLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPAI+
Sbjct: 239  IYVSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAID 298

Query: 2786 GFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 2607
            GFE E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE
Sbjct: 299  GFEAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 358

Query: 2606 VLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSV 2427
            VLLPGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGRS+
Sbjct: 359  VLLPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSI 418

Query: 2426 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 2247
            ESMLKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRKLM
Sbjct: 419  ESMLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLM 478

Query: 2246 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 2067
            PESWGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLGMS
Sbjct: 479  PESWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMS 538

Query: 2066 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATS---MIPDDLEVG 1896
            PLLPKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S   +IPDDLEVG
Sbjct: 539  PLLPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRVGLIPDDLEVG 598

Query: 1895 YVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGR 1716
            YVPLS GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGR
Sbjct: 599  YVPLSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGR 658

Query: 1715 RSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKA 1536
            RSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKA
Sbjct: 659  RSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKA 718

Query: 1535 YHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 1356
            YHLQTPQSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG
Sbjct: 719  YHLQTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 778

Query: 1355 HIYKTESIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXX 1176
            HIY+TESIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD  
Sbjct: 779  HIYQTESIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDL 837

Query: 1175 XXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVC 996
                     KGSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVC
Sbjct: 838  TSDVKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVC 897

Query: 995  SQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFAS 816
            SQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFAS
Sbjct: 898  SQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFAS 957

Query: 815  SV-------KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRL 657
            SV       +SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRL
Sbjct: 958  SVDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRL 1017

Query: 656  RHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCS 477
            RHMVSDKFQVRSTGTVDPITRQPV           GEMERDSVLAHGAAYLLHDRLHSCS
Sbjct: 1018 RHMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCS 1077

Query: 476  DYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPY 300
            DYHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPY
Sbjct: 1078 DYHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPY 1137

Query: 299  VFRYLATELAAMNIKMELKL 240
            VFRYLA ELAAMNI+MELKL
Sbjct: 1138 VFRYLAAELAAMNIRMELKL 1157


>gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagus officinalis]
          Length = 1087

 Score = 1822 bits (4719), Expect = 0.0
 Identities = 905/1039 (87%), Positives = 957/1039 (92%), Gaps = 8/1039 (0%)
 Frame = -1

Query: 3332 MSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCAR 3153
            +SK CHLRGADP KLI+HKEEATEMGGYFICNGLERLCRLLILQKRNYPM LVRK F AR
Sbjct: 44   LSKRCHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRAR 103

Query: 3152 GDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTND 2973
            GDGYSDKAV++RCVREDQS VTVKLYYLQNGSARLGFWI GREFLLPVGIVLKALIDTND
Sbjct: 104  GDGYSDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTND 163

Query: 2972 HEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPA 2793
            HEIYVSLT CYKERYQREKG VGTQLIGERAQIIL+EVR LSLFTRSDCLKHIG+YFKPA
Sbjct: 164  HEIYVSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPA 223

Query: 2792 IEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN 2613
            I+GFE E+Y  VADAVLRDY+ VHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN
Sbjct: 224  IDGFEAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN 283

Query: 2612 QEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGR 2433
            QEVLLPGHLI++YLKEKVVEWLR+SRR L +EM K+ +F+I DP+QVKKFL +SSV+IGR
Sbjct: 284  QEVLLPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGR 343

Query: 2432 SVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRK 2253
            S+ESMLKVGRLAT +SLDLPQK+G+TIQAERLNYLRFISHF AVHRGA F KMRTTVVRK
Sbjct: 344  SIESMLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRK 403

Query: 2252 LMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLG 2073
            LMPESWGFLCPVHTPDGEPCGLLNHMTS C +TSYFN EGK+KDFRDIQRSIQNVLIRLG
Sbjct: 404  LMPESWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLG 463

Query: 2072 MSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGY 1893
            MSPLLPKLEHAGPPEVLQVLLDGR+VGSIAC+EVEKAVAHIR LKLSA+S IPDDLEVGY
Sbjct: 464  MSPLLPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRIPDDLEVGY 523

Query: 1892 VPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDHNIELIGPFEQAFMEIRCADGGDGGRR 1713
            VPLS GGAYPGLYLFTSPSRF+RPVRNISH TD NIELIGPFEQAFMEIRCADG DGGRR
Sbjct: 524  VPLSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRR 583

Query: 1712 SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAY 1533
            SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA+RFRTDVKAY
Sbjct: 584  SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAY 643

Query: 1532 HLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH 1353
            HLQTPQSPIVRT SYNKYC+DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH
Sbjct: 644  HLQTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH 703

Query: 1352 IYKTESIDLAERQEKSNPLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXX 1173
            IY+TESIDLAERQEKS+  K+FARSND+S +S IDSDGLPYIGQMV PKEP YSTYD   
Sbjct: 704  IYQTESIDLAERQEKSSK-KVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLT 762

Query: 1172 XXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCS 993
                    KGSEPVIVDNVTV+GT +KN MQKVNIRTR IRNP+IGDKFSSRHGQKGVCS
Sbjct: 763  SDVKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCS 822

Query: 992  QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASS 813
            QLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSL G+F DATPFASS
Sbjct: 823  QLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASS 882

Query: 812  V-------KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR 654
            V       +SERSS VD+LGP+LASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR
Sbjct: 883  VDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR 942

Query: 653  HMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSD 474
            HMVSDKFQVRSTGTVDPITRQPV           GEMERDSVLAHGAAYLLHDRLHSCSD
Sbjct: 943  HMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSD 1002

Query: 473  YHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYV 297
            YHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    FTC+ACKT+KGMETVAMPYV
Sbjct: 1003 YHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYV 1062

Query: 296  FRYLATELAAMNIKMELKL 240
            FRYLA ELAAMNI+MELKL
Sbjct: 1063 FRYLAAELAAMNIRMELKL 1081


>ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ananas comosus]
          Length = 1168

 Score = 1734 bits (4491), Expect = 0.0
 Identities = 852/1159 (73%), Positives = 996/1159 (85%), Gaps = 12/1159 (1%)
 Frame = -1

Query: 3680 SSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPR 3501
            +SK + P+ A +RELF+PHI+SFDYF+D+G+E A+ SIRP EI DP+T +KLRI F +P 
Sbjct: 2    ASKAKNPDYAALRELFRPHIDSFDYFLDEGLEKALLSIRPAEIADPSTGSKLRISFEKPH 61

Query: 3500 LLSP-KDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSK 3324
            +L P ++   S  ++P ECR+ARTTY+GE  V+  FQY+ GV +R   +FG+LPIML SK
Sbjct: 62   VLPPMREGRLSEPLFPFECRQARTTYKGEFRVDVAFQYDGGVVVRESFNFGHLPIMLKSK 121

Query: 3323 CCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDG 3144
             CHLRGADPQKL+FHKEEATEMGGYFICNGLERL RLLI+QK NYPMG+VRKSF ARG G
Sbjct: 122  LCHLRGADPQKLVFHKEEATEMGGYFICNGLERLGRLLIIQKSNYPMGMVRKSFRARGAG 181

Query: 3143 YSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI 2964
            YSDKAV++RCVREDQSSV++KLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDT+D EI
Sbjct: 182  YSDKAVVMRCVREDQSSVSLKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTSDREI 241

Query: 2963 YVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEG 2784
            +VSLT CY ++YQREKGVVGTQLIGERAQIIL+EVR LSL TR  CLKHIG+YF+P ++G
Sbjct: 242  FVSLTCCYNDKYQREKGVVGTQLIGERAQIILDEVRTLSLLTRLQCLKHIGEYFQPVMDG 301

Query: 2783 FETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 2604
            FE+E+++ VA+AVLRDY+ VHL++NHDKFNLLIF+LQKLYALVDQTAAPDN D LQNQEV
Sbjct: 302  FESESHETVAEAVLRDYIFVHLSNNHDKFNLLIFILQKLYALVDQTAAPDNPDALQNQEV 361

Query: 2603 LLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVE 2424
            LLPGHL+ +Y+KEK+ +WL KSRR + +E+TK  +F + + + +KK L ++S ++GR+VE
Sbjct: 362  LLPGHLVTIYVKEKLQDWLSKSRRLIQEEITKDKSFELKNLNHIKKILNRNSGSVGRAVE 421

Query: 2423 SMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMP 2244
            SM+K+GRL T + LDLPQ++GMTIQAERLNY RFI+HFR+VHRGA F KMRTT VRKL+P
Sbjct: 422  SMIKLGRLNTASGLDLPQREGMTIQAERLNYCRFIAHFRSVHRGASFAKMRTTSVRKLLP 481

Query: 2243 ESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSP 2064
            ESWGFLCPVHTPDGEPCGLLNHMTS C V S+++++GKIKDF  I+ SI  VL+ +GM+P
Sbjct: 482  ESWGFLCPVHTPDGEPCGLLNHMTSTCCVASFYSSDGKIKDFLKIRMSILTVLVGIGMTP 541

Query: 2063 LLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPL 1884
            L PKLE AGPPEVL VLLDG VVGSIA  +VEKAVAH+R LKL A S IP+DLEVGYVPL
Sbjct: 542  LTPKLERAGPPEVLHVLLDGCVVGSIASGKVEKAVAHLRSLKLFAVSGIPEDLEVGYVPL 601

Query: 1883 SFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR- 1713
            S GGAYPGLYL+++P+RFIRPVRN+SH+++   +IELIGPFEQAFMEIRC DGGDGGR+ 
Sbjct: 602  SLGGAYPGLYLYSNPARFIRPVRNLSHSSNGSQSIELIGPFEQAFMEIRCPDGGDGGRKE 661

Query: 1712 SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAY 1533
            SFPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAL+FR DVK+Y
Sbjct: 662  SFPATHEEIHPTSILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALKFRADVKSY 721

Query: 1532 HLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGH 1353
            HLQTPQ+PIVRT +Y+KYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+RG+CRGH
Sbjct: 722  HLQTPQTPIVRTRTYSKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGMCRGH 781

Query: 1352 IYKTESIDLAERQEKSN-PLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXX 1176
            IY+TE+IDLA++ ++ +  L+IFARSNDR   S IDSDGLPYIG+ ++P EP+YSTY+  
Sbjct: 782  IYQTETIDLAKKLDRGDRVLEIFARSNDRKMKSSIDSDGLPYIGETIHPNEPWYSTYNTL 841

Query: 1175 XXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVC 996
                     KGSEPVI+D V V GT +KNYMQKVNIRTR  RNP+IGDKFSSRHGQKGVC
Sbjct: 842  TSVTKPTTLKGSEPVIIDYVAVDGTSSKNYMQKVNIRTRRTRNPIIGDKFSSRHGQKGVC 901

Query: 995  SQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFAS 816
            SQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPFA+
Sbjct: 902  SQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFIDATPFAT 961

Query: 815  SVKSERS------SQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLR 654
            S  + +       S VD+LGP+LASHGFNYHG EVLYSG +GTE+TCEIFIGPVYYQRLR
Sbjct: 962  SKDANQDNPSKPYSVVDELGPLLASHGFNYHGVEVLYSGVFGTELTCEIFIGPVYYQRLR 1021

Query: 653  HMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSD 474
            HMVSDKFQVRSTGTVD ITRQP+           GEMERD++LAHGAAYLLHDRLHSCSD
Sbjct: 1022 HMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHSCSD 1081

Query: 473  YHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYV 297
            YHIA+VCS CGS+LTAT IQ QKR + +I G+P A+   +FTC+AC+T KGMETVAMPYV
Sbjct: 1082 YHIADVCSNCGSVLTATTIQPQKRAVREILGLPPARAPKSFTCHACETSKGMETVAMPYV 1141

