BLASTX nr result
ID: Ophiopogon26_contig00009103
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00009103
(3422 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [As... 1404 0.0
gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagu... 1404 0.0
ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV su... 1159 0.0
ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV su... 1152 0.0
ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV su... 1131 0.0
ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV su... 1020 0.0
ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV su... 1020 0.0
ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 iso... 986 0.0
ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 iso... 986 0.0
gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas ... 986 0.0
ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 iso... 934 0.0
ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV su... 933 0.0
ref|XP_019055893.1| PREDICTED: DNA-directed RNA polymerase IV su... 927 0.0
ref|XP_019055894.1| PREDICTED: DNA-directed RNA polymerase IV su... 927 0.0
ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV su... 927 0.0
ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 iso... 928 0.0
ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 iso... 928 0.0
ref|XP_020394617.1| DNA dependent RNA polymerase D largest subun... 918 0.0
ref|XP_019055892.1| PREDICTED: DNA-directed RNA polymerase IV su... 927 0.0
ref|XP_019055891.1| PREDICTED: DNA-directed RNA polymerase IV su... 927 0.0
>ref|XP_020262150.1| DNA-directed RNA polymerase IV subunit 1 [Asparagus officinalis]
Length = 1529
Score = 1404 bits (3635), Expect = 0.0
Identities = 713/1066 (66%), Positives = 844/1066 (79%), Gaps = 4/1066 (0%)
Frame = +3
Query: 6 NRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFV 185
N+ LEDGDIIMVNRNPSVHPHSLLALSVKILPV+ VSINPLCCAPLLGDFDGDCLHGFV
Sbjct: 480 NKPLEDGDIIMVNRNPSVHPHSLLALSVKILPVKDVVSINPLCCAPLLGDFDGDCLHGFV 539
Query: 186 PQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEM 365
PQS+ ARV FN Q G+SLLSLTHDSLTAAHLLME E+F +K EMQQL M
Sbjct: 540 PQSIGARVELKELLSLDSQLFNYQGGQSLLSLTHDSLTAAHLLMEDEIFLNKREMQQLNM 599
Query: 366 LFPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSF 545
L P +FP +IKAP ++MP+WTG QLFSM+LP++M+F+ SS E+ GDLVP GVS
Sbjct: 600 LCPWNLEFPTVIKAPTIEMPQWTGWQLFSMLLPIDMDFAPASSSFEIRKGDLVPPSGVSS 659
Query: 546 SS----RNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYT 713
SS + IS +FSRMFECYG +A+ YLF FQE+LCEYLTMRGLSVSLHD+YL S+ YT
Sbjct: 660 SSSSSSQKIISEIFSRMFECYGGKAHEYLFHFQEILCEYLTMRGLSVSLHDIYLASNAYT 719
Query: 714 RNKLIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPIS 893
R KLI+EVS ALEEAK S F+ELMLEP +G ++K HDE++DLSHT+++SN R R P+S
Sbjct: 720 RTKLINEVSCALEEAKGSFRFSELMLEPMVGFLLKEHDESDDLSHTIDVSNITRTR-PMS 778
Query: 894 QASIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLP 1073
+ASIAKFKD+FRDLQ+VV +Y+S++NSLFTMM AGSKGSL K S K LP
Sbjct: 779 EASIAKFKDIFRDLQNVVHHYVSADNSLFTMMRAGSKGSLLKLVQQGLCLGLQLSTKTLP 838
Query: 1074 FSIPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSC 1253
F+IPL+LSC WN+HKAF+RS+ +D S+ S GENSYAVIEASFLDGL+PLECF HAL+C
Sbjct: 839 FTIPLELSCFAWNEHKAFNRSVSEKDESDFSRGENSYAVIEASFLDGLNPLECFFHALAC 898
Query: 1254 RSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDH 1433
R+NMFSENA++PGTLTRKIMF+MRDI VAYDGTVRN+YGQQ+VQFS+ SP +KS +
Sbjct: 899 RANMFSENAQVPGTLTRKIMFHMRDIYVAYDGTVRNSYGQQVVQFSHQSPYEKS----RN 954
Query: 1434 SHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTR 1613
S FSI EDS +L G PVGSLAACSISEAAYGALD PVNSLESSPLLNLKKVLEC P +
Sbjct: 955 SQFSI-EDS---QLSGQPVGSLAACSISEAAYGALDTPVNSLESSPLLNLKKVLECVPGK 1010
Query: 1614 TSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGM 1793
TS RTASL LSNKL++LNYGFEYGALAV++HLD+VFFSD+VTSVMIFY+A D K TKG
Sbjct: 1011 TSTERTASLVLSNKLRKLNYGFEYGALAVRDHLDKVFFSDVVTSVMIFYAARDIKETKGP 1070
Query: 1794 RLSPWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRKLPRLFMTSQSCVLGNEQK 1973
+LSPWV HFH+NKE + +K I+ QSIVDAL+GNY+ FREG+ LPRLFMT Q+C+L N K
Sbjct: 1071 KLSPWVSHFHINKERMAKKGIHAQSIVDALSGNYHLFREGKMLPRLFMTCQNCLLDNA-K 1129
Query: 1974 NHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
N EE CI V A +D SPT+LD IRD+V+PVLLQTLIKGF EFKQVDILWDS
Sbjct: 1130 NFEESCILVTA--------EDYNSPTILDIIRDTVIPVLLQTLIKGFTEFKQVDILWDSH 1181
