BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00009231
         (1939 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...   719   0.0  
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...   682   0.0  
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...   661   0.0  
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...   599   0.0  
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...   586   0.0  
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB ...   584   0.0  
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...   565   0.0  
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   564   0.0  
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   554   0.0  
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   553   0.0  
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   553   0.0  
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   550   0.0  
ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha c...   549   0.0  
ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania u...   548   0.0  
ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB ...   546   0.0  
ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella ...   544   0.0  
ref|XP_015577773.1| PREDICTED: RNA polymerase sigma factor sigB ...   544   0.0  
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   543   0.0  
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...   541   0.0  
ref|XP_015577772.1| PREDICTED: RNA polymerase sigma factor sigB ...   542   0.0  

>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score =  719 bits (1855), Expect = 0.0
 Identities = 391/555 (70%), Positives = 410/555 (73%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPTLEAHTT 1657
            MACL PQFKCPS   HHHH   QVKPRGP   R++CVSS MTAVI+LDKTYVPTL+AHT 
Sbjct: 1    MACLVPQFKCPSSHHHHHHHPLQVKPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTN 60

Query: 1656 SSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1477
            SSAVT+ LSYVGAIGPP+KTDYK TW                                  
Sbjct: 61   SSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAAAAEAVALARAAVELAKDA 120

Query: 1476 AQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNTPETDHQEGRTNSNQFKD 1297
            AQMI  D  VKLEK+E FPSQA I Q            D  N  E    EG    NQ KD
Sbjct: 121  AQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQE----EGHNTPNQSKD 176

Query: 1296 EGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1117
            EGISSL LNE DLQ+ Q+SENITVRS RQ E                             
Sbjct: 177  EGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGKKKR 236

Query: 1116 XXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAERNGSPPTF 937
              AQE+DYSDPLRYLRG                 EGIQDLIKLESLQ EL ER G+PPTF
Sbjct: 237  SAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGIQDLIKLESLQAELTERYGNPPTF 296

Query: 936  AQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRG 757
            AQWA AA VD RTLR RLNYGR CKDKMIKSNIRLVISIAKNFQG+GMNLQDLVQEGCRG
Sbjct: 297  AQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEGCRG 356

Query: 756  LVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLY 577
            LVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLY
Sbjct: 357  LVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLY 416

Query: 576  SENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTT 397
            SENGR P+DEEI EATGLT KRL+AVMLIPKAPRSL+QKIGINQTLKPSEVI+DPDALTT
Sbjct: 417  SENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDALTT 476

Query: 396  EEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRERIRQIE 217
            EEILV+QLMKQDLNKVLDSLNPREKQV+RWRFGLEDGR+KTLQEIGELMGVSRERIRQIE
Sbjct: 477  EEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIE 536

Query: 216  SCAFRKLKNKKRTTN 172
            SCAFRKLKNKKRT N
Sbjct: 537  SCAFRKLKNKKRTKN 551


>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score =  682 bits (1759), Expect = 0.0
 Identities = 374/533 (70%), Positives = 395/533 (74%)
 Frame = -2

Query: 1770 QVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDY 1591
            ++KPRGP   R++CVSS MTAVI+LDKTYVPTL+AHT SSAVT+ LSYVGAIGPP+KTDY
Sbjct: 20   RLKPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDY 79

Query: 1590 KATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQA 1411
            K TW                                  AQMI  D  VKLEK+E FPSQA
Sbjct: 80   KTTWHAETLLTREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQA 139

Query: 1410 GIFQSXXXXXXXXXXXDMMNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENI 1231
             I Q            D  N  E    EG    NQ KDEGISSL LNE DLQ+ Q+SENI
Sbjct: 140  DIRQLKRPTLTELELLDTTNNQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQESENI 195

Query: 1230 TVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXX 1051
            TVRS RQ E                               AQE+DYSDPLRYLRG     
Sbjct: 196  TVRSMRQSERRARRAKAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNS 255

Query: 1050 XXXXXXXXXXXXEGIQDLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGR 871
                        EGIQDLIKLESLQ EL ER G+PPTFAQWA AA VD RTLR RLNYGR
Sbjct: 256  KLLTADEELELSEGIQDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGR 315

Query: 870  SCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHW 691
             CKDKMIKSNIRLVISIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHW
Sbjct: 316  YCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHW 375

Query: 690  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKR 511
            WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGR P+DEEI EATGLT KR
Sbjct: 376  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKR 435

Query: 510  LSAVMLIPKAPRSLDQKIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNP 331
            L+AVMLIPKAPRSL+QKIGINQTLKPSEVI+DPDALTTEEILV+QLMKQDLNKVLDSLNP
Sbjct: 436  LTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNP 495

Query: 330  REKQVLRWRFGLEDGRIKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTTN 172
            REKQV+RWRFGLEDGR+KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT N
Sbjct: 496  REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKN 548


>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score =  661 bits (1706), Expect = 0.0
 Identities = 364/515 (70%), Positives = 381/515 (73%)
 Frame = -2

Query: 1716 MTAVIDLDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXX 1537
            MTAVI+LDKTYVPTL+AHT SSAVT+ LSYVGAIGPP+KTDYK TW              
Sbjct: 1    MTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIA 60

Query: 1536 XXXXXXXXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDM 1357
                                AQMI  D  VKLEK+E FPSQA I Q            D 
Sbjct: 61   AAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDT 120

Query: 1356 MNTPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXX 1177
             N  E    EG    NQ KDEGISSL LNE DLQ+ Q+SENITVRS RQ E         
Sbjct: 121  TNNQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAA 176

Query: 1176 XXXXXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDL 997
                                  AQE+DYSDPLRYLRG                 EGIQDL
Sbjct: 177  EKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGIQDL 236