Query: 296  FRYLATELAAMNIKMELKL 240
            F+YLA ELAAMNIKMEL+L
Sbjct: 1142 FKYLAAELAAMNIKMELRL 1160


>ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Phoenix
            dactylifera]
          Length = 1177

 Score = 1731 bits (4483), Expect = 0.0
 Identities = 860/1168 (73%), Positives = 988/1168 (84%), Gaps = 21/1168 (1%)
 Frame = -1

Query: 3680 SSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPR 3501
            +SK  KP+   +RELF+PHI+SF+YFID+G+E A+ SIRP E+ DP+T  KLRIYF  P+
Sbjct: 2    ASKATKPDYEALRELFRPHIDSFNYFIDEGLEKALLSIRPVEVSDPSTGGKLRIYFENPQ 61

Query: 3500 LLSP--------KDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYL 3345
            +  P             + ++YP ECR+ARTTY+GE  V    QYN+   ++  +SFG+L
Sbjct: 62   VFHPVREGRITTTKGRITEALYPHECRQARTTYKGEFKVTICLQYNERQPVQTPMSFGHL 121

Query: 3344 PIMLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKS 3165
            PIML S+ CHL+ ADPQKLIFHKEEATEMGGYFICNGLERL RLLI+ KRNYPMG++R S
Sbjct: 122  PIMLRSRLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSS 181

Query: 3164 FCARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALI 2985
            F +RG GYSDKAV++RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALI
Sbjct: 182  FRSRGVGYSDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALI 241

Query: 2984 DTNDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDY 2805
            DT+D EI+VSLT CY +RYQ+++G VG+Q+IGERAQIILEEVR LSL T S CLKHIG+Y
Sbjct: 242  DTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEY 301

Query: 2804 FKPAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGD 2625
            F+P ++GFE E +  VA+AVLRDYV VHLT NHDKFNLLIFMLQKLYALVDQT APDN D
Sbjct: 302  FRPVMDGFENEFHTTVAEAVLRDYVFVHLTRNHDKFNLLIFMLQKLYALVDQTVAPDNSD 361

Query: 2624 VLQNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMT-KANNFNIIDPDQVKKFLGKSS 2448
             LQNQE+LLPGHLI +Y+KEKV +WL KSRRQLLDE+  K  N  I    QV KFL +++
Sbjct: 362  ALQNQEILLPGHLITIYVKEKVQDWLNKSRRQLLDELAKKEKNLQISMVHQVAKFLNRNA 421

Query: 2447 VTIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRT 2268
             ++GRSVESM+K+GRL T +SLDLPQ++GMTIQAERLN+ RF+SHFR+VHRGA F KMR 
Sbjct: 422  ASVGRSVESMIKLGRLTTSSSLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFAKMRI 481

Query: 2267 TVVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNV 2088
            T VRKL+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S++++EGK+KDF  I+ SI  V
Sbjct: 482  TSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCCISSFYDSEGKVKDFLKIRMSIMTV 541

Query: 2087 LIRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDD 1908
            L+ +GM+PLLPKLE AGPP VL VLLDG VVGSIA S+VEKAVAHIR LKLS+ S +P+D
Sbjct: 542  LVGVGMTPLLPKLERAGPPVVLHVLLDGCVVGSIASSKVEKAVAHIRSLKLSSLSGVPND 601

Query: 1907 LEVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDH--NIELIGPFEQAFMEIRCAD 1734
            LEVGYVPLS GG YPGLYLFTSPSRFIRPVRNISH++D   NIELIGPFEQAFMEIRCAD
Sbjct: 602  LEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISHSSDSNLNIELIGPFEQAFMEIRCAD 661

Query: 1733 GGDGGRR-SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALR 1557
            GGDGGRR SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QAL+
Sbjct: 662  GGDGGRRESFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQ 721

Query: 1556 FRTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV 1377
            FR DVK+YHLQTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV
Sbjct: 722  FRADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSV 781

Query: 1376 DRGLCRGHIYKTESIDLAERQEKSN-PLKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEP 1200
            DRGLCRGHIY+TESIDL +  ++ +  L+IFARS++++  S IDSDGLPYIGQ+++P EP
Sbjct: 782  DRGLCRGHIYQTESIDLTKNHDREDRVLEIFARSSEKTMKSSIDSDGLPYIGQVIHPNEP 841

Query: 1199 YYSTYDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSS 1020
             YS+Y+           KGSEPVI+D VTV GT +KNYMQKVNIRTR  R P+IGDKFSS
Sbjct: 842  LYSSYNTLTSVTKPTRLKGSEPVIIDYVTVDGTTSKNYMQKVNIRTRRTRYPIIGDKFSS 901

Query: 1019 RHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEF 840
            RHGQKGVCSQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F
Sbjct: 902  RHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKF 961

Query: 839  QDATPFASSVK-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFI 681
             DATPF +SV        S+ S+ VD+LGP+LAS+GFNYHG EVLYSG +GTE+TCEIFI
Sbjct: 962  VDATPFQNSVSEKDEDRPSKSSTLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFI 1021

Query: 680  GPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLL 501
            GPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERDSVLAHGAAYLL
Sbjct: 1022 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLL 1081

Query: 500  HDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKG 324
            HDRLHSCSDYHIAEVCSFCGS+LTA+VIQ QKR + +I G+P A+   ++TC+ACKT KG
Sbjct: 1082 HDRLHSCSDYHIAEVCSFCGSVLTASVIQPQKRAVREIHGLPPARTPKSYTCHACKTSKG 1141

Query: 323  METVAMPYVFRYLATELAAMNIKMELKL 240
            METVAMPYVF+YLA E+AAMNIKMEL+L
Sbjct: 1142 METVAMPYVFKYLAAEMAAMNIKMELQL 1169


>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Elaeis
            guineensis]
          Length = 1175

 Score = 1722 bits (4461), Expect = 0.0
 Identities = 860/1170 (73%), Positives = 992/1170 (84%), Gaps = 23/1170 (1%)
 Frame = -1

Query: 3680 SSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPR 3501
            +SK  K +   +RELF+PHI+SF+YF+D+G+E A+ SIRP EI DP+   KLRIYF  P+
Sbjct: 2    ASKATKQDYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENPQ 61

Query: 3500 LLSP-KDAMSSRS-------IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYL 3345
            +  P ++   ++S       +YP ECR+A TTY+GE  V    QYND   ++  ++FG+L
Sbjct: 62   VFHPLREGRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGHL 121

Query: 3344 PIMLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKS 3165
            PIML SK CHL+ ADPQKLIFHKEEATEMGGYFICNGLERL RLLI+ KRNYPMG++R S
Sbjct: 122  PIMLRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSS 181

Query: 3164 FCARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALI 2985
            F +RG GYSDKAV++RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLP+GIVLKALI
Sbjct: 182  FRSRGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKALI 241

Query: 2984 DTNDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDY 2805
            DT+D EI+VSLT CY +RYQ+++G VG+Q+IGERAQIILEEVR LSL T S CLKHIG+Y
Sbjct: 242  DTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEY 301

Query: 2804 FKPAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGD 2625
            F+PA++GFE E++  VA+AVLRDYV VHLT+NHDKFNLLIFMLQKLYALVDQT APDN D
Sbjct: 302  FRPAMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNPD 361

Query: 2624 VLQNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKAN---NFNIIDPDQVKKFLGK 2454
             LQNQE+LLPGHLI +Y+KEK  +WL KSRRQLLDE+ K     +F+I+   QV KFL +
Sbjct: 362  ALQNQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIV--HQVVKFLNR 419

Query: 2453 SSVTIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKM 2274
            ++ ++GRS+ESM+KVGRLAT + LDLPQ++GMTIQAERLN+ RF+SHFR+VHRGA FTKM
Sbjct: 420  NAASLGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKM 479

Query: 2273 RTTVVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQ 2094
            R T VRKL+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S++++E K+KDF  I+ SI 
Sbjct: 480  RITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSIL 539

Query: 2093 NVLIRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIP 1914
             VL+ +GM+PLLPKLE AGPPEVL VLLDG VVGSIA SEVEKAVAHIR LKLS+ S IP
Sbjct: 540  TVLVGVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIP 599

Query: 1913 DDLEVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDH--NIELIGPFEQAFMEIRC 1740
            DDLEVGYVPLS GG YPGLYLFTSPSRFIRPVRN+SH++D+  NIELIGPFEQAFMEIRC
Sbjct: 600  DDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRC 659

Query: 1739 ADGGDGGRR-SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQA 1563
            ADGG GGRR SFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QA
Sbjct: 660  ADGGHGGRRQSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQA 719

Query: 1562 LRFRTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKS 1383
            L+FR DVK+YHLQTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKS
Sbjct: 720  LQFRADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKS 779

Query: 1382 SVDRGLCRGHIYKTESIDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPK 1206
            SVDRGLCRGHIY+TESIDL +  ++ +  L+IFARS+D++  S ID+DGLPYIGQ+++P 
Sbjct: 780  SVDRGLCRGHIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQVIHPN 839

Query: 1205 EPYYSTYDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKF 1026
            EP YS+Y+           KGSEPVIVD V+V G  +KNYMQKVNIRTR  R P+IGDKF
Sbjct: 840  EPLYSSYNTLTSVTKPTLLKGSEPVIVDYVSVDGATSKNYMQKVNIRTRRTRYPIIGDKF 899

Query: 1025 SSRHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLG 846
            SSRHGQKGVCSQLWPDIDMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G
Sbjct: 900  SSRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHG 959

Query: 845  EFQDATPFASSVK-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEI 687
            +F DATPF +SV        S+ SS VD+LGP+LAS+GFNYHG EVLYSG +GTE+TCEI
Sbjct: 960  KFVDATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEI 1019

Query: 686  FIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAY 507
            FIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERDSVLAHGAAY
Sbjct: 1020 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAY 1079

Query: 506  LLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTR 330
            LLHDRLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + +I G+P A+   ++TC+ACKT 
Sbjct: 1080 LLHDRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTS 1139

Query: 329  KGMETVAMPYVFRYLATELAAMNIKMELKL 240
            KGMETVAMPYVF+YLA ELAAMNIKMEL+L
Sbjct: 1140 KGMETVAMPYVFKYLAAELAAMNIKMELRL 1169


>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1169

 Score = 1718 bits (4449), Expect = 0.0
 Identities = 851/1162 (73%), Positives = 980/1162 (84%), Gaps = 14/1162 (1%)
 Frame = -1

Query: 3671 TEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLS 3492
            T K +   ++ELF+PHIESFDYF+D+G+E A  SIRP EI DP T  KLR+   +P+LL 
Sbjct: 4    TSKSDFQALQELFRPHIESFDYFLDEGLEKAFLSIRPIEISDPHTGIKLRVSLEKPQLLP 63

Query: 3491 P-KDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCH 3315
            P +D   S  ++P ECR+AR +Y+GE      FQY++GV +R  ++FG+LPIML SK CH
Sbjct: 64   PMRDGRLSEPLFPHECRQARISYKGEFRALVCFQYDEGVVVRENINFGHLPIMLKSKLCH 123

Query: 3314 LRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSD 3135
            LRGADPQKL+ HKEEATEMGGYFICNGLERL RLLI+QK+NYPM +VRKSF  RG GY D
Sbjct: 124  LRGADPQKLVAHKEEATEMGGYFICNGLERLVRLLIIQKQNYPMSMVRKSFRNRGPGYGD 183

Query: 3134 KAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVS 2955
            KAV++RCVREDQSSVT+KLYYL+NGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI+VS
Sbjct: 184  KAVVMRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIFVS 243

Query: 2954 LTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFET 2775
            LT CY +RYQREKG V TQLIGERAQIIL+EVR LSL+TRS CLKHIG+YF+PA+ GFET
Sbjct: 244  LTCCYNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQCLKHIGEYFRPAMNGFET 303

Query: 2774 ENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLP 2595
            E++  VA+AVLRDY+ VHL SNHDKFNLLIF+LQKLYALVDQTAAPDN D LQNQE+LLP
Sbjct: 304  ESHTTVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQTAAPDNPDALQNQEILLP 363

Query: 2594 GHLIALYLKEKVVEWLRKSRRQLLDEMT-KANNFNIIDPDQVKKFLGKSSVTIGRSVESM 2418
            GHLI +YLKE++ +WL+KS+RQLLDE   K  N +I +  QVKKF  +SS TIGR++ESM
Sbjct: 364  GHLITIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVKKFFSRSSATIGRAIESM 423

Query: 2417 LKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPES 2238
            LK+GRL T + LDLPQ++GM+IQAERLN+ R++SHFR+VHRGA F KMRTT VRKL+PES
Sbjct: 424  LKIGRLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRGASFAKMRTTSVRKLLPES 483

Query: 2237 WGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLL 2058
            WGFLCPV+TPDGEPCGLLNHMT AC V S++++EG++KDF  I+ SI +VL+ +GM+PLL
Sbjct: 484  WGFLCPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLKIRMSILSVLVGIGMTPLL 543

Query: 2057 PKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSF 1878
            PKLE AGPPEVL VLLDG VVGSI+  ++E+AVAHIRRLKLS    IP+DLEVGYVPLSF
Sbjct: 544  PKLERAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLSGICGIPEDLEVGYVPLSF 603

Query: 1877 GGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-F 1707
            GGAYPGLY+FT+ SRFIRPV N+   TD   NIELIGPFEQAFMEIRC DGG+GGRR  F
Sbjct: 604  GGAYPGLYMFTNSSRFIRPVINLIQVTDGSKNIELIGPFEQAFMEIRCPDGGNGGRREFF 663

Query: 1706 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHL 1527
            PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFS+QAL++R D+K+YHL
Sbjct: 664  PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQYRADLKSYHL 723

Query: 1526 QTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIY 1347
            QTPQSPIVRT SY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVDRGLCRGHIY
Sbjct: 724  QTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRGHIY 783

Query: 1346 KTESIDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXX 1170
            +TESIDLA + EK +  L+IFARSNDR   S IDSDGLPY+GQ ++P EP YSTY+    
Sbjct: 784  QTESIDLANKHEKEDRLLEIFARSNDRKLKSSIDSDGLPYVGQTIHPSEPLYSTYNTLTS 843

Query: 1169 XXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQ 990
                   KGSE VI+D V V GTG+KNY+QKVNIRTR  R P+IGDKFSSRHGQKGVCSQ
Sbjct: 844  ITKPTLLKGSEDVIIDYVAVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQ 903

Query: 989  LWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSV 810
            +WPD+DMPFSA+TGMRPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPF+ SV
Sbjct: 904  MWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFSRSV 963

Query: 809  -------KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRH 651
                    S+ SS VD+LGP+L S+GFNYHG EVLYSG YGTE+TCEIFIGPVYYQRLRH
Sbjct: 964  CNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRH 1023

Query: 650  MVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDY 471
            MVSDKFQVRSTGTVD ITRQP+           GEMERD+VLAHGAAYLLHDRLHSCSDY
Sbjct: 1024 MVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAVLAHGAAYLLHDRLHSCSDY 1083

Query: 470  HIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVF 294
            HIA+VCS+CGS+LTAT IQ QKR + +I G+P A+    + C +CKT KGMETVAMPYVF
Sbjct: 1084 HIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKNYICQSCKTGKGMETVAMPYVF 1143

Query: 293  RYLATELAAMNIKMELKLK*QS 228
            +YLA ELAAMNIKMEL+L  Q+
Sbjct: 1144 KYLAAELAAMNIKMELQLSNQA 1165


>ref|XP_019055826.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Nelumbo nucifera]
          Length = 1173

 Score = 1605 bits (4155), Expect = 0.0
 Identities = 813/1168 (69%), Positives = 948/1168 (81%), Gaps = 19/1168 (1%)
 Frame = -1

Query: 3686 MASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGE 3507
            M + K  K +  ++RELFKPHI+SFDYF+D G+E  +  I+P EIVD  T TKLRI+FG+
Sbjct: 1    MGAGKDTKHDYESLRELFKPHIDSFDYFVDAGLETMLMHIKPVEIVDSFTKTKLRIWFGK 60

Query: 3506 PRLLSPKDAMSSRSI----YPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPI 3339
              L  P+    S+SI     P ECR+A  +Y G+  V+  FQYN+GV +R +  FG LPI
Sbjct: 61   SELYPPQKERISKSIRDPLLPFECRQAGISYSGKFMVDVCFQYNNGVVVREKFGFGQLPI 120

Query: 3338 MLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFC 3159
            ML SK CHLRGADPQKL+ +KEEATEMGGYFI NGLERL RLLI+ KRNYPM +VR SF 
Sbjct: 121  MLKSKVCHLRGADPQKLVSYKEEATEMGGYFILNGLERLVRLLIMPKRNYPMSMVRNSFR 180

Query: 3158 ARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDT 2979
             R +GY+DKAV++RCVREDQS+VTVKLY+LQNGSARLGFWIRG+E+LLPVGIVLKALIDT
Sbjct: 181  ERREGYTDKAVVIRCVREDQSAVTVKLYHLQNGSARLGFWIRGKEYLLPVGIVLKALIDT 240

Query: 2978 NDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFK 2799
            +DHEIYVSLT C+ E  Q+ KG VGTQL+GER +IIL+EVR LSLFT   C++HIG+YF+
Sbjct: 241  SDHEIYVSLT-CHSEVNQKAKGTVGTQLVGERVKIILDEVRDLSLFTHLQCIQHIGEYFQ 299

Query: 2798 PAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVL 2619
              ++G ETE++ VV + VL+DY+ VHL +NHDKFNLLIFMLQKL++LVDQT  PDN D L
Sbjct: 300  AIMDGLETESHSVVGEVVLKDYIFVHLDNNHDKFNLLIFMLQKLFSLVDQTTVPDNPDTL 359

Query: 2618 QNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEM-TKANNFNIIDPDQVKKFLGKSSV- 2445
            QNQEVLLPGHLI +YLKEK+ +WL K RR L DE+  K  +   +    VKK L K+S  
Sbjct: 360  QNQEVLLPGHLITIYLKEKLQDWLLKGRRLLYDEIKNKGKSSEFLSLAHVKKVLDKNSPK 419

Query: 2444 TIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTT 2265
            +IG ++E+MLK GRL T   LDL QK+GM++QAERLN+LRF+SHFRAVHRGA F  +RTT
Sbjct: 420  SIGLALENMLKTGRLVTQTGLDLQQKEGMSVQAERLNFLRFLSHFRAVHRGASFAGLRTT 479

Query: 2264 VVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVL 2085
             VRKL+PE+WGFLCPVHTPDGEPCGLLNH+TS C +TSYF++ G +KDF  I+ SI +VL
Sbjct: 480  SVRKLLPETWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFDSHGNVKDFFKIRMSILSVL 539

Query: 2084 IRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDL 1905
            I +GM P LPKL  AGPPEVL VLLDGRVVGSI+ +EVE AVAH+RRLKLSA S IP+DL
Sbjct: 540  IGVGMMPSLPKLVRAGPPEVLSVLLDGRVVGSISSTEVENAVAHLRRLKLSACSGIPNDL 599

Query: 1904 EVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADG 1731
            EVGYVPL+ GGAYPGLYLFTSPSRF RPVRNIS +++   +IELIGPFEQ +MEIRCADG
Sbjct: 600  EVGYVPLTMGGAYPGLYLFTSPSRFARPVRNISVSSEEGQDIELIGPFEQVYMEIRCADG 659

Query: 1730 GDGGRRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRF 1554
            G+GGRRS FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ++RF
Sbjct: 660  GNGGRRSIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQSIRF 719

Query: 1553 RTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD 1374
            R D K YHLQTPQ+PIVRT++Y KY IDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+
Sbjct: 720  RADQKLYHLQTPQTPIVRTSAYTKYSIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVE 779

Query: 1373 RGLCRGHIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEP 1200
            RGLC G+IY+TE+IDLA++  KS+  LK+FARSN D+ST+SLIDSDGLPY+GQ V+P EP
Sbjct: 780  RGLCHGYIYQTETIDLADQSGKSDEDLKLFARSNVDKSTHSLIDSDGLPYVGQKVHPDEP 839

Query: 1199 YYSTYDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSS 1020
            Y S Y+           KGSEPVIVD V V     K  MQKVNIR R  RNP+IGDKFSS
Sbjct: 840  YCSIYNTVTGTTKATKLKGSEPVIVDYVAVDVRKPKKPMQKVNIRFRRPRNPIIGDKFSS 899

Query: 1019 RHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEF 840
            RHGQKGVCSQLWPDIDMPFS +TGM+PDLIINPHAFPSRMTIGMLLESIAAK GSL G+F
Sbjct: 900  RHGQKGVCSQLWPDIDMPFSGVTGMQPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKF 959

Query: 839  QDATPFASSVK-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFI 681
             +ATPFASSV+       S+ SS VD+LG +L S+GFNYHG EVLYSG  GTE+TCEIFI
Sbjct: 960  INATPFASSVEEDDKKSSSKSSSLVDELGSMLTSYGFNYHGVEVLYSGVLGTELTCEIFI 1019

Query: 680  GPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLL 501
            GPVYYQRLRHMVSDKFQVRSTGT+D +TRQP+           GEMERDS+LAHGAAYLL
Sbjct: 1020 GPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPIKGRKRGGGIRFGEMERDSILAHGAAYLL 1079

Query: 500  HDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKG 324
            HDRLH+CSDYHIA+VCS CGS+LT + IQ QKR + +  G+P  ++    TC+ACKT KG
Sbjct: 1080 HDRLHTCSDYHIADVCSLCGSILTTSFIQPQKRAVREFGGLPPGRIPKKVTCHACKTSKG 1139

Query: 323  METVAMPYVFRYLATELAAMNIKMELKL 240
            METVAMPYVFRYLA ELAAMNIK+ L+L
Sbjct: 1140 METVAMPYVFRYLAAELAAMNIKLTLQL 1167


>ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Oryza
            sativa Japonica Group]
          Length = 1174

 Score = 1599 bits (4140), Expect = 0.0
 Identities = 783/1156 (67%), Positives = 945/1156 (81%), Gaps = 8/1156 (0%)
 Frame = -1

Query: 3683 ASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEP 3504
            +SS +++   A +REL++PHI+SFDYFID+G++  + SIRP EI  P + T LRI   + 
Sbjct: 6    SSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRISLEKG 65

Query: 3503 RLLSPK-DAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMS 3327
             L  PK D      +YPQ+CR+ARTTY GE  V+TF Q NDG ++R   +FGYLPIMLMS
Sbjct: 66   HLFPPKRDGRLDAPLYPQQCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLPIMLMS 125

Query: 3326 KCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGD 3147
            K CHLRGAD +KLIFH EEATEMGGYFIC G+ERL R+LILQKRNYPMGL+R SF  RG 
Sbjct: 126  KLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSFVNRGA 185

Query: 3146 GYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHE 2967
            GY+DKAVI+RCV++DQSSVT+KLYYL NGSARLGFW+ GREFLLPVGIVLKALIDT+D E
Sbjct: 186  GYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDRE 245

Query: 2966 IYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIE 2787
            I+ SLT CY + Y+R KGVV TQLIGERAQIIL+EVR LSLFTR++CL H+G YF+  +E
Sbjct: 246  IFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVME 305

Query: 2786 GFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQE 2607
            GFE ++++ VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYA+VDQTA+PD  D LQ QE
Sbjct: 306  GFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQE 365