Query: 2154 PKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSY 2333
KPDG+L +K+ M +SC R FW LQ+AC+PIMD+IDW RS PDG +DIS+ FGI+S+Y
Sbjct: 1182 SKPDGELIVKVTMAKSCALRNFWHALQNACIPIMDLIDWGRSHPDGVYDISNAFGIVSAY 1241
Query: 2334 SYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQA 2513
+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVTGEFHGL+AK +KQQ+AHLSIS+PFT+A
Sbjct: 1242 NYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVTGEFHGLTAKALKQQKAHLSISAPFTEA 1301
Query: 2514 CFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIY 2693
CFSNPEK FI+AAK D+L GTVDAVAWGQEAPVGTGG FK++YSGK H PK ++N+Y
Sbjct: 1302 CFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQEAPVGTGGSFKLMYSGKAHIPKPSDNVY 1361
Query: 2694 EILLKQKHDSSSQIPGADKWKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASVRI 2873
E LL K D Q P ADKW + V + GSM+ W+ N T++K+ V SS+ S+ I
Sbjct: 1362 ETLLSLKSDKPWQTPNADKW-WRGAVSNISGSMKTWDGFNFTSEKKTMVRSSSKSDSMPI 1420
Query: 2874 GSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHS 3053
GSW +I AM S+L R+LHQY ++H LNE DKSL++EALMYHPKKDA
Sbjct: 1421 GSWSSIEAMRSALRRILHQYSIDHHLNEVDKSLVIEALMYHPKKDAKIGCGIKEIKVGCG 1480
Query: 3054 PFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEKEL 3191
P+HP++RCFILIR+DGTTEDFSY KCV EAA Q+S EF L + +L
Sbjct: 1481 PYHPETRCFILIRSDGTTEDFSYHKCVNEAARQLSIEFKLTKKSDL 1526
>gb|ONK73338.1| uncharacterized protein A4U43_C04F29910 [Asparagus officinalis]
Length = 1445
Score = 1404 bits (3635), Expect = 0.0
Identities = 713/1066 (66%), Positives = 844/1066 (79%), Gaps = 4/1066 (0%)
Frame = +3
Query: 6 NRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFV 185
N+ LEDGDIIMVNRNPSVHPHSLLALSVKILPV+ VSINPLCCAPLLGDFDGDCLHGFV
Sbjct: 396 NKPLEDGDIIMVNRNPSVHPHSLLALSVKILPVKDVVSINPLCCAPLLGDFDGDCLHGFV 455
Query: 186 PQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEM 365
PQS+ ARV FN Q G+SLLSLTHDSLTAAHLLME E+F +K EMQQL M
Sbjct: 456 PQSIGARVELKELLSLDSQLFNYQGGQSLLSLTHDSLTAAHLLMEDEIFLNKREMQQLNM 515
Query: 366 LFPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSF 545
L P +FP +IKAP ++MP+WTG QLFSM+LP++M+F+ SS E+ GDLVP GVS
Sbjct: 516 LCPWNLEFPTVIKAPTIEMPQWTGWQLFSMLLPIDMDFAPASSSFEIRKGDLVPPSGVSS 575
Query: 546 SS----RNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYT 713
SS + IS +FSRMFECYG +A+ YLF FQE+LCEYLTMRGLSVSLHD+YL S+ YT
Sbjct: 576 SSSSSSQKIISEIFSRMFECYGGKAHEYLFHFQEILCEYLTMRGLSVSLHDIYLASNAYT 635
Query: 714 RNKLIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPIS 893
R KLI+EVS ALEEAK S F+ELMLEP +G ++K HDE++DLSHT+++SN R R P+S
Sbjct: 636 RTKLINEVSCALEEAKGSFRFSELMLEPMVGFLLKEHDESDDLSHTIDVSNITRTR-PMS 694
Query: 894 QASIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLP 1073
+ASIAKFKD+FRDLQ+VV +Y+S++NSLFTMM AGSKGSL K S K LP
Sbjct: 695 EASIAKFKDIFRDLQNVVHHYVSADNSLFTMMRAGSKGSLLKLVQQGLCLGLQLSTKTLP 754
Query: 1074 FSIPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSC 1253
F+IPL+LSC WN+HKAF+RS+ +D S+ S GENSYAVIEASFLDGL+PLECF HAL+C
Sbjct: 755 FTIPLELSCFAWNEHKAFNRSVSEKDESDFSRGENSYAVIEASFLDGLNPLECFFHALAC 814
Query: 1254 RSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDH 1433
R+NMFSENA++PGTLTRKIMF+MRDI VAYDGTVRN+YGQQ+VQFS+ SP +KS +
Sbjct: 815 RANMFSENAQVPGTLTRKIMFHMRDIYVAYDGTVRNSYGQQVVQFSHQSPYEKS----RN 870
Query: 1434 SHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTR 1613
S FSI EDS +L G PVGSLAACSISEAAYGALD PVNSLESSPLLNLKKVLEC P +
Sbjct: 871 SQFSI-EDS---QLSGQPVGSLAACSISEAAYGALDTPVNSLESSPLLNLKKVLECVPGK 926
Query: 1614 TSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGM 1793
TS RTASL LSNKL++LNYGFEYGALAV++HLD+VFFSD+VTSVMIFY+A D K TKG
Sbjct: 927 TSTERTASLVLSNKLRKLNYGFEYGALAVRDHLDKVFFSDVVTSVMIFYAARDIKETKGP 986
Query: 1794 RLSPWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRKLPRLFMTSQSCVLGNEQK 1973
+LSPWV HFH+NKE + +K I+ QSIVDAL+GNY+ FREG+ LPRLFMT Q+C+L N K
Sbjct: 987 KLSPWVSHFHINKERMAKKGIHAQSIVDALSGNYHLFREGKMLPRLFMTCQNCLLDNA-K 1045
Query: 1974 NHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
N EE CI V A +D SPT+LD IRD+V+PVLLQTLIKGF EFKQVDILWDS
Sbjct: 1046 NFEESCILVTA--------EDYNSPTILDIIRDTVIPVLLQTLIKGFTEFKQVDILWDSH 1097
Query: 2154 PKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSY 2333
KPDG+L +K+ M +SC R FW LQ+AC+PIMD+IDW RS PDG +DIS+ FGI+S+Y