Query: 996  IKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIA 817
            IKLESLQ EL ER G+PPTFAQWA AA VD RTLR RLNYGR CKDKMIKSNIRLVISIA
Sbjct: 237  IKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVISIA 296

Query: 816  KNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 637
            KNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 297  KNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 356

Query: 636  LPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKI 457
            LPFHMVEATYRVREARKQLYSENGR P+DEEI EATGLT KRL+AVMLIPKAPRSL+QKI
Sbjct: 357  LPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLEQKI 416

Query: 456  GINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIK 277
            GINQTLKPSEVI+DPDALTTEEILV+QLMKQDLNKVLDSLNPREKQV+RWRFGLEDGR+K
Sbjct: 417  GINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDGRMK 476

Query: 276  TLQEIGELMGVSRERIRQIESCAFRKLKNKKRTTN 172
            TLQEIGELMGVSRERIRQIESCAFRKLKNKKRT N
Sbjct: 477  TLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKN 511


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score =  599 bits (1545), Expect = 0.0
 Identities = 334/559 (59%), Positives = 374/559 (66%), Gaps = 6/559 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFH------HHHQRQQVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPT 1675
            MACL PQFKCPS S         HH     K R    FRS CVS+   AVID+ +  +P+
Sbjct: 1    MACLVPQFKCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQR--IPS 58

Query: 1674 LEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXX 1495
            LEAH+TS   T+ L+YVGA+GPP KT  +AT  T                          
Sbjct: 59   LEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAAV 118

Query: 1494 XXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNTPETDHQEGRTN 1315
                  AQ+IGND  VKLEKSE F S+A  F+               N       E    
Sbjct: 119  EVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHEA 178

Query: 1314 SNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXX 1135
             +  +   +S+L   EL+ QQ Q  E+I VRS RQ +                       
Sbjct: 179  KDPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVKSGS 238

Query: 1134 XXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAERN 955
                     QEVDYSDPLRYLRG                 E IQD++KLE LQ+ELAER+
Sbjct: 239  TSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQELAERH 298

Query: 954  GSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLV 775
            G  PTFAQWA AAGVD RTLR RLNYGR CKDKMIKSNIRLVISIAKN+QGAGMNLQDLV
Sbjct: 299  GGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 358

Query: 774  QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVRE 595
            QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRVRE
Sbjct: 359  QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVRE 418

Query: 594  ARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIAD 415
            A+KQLYSENGR P+ +E+ EATGL+ KRL+AVML PKAPRSLDQKIGINQ+LKPSEVIAD
Sbjct: 419  AKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSEVIAD 478

Query: 414  PDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRE 235
            P+A T+EEIL++Q  KQDLNKVLD+LNPREKQV+RWRFGLEDG  KTLQEIGELMGVSRE
Sbjct: 479  PEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMGVSRE 538

Query: 234  RIRQIESCAFRKLKNKKRT 178
            RIRQIES AFRKLKNKKRT
Sbjct: 539  RIRQIESSAFRKLKNKKRT 557


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  586 bits (1510), Expect = 0.0
 Identities = 334/561 (59%), Positives = 374/561 (66%), Gaps = 6/561 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFH------HHHQRQQVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPT 1675
            MACL PQFKCPS S         HH     K R    FRS+CVS+   AVID++  ++ +
Sbjct: 1    MACLVPQFKCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDME--HILS 58

Query: 1674 LEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXX 1495
            LEA +TS A T+ L+YVGAIGPP KT+ +AT  T                          
Sbjct: 59   LEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTAV 118

Query: 1494 XXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNTPETDHQEGRTN 1315
                  A  I ND  VKLEKS  F S+A I Q            +     +T   E    
Sbjct: 119  EAAKDAALTIANDPSVKLEKSLDFSSEADILQ-----------LERSTATDTKPHEEHLA 167

Query: 1314 SNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXXX 1135
             +  +D  IS+L  NEL+ Q+   S +I VRS RQ E                       
Sbjct: 168  KDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVKSGS 227

Query: 1134 XXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAERN 955
                     QE+DYSDPLRYLRG                 EGIQDL+KLE L+EEL ERN
Sbjct: 228  SSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREELEERN 287

Query: 954  GSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDLV 775
            G+ PT AQWA AAGVD RTLR RLNYG  CKDKMI SNIRLVISIAKN+QGAGMNLQDLV
Sbjct: 288  GAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNLQDLV 347

Query: 774  QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVRE 595
            QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRVR+
Sbjct: 348  QEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVRQ 407

Query: 594  ARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIAD 415
            A KQLY+ENGR P+ EEI EATGL+ KRL+AVMLIPKAPRSLDQKIGINQ+LKPSEVIAD
Sbjct: 408  AEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPKAPRSLDQKIGINQSLKPSEVIAD 467

Query: 414  PDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSRE 235
            P A T+EEIL++Q MKQDLNKVL+SLNPREKQV+RWRFGLEDG  KTLQEIGELMGVSRE
Sbjct: 468  PKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWRFGLEDGMTKTLQEIGELMGVSRE 527

Query: 234  RIRQIESCAFRKLKNKKRTTN 172
            RIRQIES AFRKLK+KKRT N
Sbjct: 528  RIRQIESNAFRKLKSKKRTKN 548


>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
          Length = 566

 Score =  584 bits (1505), Expect = 0.0
 Identities = 332/562 (59%), Positives = 377/562 (67%), Gaps = 9/562 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQVKP------RGPFGFRSRCVSSQMTAVIDLDKTYVPT 1675
            MACL PQFKCPS S   H +     P      R    FRS+CVS+Q  AVID+ +  +P+
Sbjct: 1    MACLVPQFKCPSISPEAHFRSVSHLPSLNSKARDSVCFRSQCVSTQTAAVIDIQR--IPS 58

Query: 1674 LEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXX 1495
            LEA + S   T+ L+YVG++GPP KT  +AT  T                          
Sbjct: 59   LEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAAAAEAVALARAAV 118