Query: 2606 VLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSV 2427
            VLLPGHLI ++LK+++ +WLRKS+R +++E TK  +F++ D  +V+KFL K+S  +G+++
Sbjct: 366  VLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAYVGKAI 425

Query: 2426 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 2247
            +SM+KVG++ + + LDLPQ+DGMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+
Sbjct: 426  QSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLL 485

Query: 2246 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 2067
            PESWGFLCPVHTPDGEPCGLLNHMTS C ++S++N+EG  KDF+ I+ S+   L+  GM+
Sbjct: 486  PESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMA 545

Query: 2066 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVP 1887
             LLP++E  GPPEVL V +DG +VGSIA +++E+ V H+R LKL   S IP+DLEVGYVP
Sbjct: 546  QLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLEVGYVP 605

Query: 1886 LSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGR- 1716
            LS GGAYPGLYLFT+P+RF+RPVR++   ++   NIELIGPFEQAFMEIRC DGGDGGR 
Sbjct: 606  LSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRN 665

Query: 1715 RSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKA 1536
            + FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA
Sbjct: 666  KLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKA 725

Query: 1535 YHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 1356
            +HLQTPQ+PIVRT +Y+KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG
Sbjct: 726  FHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRG 785

Query: 1355 HIYKTESIDLAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDX 1179
            HI++TE IDL+ +  + N  + F +SN  R T + I+SDGLP IG+ + P E YYS  + 
Sbjct: 786  HIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNN 844

Query: 1178 XXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGV 999
                      KGSEP  +D V V GT  K+ +QK NIR R +RNP+IGDKFSSRHGQKGV
Sbjct: 845  LTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGV 904

Query: 998  CSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFA 819
            CSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G+F DATPFA
Sbjct: 905  CSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFA 964

Query: 818  SSVKSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD 639
            SSVK   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM CEIF+GPVYYQRLRHMVSD
Sbjct: 965  SSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSD 1024

Query: 638  KFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAE 459
            KFQVR+TG +D ITRQP+           GEMERD++LAHGA+YLLHDRLHSCSDYHIA+
Sbjct: 1025 KFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIAD 1084

Query: 458  VCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRY 288
            VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C ACKT KGMETVAMPYVFRY
Sbjct: 1085 VCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRY 1144

Query: 287  LATELAAMNIKMELKL 240
            LA+ELAAMNIK+EL+L
Sbjct: 1145 LASELAAMNIKLELRL 1160


>ref|XP_021314715.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Sorghum bicolor]
 gb|EES04393.2| hypothetical protein SORBI_3004G019200 [Sorghum bicolor]
          Length = 1169

 Score = 1590 bits (4117), Expect = 0.0
 Identities = 778/1156 (67%), Positives = 948/1156 (82%), Gaps = 14/1156 (1%)
 Frame = -1

Query: 3653 ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-KDAM 3477
            + +RELF+PH+ESFDYF+DKG++  I SIRP  I DP +N  L+I   +  +LSP +DA 
Sbjct: 7    SALRELFRPHVESFDYFLDKGLDEMIQSIRPMVIRDPNSNNTLKIILEKGHVLSPMRDAR 66

Query: 3476 SS-RSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGAD 3300
            S    +YPQECR+AR TY GE  V+  FQYN+G  IRH  +FG+LPIMLMSK CHLRGAD
Sbjct: 67   SGVLPLYPQECRQARITYHGEFKVDVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGAD 126

Query: 3299 PQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIV 3120
            P KL+FH EEATEMGGYFIC G+ERL R+LILQKRNYPMGLVR SF  RG GY+DKAV++
Sbjct: 127  PHKLVFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLVRSSFLKRGAGYTDKAVVI 186

Query: 3119 RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCY 2940
            RCV+ DQSSV++KLYYLQNGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLT C+
Sbjct: 187  RCVQRDQSSVSMKLYYLQNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCCF 246

Query: 2939 KERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKV 2760
             +++ + KGVV TQLIGERAQI+L+EVR LSL TR+ CL HIG YF+  +EGFE ++Y+ 
Sbjct: 247  SDKHGKGKGVVSTQLIGERAQIVLDEVRNLSLLTRTQCLVHIGQYFRSVMEGFEKDDYET 306

Query: 2759 VADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 2580
            VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHLI 
Sbjct: 307  VAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNADALQYQEALLPGHLIT 366

Query: 2579 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 2400
            ++LK+++ +WLRKS+R +++E+ K   F++ +  +++KF+ K + ++ R++ESM+KVG++
Sbjct: 367  IFLKDRLQDWLRKSKRLIIEEVAKNKGFDLGNALEIRKFVTKYTSSVSRAIESMIKVGKV 426

Query: 2399 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 2220
               + LDLPQ+DGMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 427  NAQSGLDLPQRDGMTIQAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCP 486

Query: 2219 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 2040
            VHTPDGEPCGLLNHMTS C ++S++N+EG +K+F ++++ +   L+R+GM+P+LPK+E  
Sbjct: 487  VHTPDGEPCGLLNHMTSTCRISSFYNSEGVVKNFGEMKKLLSAELVRVGMNPVLPKIERT 546

Query: 2039 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAYPG 1860
            GPPEVL V LDGR++G+IA + +EKAV ++R LKL A S IP+DLEVGYVPLSF GA+PG
Sbjct: 547  GPPEVLHVHLDGRILGTIASATIEKAVNYLRTLKLLAHSGIPEDLEVGYVPLSFSGAFPG 606

Query: 1859 LYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEE 1689
            LYLFT+P+RF+RPVRN+   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 607  LYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEQFPATHEE 666

Query: 1688 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 1509
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+P
Sbjct: 667  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTP 726

Query: 1508 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 1329
            IVRT +YNKY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RGHIY+TE ID
Sbjct: 727  IVRTGTYNKYNMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECID 786

Query: 1328 LAERQEKSNPLKIFARS-NDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 1152
            L+ +   + P + FA+S   R T+S IDSDGLP +GQ V+P E YYS ++          
Sbjct: 787  LSTKSRDNVP-ETFAKSVLSRDTSSAIDSDGLPRLGQTVHPNEQYYSVHNSLTGVIRPVR 845

Query: 1151 XKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 972
             KG+EP  +D V V G G+K+ +QK NIR R +RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 846  LKGTEPAFIDYVAVNGAGSKHGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDID 905

Query: 971  MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSVKSER-- 798
            MPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSL G+F DATPFA+SVK ++  
Sbjct: 906  MPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANSVKQDKDP 965

Query: 797  ---SSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 627
               +S VD+LGP+LAS+GFNYHG EVLYSG +GTEM CEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 966  RKPNSIVDELGPMLASYGFNYHGKEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQV 1025

Query: 626  RSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 447
            R+TG +D ITRQP+           GEMERD++LAHG++YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1026 RTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSL 1085

Query: 446  CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 276
            CGSLLTAT+I+   Q+K   ++ G+P  +    F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1086 CGSLLTATMIESNNQKKAKHEMLGLPTVRPPKNFACQACKTSKGMETVAMPYVFRYLAAE 1145

Query: 275  LAAMNIKMELKLK*QS 228
            LAAMNIK+EL+L  +S
Sbjct: 1146 LAAMNIKLELRLSNKS 1161


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Vitis
            vinifera]
          Length = 1178

 Score = 1587 bits (4109), Expect = 0.0
 Identities = 791/1168 (67%), Positives = 940/1168 (80%), Gaps = 18/1168 (1%)
 Frame = -1

Query: 3689 AMASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFG 3510
            A+    T  P+   +RELF+ HI+SFD+ ++ G+E  + S++P E+VD  T  KLRI+FG
Sbjct: 6    ALEKMATAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFG 65

Query: 3509 EPRLLSPKDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLP 3342
            +P L  P+   S+R+    +YP ECR+A+ +Y G+L  +  FQY +GV+IR + + G  P
Sbjct: 66   QPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFP 125

Query: 3341 IMLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSF 3162
            IML SK CHLRGADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF
Sbjct: 126  IMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSF 185

Query: 3161 CARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALID 2982
              R +GY+DKAV++RCVREDQS+VTVKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALID
Sbjct: 186  RDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALID 245

Query: 2981 TNDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYF 2802
            T DHEIY SLT CY E+Y+  KG VGTQL+GER +IIL+EVR LSLFTR  CL+HIG++F
Sbjct: 246  TTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHF 305

Query: 2801 KPAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDV 2622
            +  ++G E E+Y +VADAVLR+Y+ VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DV
Sbjct: 306  QLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDV 365

Query: 2621 LQNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKS-SV 2445
            LQNQEVLLPGHLI +YLKEK+ EWL K+RR L DE+ K  NF       VKK + K+ S 
Sbjct: 366  LQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSR 425

Query: 2444 TIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTT 2265
             I  +VE+MLK GRL T + LDL Q+ GMT+QAERLN+LRF+SHFRAVHRGA F  +RTT
Sbjct: 426  QISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTT 485

Query: 2264 VVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVL 2085
             VRKL+PE+WGFLCPVHTPDGEPCGLLNHM S C +TSYF++ G  +DF  I+ SI +VL
Sbjct: 486  SVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVL 545

Query: 2084 IRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDL 1905
            I +GM+P LPKL  AGPPEVL V+LDGRVVGSI  SEVE AV H+RRLK+SA S+IPDDL
Sbjct: 546  IGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDL 605

Query: 1904 EVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADG 1731
            EVGY+PLS GGAYPGLYLFTSPSRF+RPVRNIS  ++  H+IELIGPFEQ +MEIRC DG
Sbjct: 606  EVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDG 665

Query: 1730 GDGGRRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRF 1554
             DGGRR+ FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+  
Sbjct: 666  SDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINC 725

Query: 1553 RTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD 1374
            R D K YHLQTPQ+PIVRT++Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD
Sbjct: 726  RADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD 785

Query: 1373 RGLCRGHIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEP 1200
            RGLC G IY+TE+IDL++   KS+   ++F RSN D+S NSLIDSDGLPY+GQM+NP EP
Sbjct: 786  RGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEP 845

Query: 1199 YYSTYDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSS 1020
            Y S Y+           KGSEPVIVD V  +    K + QKVNIR R  RNP+IGDKFSS
Sbjct: 846  YCSIYNEVTSSTRATKLKGSEPVIVDYV-ALDAKNKKHPQKVNIRFRRPRNPIIGDKFSS 904

Query: 1019 RHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEF 840
            RHGQKGVCSQLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F
Sbjct: 905  RHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKF 964

Query: 839  QDATPFASSVK-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFI 681
             DATPF+ S++       SE SS VD+LG +L S+GFNYHG EVLYSGFYGTE+TCEIFI
Sbjct: 965  VDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFI 1024

Query: 680  GPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLL 501
            GPVYYQRLRHMVSDKFQVRSTGTVD +TRQP+           GEMERDS+LAHGAAYLL
Sbjct: 1025 GPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLL 1084

Query: 500  HDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKG 324
            HDRLH+CSD+HIA+VCS CGS+LT ++IQ QKR + +I G+P  +     TC+AC+T KG
Sbjct: 1085 HDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKG 1144

Query: 323  METVAMPYVFRYLATELAAMNIKMELKL 240
            METV+MPY+FR+LA ELAAMNIKM L+L
Sbjct: 1145 METVSMPYIFRFLAAELAAMNIKMTLQL 1172


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
 ref|XP_010659084.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
          Length = 1169

 Score = 1586 bits (4106), Expect = 0.0
 Identities = 790/1162 (67%), Positives = 938/1162 (80%), Gaps = 18/1162 (1%)
 Frame = -1

Query: 3671 TEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLS 3492
            T  P+   +RELF+ HI+SFD+ ++ G+E  + S++P E+VD  T  KLRI+FG+P L  
Sbjct: 3    TAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYP 62