Sbjct: 1098 SKPDGELIVKVTMAKSCALRNFWHALQNACIPIMDLIDWGRSHPDGVYDISNAFGIVSAY 1157
Query: 2334 SYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQA 2513
+YFL SLKS +SDIGRNIHLEHLLLVSDSLSVTGEFHGL+AK +KQQ+AHLSIS+PFT+A
Sbjct: 1158 NYFLRSLKSTISDIGRNIHLEHLLLVSDSLSVTGEFHGLTAKALKQQKAHLSISAPFTEA 1217
Query: 2514 CFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIY 2693
CFSNPEK FI+AAK D+L GTVDAVAWGQEAPVGTGG FK++YSGK H PK ++N+Y
Sbjct: 1218 CFSNPEKSFIDAAKQGLADNLQGTVDAVAWGQEAPVGTGGSFKLMYSGKAHIPKPSDNVY 1277
Query: 2694 EILLKQKHDSSSQIPGADKWKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASVRI 2873
E LL K D Q P ADKW + V + GSM+ W+ N T++K+ V SS+ S+ I
Sbjct: 1278 ETLLSLKSDKPWQTPNADKW-WRGAVSNISGSMKTWDGFNFTSEKKTMVRSSSKSDSMPI 1336
Query: 2874 GSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHS 3053
GSW +I AM S+L R+LHQY ++H LNE DKSL++EALMYHPKKDA
Sbjct: 1337 GSWSSIEAMRSALRRILHQYSIDHHLNEVDKSLVIEALMYHPKKDAKIGCGIKEIKVGCG 1396
Query: 3054 PFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEKEL 3191
P+HP++RCFILIR+DGTTEDFSY KCV EAA Q+S EF L + +L
Sbjct: 1397 PYHPETRCFILIRSDGTTEDFSYHKCVNEAARQLSIEFKLTKKSDL 1442
>ref|XP_017700627.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Phoenix dactylifera]
ref|XP_017700628.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Phoenix dactylifera]
Length = 1567
Score = 1159 bits (2998), Expect = 0.0
Identities = 606/1109 (54%), Positives = 766/1109 (69%), Gaps = 44/1109 (3%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+ D+I+VNR PSVH HSL+ALSVKILP++S VSINPLCCAPLLGDFDGDCLHG+VP
Sbjct: 475 RPLENDDLILVNRPPSVHQHSLIALSVKILPIQSVVSINPLCCAPLLGDFDGDCLHGYVP 534
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QSV RV N QDGRSL+SL+HDSLTAAHLL VF +KFEMQQ EML
Sbjct: 535 QSVHCRVELGELVSLDHQLLNAQDGRSLVSLSHDSLTAAHLLTNSIVFLNKFEMQQFEML 594
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P +S P+IIKAP + P WTG+QLFSM+LP M+FS S+ + + G+++ + G SF
Sbjct: 595 CPSQSPSPSIIKAPTTRSPLWTGQQLFSMLLPPTMDFSMGSNKIPISKGEVLSTSGASFW 654
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
+N S +FS MF+CYG +A ++LFS QEVLCEYLT RGLSVSL D+YL+SD Y+R K+
Sbjct: 655 LQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTTRGLSVSLGDVYLSSDLYSRRKMT 714
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
DEV + LEEA+ +CH +LML+PE+ ++K+HD T N N+AR ++ ISQ SIA
Sbjct: 715 DEVCYGLEEAEDACHIKQLMLDPEMEFLLKSHDGT-----CRNPYNYARNQKHISQFSIA 769
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
F+D+F DLQ+V+ YIS +NS+ M++AGSKGSL+K A PLPF IP
Sbjct: 770 AFRDVFYDLQNVIHQYISRDNSMLAMIHAGSKGSLSKLVQQGACLGLQLPASPLPFRIPR 829
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC N K + + QD G+NSYAV++ASFLDGL+PLECFVHA++ RSNMF
Sbjct: 830 RLSCVSLNAQKKLEYGIP-QDVVECVRGQNSYAVVKASFLDGLNPLECFVHAITGRSNMF 888
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
SENAELPG LTRK+MFYMRD+ AYDGTVR+ YGQQLVQFSY P + S E D +
Sbjct: 889 SENAELPGMLTRKLMFYMRDLYAAYDGTVRSTYGQQLVQFSYNIPGESSSEQGDSCTMNG 948
Query: 1449 GEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSVNR 1628
+D+ +RLGG PVGS A+C+ISEAAYGALDHP+NSLE+SPLLNLKKVLEC +R SV++
Sbjct: 949 EKDAENNRLGGQPVGSWASCAISEAAYGALDHPMNSLEASPLLNLKKVLECGKSRASVDK 1008
Query: 1629 TASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPW 1808
+AS+ LS LK+ YGFEYGAL VKNHLDRV FSD+VT+V+IFY+ D +GTK SPW
Sbjct: 1009 SASIFLSKGLKKQRYGFEYGALEVKNHLDRVLFSDLVTTVLIFYAGLDVQGTK---FSPW 1065
Query: 1809 VLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKNHE 1982
+ HFHV+KE ++RKR+ VQ+I+D L+ NYN RE G +LP L +TS+ C L + Q H+
Sbjct: 1066 ITHFHVSKERMMRKRLRVQTIIDQLSANYNFVRETVGTELPGLRITSKDCSLIDIQNEHD 1125
Query: 1983 ELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKP 2162
E + V++ E + Q LDTIRD ++P+LL+TL+KGF EFK+V+IL D QP
Sbjct: 1126 ETFCIMVLVDTPESEIQ-------LDTIRDVLVPLLLETLVKGFWEFKKVEILCDIQPDS 1178
Query: 2163 DGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSYSYF 2342
+LFL++ M E C P KFW LQ+AC+PIMD+IDWE S P+ +DI ++GI +++ YF
Sbjct: 1179 LDELFLRVSMSEKCLPGKFWSALQNACIPIMDLIDWEHSHPNSMYDIFSIYGIDAAWKYF 1238
Query: 2343 LGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFS 2522
L LKSA SD GR IH EHLL+ +D LSVTGEFHGLS KG+K+QR SISSPFT AC S
Sbjct: 1239 LRHLKSATSDTGRCIHEEHLLMAADCLSVTGEFHGLSIKGLKKQRDQASISSPFTLACLS 1298
Query: 2523 NPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIYEIL 2702
NP FI AAK S DHL GT+DA+AWG+EAPVGTGGPF+IIYSGKVH+P++TENIY+ L