Query: 1494 XXXXXXAQMIGNDSFVKLEKSEGFPSQAGIF--QSXXXXXXXXXXXDMMNTP-ETDHQEG 1324
                  AQ+I ND  VKLEKSE F S+A  F  +               +TP +T+  E 
Sbjct: 119  EVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEPHEA 178

Query: 1323 RTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXX 1144
            +  S   +D  +S+L  NEL  QQ Q  E+I VRS RQ E                    
Sbjct: 179  KDPS---QDIDVSNLTNNELQSQQMQYPESIAVRSGRQTERKARRARAEEKAAVSVIPIK 235

Query: 1143 XXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELA 964
                        QE+DYSDPL YLRG                 +GIQDL+KLE L+EELA
Sbjct: 236  SGSSSKKKRSAFQEIDYSDPLHYLRGTTSTSKLLTAAEELELSKGIQDLLKLEKLREELA 295

Query: 963  ERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQ 784
            ER+G  PTFAQWA AAGVD RTLR RLNYG  CKDKMIKSNIRLVISIAKN+QGAGMNLQ
Sbjct: 296  ERHGGQPTFAQWAAAAGVDQRTLRKRLNYGGFCKDKMIKSNIRLVISIAKNYQGAGMNLQ 355

Query: 783  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 604
            DLVQEGCRGLVKGAE+FDA KGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP HMVEATYR
Sbjct: 356  DLVQEGCRGLVKGAERFDALKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPIHMVEATYR 415

Query: 603  VREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEV 424
            VREA+KQLYSENGR P+ EE+ EATGL+ KRL+AVML PKAPRSLDQKIGINQ+LKPSEV
Sbjct: 416  VREAKKQLYSENGRHPDYEEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSEV 475

Query: 423  IADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGV 244
            IADP A T+EEIL++Q MKQDLNKVLD+LNPREKQV+RWRFGLEDG  KTLQEIGELMGV
Sbjct: 476  IADPKAETSEEILIKQFMKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMGV 535

Query: 243  SRERIRQIESCAFRKLKNKKRT 178
            SRERIRQIES AFRKLK+KKRT
Sbjct: 536  SRERIRQIESSAFRKLKSKKRT 557


>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 567

 Score =  565 bits (1457), Expect = 0.0
 Identities = 321/562 (57%), Positives = 372/562 (66%), Gaps = 7/562 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQVKPRGP--FGFRSRCVSSQMTAVIDLDKTYVPTLEAH 1663
            MACL PQFK PS           + PR      FRSRCV S  TAVID ++  +P LEAH
Sbjct: 1    MACLVPQFKPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFEQ--IPKLEAH 58

Query: 1662 TTSSAVT--QRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1489
            +TSS+    + L+Y G++GPP KT  +AT  +                            
Sbjct: 59   STSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALEL 118

Query: 1488 XXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNTP---ETDHQEGRT 1318
                AQMIG +   ++EK E  PS+A I                 N P   ET   E   
Sbjct: 119  AKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYNV 178

Query: 1317 NSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXXX 1138
            + +Q+    ISS   +E + Q  Q  ENI VRS RQIE                      
Sbjct: 179  SLDQYASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKSG 238

Query: 1137 XXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAER 958
                      QE+DYSDPLRYLRG                 EGIQ L+KLE LQ++LAER
Sbjct: 239  SSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEIELSEGIQSLLKLERLQQDLAER 298

Query: 957  NGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQDL 778
            NG  PTFAQWA AAG+D +TLR R+N+G  CKDKMIKSNIRLVISIAKN+QGAG+NLQDL
Sbjct: 299  NGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKDKMIKSNIRLVISIAKNYQGAGINLQDL 358

Query: 777  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVR 598
            VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRVR
Sbjct: 359  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVR 418

Query: 597  EARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVIA 418
            EA+K+LYSENGR P++EE+ EA GL+ KRL+AVML PKAPRSLDQKIGINQ+LK SEVIA
Sbjct: 419  EAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGINQSLKASEVIA 478

Query: 417  DPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVSR 238
            DP A T+E+IL++Q M++DLNKVLD+LN REKQV+RWRFGL+DGR+KTLQEIGELMGVSR
Sbjct: 479  DPAAKTSEDILMKQFMREDLNKVLDTLNLREKQVVRWRFGLDDGRMKTLQEIGELMGVSR 538

Query: 237  ERIRQIESCAFRKLKNKKRTTN 172
            ERIRQIESCAFRKLK+KKRT N
Sbjct: 539  ERIRQIESCAFRKLKSKKRTKN 560


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  564 bits (1453), Expect = 0.0
 Identities = 322/571 (56%), Positives = 364/571 (63%), Gaps = 16/571 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSF----------HHHHQRQQVKPRGPFGFRSRCVSSQMTA-----VI 1702
            MACL PQFKC   +           HH+    Q+K R    FR++C+ S  TA     V+
Sbjct: 1    MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTVV 60

Query: 1701 DLDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXX 1522
            D +K  +P+LEAH  S    + L+Y+GAI PP K  ++AT  T                 
Sbjct: 61   DDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAVE 120

Query: 1521 XXXXXXXXXXXXXXXAQMIGNDSFVKLEK-SEGFPSQAGIFQSXXXXXXXXXXXDMMNTP 1345
                           A M+  +   K +K     PS+   +             DM+   
Sbjct: 121  AVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMV--- 177

Query: 1344 ETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXX 1165
               H      S   +D         EL L Q Q S++I VRS RQ E             
Sbjct: 178  ---HHSLGAESRPKEDSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEKVA 234

Query: 1164 XXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLE 985
                               Q+VDYSDPLRYLRG                 EGIQDL+KLE
Sbjct: 235  ANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLKLE 294