Query: 3491 PKDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSK 3324
            P+   S+R+    +YP ECR+A+ +Y G+L  +  FQY +GV+IR + + G  PIML SK
Sbjct: 63   PQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSK 122

Query: 3323 CCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDG 3144
             CHLRGADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF  R +G
Sbjct: 123  LCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREG 182

Query: 3143 YSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEI 2964
            Y+DKAV++RCVREDQS+VTVKLYYL+NGSARLGFWI+GRE+LLPVG+VLKALIDT DHEI
Sbjct: 183  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 242

Query: 2963 YVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEG 2784
            Y SLT CY E+Y+  KG VGTQL+GER +IIL+EVR LSLFTR  CL+HIG++F+  ++G
Sbjct: 243  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 302

Query: 2783 FETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEV 2604
             E E+Y +VADAVLR+Y+ VHL +N+DKFNLLIFM+QKL++L+DQT+ PDN DVLQNQEV
Sbjct: 303  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 362

Query: 2603 LLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKS-SVTIGRSV 2427
            LLPGHLI +YLKEK+ EWL K+RR L DE+ K  NF       VKK + K+ S  I  +V
Sbjct: 363  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAV 422

Query: 2426 ESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLM 2247
            E+MLK GRL T + LDL Q+ GMT+QAERLN+LRF+SHFRAVHRGA F  +RTT VRKL+
Sbjct: 423  ENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 482

Query: 2246 PESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMS 2067
            PE+WGFLCPVHTPDGEPCGLLNHM S C +TSYF++ G  +DF  I+ SI +VLI +GM+
Sbjct: 483  PEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMT 542

Query: 2066 PLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVP 1887
            P LPKL  AGPPEVL V+LDGRVVGSI  SEVE AV H+RRLK+SA S+IPDDLEVGY+P
Sbjct: 543  PALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIP 602

Query: 1886 LSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR 1713
            LS GGAYPGLYLFTSPSRF+RPVRNIS  ++  H+IELIGPFEQ +MEIRC DG DGGRR
Sbjct: 603  LSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRR 662

Query: 1712 S-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKA 1536
            + FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQA+  R D K 
Sbjct: 663  NIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKL 722

Query: 1535 YHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRG 1356
            YHLQTPQ+PIVRT++Y KY +DEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC G
Sbjct: 723  YHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHG 782

Query: 1355 HIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYD 1182
             IY+TE+IDL++   KS+   ++F RSN D+S NSLIDSDGLPY+GQM+NP EPY S Y+
Sbjct: 783  QIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYN 842

Query: 1181 XXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKG 1002
                       KGSEPVIVD V  +    K + QKVNIR R  RNP+IGDKFSSRHGQKG
Sbjct: 843  EVTSSTRATKLKGSEPVIVDYV-ALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 901

Query: 1001 VCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPF 822
            VCSQLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLES+AAK GSL G+F DATPF
Sbjct: 902  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 961

Query: 821  ASSVK-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQ 663
            + S++       SE SS VD+LG +L S+GFNYHG EVLYSGFYGTE+TCEIFIGPVYYQ
Sbjct: 962  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 1021

Query: 662  RLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHS 483
            RLRHMVSDKFQVRSTGTVD +TRQP+           GEMERDS+LAHGAAYLLHDRLH+
Sbjct: 1022 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHT 1081

Query: 482  CSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTFTCNACKTRKGMETVAM 306
            CSD+HIA+VCS CGS+LT ++IQ QKR + +I G+P  +     TC+AC+T KGMETV+M
Sbjct: 1082 CSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSM 1141

Query: 305  PYVFRYLATELAAMNIKMELKL 240
            PY+FR+LA ELAAMNIKM L+L
Sbjct: 1142 PYIFRFLAAELAAMNIKMTLQL 1163


>ref|XP_008664805.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]
          Length = 1178

 Score = 1580 bits (4092), Expect = 0.0
 Identities = 776/1159 (66%), Positives = 942/1159 (81%), Gaps = 14/1159 (1%)
 Frame = -1

Query: 3653 ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSPKDAMS 3474
            + +RELF+PH+ESFDYF+DKG++  I SIRP  I DP ++  L+I   +  +LSP     
Sbjct: 19   SALRELFRPHVESFDYFLDKGLDEMIESIRPMVIRDPNSSNTLKIILEKGHVLSPMRGAR 78

Query: 3473 SR--SIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGAD 3300
                 IYPQECR+AR +Y GE  VE  FQYN+G  IRH  +FG+LPIMLMSK CHLRGAD
Sbjct: 79   PGVLPIYPQECRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGAD 138

Query: 3299 PQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIV 3120
            P KL+FH EEATEMGGYFIC G+ERL R+L+LQKRNYPMGLVR SF  RG GY+DKAV++
Sbjct: 139  PHKLVFHGEEATEMGGYFICGGMERLVRILVLQKRNYPMGLVRNSFLKRGAGYTDKAVVI 198

Query: 3119 RCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCY 2940
            RCV+ DQSSVT+KLYY+ NGSARLGFW+ GREFLLPVGIVLKALID +D EI+ SLT CY
Sbjct: 199  RCVQRDQSSVTIKLYYILNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCCY 258

Query: 2939 KERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKV 2760
             +++ R KGVV TQLIGERAQI+L+EVR LS+ TR+ CL HIG YF+  +EGFE ++Y  
Sbjct: 259  SDKHGRGKGVVSTQLIGERAQIVLDEVRNLSILTRTQCLVHIGQYFRSVMEGFENDDYIT 318

Query: 2759 VADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIA 2580
            VA+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHL  
Sbjct: 319  VAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGHLFT 378

Query: 2579 LYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRL 2400
            ++LK+++ EWLRKS+R +L+E  K   F++ +  +++KFL K + ++GR+VESM+KVG +
Sbjct: 379  VFLKDRLQEWLRKSKRLILEEAAKNKGFDLGNALEIRKFLTKYTTSVGRAVESMIKVGNV 438

Query: 2399 ATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCP 2220
             + + LDLPQ++GMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCP
Sbjct: 439  NSRSGLDLPQREGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCP 498

Query: 2219 VHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHA 2040
            VHTPDGEPCGLLNHMTS C V+S++N+EG IK+F ++++ +   L+R+GM+P+LPK+E  
Sbjct: 499  VHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNFGEMKKLLSAELVRVGMNPVLPKIEQT 558

Query: 2039 GPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAYPG 1860
            GPPEVL V LDG ++G+IA + +EKAV ++R LKL A S IP+DLEVGYVP SF GA+PG
Sbjct: 559  GPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLKLLAHSGIPEDLEVGYVPPSFNGAFPG 618

Query: 1859 LYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-FPATHEE 1689
            LYLFT+P+RF+RPVRN+   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEE
Sbjct: 619  LYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEPFPATHEE 678

Query: 1688 IHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSP 1509
            IHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+P
Sbjct: 679  IHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTP 738

Query: 1508 IVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESID 1329
            IVRT +Y KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+V+RG+ RGHIY+TE ID
Sbjct: 739  IVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECID 798

Query: 1328 LAERQEKSNPLKIFARS-NDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXX 1152
            L+ +   + P + FA+S   R T+++IDSDGLP +GQ V+P E YYS ++          
Sbjct: 799  LSTKSRDNVP-ETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYSVHNSLTNVIRPVK 857

Query: 1151 XKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDID 972
             KG+EP  +D V V GTG+K  +QK NIR R +RNP+IGDKFSSRHGQKGVCSQLWPDID
Sbjct: 858  LKGTEPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDID 917

Query: 971  MPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSVKSERSS 792
            MPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAKAGSL G+F DATPFA+S+K ++ S
Sbjct: 918  MPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANSLKKDKDS 977

Query: 791  Q-----VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 627
                  VD+LGP+LAS+GFNYHG+EVLYSG +GTEM CEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 978  DKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQV 1037

Query: 626  RSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 447
            R+TG +D ITRQP+           GEMERD++LAHG++YLLHDRLHSCSDYHIA+VCSF
Sbjct: 1038 RTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSF 1097

Query: 446  CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 276
            CGSLLTAT+I+   Q+K   ++ G+P  + +  F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1098 CGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAE 1157

Query: 275  LAAMNIKMELKLK*QSWGP 219
            LAAMNIK+EL+L  +S  P
Sbjct: 1158 LAAMNIKLELRLSNKSGLP 1176


>gb|PKA48040.1| DNA-directed RNA polymerase II subunit RPB2 [Apostasia shenzhenica]
          Length = 1171

 Score = 1569 bits (4063), Expect = 0.0
 Identities = 775/1158 (66%), Positives = 931/1158 (80%), Gaps = 18/1158 (1%)
 Frame = -1

Query: 3659 NNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-KD 3483
            N A++REL + H+ESFDYF+D+G+  A+  IRP +IVD TT + L+I+  +  L  P K+
Sbjct: 8    NYASLRELVRHHVESFDYFLDEGLAKALMEIRPCKIVDKTTGSILKIFVEKHYLYPPTKE 67

Query: 3482 AMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGA 3303
               +  IYP ECR+  T+YRGE  +E   QY+ GV +R ++SFG+LPIMLMSK CHL+G 
Sbjct: 68   GRRNEPIYPAECRQTMTSYRGEFKIEVGLQYDGGVVVREKISFGHLPIMLMSKLCHLKGV 127

Query: 3302 DPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVI 3123
            DPQ+L+ HKEEA+E+GGYFICNGLERL R+L++QKRN+P+ LVR++F  RGDG+SDKAV 
Sbjct: 128  DPQRLVHHKEEASEVGGYFICNGLERLGRVLMIQKRNHPVSLVRRNFRGRGDGFSDKAVR 187

Query: 3122 VRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSC 2943
            +RCVREDQSSV   LYYLQNGSAR GF I G+E+LLPVG+VLKALIDT+DHEIYVSLT C
Sbjct: 188  IRCVREDQSSVNFSLYYLQNGSARAGFRILGKEYLLPVGLVLKALIDTSDHEIYVSLTCC 247

Query: 2942 YKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYK 2763
            Y E+++ +KG VGTQL+GERAQIIL+E+R LSL TRS CLKHIG++F+P +   + E+  
Sbjct: 248  YSEKFRNDKGAVGTQLVGERAQIILDELRSLSLMTRSQCLKHIGNHFRPVLSRLDAESDT 307

Query: 2762 VVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLI 2583
               +AVLRDYVLVHL SNHDKFNLLIFMLQKL+ALVDQTAAPD+ D LQN EVLL GH++
Sbjct: 308  AFGEAVLRDYVLVHLNSNHDKFNLLIFMLQKLFALVDQTAAPDHVDALQNMEVLLIGHVM 367

Query: 2582 ALYLKEKVVEWLRKSRRQLLDEMTK-ANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVG 2406
             +Y+KEK+  WL K +R ++DEM + A +F+  D  ++KK + + +  + RS+ES++KVG
Sbjct: 368  TVYIKEKLEAWLEKGKRLIIDEMNRNAQDFDFRDLHKMKKIVSRYASAVSRSIESLIKVG 427

Query: 2405 RLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFL 2226
            R+ TL  LDLPQ +G+TIQAERLNYLRFISHFR+VHRGA F KMRTT VRKL+PESWGFL
Sbjct: 428  RVVTLTGLDLPQTEGLTIQAERLNYLRFISHFRSVHRGASFAKMRTTTVRKLLPESWGFL 487

Query: 2225 CPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLE 2046
            CPVHTPDG PCGLLNH+ S C + S+++  G +KDF  I+ SI +VLI LGM+PLLP++E
Sbjct: 488  CPVHTPDGIPCGLLNHLASTCRIASFYDRNGLLKDFAKIRMSILSVLIGLGMTPLLPRVE 547