Sbjct: 1299 NPGYGFINAAKQGSVDHLGGTLDAMAWGKEAPVGTGGPFEIIYSGKVHNPQKTENIYKTL 1358
Query: 2703 LKQKHDSSSQIPG----------ADKWKGQPGVDSAGGS--------------------- 2789
L K + Q + KWK + + + G S
Sbjct: 1359 LNFKVEKPWQDDNKLCRHGDRNVSTKWKHKRILSNTGASTGESIDQLISEEAHTRQGCPC 1418
Query: 2790 ---MRRWNEHN--------CTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYP 2936
+ +W + ++ + + FS++ A GSW NI M S+L +LH+YP
Sbjct: 1419 EYPVNKWERQSKGHVVSSSVSSNSDAKMGFSTKSALRSAGSWANIVDMCSNLRTILHEYP 1478
Query: 2937 VNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
+N LNE DKS LMEAL YHPK+DA HSP HP SRCF+L+RNDGTTEDF
Sbjct: 1479 INGYLNETDKSCLMEALSYHPKRDAKMGTGIQGIKIGHSPLHPGSRCFVLVRNDGTTEDF 1538
Query: 3117 SYRKCVIEAANQISPEFGLMVEKELDPRQ 3203
SYRKC+I AA ISPEFG MVEK++ R+
Sbjct: 1539 SYRKCIIGAAYSISPEFGSMVEKKMSWRR 1567
>ref|XP_017700629.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Phoenix dactylifera]
Length = 1566
Score = 1152 bits (2981), Expect = 0.0
Identities = 605/1109 (54%), Positives = 765/1109 (68%), Gaps = 44/1109 (3%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+ D+I+VNR PSVH HSL+ALSVKILP++S VSINPLCCAPLLGDFDGDCLHG+VP
Sbjct: 475 RPLENDDLILVNRPPSVHQHSLIALSVKILPIQSVVSINPLCCAPLLGDFDGDCLHGYVP 534
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QSV RV N QDGRSL+SL+HDSLTAAHLL VF +KFEMQQ EML
Sbjct: 535 QSVHCRVELGELVSLDHQLLNAQDGRSLVSLSHDSLTAAHLLTNSIVFLNKFEMQQFEML 594
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P +S P+IIKAP + P WTG+QLFSM+LP M+FS S+ + + G+++ + G SF
Sbjct: 595 CPSQSPSPSIIKAPTTRSPLWTGQQLFSMLLPPTMDFSMGSNKIPISKGEVLSTSGASFW 654
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
+N S +FS MF+CYG +A ++LFS QEVLCEYLT RGLSVSL D+YL+SD Y+R K+
Sbjct: 655 LQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTTRGLSVSLGDVYLSSDLYSRRKMT 714
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
DEV + LEEA+ +CH +LML+PE+ ++K+HD T N N+AR ++ ISQ SIA
Sbjct: 715 DEVCYGLEEAEDACHIKQLMLDPEMEFLLKSHDGT-----CRNPYNYARNQKHISQFSIA 769
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
F+D+F DLQ+V+ YIS +NS+ M++AGSKGSL+K A PLPF IP
Sbjct: 770 AFRDVFYDLQNVIHQYISRDNSMLAMIHAGSKGSLSKLVQQGACLGLQLPASPLPFRIPR 829
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC N K + + QD G+NSYAV++ASFLDGL+PLECFVHA++ RSNMF
Sbjct: 830 RLSCVSLNAQKKLEYGIP-QDVVECVRGQNSYAVVKASFLDGLNPLECFVHAITGRSNMF 888
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
SENAELPG LTRK+MFYMRD+ AYDGTVR+ YGQQLVQFSY P + S E D +
Sbjct: 889 SENAELPGMLTRKLMFYMRDLYAAYDGTVRSTYGQQLVQFSYNIPGESSSEQGDSCTMNG 948
Query: 1449 GEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSVNR 1628
+D+ +RLGG PVGS A+C+ISEAAYGALDHP+NSLE+SPLLNLK VLEC +R SV++
Sbjct: 949 EKDAENNRLGGQPVGSWASCAISEAAYGALDHPMNSLEASPLLNLK-VLECGKSRASVDK 1007
Query: 1629 TASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSPW 1808
+AS+ LS LK+ YGFEYGAL VKNHLDRV FSD+VT+V+IFY+ D +GTK SPW
Sbjct: 1008 SASIFLSKGLKKQRYGFEYGALEVKNHLDRVLFSDLVTTVLIFYAGLDVQGTK---FSPW 1064
Query: 1809 VLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKNHE 1982
+ HFHV+KE ++RKR+ VQ+I+D L+ NYN RE G +LP L +TS+ C L + Q H+
Sbjct: 1065 ITHFHVSKERMMRKRLRVQTIIDQLSANYNFVRETVGTELPGLRITSKDCSLIDIQNEHD 1124
Query: 1983 ELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPKP 2162
E + V++ E + Q LDTIRD ++P+LL+TL+KGF EFK+V+IL D QP
Sbjct: 1125 ETFCIMVLVDTPESEIQ-------LDTIRDVLVPLLLETLVKGFWEFKKVEILCDIQPDS 1177
Query: 2163 DGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSYSYF 2342
+LFL++ M E C P KFW LQ+AC+PIMD+IDWE S P+ +DI ++GI +++ YF
Sbjct: 1178 LDELFLRVSMSEKCLPGKFWSALQNACIPIMDLIDWEHSHPNSMYDIFSIYGIDAAWKYF 1237
Query: 2343 LGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACFS 2522
L LKSA SD GR IH EHLL+ +D LSVTGEFHGLS KG+K+QR SISSPFT AC S
Sbjct: 1238 LRHLKSATSDTGRCIHEEHLLMAADCLSVTGEFHGLSIKGLKKQRDQASISSPFTLACLS 1297
Query: 2523 NPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIYEIL 2702
NP FI AAK S DHL GT+DA+AWG+EAPVGTGGPF+IIYSGKVH+P++TENIY+ L
Sbjct: 1298 NPGYGFINAAKQGSVDHLGGTLDAMAWGKEAPVGTGGPFEIIYSGKVHNPQKTENIYKTL 1357
Query: 2703 LKQKHDSSSQIPG----------ADKWKGQPGVDSAGGS--------------------- 2789
L K + Q + KWK + + + G S
Sbjct: 1358 LNFKVEKPWQDDNKLCRHGDRNVSTKWKHKRILSNTGASTGESIDQLISEEAHTRQGCPC 1417
Query: 2790 ---MRRWNEHN--------CTTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYP 2936