Query: 984  SLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQ 805
             L EELAER G  PTFAQWA AAG+D +TLR RLNYG  CKDKMIKSNIRLVISIAKN+Q
Sbjct: 295  KLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQ 354

Query: 804  GAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 625
            GAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH
Sbjct: 355  GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 414

Query: 624  MVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQ 445
            MVEATYRVREARKQLYSENGR P++EE+ EATGL+ KRL+AV+L PKAPRSLDQKIGINQ
Sbjct: 415  MVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQ 474

Query: 444  TLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQE 265
             LKPSEVIADPDA TTEE+L+++ MKQDL KVLDSLNPREKQV+RWRFGLEDGR+KTLQE
Sbjct: 475  NLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQE 534

Query: 264  IGELMGVSRERIRQIESCAFRKLKNKKRTTN 172
            IGELMGVSRERIRQIESCAFRKLKNKKRT N
Sbjct: 535  IGELMGVSRERIRQIESCAFRKLKNKKRTKN 565


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  554 bits (1427), Expect = 0.0
 Identities = 313/577 (54%), Positives = 368/577 (63%), Gaps = 22/577 (3%)
 Frame = -2

Query: 1836 MACLAPQFKCP-------------SYSFHHHHQRQQVKPRGPFGFRSRCVSS-----QMT 1711
            MACL PQFKC               +  HHH      K R    F+++CV S       T
Sbjct: 1    MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMTT 60

Query: 1710 AVIDLDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 1531
             ++D++K  +P+LE+H+ S A  + LSY+GA GPP K  ++AT                 
Sbjct: 61   TLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAA 120

Query: 1530 XXXXXXXXXXXXXXXXXXAQMIGNDSFVKLEKSEG-FPSQAGIFQSXXXXXXXXXXXDMM 1354
                              A M+ + S  + E     F S++ IF+              +
Sbjct: 121  AAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRI 180

Query: 1353 N-TPETDHQEGRTNSNQFKDEGISSLRLN--ELDLQQTQDSENITVRSWRQIEXXXXXXX 1183
            + +   + ++    S QF ++    L  +  E  L Q Q  ++I VRS RQ E       
Sbjct: 181  DHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRAR 240

Query: 1182 XXXXXXXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQ 1003
                                     Q++DYSDPLRYLRG                 EGIQ
Sbjct: 241  AMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQ 300

Query: 1002 DLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVIS 823
            DL+KLE L EELAER G  PTFAQWA AAGVD +TLR RLNYG  CKDKMIKSNIRLVIS
Sbjct: 301  DLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 360

Query: 822  IAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 643
            IAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 361  IAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 420

Query: 642  IRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQ 463
            IRLPFHMVEATYRVREA+KQLYSENGR P++EE+ EATGL+ KRL+AV+L PKAP SLDQ
Sbjct: 421  IRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQ 480

Query: 462  KIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGR 283
            KIG+NQ +KPSE+IADPDA T EE+L++Q MKQDL KVLDSLNPREKQV+RWRFG+EDGR
Sbjct: 481  KIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGR 540

Query: 282  IKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTTN 172
            +KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RT N
Sbjct: 541  MKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKN 577


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
 emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
          Length = 575

 Score =  553 bits (1425), Expect = 0.0
 Identities = 311/567 (54%), Positives = 370/567 (65%), Gaps = 14/567 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQV-KPRGPFGFRSRC--------VSSQMTAVIDLDKTY 1684
            M+CL PQFKCP  +F  H +   + K R    FR +C        +S+  TAV+D++K  
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLR 60

Query: 1683 VPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXX 1504
            +P+LE+H+ S A  +  +Y+G +GPP + +++AT                          
Sbjct: 61   LPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAK 120

Query: 1503 XXXXXXXXXAQMIGNDSFVKLE-KSEGFPSQAGIFQSXXXXXXXXXXXDMMNTPETDHQE 1327
                     A+++G ++  K E K   F S     Q             ++       + 
Sbjct: 121  AAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGD-SVGAET 179

Query: 1326 GRTNSNQFKD--EGISSLR--LNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXX 1159
            G  + N  +D  E    L   L EL+L + + S++I VRS RQ+E               
Sbjct: 180  GMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAG 239

Query: 1158 XXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESL 979
                             QEVDYSDPLRYLRG                 EGIQDL+KLE L
Sbjct: 240  VVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKL 299

Query: 978  QEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGA 799
            QE+L ER G  PTFAQWA AAGVD +TLR R NYG  CKDKMIKSNIRLVISIAKN+QGA
Sbjct: 300  QEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGA 359

Query: 798  GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 619
            GMN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV
Sbjct: 360  GMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 419

Query: 618  EATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTL 439
            EATYRV+EARKQLYSENGR PN+EE+ EATGL+ KRL+AV+L PKAPRSLDQKIGINQ L
Sbjct: 420  EATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNL 479

Query: 438  KPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIG 259
            KPSEVIADPDA T EE+L++Q M++DL KVL+SLNPREKQV+RWR+GLEDGR KTLQEIG
Sbjct: 480  KPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIG 539

Query: 258  ELMGVSRERIRQIESCAFRKLKNKKRT 178
            ELMGVSRERIRQIESCAFRKLKNK+RT
Sbjct: 540  ELMGVSRERIRQIESCAFRKLKNKRRT 566


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  553 bits (1425), Expect = 0.0
 Identities = 312/568 (54%), Positives = 364/568 (64%), Gaps = 15/568 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCP----SYSFHHHHQRQQVKPRGPFGFRSRCV--------SSQMTAVIDLD 1693
            M+CL PQFKC     S  F  HH     K +    FR++CV        S+  TAV+D++
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHS-KHKEHICFRTQCVLSTTSSSTSTTATAVLDVE 59

Query: 1692 KTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXX 1513
            K  +P+ EAH  S AV +  +Y+GA GPP++    AT  T                    
Sbjct: 60   KLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAAAEAVA 119