Query: 2045 HAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAY 1866
            H GPPEVL VLLDG V+GS+A   ++KAV H+R LKLS++S IPDDLEVGYVPLS GGAY
Sbjct: 548  HTGPPEVLHVLLDGCVIGSMASDNLDKAVWHLRSLKLSSSSGIPDDLEVGYVPLSEGGAY 607

Query: 1865 PGLYLFTSPSRFIRPVRNISHAT--DHNIELIGPFEQAFMEIRCADGGDGGRR-SFPATH 1695
            PGLYLF SPSRFIRPV+NIS +   D N+EL+GPFEQAFMEI C D GDGGRR SFPATH
Sbjct: 608  PGLYLFCSPSRFIRPVKNISISAVCDTNVELVGPFEQAFMEISCPDNGDGGRRESFPATH 667

Query: 1694 EEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQ 1515
            EEIHPT ILSV+ANLTPWSDHNQSPRNMYQCQMAKQTMGFS QAL+FR D K YHLQTPQ
Sbjct: 668  EEIHPTAILSVIANLTPWSDHNQSPRNMYQCQMAKQTMGFSGQALQFRADNKTYHLQTPQ 727

Query: 1514 SPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTES 1335
            SPIVRT SY K+C+DEFPTG NAIVAVLAYSGYDMEDAMILNKSSV+RGL RGHIY+TE+
Sbjct: 728  SPIVRTASYTKFCVDEFPTGANAIVAVLAYSGYDMEDAMILNKSSVERGLFRGHIYQTET 787

Query: 1334 IDLAERQEKSNP-LKIFARSNDRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXX 1158
            IDLA +++ +   L+IF+R  ++   S +DSDGLP++GQ + P  P YS+Y+        
Sbjct: 788  IDLANKKKGAEKVLEIFSRGTNKGLQSSVDSDGLPFVGQTIQPGGPKYSSYNTLTSTTST 847

Query: 1157 XXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPD 978
               KGSE +IVD + V G+ TKNY+QKVN+R+R +RNPVIGDKFSSRHGQKGVCSQLWPD
Sbjct: 848  SLLKGSESLIVDYIAVDGSATKNYIQKVNLRSRRVRNPVIGDKFSSRHGQKGVCSQLWPD 907

Query: 977  IDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSV---- 810
            +DMPFSA+TG+RPDLIINPHAFPSRMTIGMLLESIAAK GSL G+F DATPFASS     
Sbjct: 908  VDMPFSAVTGIRPDLIINPHAFPSRMTIGMLLESIAAKGGSLQGKFVDATPFASSTLKND 967

Query: 809  ---KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSD 639
                SE+ S VD++GPILAS+GFNYHG EVLYSG  GTE+TCEIFIGPVYYQRLRHMVSD
Sbjct: 968  ADKSSEKVSLVDEIGPILASYGFNYHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSD 1027

Query: 638  KFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAE 459
            KFQVRSTG VD ITRQP+           GEMERDS+LAHGAAYLLHDRLHS SDYHIA+
Sbjct: 1028 KFQVRSTGAVDQITRQPIGGRKRGGGIRFGEMERDSILAHGAAYLLHDRLHSSSDYHIAD 1087

Query: 458  VCSFCGSLLTATVIQQQKRLL-----DIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVF 294
            VCS CGSLLT+T++Q QKR        +P +         TC  CK+ K METVAMPYVF
Sbjct: 1088 VCSQCGSLLTSTIVQPQKREFRDVKSGLPPLRSGSSEKNATCVYCKSSKRMETVAMPYVF 1147

Query: 293  RYLATELAAMNIKMELKL 240
            R+LA ELAAMN+K++++L
Sbjct: 1148 RFLAAELAAMNVKLDIRL 1165


>ref|XP_006661904.2| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Oryza
            brachyantha]
          Length = 1177

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 777/1152 (67%), Positives = 934/1152 (81%), Gaps = 14/1152 (1%)
 Frame = -1

Query: 3653 ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSPKD-AM 3477
            A +RELF+PHI+SFDYFID+G++  + SIRP EI    ++  LRI   +  L  PK    
Sbjct: 15   AALRELFRPHIDSFDYFIDEGLDKMLLSIRPLEISVHGSSVTLRISLEKGHLFPPKSYGR 74

Query: 3476 SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 3297
                +YPQ+CR+ RT+Y GE  V+ F Q NDG SIR   SFG+LPIMLMSK CHLRGADP
Sbjct: 75   LDAPLYPQQCRQTRTSYHGEFKVDAFIQCNDGPSIRETFSFGHLPIMLMSKLCHLRGADP 134

Query: 3296 QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 3117
            +KLIF  EEATEMGGYFIC G+ERL R+LIL KRNYPMGL+R +F  RG GY+D+AV++R
Sbjct: 135  EKLIFLGEEATEMGGYFICAGMERLVRILILLKRNYPMGLIRGAFVNRGAGYTDQAVVIR 194

Query: 3116 CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 2937
            CV++DQSSVT+KLYYL NGSARLGFW+  REFLLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 195  CVQDDQSSVTIKLYYLLNGSARLGFWLGAREFLLPVGIVLKALIDTSDWEIFTSLTCCYS 254

Query: 2936 ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 2757
            + Y+  KGVV T LI +RAQIIL+EVR LSLFTR++CL HIG YF+  +EGFE ++++ V
Sbjct: 255  DHYRTGKGVVSTPLIADRAQIILDEVRVLSLFTRTECLLHIGKYFRSVMEGFEKDDFETV 314

Query: 2756 ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 2577
            A+AVL+DY+ VHL +NHDKFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPGHLI +
Sbjct: 315  AEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYALVDQTASPDNADALQYQEALLPGHLITV 374

Query: 2576 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 2397
            +LK+++ +WLRKS+R +++E TK  +F++ +  +V++FL K+S  +GR++ESM+KVG++ 
Sbjct: 375  FLKDRLQDWLRKSKRLIVEEATKNKSFDLSNSREVRRFLSKTSQYVGRAIESMIKVGKVN 434

Query: 2396 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 2217
            + + LDLPQ+DGMTI AERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 435  SQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPV 494

Query: 2216 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 2037
            HTPDGEPCGLLNHMTS C V+S++N+ G IKDF+ I+ S+   L+  GM+ LLP++E  G
Sbjct: 495  HTPDGEPCGLLNHMTSTCRVSSFYNSGGAIKDFQKIKMSLIAHLVGAGMAQLLPRIERTG 554

Query: 2036 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAYPGL 1857
            PPEVL V LDG +VGSIA +++E+ V ++R LKL A S IP+DLEVGYVPLS GGAYPGL
Sbjct: 555  PPEVLHVHLDGCIVGSIAAAKIEEVVNYLRSLKLLAHSGIPEDLEVGYVPLSLGGAYPGL 614

Query: 1856 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRRS-FPATHEEI 1686
            YLFT+P+RFIRPVR++   +D   +IELIGPFEQAFMEIRC DGGDGGR+  FPATHEEI
Sbjct: 615  YLFTNPARFIRPVRSLLGLSDGGPSIELIGPFEQAFMEIRCPDGGDGGRKELFPATHEEI 674

Query: 1685 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 1506
            HPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQ+PI
Sbjct: 675  HPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPI 734

Query: 1505 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 1326
            VRT +Y+KYC+DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RGHIY+TE IDL
Sbjct: 735  VRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDL 794

Query: 1325 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 1149
            +E+  + N ++ F +SN  R T ++IDSDGLP IG+ + P E YYS  +           
Sbjct: 795  SEK-SRDNAVEFFCKSNLLRDTTAVIDSDGLPCIGEKIFPNEQYYSVCNNLTGVVRPVKL 853

Query: 1148 KGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 969
            KGSEP  +D V V GT  KN +QK N+R R +RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 854  KGSEPAAIDYVAVNGTNFKNRLQKANVRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDM 913

Query: 968  PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSVKSE---- 801
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G+F DATPF+SSV+      
Sbjct: 914  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLTGKFMDATPFSSSVEKRDENS 973

Query: 800  --RSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 627
               +S VD+LGP+LAS+GFNYHG+EVLYSG +GTEM CEIF+GPVYYQRLRHMVSDKFQV
Sbjct: 974  CTSNSIVDELGPMLASYGFNYHGTEVLYSGVFGTEMNCEIFLGPVYYQRLRHMVSDKFQV 1033

Query: 626  RSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 447
            R+TG +D ITRQPV           GEMERD+VLAHGA+YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1034 RTTGRIDQITRQPVGGRKFGGGIRFGEMERDAVLAHGASYLLHDRLHSCSDYHIADVCSL 1093

Query: 446  CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 276
            CGSLLTATVI+   Q+K   D+ G+P  + +  F C ACKT KGMETVAMPYVFRYLA E
Sbjct: 1094 CGSLLTATVIKSESQKKAKQDMLGLPTVRPAKNFACQACKTTKGMETVAMPYVFRYLAAE 1153

Query: 275  LAAMNIKMELKL 240
            LAAMNIK+EL+L
Sbjct: 1154 LAAMNIKLELRL 1165


>ref|XP_010067710.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1
            [Eucalyptus grandis]
 gb|KCW65881.1| hypothetical protein EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1173

 Score = 1566 bits (4056), Expect = 0.0
 Identities = 784/1168 (67%), Positives = 935/1168 (80%), Gaps = 19/1168 (1%)
 Frame = -1

Query: 3686 MASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGE 3507
            M ++K +  +   +RELF+ HIESFD+ +D+G+E  ++ I+P +I DP+++  L+I+F +
Sbjct: 1    MGATKADAADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAK 60

Query: 3506 PRLLSPKDAMSSRS----IYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPI 3339
            P +  P+   SS++    + P ECR+A+T+Y G+  V  +FQY+D V++  + +FG+LPI
Sbjct: 61   PEVYQPQKEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPI 120

Query: 3338 MLMSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFC 3159
            ML SK C+L GADPQKL+  KEE++EMGGYFI NGLER+ RLLIL KRNYPM +VR SF 
Sbjct: 121  MLKSKLCYLNGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFR 180

Query: 3158 ARGDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDT 2979
             R +GY+DKAV++RCVREDQSSVTVKLYYLQNGSARLGFWI+ RE+LLPVG+VLKALIDT
Sbjct: 181  DRREGYTDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDT 240

Query: 2978 NDHEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFK 2799
            NDHEIY SLTSCY E+Y R KGVVG QL+ ERA+IIL+E+R L+LFTR  CL+HIG++F+
Sbjct: 241  NDHEIYSSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQ 300

Query: 2798 PAIEGFETENYKVVADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVL 2619
            P ++G E E++  VA+AVL+DY+ VHL +N+DKFNLLIFM+QKL++L+DQT++PDN D L
Sbjct: 301  PVMDGLENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSL 360

Query: 2618 QNQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEM-TKANNFNIIDPDQVKKFLGKS-SV 2445
            QNQEVLLPGHLI +YLK+K+ +WL+K+++ L DE+  KA NF+      VKK + K+   
Sbjct: 361  QNQEVLLPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGR 420

Query: 2444 TIGRSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTT 2265
             IG ++E+MLK GRL T + LDL Q+ G T+QAERLN+LRF+SHFRAVHRGA F  +RTT
Sbjct: 421  QIGSAIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTT 480

Query: 2264 VVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVL 2085
             VRKL+PESWGFLCPVHTPDGEPCGLLNHMT  C +TS+F+++G  +DF  I+ SI NVL
Sbjct: 481  SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVL 540

Query: 2084 IRLGMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDL 1905
            I +GM+P LPK+  AGPP+VL VLLDGRVVGSI  +EVEKAV+++RRLKLS TS IPDDL
Sbjct: 541  IGIGMTPSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDL 600

Query: 1904 EVGYVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADG 1731
            EVGYVPLSFGGAYPGLYLFT+PSRF RPVRNIS   D   NIELIGPFEQ FMEIRC DG
Sbjct: 601  EVGYVPLSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDG 660