+ +W + ++ + + FS++ A GSW NI M S+L +LH+YP
Sbjct: 1418 EYPVNKWERQSKGHVVSSSVSSNSDAKMGFSTKSALRSAGSWANIVDMCSNLRTILHEYP 1477
Query: 2937 VNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
+N LNE DKS LMEAL YHPK+DA HSP HP SRCF+L+RNDGTTEDF
Sbjct: 1478 INGYLNETDKSCLMEALSYHPKRDAKMGTGIQGIKIGHSPLHPGSRCFVLVRNDGTTEDF 1537
Query: 3117 SYRKCVIEAANQISPEFGLMVEKELDPRQ 3203
SYRKC+I AA ISPEFG MVEK++ R+
Sbjct: 1538 SYRKCIIGAAYSISPEFGSMVEKKMSWRR 1566
>ref|XP_019705595.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Elaeis
guineensis]
Length = 1569
Score = 1131 bits (2925), Expect = 0.0
Identities = 595/1109 (53%), Positives = 764/1109 (68%), Gaps = 48/1109 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+GD+I+VNR PSVH HSL+ALS KILP++S VSINPLCCAPLLGDFDGDCLHG+VP
Sbjct: 475 RPLENGDLILVNRPPSVHQHSLIALSAKILPIQSVVSINPLCCAPLLGDFDGDCLHGYVP 534
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QSV RV N QDGRSL+SL+HDSLTAAHLL VF +KFEMQQLEML
Sbjct: 535 QSVHCRVELGELVSLDHQLLNAQDGRSLVSLSHDSLTAAHLLTSNIVFLNKFEMQQLEML 594
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
+ FP+IIKAP + P WTG+QLFSM+LP M+FS + +++ G+++ + GVS
Sbjct: 595 CFSRLPFPSIIKAPTTRFPLWTGQQLFSMVLPPAMDFSMGPNKIQISKGEVLSTSGVSSW 654
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
+N S +FS MF+CYG +A ++LFS QEVLCEYLT RGLSVSL D+YL+SD Y+R K+
Sbjct: 655 LQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTTRGLSVSLGDVYLSSDLYSRRKMT 714
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
DEV + LEEA+ +CH ++ML+PE+ + K+HD T N+ N+AR R+ ISQ S+A
Sbjct: 715 DEVFYGLEEAEDACHIKQIMLDPEMEFLFKSHDGT-----YRNLYNYARNRKHISQFSVA 769
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
F+D+F DLQ+V+ YIS +NS+ M++AGSKGSL+K + PLPF IP
Sbjct: 770 AFRDVFYDLQNVIHQYISRDNSMLAMIHAGSKGSLSKLVQQGACLGLQLPSSPLPFRIPR 829
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC WN K + + QD + G+NSYAV++ASFLDGL+PLECFVHA++ RSNMF
Sbjct: 830 RLSCVSWNAQKKSEHGI-PQDVVECAGGQNSYAVVKASFLDGLNPLECFVHAITGRSNMF 888
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
SENAELPG LTRK+MFYMRD+ AYDGTVR+ YGQQLVQFSY P K S E+ D S +
Sbjct: 889 SENAELPGMLTRKLMFYMRDLYAAYDGTVRSTYGQQLVQFSYNIPGKSSGEEGD-SCMTY 947
Query: 1449 GE-DSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSVN 1625
GE D+ + LGG PVGS AAC+ISEAAYGALDHP+NSLE+SPL+NLKKVL+C T+ S++
Sbjct: 948 GENDAENNSLGGQPVGSWAACAISEAAYGALDHPMNSLEASPLMNLKKVLDCGKTKASMD 1007
Query: 1626 RTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSP 1805
++AS+ LS LK+ YGFEYGAL VKNHLDRV FSD+VT+++IFY+ D +GTK SP
Sbjct: 1008 KSASIFLSKGLKKQRYGFEYGALEVKNHLDRVLFSDLVTTILIFYAGLDVQGTK---FSP 1064
Query: 1806 WVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKNH 1979
W+ HFHV+KE ++RKR+ Q+I+D L+GNYN RE G +LP L ++S+ C L + Q H
Sbjct: 1065 WITHFHVSKERMMRKRLRAQTIIDQLSGNYNFVRETVGTELPVLHISSKDCSLIDIQNEH 1124
Query: 1980 EE-LCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQP 2156
+E C++V V++ + S LDTIRD ++P+LL+TLIKGF EFK+V+IL D Q
Sbjct: 1125 DETFCVTV-LVDAPK-------SDIQLDTIRDVIIPLLLETLIKGFWEFKKVEILCDIQR 1176
Query: 2157 KPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSYS 2336
LFL++ M E C P KFW LQ+AC+PIMD+IDWE+S P+ +DI ++GI +++
Sbjct: 1177 DSLDGLFLRVTMSEKCLPGKFWSALQNACIPIMDLIDWEQSHPNSMYDIFSIYGIDAAWK 1236
Query: 2337 YFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQAC 2516
YFL LKSA SDIGR +H EHLL+ +D LSVTGEFHGLS KG+K+QR SISSPFT AC
Sbjct: 1237 YFLKYLKSATSDIGRCMHEEHLLMAADCLSVTGEFHGLSTKGLKKQRDQASISSPFTLAC 1296
Query: 2517 FSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIYE 2696
SNP FI AAK S DHL GT+DA+AWG+EAP+GTGGPF+IIYSGKVH+ ++ ENIY+
Sbjct: 1297 LSNPGNGFINAAKQGSVDHLCGTLDAMAWGKEAPIGTGGPFEIIYSGKVHNSQKNENIYK 1356
Query: 2697 ILLKQKHDSSSQIPG----------ADKWKGQPGVDSAGGS------------------- 2789
L+ K + Q + KWK + + +A S
Sbjct: 1357 TLMNFKVEKPWQDDNKLCRHGDKNVSTKWKHKRILSNADASTGESIDQLISDEACMGQGC 1416
Query: 2790 -----MRRWNE----HNCTTKKEKN------VVFSSQPASVRIGSWDNISAMSSSLSRML 2924
+ +W H ++ N + F + A GSW NI M S+L +L
Sbjct: 1417 PCENPVNKWERQSKGHLVSSNAGSNSDIKTTLGFRKRSALSSAGSWANIVDMCSNLRTIL 1476
Query: 2925 HQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGT 3104
H+YP+N LNE DKS LMEAL YHPK++A HSP HP SRCF+L+RNDGT
Sbjct: 1477 HEYPINGYLNETDKSCLMEALSYHPKREAKMGTGVQGIKIGHSPLHPGSRCFVLVRNDGT 1536
Query: 3105 TEDFSYRKCVIEAANQISPEFGLMVEKEL 3191
TEDFSYRKC+I AA IS E G ++EK++