Query: 1512 XXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN---TPE 1342
                        A M  N ++ K E   G       F S            ++    T E
Sbjct: 120  LARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDE 179

Query: 1341 TDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXX 1162
            ++ +E  +  N   +         EL+  + Q S +I VRS RQ E              
Sbjct: 180  SEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAA 239

Query: 1161 XXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLES 982
                              Q+VDYSDPLRYLRG                 EGIQDL+KLE 
Sbjct: 240  NVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLER 299

Query: 981  LQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQG 802
            LQEELAER G  PTFAQWA AAGVD +TLR+RLNYG  CKDKMIKSNIRLVISIAKN+QG
Sbjct: 300  LQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQG 359

Query: 801  AGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 622
            AGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 360  AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 419

Query: 621  VEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQT 442
            VEATYRV+EARKQLYSENGR P++EE+ EATGL+ KRL+AV+L PKAPRSLDQKIGINQ 
Sbjct: 420  VEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 479

Query: 441  LKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEI 262
            LKPSEVIADP+A T E++L++Q M++DL KVLDSL+ RE+QV+RWRFG+EDGR+KTLQEI
Sbjct: 480  LKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEI 539

Query: 261  GELMGVSRERIRQIESCAFRKLKNKKRT 178
            GELMGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 540  GELMGVSRERIRQIESCAFRKLKNKKRT 567


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  550 bits (1418), Expect = 0.0
 Identities = 306/564 (54%), Positives = 359/564 (63%), Gaps = 11/564 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQVKPRGPFGFRSRCV--------SSQMTAVIDLDKTYV 1681
            M+CL PQFKC   +F  H +    KPR        C+        S   T V++L+K  +
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHLPKPRDSISSWPHCILSTSSPSTSMATTTVLNLEKLRL 60

Query: 1680 PTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXX 1501
            P+L+A++ S    +  +Y GAIGPPAK + +AT  T                        
Sbjct: 61   PSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAAAEAVTLAKA 120

Query: 1500 XXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNT---PETDHQ 1330
                      +I N+   + E +  F  +                   +     P+T   
Sbjct: 121  AVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHMKTGQPVRLGDSMGPKTAQL 180

Query: 1329 EGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXX 1150
            +  +     K+         EL+L Q+Q S  I VRS RQ E                  
Sbjct: 181  DDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARRTRAAEKAAATVVS 240

Query: 1149 XXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEE 970
                          Q++D+SDPLRYLR                  EGIQDL+KLE LQEE
Sbjct: 241  VKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLKLEKLQEE 300

Query: 969  LAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMN 790
            L ER GS PTFAQWA AAGVD +TLR R+NYG  CKDKMIKSNIRLVISIAKN+QGAGMN
Sbjct: 301  LTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKNYQGAGMN 360

Query: 789  LQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 610
            LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT
Sbjct: 361  LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 420

Query: 609  YRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPS 430
            YRV+EARKQLYS+NGR P+DEE+ EATGL+ KRL+AV+L PKAPRSL+QKIGINQ LKPS
Sbjct: 421  YRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPS 480

Query: 429  EVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELM 250
            EVIADPDA T+E++L+R+ MKQDL+KVLDSLNPREKQV+RWRFG+EDGR+KTLQEIGELM
Sbjct: 481  EVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELM 540

Query: 249  GVSRERIRQIESCAFRKLKNKKRT 178
            GVSRERIRQIESCAFRKLKNKKRT
Sbjct: 541  GVSRERIRQIESCAFRKLKNKKRT 564


>ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha curcas]
 gb|KDP39610.1| hypothetical protein JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  549 bits (1414), Expect = 0.0
 Identities = 316/569 (55%), Positives = 360/569 (63%), Gaps = 16/569 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQR---------QQVKPRGPFGFRSRCV-----SSQMTAVID 1699
            M+CL PQFKC   +F  H +          Q  K R P  FR++C+      S  TAV+D
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTSPSTSTAVLD 60

Query: 1698 LDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXX 1519
            L+K  +P+ EAH  S       +YVG+IGPP +T + +T  T                  
Sbjct: 61   LEKLRLPSFEAHPDSLVANSPWTYVGSIGPPKET-FGSTLATETLITGDDAVIAAAAAEA 119

Query: 1518 XXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN--TP 1345
                          A ++ +    + E     PS A +               + +  T 
Sbjct: 120  VALARAAAKVAKDAAILVKSFPSSEAESKLEIPSIADVSSRWPQFTETDRARIIGDSVTA 179

Query: 1344 ETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXX 1165
            ET  +E     +  K+         EL+L Q Q SE I VRS RQ E             
Sbjct: 180  ETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAEKAA 239

Query: 1164 XXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLE 985
                               QEVDYSDPLRYLRG                 EGIQDL+KLE
Sbjct: 240  ANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLLKLE 299

Query: 984  SLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQ 805
             L EELAER G  PTF QWA AAGVD +TLRTRLNYG SCKD+MIKSNIRLVISIAKN+Q
Sbjct: 300  RLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAKNYQ 359

Query: 804  GAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 625
            GAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH
Sbjct: 360  GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 419

Query: 624  MVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQ 445
            MVEATYRV+EARKQLYSENGR P+DEE+ EATGL+ KRLSAV+L PKAPRSLDQKIGIN 
Sbjct: 420  MVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGINM 479

Query: 444  TLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQE 265
             LKPSE+IADPDA T E++L++Q MKQDL KVLDSL+PRE QV+RWRFGLEDGRIKTLQE
Sbjct: 480  DLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKTLQE 539

Query: 264  IGELMGVSRERIRQIESCAFRKLKNKKRT 178
            IGE+MGVSRERIRQIES AFRKLK KKRT
Sbjct: 540  IGEIMGVSRERIRQIESSAFRKLKKKKRT 568


>ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania umbratica]
          Length = 579

 Score =  548 bits (1412), Expect = 0.0
 Identities = 309/568 (54%), Positives = 362/568 (63%), Gaps = 15/568 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCP----SYSFHHHHQRQQVKPRGPFGFRSRCV--------SSQMTAVIDLD 1693
            M+CL PQFKC     S  F  HH     K +    FR++CV        S+  TAV+D++
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHS-KHKEHICFRTQCVLSTTSSSTSAMTTAVLDVE 59

Query: 1692 KTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXX 1513
            K  +P+ EAH  S A  +  +Y+GA GPP++    AT  T                    
Sbjct: 60   KLRLPSFEAHPNSVAADRPWTYIGATGPPSEASLAATLATENLLTSDEAVIAAAAAESVA 119

Query: 1512 XXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN---TPE 1342
                        A M  N ++ K E   G  S    F S            ++    T E
Sbjct: 120  LARAAVKVAKDAALMAKNYNYAKTEMKSGVSSATDTFTSKWALFTEAERAGIIGDSPTDE 179

Query: 1341 TDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXX 1162
            ++ +E  +  N   +         EL+L + Q S +I VRS RQ E              
Sbjct: 180  SEMEEDDSEQNATTESDELEPTNEELELLEEQLSRSIIVRSRRQTERKAKRTRAAEKAAV 239

Query: 1161 XXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLES 982
                              Q+VDYSDPL YLR                  EGIQDL+KLE 
Sbjct: 240  NVVSVKSGSTNRKKRGALQDVDYSDPLHYLRVTTSTSRLLTANEELELSEGIQDLLKLER 299

Query: 981  LQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQG 802
            LQEELAER G  PTFAQWA AAGVD +TLR+RLNYG  CKDKMIKSNIRLVISIAKN+QG
Sbjct: 300  LQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVLCKDKMIKSNIRLVISIAKNYQG 359

Query: 801  AGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 622
            AGMNLQDLVQEGCRGL++GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 360  AGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 419

Query: 621  VEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQT 442
            VEATYRVREARK LYSENGR P++EE+ +ATGL+ KRL+AV+L PKAPRSLDQKIGINQ 
Sbjct: 420  VEATYRVREARKHLYSENGRHPDNEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 479

Query: 441  LKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEI 262
            LKPSEVIADP+A T E++L++Q M++DL KVLDSL+ RE+QV+RWRFG+EDGR+KTLQEI
Sbjct: 480  LKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEI 539

Query: 261  GELMGVSRERIRQIESCAFRKLKNKKRT 178
            GELMGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 540  GELMGVSRERIRQIESCAFRKLKNKKRT 567


>ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  546 bits (1408), Expect = 0.0
 Identities = 312/575 (54%), Positives = 364/575 (63%), Gaps = 22/575 (3%)
 Frame = -2

Query: 1836 MACLAPQFKCP----SYSFHHHHQRQQVKPRGPFGFRSRCV--------SSQMTAVIDLD 1693
            M+CL PQFKC     S  F  HH     K +    FR++CV        S+  TAV+D++
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHS-KHKEHICFRTQCVLSTTSSSTSTTATAVLDVE 59

Query: 1692 KTYVPTLEAHTTSSAVTQRLSYVGAIGPPA-------KTDYKATWPTXXXXXXXXXXXXX 1534
            K  +P+ EAH  S AV +  +Y+GA GPP+       +    AT  T             
Sbjct: 60   KLRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDEAIIAA 119

Query: 1533 XXXXXXXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMM 1354
                               A M  N ++ K E   G       F S            ++
Sbjct: 120  AAAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGII 179

Query: 1353 N---TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXX 1183
                T E++ +E  +  N   +         EL+  + Q S +I VRS RQ E       
Sbjct: 180  GDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTR 239

Query: 1182 XXXXXXXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQ 1003
                                     Q+VDYSDPLRYLRG                 EGIQ
Sbjct: 240  AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 299

Query: 1002 DLIKLESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVIS 823
            DL+KLE LQEELAER G  PTFAQWA AAGVD +TLR+RLNYG  CKDKMIKSNIRLVIS
Sbjct: 300  DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 359

Query: 822  IAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 643
            IAKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 360  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 419

Query: 642  IRLPFHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQ 463
            IRLPFHMVEATYRV+EARKQLYSENGR P++EE+ EATGL+ KRL+AV+L PKAPRSLDQ
Sbjct: 420  IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 479

Query: 462  KIGINQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGR 283
            KIGINQ LKPSEVIADP+A T E++L++Q M++DL KVLDSL+ RE+QV+RWRFG+EDGR
Sbjct: 480  KIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGR 539

Query: 282  IKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT 178
            +KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 540  MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRT 574


>ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella trichopoda]
          Length = 563

 Score =  544 bits (1402), Expect = 0.0
 Identities = 304/563 (53%), Positives = 363/563 (64%), Gaps = 8/563 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQRQQVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPTLEAHTT 1657
            MAC+ PQF     S+H++     ++ R    F+++CVSS  T V+D+DK  VP+L  H+T
Sbjct: 1    MACMLPQFIHIRTSYHNN-----LRTREATCFQTQCVSSTATVVVDVDKVRVPSLGGHST 55

Query: 1656 SSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1477
            S +    L+YVG IG   KTD++A   T                                
Sbjct: 56   SVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDA 115

Query: 1476 AQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNT-------PETDHQE-GR 1321
            A M+G+    + +K + FPS+A I +              M+        P   H+   +
Sbjct: 116  ALMVGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQ 175

Query: 1320 TNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXX 1141
             + N+  D+     R N L+  Q Q S+ + VRS RQ E                     
Sbjct: 176  LSPNEMADK---QSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKL 232

Query: 1140 XXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAE 961
                       QE+DYSDPLRYLRG                 EGIQDL+KLE L +EL E
Sbjct: 233  GTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTE 292