Query: 1730 GDGGRRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRF 1554
            GDGGRR+ FPATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQA+ F
Sbjct: 661  GDGGRRNEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHF 720

Query: 1553 RTDVKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVD 1374
            R D K YHLQTPQ+PIVRT +Y KYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSV+
Sbjct: 721  RADQKLYHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVE 780

Query: 1373 RGLCRGHIYKTESIDLAERQEKSN-PLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEP 1200
            RG+  G IY+TE+IDL+E+  KS+   ++F RSN D+S +  IDSDGLPY+GQM+ P EP
Sbjct: 781  RGMFHGQIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEP 840

Query: 1199 YYSTYDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSS 1020
            Y S Y+           KGSE  IVD V  V T TK  +QK NIR R  RNPVIGDKFSS
Sbjct: 841  YCSVYNEVTTTTKNHLRKGSESAIVDYV-AVDTKTKKGLQKANIRFRHPRNPVIGDKFSS 899

Query: 1019 RHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEF 840
            RHGQKGVCSQLWPD+DMPFS ITGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GEF
Sbjct: 900  RHGQKGVCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEF 959

Query: 839  QDATPFASSV-------KSERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFI 681
             DATPFASS        KSE    VD++G  L   GFNYHG EVLYSG YGTE+TCEIFI
Sbjct: 960  VDATPFASSTKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFI 1019

Query: 680  GPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLL 501
            GPVYYQRLRHMVSDKFQVRSTGTVD +TRQP+           GEMERDS++AHGAAYLL
Sbjct: 1020 GPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLL 1079

Query: 500  HDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRL-LDIPGIPQAKVSPTFTCNACKTRKG 324
            HDRLH+CSDYHIA+VCS CGS+LT   +Q Q+R   +I G+P  +     TC+AC+T +G
Sbjct: 1080 HDRLHTCSDYHIADVCSLCGSILTTQFVQPQRRPGREIGGLPPIRAPKKVTCHACQTSRG 1139

Query: 323  METVAMPYVFRYLATELAAMNIKMELKL 240
            METVAMPYVFRYLA ELAAMNIKM L L
Sbjct: 1140 METVAMPYVFRYLAAELAAMNIKMTLHL 1167


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Brachypodium
            distachyon]
 gb|KQJ97293.1| hypothetical protein BRADI_3g29917v3 [Brachypodium distachyon]
          Length = 1181

 Score = 1558 bits (4033), Expect = 0.0
 Identities = 767/1152 (66%), Positives = 935/1152 (81%), Gaps = 14/1152 (1%)
 Frame = -1

Query: 3653 ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-KDAM 3477
            AT+REL++PHIESFDYF+D+G++  + SIRP +I  P+++  LRI   +  LL P +D  
Sbjct: 21   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRDVR 80

Query: 3476 SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 3297
             ++ +YPQECR+AR +Y GE  V+T FQ+N+G  +R   +FG+LPIMLMSK CHLRGAD 
Sbjct: 81   MAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGADS 140

Query: 3296 QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 3117
            +KLI+H EEATEMGGYFI  G+ERL R+L+LQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 141  RKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVVIR 200

Query: 3116 CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 2937
            CV++DQ+SVTVKLYYLQNGSARLGFW+  RE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 201  CVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCCYS 260

Query: 2936 ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 2757
            ++Y+R KGVV  QLIGERAQIIL+EVR LSL TR+ CL+HIG YF+ A+EGFE ++Y+ V
Sbjct: 261  DKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQTV 320

Query: 2756 ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 2577
            A+AVL+DYVLVHL +NH KFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPG+LI +
Sbjct: 321  AEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLITV 380

Query: 2576 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 2397
            +LK+++ +WLRKS+R +++E TK  +F   +  +++KFL K S ++GR++ES++K+GR  
Sbjct: 381  FLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGRAN 440

Query: 2396 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 2217
            + + LDLPQ++GM+IQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 441  SQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLCPV 500

Query: 2216 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 2037
            HTPDGEPCGLLNHMTSAC ++S++++EG +KDF  I+  +   L+R GM PL PK+EH G
Sbjct: 501  HTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEHTG 560

Query: 2036 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAYPGL 1857
            PPEVL V LDG +VGSI  +++E+ V +IRRLKL A    P+DLEVGYVPLS GGAYPGL
Sbjct: 561  PPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYPGL 620

Query: 1856 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEEI 1686
            Y FTSP+RF+RPV+N+    D   +IELIG FEQAFMEIRC DGGDGGR+ SFPATHEEI
Sbjct: 621  YFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHEEI 680

Query: 1685 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 1506
            HPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQSPI
Sbjct: 681  HPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQSPI 740

Query: 1505 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 1326
            VRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG IY+TE IDL
Sbjct: 741  VRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECIDL 800

Query: 1325 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 1149
            +  + + +  +IFA+S+  R ++S+IDSDGLP +G+ + P E YYSTY+           
Sbjct: 801  STTR-RGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPTRL 859

Query: 1148 KGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 969
            KG+EP  +D V V GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 860  KGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDM 919

Query: 968  PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATPFASSVKS----- 804
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAKAGSL G F DATPFASSVK      
Sbjct: 920  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASSVKEGDGNP 979

Query: 803  -ERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQV 627
             +  S VD++GP+LAS+GFNYHG EVLYSG +GTE+TCEIFIGPVYYQRLRHMVSDKFQV
Sbjct: 980  WKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRHMVSDKFQV 1039

Query: 626  RSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSF 447
            R+TG +D +TRQP+           GEMERD++LAHGA+YLLHDRLHSCSDYHIA+VCS 
Sbjct: 1040 RTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSL 1099

Query: 446  CGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETVAMPYVFRYLATE 276
            CGSLLTATVI+   Q K   ++ G+   K      C AC+T KGMETVAMPYVFRYLA E
Sbjct: 1100 CGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKGMETVAMPYVFRYLAAE 1159

Query: 275  LAAMNIKMELKL 240
            LAAMN+K++L+L
Sbjct: 1160 LAAMNVKLDLRL 1171


>ref|XP_020150651.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Aegilops tauschii
            subsp. tauschii]
          Length = 1187

 Score = 1555 bits (4027), Expect = 0.0
 Identities = 769/1165 (66%), Positives = 943/1165 (80%), Gaps = 15/1165 (1%)
 Frame = -1

Query: 3689 AMASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFG 3510
            A A++  ++ + AT+REL++PHIESFDYF+D+G++  + SIRP EI DP++N  LR+   
Sbjct: 11   AAAAAAGKEEDYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITDPSSNATLRMSLE 70

Query: 3509 EPRLLSP-KDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIML 3333
            +  +L P KD    + +YPQECR+ R +Y GE  VE  FQ+NDG  IR   +FG+LPIML
Sbjct: 71   KGHVLPPMKDGRLEQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQTFNFGHLPIML 130

Query: 3332 MSKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCAR 3153
            MSK CHLRGADP KLI+H EEATEMGGYFI  GLERL R+LILQKRNYPMG+VR +F  R
Sbjct: 131  MSKLCHLRGADPCKLIYHGEEATEMGGYFISGGLERLIRILILQKRNYPMGMVRGAFIKR 190

Query: 3152 GDGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTND 2973
            G GY+DKAV++RCV  DQSSVTVKLYYLQNGSARLGFW  GRE LLPVGIVLKALIDT+D
Sbjct: 191  GAGYTDKAVVMRCVHHDQSSVTVKLYYLQNGSARLGFWFAGREILLPVGIVLKALIDTSD 250

Query: 2972 HEIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPA 2793
             EI+ SLT CY ++ +R KGVV TQLIGER QIIL+EVR LSLFTR+ CL HIG YF+ A
Sbjct: 251  REIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCLVHIGKYFRSA 310

Query: 2792 IEGFETENYKVVADAVLRDYVLVHLTS-NHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQ 2616
            +EGFE ++Y+ VA+AV++D++LVHL + NH KFNLLIFMLQKLYALVDQT +PDN D LQ
Sbjct: 311  MEGFEKDDYETVAEAVIKDHILVHLQNDNHAKFNLLIFMLQKLYALVDQTTSPDNPDALQ 370

Query: 2615 NQEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIG 2436
             QE LLPGHLI ++LK+++ +WL+KS+R +++E+TK  +F + +  +++KFL K + ++G
Sbjct: 371  FQEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRKFLSKYTTSVG 430

Query: 2435 RSVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVR 2256
            R++E+++KVGR  + + LDLPQ++GMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VR
Sbjct: 431  RAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSSFAKMRTTTVR 490

Query: 2255 KLMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRL 2076
            KL+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S +N+EG IKDF+ I+  +   L+R 
Sbjct: 491  KLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIKDKLLVELVRG 550

Query: 2075 GMSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVG 1896
            GM PLLPK+EH GPPEVL V LDG +VGSIA +++E+ V ++RRLKL A    P+DLEVG
Sbjct: 551  GMIPLLPKMEHTGPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAHPATPEDLEVG 610

Query: 1895 YVPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDHN--IELIGPFEQAFMEIRCADGGDG 1722
            YVPLS GGAYPGLYLFTSP+RF+RPV+N+    D    IELIGPFEQAFMEIRC DGGDG
Sbjct: 611  YVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGETRIELIGPFEQAFMEIRCPDGGDG 670

Query: 1721 GRRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTD 1545
            GR+  FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL++RTD
Sbjct: 671  GRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKYRTD 730

Query: 1544 VKAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGL 1365
            VKA+HLQTPQSPIVRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+
Sbjct: 731  VKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGM 790

Query: 1364 CRGHIYKTESIDLAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYST 1188
             RG I++TE IDL+ ++ ++ P +IFA+S   R T+++IDSDGLP +G+ V P E YYS 
Sbjct: 791  FRGDIFQTECIDLSAKRTENVP-EIFAKSPLSRDTDNVIDSDGLPRVGETVVPYEQYYSI 849

Query: 1187 YDXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQ 1008
            Y+           KG+EP  +D V + GT +K  +QKVNIR R  RNP+IGDKFSSRHGQ
Sbjct: 850  YNTLTGAIRPVRLKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQ 909

Query: 1007 KGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDAT 828
            KGVCSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTI ML+ESIAAKAGS+ G+F DAT
Sbjct: 910  KGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGSVHGKFIDAT 969

Query: 827  PFASSVKSERSSQ------VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYY 666
            PFASSVK +  ++      VD+LGP+LAS+GFN+HG+EVLYSG +GTE+  EIFIGPVYY
Sbjct: 970  PFASSVKEDGENRCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFIGPVYY 1029

Query: 665  QRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLH 486
            QRLRHMVSDKFQVR+TG +D +T+QP+           GEMERD++LAHGA+YLLHDRLH
Sbjct: 1030 QRLRHMVSDKFQVRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLH 1089

Query: 485  SCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMET 315
            +CSDYH+A+VCS CGSLL+ATVI+   Q+K    + G+   + +  FTC AC+T KGMET
Sbjct: 1090 TCSDYHVADVCSLCGSLLSATVIKSDTQKKSKRHLLGVNTVRPAKNFTCQACQTNKGMET 1149

Query: 314  VAMPYVFRYLATELAAMNIKMELKL 240
            VAMPYVFRYLA ELAAMNIK++L+L
Sbjct: 1150 VAMPYVFRYLAAELAAMNIKLDLRL 1174


>ref|XP_020150652.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Aegilops tauschii
            subsp. tauschii]
          Length = 1176

 Score = 1554 bits (4024), Expect = 0.0
 Identities = 768/1164 (65%), Positives = 942/1164 (80%), Gaps = 15/1164 (1%)
 Frame = -1