Sbjct: 1537 TEDFSYRKCIIGAAYNISRELGSVIEKKM 1565
>ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1562
Score = 1020 bits (2638), Expect = 0.0
Identities = 553/1111 (49%), Positives = 721/1111 (64%), Gaps = 48/1111 (4%)
Frame = +3
Query: 3 LNRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGF 182
++R LE+GDII+VNR PSVH HSL+ALSV ILP++S +SINPLCCAPLLGDFDGDCLHG+
Sbjct: 468 VSRPLENGDIILVNRPPSVHQHSLIALSVMILPIQSVISINPLCCAPLLGDFDGDCLHGY 527
Query: 183 VPQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLE 362
VPQS+ RV FN QDGRSL+SLTHDSLTAA+LL F +K +MQQL
Sbjct: 528 VPQSIGCRVELQELLSLDHQLFNAQDGRSLVSLTHDSLTAAYLLTANREFLNKVDMQQLA 587
Query: 363 MLFPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVS 542
ML P PA++K P Q+P WTG QLFSM+LP M+F S + + G+++ S G S
Sbjct: 588 MLCPFPMPPPAVVKTPKFQIPLWTGEQLFSMLLPPTMDFGVNSRNM-ISKGEVMASLGGS 646
Query: 543 FSSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNK 722
F +N +GLF+ MF+ YG +A +YL QE+LCEYLT+RGLSVSL D+YL+SD Y+R K
Sbjct: 647 FWLQNTTTGLFTTMFKHYGRKALDYLCCSQELLCEYLTLRGLSVSLGDVYLSSDSYSRLK 706
Query: 723 LIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQAS 902
++DE+ F LEEA+ +C +LMLEPE+ I+ + ++ ED ++ A ER +SQ S
Sbjct: 707 MMDEIYFGLEEAEDACQVMQLMLEPEMEIL-RNQNKDEDTLDCISQYKIASERTCVSQVS 765
Query: 903 IAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSI 1082
IA FK+++ DL S + +I+ +NS+ M+ AGSKGSL K A PLPF++
Sbjct: 766 IAAFKNVYHDLLSQIYQFINKDNSMLEMIDAGSKGSLVKLIQQGACLGLQLFAHPLPFTV 825
Query: 1083 PLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSN 1262
P KL+C WN KA D G+ D + SS G++SYAVI SFLDGL+PLECFVHA+ R+N
Sbjct: 826 PSKLNCCMWNNLKALDG--GISDAAKSSCGQSSYAVIGTSFLDGLNPLECFVHAICGRAN 883
Query: 1263 MFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHF 1442
+F+ENAELPGTLTRK+MFYMRD+ +AYDGTVR+AYGQQ+V+FSY E S E +
Sbjct: 884 LFTENAELPGTLTRKLMFYMRDLYLAYDGTVRSAYGQQIVEFSYSILED-STEGGESCVA 942
Query: 1443 SIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSV 1622
G+D+ LGG PVGS AACSISEAAYG+L+ P+NSLE SPL+ LK VL+C + S
Sbjct: 943 YDGKDAEYTGLGGEPVGSWAACSISEAAYGSLEFPMNSLEYSPLMKLKMVLDCCKSNAST 1002
Query: 1623 NRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLS 1802
N TA L LS +L YG EYGAL VKNHL+RV F +++ +VMI Y HD +GT S
Sbjct: 1003 NHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDGHDVQGTN---FS 1059
Query: 1803 PWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRK--LPRLFMTSQSCVLGNEQKN 1976
PW++HFHV+K+ +LR+R+NVQ + + L +YNC RE LPRL S++C + K
Sbjct: 1060 PWIMHFHVSKDKMLRRRLNVQLVKNELIKHYNCMRERMNPMLPRLCFVSKNCSSAYKWKE 1119
Query: 1977 HEE-LCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
H++ C+SV A E+SE Q LDTIRD V+P+LL+T IKGF ++V+IL +S
Sbjct: 1120 HDDSFCMSVAA-ETSESLIQ-------LDTIRDMVIPLLLETPIKGFWASEKVEILCESL 1171
Query: 2154 PKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSY 2333
P +LFL++ M + C P FW LQ AC+PIMD+IDW+ S PD ++IS +GI +++
Sbjct: 1172 PGSGSELFLRVTMSKKCLPGSFWSDLQDACIPIMDLIDWQCSHPDNVYNISGTYGIDAAW 1231
Query: 2334 SYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQA 2513
YF+ SLKS +DIGR+IH HL + +D LSVTGEFHGLS KG++QQR +SISSPF QA
Sbjct: 1232 KYFVKSLKSVTADIGRDIHKRHLFMAADCLSVTGEFHGLSTKGLRQQRNDMSISSPFAQA 1291
Query: 2514 CFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIY 2693
C SNP CF+ AAK S DHL GT+DAVAWG+EAP GTGGPF+I+YSGKVH+ E IY
Sbjct: 1292 CLSNPVNCFVNAAKQGSMDHLSGTLDAVAWGKEAPSGTGGPFEIVYSGKVHNLTRGEGIY 1351
Query: 2694 EILLKQKHDSSSQIPGAD-------------KWKGQP-------GVDSAGGSMRRWNEH- 2810
K H +++ D KWK QP G +H
Sbjct: 1352 ----KNLHSIKAELQQGDGEVCMAANQTVPAKWKQQPKYSTNFDGAKETIDPQTSDEDHL 1407
Query: 2811 ----------NC--------------TTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSR 2918
NC K S+ +S + SW ++ M SSL
Sbjct: 1408 KERIVSKFRTNCKGYNKQQQISANDFLAKSHLTFGLRSKFSSESVSSWTDVVDMCSSLRT 1467
Query: 2919 MLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRND 3098
+L++YP++ L+E D S L+EAL YHPK+ A SP HP SRCF+L+R+D
Sbjct: 1468 ILYKYPIDGFLDEKDNSSLIEALNYHPKRAAKIGSGIQKIKVGCSPLHPGSRCFVLLRSD 1527
Query: 3099 GTTEDFSYRKCVIEAANQISPEFGLMVEKEL 3191
G+ EDFSYRKCV+ AA ISPEFG +V K++
Sbjct: 1528 GSLEDFSYRKCVVGAAKLISPEFGSIVHKKI 1558
>ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009411450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1569
Score = 1020 bits (2638), Expect = 0.0
Identities = 553/1111 (49%), Positives = 721/1111 (64%), Gaps = 48/1111 (4%)