Query: 960  RNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQD 781
            R G  PTF QWA AAG+D + LR RL+YG  CKDKMIKSNIRLVISIAKN+QG G+++QD
Sbjct: 293  RFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQD 352

Query: 780  LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 601
            LVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV+ATYRV
Sbjct: 353  LVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRV 412

Query: 600  REARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVI 421
            REA KQLYSENGR PNDEE+ EATGL+ KRL+ V+L PKAPRSLDQKIGINQ LKPSEVI
Sbjct: 413  REATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVI 472

Query: 420  ADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVS 241
            +DP+A T E++L++Q MKQDL KVL++LNPREKQV+RWRFGLEDGR+KTLQEIGELMGVS
Sbjct: 473  SDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVS 532

Query: 240  RERIRQIESCAFRKLKNKKRTTN 172
            RERIRQIES AFRKLKNKKRT N
Sbjct: 533  RERIRQIESSAFRKLKNKKRTKN 555


>ref|XP_015577773.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Ricinus
            communis]
          Length = 578

 Score =  544 bits (1402), Expect = 0.0
 Identities = 312/570 (54%), Positives = 358/570 (62%), Gaps = 17/570 (2%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSF---------HHHHQRQQVKPRGPFGFRSRCV-----SSQMTAVID 1699
            M+CL PQFKC   +F         H  +  Q  K R P  +R++C+      S  TAV+D
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVLD 61

Query: 1698 LDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXX 1519
            L+K  +P+ EA + S A     +YV AIGPP +  + +T  T                  
Sbjct: 62   LEKLRLPSFEAPSDSIAPNSPWTYVRAIGPPKEATFGSTLATETLITSDEAVIAAAAAEA 121

Query: 1518 XXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN---T 1348
                          A ++ N  F   E      S + I  S            ++     
Sbjct: 122  VALARAAVKVAKDAALLVKN--FPSAETESKLTSPSTIDASRWPQFTETERARIIGDSVA 179

Query: 1347 PETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXX 1168
             ET  +E  +  +  K+     L   EL+L Q Q SE I VRS RQ E            
Sbjct: 180  TETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKA 239

Query: 1167 XXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKL 988
                                QEVDYSDPLRYLRG                   IQDL+KL
Sbjct: 240  ASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKL 299

Query: 987  ESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNF 808
            E LQEELAER G  PTFAQWA AAGVD RTLR R+N+G  CKDKMIKSNIRLVISIAKN+
Sbjct: 300  ERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNY 359

Query: 807  QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 628
            QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 360  QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 419

Query: 627  HMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGIN 448
            HMVEATYRV+EARKQLYSENGR P+DEE+ EA GL+ KRLSAV+L PKAPRSLDQKIG+N
Sbjct: 420  HMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMN 479

Query: 447  QTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQ 268
              LKPSEVIADP+A T EE+L++Q MKQDL KVL++LNPRE QV+RWRFGLEDGR+KTLQ
Sbjct: 480  MDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQ 539

Query: 267  EIGELMGVSRERIRQIESCAFRKLKNKKRT 178
            EIGE+MGVSRERIRQIES AFRKLKNKKRT
Sbjct: 540  EIGEIMGVSRERIRQIESSAFRKLKNKKRT 569


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  543 bits (1400), Expect = 0.0
 Identities = 313/570 (54%), Positives = 364/570 (63%), Gaps = 15/570 (2%)
 Frame = -2

Query: 1842 KQMACLAPQFKCPSYSFHHHHQRQQVKPRGPFGFRSRCV---------SSQMTAVI-DLD 1693
            +  +CL PQFKC   +F    +    K R    FR++C+         SS  TAV+ D++
Sbjct: 12   RMSSCLLPQFKCQPDTFSIQFRTHAQKNRETTYFRAQCLLSATSPSTLSSAATAVVLDME 71

Query: 1692 KTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXX 1513
            K  +P+LE  T S    +  +Y GA+GPPA+ +  AT  T                    
Sbjct: 72   KLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVT 131

Query: 1512 XXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMNT---PE 1342
                        A MI N+S   ++      S+     S           +++     PE
Sbjct: 132  LAKAALKSAKHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEPE 191

Query: 1341 TDHQEGRTNSNQFKDEGISSLRLN--ELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXX 1168
               +EG  N  Q+  +    L     EL L Q Q  ++I VRS RQ E            
Sbjct: 192  GGLREG--NVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKA 249

Query: 1167 XXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKL 988
                                QEVDYSDPLRYLRG                 EGIQDL+KL
Sbjct: 250  AANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKL 309

Query: 987  ESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNF 808
            E LQ EL ER G  P FAQWA AAGVD +TLR RLNYGR CKDKMIKSNIRLVISIAKN+
Sbjct: 310  ERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNY 369

Query: 807  QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 628
            QGAGMNLQDLVQEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 370  QGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 429

Query: 627  HMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGIN 448
            HMVEATYRV+EARKQLYSENGRQP++EE+ EATGL+ KRL+AV++ PKAPRSLDQKIGIN
Sbjct: 430  HMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGIN 489

Query: 447  QTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQ 268
            Q LKPSEVIADP+A T+E++L++Q M+QDL KVLD+LNPREKQV+RWRFGLEDGR+KTLQ
Sbjct: 490  QNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQ 549

Query: 267  EIGELMGVSRERIRQIESCAFRKLKNKKRT 178
            EIGELMGVSRERIRQIESCAFRKLKNKKRT
Sbjct: 550  EIGELMGVSRERIRQIESCAFRKLKNKKRT 579