Query: 3686 MASSKTEKPNNATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGE 3507
            M ++  ++ + AT+REL++PHIESFDYF+D+G++  + SIRP EI DP++N  LR+   +
Sbjct: 1    MPTAAGKEEDYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITDPSSNATLRMSLEK 60

Query: 3506 PRLLSP-KDAMSSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLM 3330
              +L P KD    + +YPQECR+ R +Y GE  VE  FQ+NDG  IR   +FG+LPIMLM
Sbjct: 61   GHVLPPMKDGRLEQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQTFNFGHLPIMLM 120

Query: 3329 SKCCHLRGADPQKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARG 3150
            SK CHLRGADP KLI+H EEATEMGGYFI  GLERL R+LILQKRNYPMG+VR +F  RG
Sbjct: 121  SKLCHLRGADPCKLIYHGEEATEMGGYFISGGLERLIRILILQKRNYPMGMVRGAFIKRG 180

Query: 3149 DGYSDKAVIVRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDH 2970
             GY+DKAV++RCV  DQSSVTVKLYYLQNGSARLGFW  GRE LLPVGIVLKALIDT+D 
Sbjct: 181  AGYTDKAVVMRCVHHDQSSVTVKLYYLQNGSARLGFWFAGREILLPVGIVLKALIDTSDR 240

Query: 2969 EIYVSLTSCYKERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAI 2790
            EI+ SLT CY ++ +R KGVV TQLIGER QIIL+EVR LSLFTR+ CL HIG YF+ A+
Sbjct: 241  EIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCLVHIGKYFRSAM 300

Query: 2789 EGFETENYKVVADAVLRDYVLVHLTS-NHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQN 2613
            EGFE ++Y+ VA+AV++D++LVHL + NH KFNLLIFMLQKLYALVDQT +PDN D LQ 
Sbjct: 301  EGFEKDDYETVAEAVIKDHILVHLQNDNHAKFNLLIFMLQKLYALVDQTTSPDNPDALQF 360

Query: 2612 QEVLLPGHLIALYLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGR 2433
            QE LLPGHLI ++LK+++ +WL+KS+R +++E+TK  +F + +  +++KFL K + ++GR
Sbjct: 361  QEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRKFLSKYTTSVGR 420

Query: 2432 SVESMLKVGRLATLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRK 2253
            ++E+++KVGR  + + LDLPQ++GMTIQAERLN+ R+ISHFR+VHRG+ F KMRTT VRK
Sbjct: 421  AIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSSFAKMRTTTVRK 480

Query: 2252 LMPESWGFLCPVHTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLG 2073
            L+PESWGFLCPVHTPDGEPCGLLNHMTS C ++S +N+EG IKDF+ I+  +   L+R G
Sbjct: 481  LLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIKDKLLVELVRGG 540

Query: 2072 MSPLLPKLEHAGPPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGY 1893
            M PLLPK+EH GPPEVL V LDG +VGSIA +++E+ V ++RRLKL A    P+DLEVGY
Sbjct: 541  MIPLLPKMEHTGPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAHPATPEDLEVGY 600

Query: 1892 VPLSFGGAYPGLYLFTSPSRFIRPVRNISHATDHN--IELIGPFEQAFMEIRCADGGDGG 1719
            VPLS GGAYPGLYLFTSP+RF+RPV+N+    D    IELIGPFEQAFMEIRC DGGDGG
Sbjct: 601  VPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGETRIELIGPFEQAFMEIRCPDGGDGG 660

Query: 1718 RRS-FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDV 1542
            R+  FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QAL++RTDV
Sbjct: 661  RKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKYRTDV 720

Query: 1541 KAYHLQTPQSPIVRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLC 1362
            KA+HLQTPQSPIVRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ 
Sbjct: 721  KAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMF 780

Query: 1361 RGHIYKTESIDLAERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTY 1185
            RG I++TE IDL+ ++ ++ P +IFA+S   R T+++IDSDGLP +G+ V P E YYS Y
Sbjct: 781  RGDIFQTECIDLSAKRTENVP-EIFAKSPLSRDTDNVIDSDGLPRVGETVVPYEQYYSIY 839

Query: 1184 DXXXXXXXXXXXKGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQK 1005
            +           KG+EP  +D V + GT +K  +QKVNIR R  RNP+IGDKFSSRHGQK
Sbjct: 840  NTLTGAIRPVRLKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQK 899

Query: 1004 GVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLLGEFQDATP 825
            GVCSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTI ML+ESIAAKAGS+ G+F DATP
Sbjct: 900  GVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGSVHGKFIDATP 959

Query: 824  FASSVKSERSSQ------VDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQ 663
            FASSVK +  ++      VD+LGP+LAS+GFN+HG+EVLYSG +GTE+  EIFIGPVYYQ
Sbjct: 960  FASSVKEDGENRCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFIGPVYYQ 1019

Query: 662  RLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHDRLHS 483
            RLRHMVSDKFQVR+TG +D +T+QP+           GEMERD++LAHGA+YLLHDRLH+
Sbjct: 1020 RLRHMVSDKFQVRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHT 1079

Query: 482  CSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKGMETV 312
            CSDYH+A+VCS CGSLL+ATVI+   Q+K    + G+   + +  FTC AC+T KGMETV
Sbjct: 1080 CSDYHVADVCSLCGSLLSATVIKSDTQKKSKRHLLGVNTVRPAKNFTCQACQTNKGMETV 1139

Query: 311  AMPYVFRYLATELAAMNIKMELKL 240
            AMPYVFRYLA ELAAMNIK++L+L
Sbjct: 1140 AMPYVFRYLAAELAAMNIKLDLRL 1163


>gb|PNT67640.1| hypothetical protein BRADI_3g29917v3 [Brachypodium distachyon]
          Length = 1197

 Score = 1547 bits (4006), Expect = 0.0
 Identities = 767/1168 (65%), Positives = 935/1168 (80%), Gaps = 30/1168 (2%)
 Frame = -1

Query: 3653 ATVRELFKPHIESFDYFIDKGMELAINSIRPTEIVDPTTNTKLRIYFGEPRLLSP-KDAM 3477
            AT+REL++PHIESFDYF+D+G++  + SIRP +I  P+++  LRI   +  LL P +D  
Sbjct: 21   ATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRDVR 80

Query: 3476 SSRSIYPQECREARTTYRGELTVETFFQYNDGVSIRHRLSFGYLPIMLMSKCCHLRGADP 3297
             ++ +YPQECR+AR +Y GE  V+T FQ+N+G  +R   +FG+LPIMLMSK CHLRGAD 
Sbjct: 81   MAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGADS 140

Query: 3296 QKLIFHKEEATEMGGYFICNGLERLCRLLILQKRNYPMGLVRKSFCARGDGYSDKAVIVR 3117
            +KLI+H EEATEMGGYFI  G+ERL R+L+LQKRNYPMG+VR +F  RG GY+DKAV++R
Sbjct: 141  RKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVVIR 200

Query: 3116 CVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIYVSLTSCYK 2937
            CV++DQ+SVTVKLYYLQNGSARLGFW+  RE LLPVGIVLKALIDT+D EI+ SLT CY 
Sbjct: 201  CVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCCYS 260

Query: 2936 ERYQREKGVVGTQLIGERAQIILEEVRKLSLFTRSDCLKHIGDYFKPAIEGFETENYKVV 2757
            ++Y+R KGVV  QLIGERAQIIL+EVR LSL TR+ CL+HIG YF+ A+EGFE ++Y+ V
Sbjct: 261  DKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQTV 320

Query: 2756 ADAVLRDYVLVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLIAL 2577
            A+AVL+DYVLVHL +NH KFNLLIFMLQKLYALVDQTA+PDN D LQ QE LLPG+LI +
Sbjct: 321  AEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLITV 380

Query: 2576 YLKEKVVEWLRKSRRQLLDEMTKANNFNIIDPDQVKKFLGKSSVTIGRSVESMLKVGRLA 2397
            +LK+++ +WLRKS+R +++E TK  +F   +  +++KFL K S ++GR++ES++K+GR  
Sbjct: 381  FLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGRAN 440

Query: 2396 TLASLDLPQKDGMTIQAERLNYLRFISHFRAVHRGAVFTKMRTTVVRKLMPESWGFLCPV 2217
            + + LDLPQ++GM+IQAERLN+ R+ISHFR+VHRG+ F KMRTT VRKL+PESWGFLCPV
Sbjct: 441  SQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLCPV 500

Query: 2216 HTPDGEPCGLLNHMTSACLVTSYFNNEGKIKDFRDIQRSIQNVLIRLGMSPLLPKLEHAG 2037
            HTPDGEPCGLLNHMTSAC ++S++++EG +KDF  I+  +   L+R GM PL PK+EH G
Sbjct: 501  HTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEHTG 560

Query: 2036 PPEVLQVLLDGRVVGSIACSEVEKAVAHIRRLKLSATSMIPDDLEVGYVPLSFGGAYPGL 1857
            PPEVL V LDG +VGSI  +++E+ V +IRRLKL A    P+DLEVGYVPLS GGAYPGL
Sbjct: 561  PPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYPGL 620

Query: 1856 YLFTSPSRFIRPVRNISHATD--HNIELIGPFEQAFMEIRCADGGDGGRR-SFPATHEEI 1686
            Y FTSP+RF+RPV+N+    D   +IELIG FEQAFMEIRC DGGDGGR+ SFPATHEEI
Sbjct: 621  YFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHEEI 680

Query: 1685 HPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALRFRTDVKAYHLQTPQSPI 1506
            HPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF  QAL+FRTDVKA+HLQTPQSPI
Sbjct: 681  HPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQSPI 740

Query: 1505 VRTTSYNKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYKTESIDL 1326
            VRT +Y KY +DEFP+GTNAIVAVL+Y+GYDMEDAMILNKS+VDRG+ RG IY+TE IDL
Sbjct: 741  VRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECIDL 800

Query: 1325 AERQEKSNPLKIFARSN-DRSTNSLIDSDGLPYIGQMVNPKEPYYSTYDXXXXXXXXXXX 1149
            +  + + +  +IFA+S+  R ++S+IDSDGLP +G+ + P E YYSTY+           
Sbjct: 801  STTR-RGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRPTRL 859

Query: 1148 KGSEPVIVDNVTVVGTGTKNYMQKVNIRTRCIRNPVIGDKFSSRHGQKGVCSQLWPDIDM 969
            KG+EP  +D V V GT +K  +QKVNIR R  RNP+IGDKFSSRHGQKGVCSQLWPDIDM
Sbjct: 860  KGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDM 919

Query: 968  PFSAITGMRPDLIINPHAFPSRMTIGMLLESIAAK----------------AGSLLGEFQ 837
            PFSA TGMRPDLIINPHAFPSRMTI MLLESIAAK                AGSL G F 
Sbjct: 920  PFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKSLACLVLVVLTHYLFLAGSLHGNFV 979

Query: 836  DATPFASSVKS------ERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTCEIFIGP 675
            DATPFASSVK       +  S VD++GP+LAS+GFNYHG EVLYSG +GTE+TCEIFIGP
Sbjct: 980  DATPFASSVKEGDGNPWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGP 1039

Query: 674  VYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGAAYLLHD 495
            VYYQRLRHMVSDKFQVR+TG +D +TRQP+           GEMERD++LAHGA+YLLHD
Sbjct: 1040 VYYQRLRHMVSDKFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHD 1099

Query: 494  RLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNACKTRKG 324
            RLHSCSDYHIA+VCS CGSLLTATVI+   Q K   ++ G+   K      C AC+T KG
Sbjct: 1100 RLHSCSDYHIADVCSLCGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKG 1159

Query: 323  METVAMPYVFRYLATELAAMNIKMELKL 240
            METVAMPYVFRYLA ELAAMN+K++L+L
Sbjct: 1160 METVAMPYVFRYLAAELAAMNVKLDLRL 1187