Frame = +3
Query: 3 LNRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGF 182
++R LE+GDII+VNR PSVH HSL+ALSV ILP++S +SINPLCCAPLLGDFDGDCLHG+
Sbjct: 475 VSRPLENGDIILVNRPPSVHQHSLIALSVMILPIQSVISINPLCCAPLLGDFDGDCLHGY 534
Query: 183 VPQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLE 362
VPQS+ RV FN QDGRSL+SLTHDSLTAA+LL F +K +MQQL
Sbjct: 535 VPQSIGCRVELQELLSLDHQLFNAQDGRSLVSLTHDSLTAAYLLTANREFLNKVDMQQLA 594
Query: 363 MLFPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVS 542
ML P PA++K P Q+P WTG QLFSM+LP M+F S + + G+++ S G S
Sbjct: 595 MLCPFPMPPPAVVKTPKFQIPLWTGEQLFSMLLPPTMDFGVNSRNM-ISKGEVMASLGGS 653
Query: 543 FSSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNK 722
F +N +GLF+ MF+ YG +A +YL QE+LCEYLT+RGLSVSL D+YL+SD Y+R K
Sbjct: 654 FWLQNTTTGLFTTMFKHYGRKALDYLCCSQELLCEYLTLRGLSVSLGDVYLSSDSYSRLK 713
Query: 723 LIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQAS 902
++DE+ F LEEA+ +C +LMLEPE+ I+ + ++ ED ++ A ER +SQ S
Sbjct: 714 MMDEIYFGLEEAEDACQVMQLMLEPEMEIL-RNQNKDEDTLDCISQYKIASERTCVSQVS 772
Query: 903 IAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSI 1082
IA FK+++ DL S + +I+ +NS+ M+ AGSKGSL K A PLPF++
Sbjct: 773 IAAFKNVYHDLLSQIYQFINKDNSMLEMIDAGSKGSLVKLIQQGACLGLQLFAHPLPFTV 832
Query: 1083 PLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSN 1262
P KL+C WN KA D G+ D + SS G++SYAVI SFLDGL+PLECFVHA+ R+N
Sbjct: 833 PSKLNCCMWNNLKALDG--GISDAAKSSCGQSSYAVIGTSFLDGLNPLECFVHAICGRAN 890
Query: 1263 MFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHF 1442
+F+ENAELPGTLTRK+MFYMRD+ +AYDGTVR+AYGQQ+V+FSY E S E +
Sbjct: 891 LFTENAELPGTLTRKLMFYMRDLYLAYDGTVRSAYGQQIVEFSYSILED-STEGGESCVA 949
Query: 1443 SIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSV 1622
G+D+ LGG PVGS AACSISEAAYG+L+ P+NSLE SPL+ LK VL+C + S
Sbjct: 950 YDGKDAEYTGLGGEPVGSWAACSISEAAYGSLEFPMNSLEYSPLMKLKMVLDCCKSNAST 1009
Query: 1623 NRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLS 1802
N TA L LS +L YG EYGAL VKNHL+RV F +++ +VMI Y HD +GT S
Sbjct: 1010 NHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDGHDVQGTN---FS 1066
Query: 1803 PWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRK--LPRLFMTSQSCVLGNEQKN 1976
PW++HFHV+K+ +LR+R+NVQ + + L +YNC RE LPRL S++C + K
Sbjct: 1067 PWIMHFHVSKDKMLRRRLNVQLVKNELIKHYNCMRERMNPMLPRLCFVSKNCSSAYKWKE 1126
Query: 1977 HEE-LCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
H++ C+SV A E+SE Q LDTIRD V+P+LL+T IKGF ++V+IL +S
Sbjct: 1127 HDDSFCMSVAA-ETSESLIQ-------LDTIRDMVIPLLLETPIKGFWASEKVEILCESL 1178
Query: 2154 PKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSY 2333
P +LFL++ M + C P FW LQ AC+PIMD+IDW+ S PD ++IS +GI +++
Sbjct: 1179 PGSGSELFLRVTMSKKCLPGSFWSDLQDACIPIMDLIDWQCSHPDNVYNISGTYGIDAAW 1238
Query: 2334 SYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQA 2513
YF+ SLKS +DIGR+IH HL + +D LSVTGEFHGLS KG++QQR +SISSPF QA
Sbjct: 1239 KYFVKSLKSVTADIGRDIHKRHLFMAADCLSVTGEFHGLSTKGLRQQRNDMSISSPFAQA 1298
Query: 2514 CFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIY 2693
C SNP CF+ AAK S DHL GT+DAVAWG+EAP GTGGPF+I+YSGKVH+ E IY
Sbjct: 1299 CLSNPVNCFVNAAKQGSMDHLSGTLDAVAWGKEAPSGTGGPFEIVYSGKVHNLTRGEGIY 1358
Query: 2694 EILLKQKHDSSSQIPGAD-------------KWKGQP-------GVDSAGGSMRRWNEH- 2810
K H +++ D KWK QP G +H
Sbjct: 1359 ----KNLHSIKAELQQGDGEVCMAANQTVPAKWKQQPKYSTNFDGAKETIDPQTSDEDHL 1414
Query: 2811 ----------NC--------------TTKKEKNVVFSSQPASVRIGSWDNISAMSSSLSR 2918
NC K S+ +S + SW ++ M SSL
Sbjct: 1415 KERIVSKFRTNCKGYNKQQQISANDFLAKSHLTFGLRSKFSSESVSSWTDVVDMCSSLRT 1474
Query: 2919 MLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRND 3098
+L++YP++ L+E D S L+EAL YHPK+ A SP HP SRCF+L+R+D
Sbjct: 1475 ILYKYPIDGFLDEKDNSSLIEALNYHPKRAAKIGSGIQKIKVGCSPLHPGSRCFVLLRSD 1534
Query: 3099 GTTEDFSYRKCVIEAANQISPEFGLMVEKEL 3191
G+ EDFSYRKCV+ AA ISPEFG +V K++
Sbjct: 1535 GSLEDFSYRKCVVGAAKLISPEFGSIVHKKI 1565
>ref|XP_020084502.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Ananas comosus]
Length = 1240
Score = 986 bits (2548), Expect = 0.0
Identities = 538/1086 (49%), Positives = 707/1086 (65%), Gaps = 25/1086 (2%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+GD+I++NR PSVH HSL+ALSVK+LP+ A+SINPLCCAPLLGDFDGDCLHG++P
Sbjct: 174 RPLENGDLILINRPPSVHQHSLIALSVKVLPIHFAISINPLCCAPLLGDFDGDCLHGYIP 233