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 553

 Score =  541 bits (1395), Expect = 0.0
 Identities = 308/563 (54%), Positives = 359/563 (63%), Gaps = 8/563 (1%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHH---QRQQVKPRGPFGFRSRCVSSQMTAVIDLDKTYVPTLEA 1666
            MACL PQFK P  S  H          K R     + RCV S  TA+ID ++  +P LEA
Sbjct: 1    MACLVPQFKPPPTSDAHSRLSLPSLHPKARESVWSQVRCVLSPKTALIDFEQ--IPKLEA 58

Query: 1665 HTTS--SAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXXXXXXXXXXXX 1492
             +TS  +   + L+Y GA+G P KT ++ATW +                           
Sbjct: 59   RSTSLSTCAIKPLTYTGAVGLPTKTSFEATWASEALLTNEEAVIAAAAAEAVALARAALE 118

Query: 1491 XXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN---TPETDHQEGR 1321
                 AQMI      ++E      ++                  M N     ET   E  
Sbjct: 119  LAKDAAQMIRKSPSAEVENVNLSKTE---------------WTGMTNHSVATETTSLEDS 163

Query: 1320 TNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXXXXXXXXXXXX 1141
               ++   + ISS   NE ++++T+   NI VRS RQ E                     
Sbjct: 164  VTLDESVRKDISSSTYNETEVEETEYCGNIAVRSGRQTERRARRARAAEKAAAGVLNLKS 223

Query: 1140 XXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIKLESLQEELAE 961
                       QE+DYSDPL YLRG                 EGIQDL+KLE LQ++L E
Sbjct: 224  GSSGKKKRSTLQEIDYSDPLHYLRGTTSTSRLLTAAEEVELSEGIQDLLKLERLQQDLTE 283

Query: 960  RNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKNFQGAGMNLQD 781
            RNG  PTFAQWA AAG+D + LR RLNYG  CKDKMI SNIRLVISIAKN+Q AGMNLQD
Sbjct: 284  RNGCQPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQD 343

Query: 780  LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 601
            LVQEGCRGL+KGAEKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRV
Sbjct: 344  LVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRV 403

Query: 600  REARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGINQTLKPSEVI 421
            REA+KQLYSENGR P+ EE+ EA+GL+ KR +AVML PKAPRSLDQKIGINQTLKPSEVI
Sbjct: 404  REAKKQLYSENGRHPDHEEVAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKPSEVI 463

Query: 420  ADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTLQEIGELMGVS 241
            ADPDA T+E+IL++Q M++DLNKVLD+LNPREK+V+RWRFGLEDGR+KTLQEIGELMGVS
Sbjct: 464  ADPDAETSEDILIKQFMREDLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGELMGVS 523

Query: 240  RERIRQIESCAFRKLKNKKRTTN 172
            RERIRQIE CAFRKLK+KKRT N
Sbjct: 524  RERIRQIEFCAFRKLKSKKRTKN 546


>ref|XP_015577772.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Ricinus
            communis]
          Length = 579

 Score =  542 bits (1396), Expect = 0.0
 Identities = 311/571 (54%), Positives = 358/571 (62%), Gaps = 18/571 (3%)
 Frame = -2

Query: 1836 MACLAPQFKCPSYSFHHHHQ----------RQQVKPRGPFGFRSRCV-----SSQMTAVI 1702
            M+CL PQFKC   +F  H +          +   K R P  +R++C+      S  TAV+
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTAKSREPIYYRAQCILSTTSPSTSTAVL 61

Query: 1701 DLDKTYVPTLEAHTTSSAVTQRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXXXXX 1522
            DL+K  +P+ EA + S A     +YV AIGPP +  + +T  T                 
Sbjct: 62   DLEKLRLPSFEAPSDSIAPNSPWTYVRAIGPPKEATFGSTLATETLITSDEAVIAAAAAE 121

Query: 1521 XXXXXXXXXXXXXXXAQMIGNDSFVKLEKSEGFPSQAGIFQSXXXXXXXXXXXDMMN--- 1351
                           A ++ N  F   E      S + I  S            ++    
Sbjct: 122  AVALARAAVKVAKDAALLVKN--FPSAETESKLTSPSTIDASRWPQFTETERARIIGDSV 179

Query: 1350 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQDSENITVRSWRQIEXXXXXXXXXXX 1171
              ET  +E  +  +  K+     L   EL+L Q Q SE I VRS RQ E           
Sbjct: 180  ATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEK 239

Query: 1170 XXXXXXXXXXXXXXXXXXXXAQEVDYSDPLRYLRGXXXXXXXXXXXXXXXXXEGIQDLIK 991
                                 QEVDYSDPLRYLRG                   IQDL+K
Sbjct: 240  AASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLK 299

Query: 990  LESLQEELAERNGSPPTFAQWATAAGVDPRTLRTRLNYGRSCKDKMIKSNIRLVISIAKN 811
            LE LQEELAER G  PTFAQWA AAGVD RTLR R+N+G  CKDKMIKSNIRLVISIAKN
Sbjct: 300  LERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKN 359

Query: 810  FQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 631
            +QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 360  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 419

Query: 630  FHMVEATYRVREARKQLYSENGRQPNDEEILEATGLTRKRLSAVMLIPKAPRSLDQKIGI 451
            FHMVEATYRV+EARKQLYSENGR P+DEE+ EA GL+ KRLSAV+L PKAPRSLDQKIG+
Sbjct: 420  FHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGM 479

Query: 450  NQTLKPSEVIADPDALTTEEILVRQLMKQDLNKVLDSLNPREKQVLRWRFGLEDGRIKTL 271
            N  LKPSEVIADP+A T EE+L++Q MKQDL KVL++LNPRE QV+RWRFGLEDGR+KTL
Sbjct: 480  NMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTL 539

Query: 270  QEIGELMGVSRERIRQIESCAFRKLKNKKRT 178
            QEIGE+MGVSRERIRQIES AFRKLKNKKRT
Sbjct: 540  QEIGEIMGVSRERIRQIESSAFRKLKNKKRT 570