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QS+ +RV N QDGRSL+SL+HDSL AA+LL +VF SK+EMQ LEML
Sbjct: 234 QSIPSRVELRELVGLDQQLLNSQDGRSLVSLSHDSLVAAYLLTGTDVFLSKYEMQHLEML 293
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P FP+IIK P P WTG+QLF M+LP ++FS S + + +G+++ SP +SF
Sbjct: 294 CPSHMPFPSIIKYPNFGSPLWTGQQLFGMLLPPGIDFSVDSKKLHIIDGEVLSSPQMSFW 353
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
++ S +FS MF+ YG +A ++L S QE+LCEYLTMRGLSVSL D+YL SD Y+R K+
Sbjct: 354 LQSSTSSIFSTMFKSYGRRALDFLCSAQELLCEYLTMRGLSVSLSDLYLASDFYSRTKMT 413
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
+EV+F L+EA+ +C +L+L+P I ++ + DE ED S++++ +F I +ASIA
Sbjct: 414 EEVNFGLDEAEDACRVKQLLLDPRIEFLLSSLDECEDSSYSVSHYHFLSNNLQIRKASIA 473
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
FKD+F D+Q V +Y+S +NS+ +M+ +GSKGSL+K SA PF IP
Sbjct: 474 AFKDVFSDIQRTVYHYVSKDNSMLSMIQSGSKGSLSKLAQQSLCLGLQLSASTFPFRIPQ 533
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC WN+ KA + G QD E N YAVI +SFL GL+PLECF+HA+S R+N F
Sbjct: 534 QLSCSWWNKQKALE--CGDQDAIRCEERRNFYAVIRSSFLQGLNPLECFLHAISGRANFF 591
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
ENAE+PGTLTRK+ FY+RD+ VAYDGTVR+AYGQQ+VQFSY ++ ED HS I
Sbjct: 592 GENAEIPGTLTRKLSFYLRDLYVAYDGTVRSAYGQQIVQFSYDISDEIFHEDA-HSRI-I 649
Query: 1449 GEDSACDRLG--GHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSV 1622
D ++ G PVGS AA SISEAAYG L+HPVNSLE SPL+ LK++LEC RT
Sbjct: 650 SNDHIVEKYNGLGAPVGSWAASSISEAAYGGLEHPVNSLEDSPLMKLKEILECGKRRTYG 709
Query: 1623 NRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLS 1802
+ L LS L+R YGFEYGAL VKNHL+ FS++V +VMI Y + ++S
Sbjct: 710 DHAGILVLSKGLQRYRYGFEYGALEVKNHLEITLFSEMVNTVMILYEC----PLQRRKIS 765
Query: 1803 PWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKN 1976
PW HFH++KE + +KR+ VQ ++D L NY+ RE LP L +T ++C L +E
Sbjct: 766 PWSTHFHISKETLKKKRLQVQRVIDKLMENYSLMREKSAGVLPALCITKKNCPLLDE--- 822
Query: 1977 HEEL----CISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILW 2144
H+EL CI+V A + S T LDTI+D V+ +LL TL+KGF K V+I
Sbjct: 823 HDELDQTVCIAVAA--------EVLDSVTQLDTIKDVVILILLNTLVKGFLGIKHVEI-- 872
Query: 2145 DSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGI 2321
Q +PD +L LK+ M ESC +FW TLQ AC+PIMD+IDW S P+ +D V+GI
Sbjct: 873 --QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSHPESIYDTFTVYGI 930
Query: 2322 ISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSP 2501
+++ YFL SLKSA S IGR+IH E L+ V+D SVTGEFHGLS KG+KQQR LSISSP
Sbjct: 931 DAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKGLKQQRNRLSISSP 990
Query: 2502 FTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKET 2681
F+ ACFS+P FI AAK S D L G +DAV+WG+E PVGTGGPF+II+S KV +++
Sbjct: 991 FSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFEIIFSQKVPQLQKS 1050
Query: 2682 ENIYEILLKQKHDSSSQIPGA---------DKWKGQPGVDSAG--GSMRRW--NEHNCTT 2822
E+IY++L K + KW+ + G G +W N + T
Sbjct: 1051 ESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGKKDKWKCNFNKGAT 1110
Query: 2823 KKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMY 2993
+ E K + S+ ++GSW +I M +SL MLH+YP + + E DKS LMEAL Y
Sbjct: 1111 QTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVGEKDKSSLMEALKY 1170
Query: 2994 HPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGL 3173
HPK+D H P H SRCFIL+R DGT +DFSYRKCV+ AA +S EFG
Sbjct: 1171 HPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCVVGAAKMLSTEFGS 1230
Query: 3174 MVEKEL 3191
+VEK+L
Sbjct: 1231 IVEKKL 1236
>ref|XP_020084500.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
ref|XP_020084501.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Ananas comosus]
Length = 1545
Score = 986 bits (2548), Expect = 0.0
Identities = 538/1086 (49%), Positives = 707/1086 (65%), Gaps = 25/1086 (2%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+GD+I++NR PSVH HSL+ALSVK+LP+ A+SINPLCCAPLLGDFDGDCLHG++P
Sbjct: 479 RPLENGDLILINRPPSVHQHSLIALSVKVLPIHFAISINPLCCAPLLGDFDGDCLHGYIP 538
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QS+ +RV N QDGRSL+SL+HDSL AA+LL +VF SK+EMQ LEML
Sbjct: 539 QSIPSRVELRELVGLDQQLLNSQDGRSLVSLSHDSLVAAYLLTGTDVFLSKYEMQHLEML 598
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P FP+IIK P P WTG+QLF M+LP ++FS S + + +G+++ SP +SF
Sbjct: 599 CPSHMPFPSIIKYPNFGSPLWTGQQLFGMLLPPGIDFSVDSKKLHIIDGEVLSSPQMSFW 658
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
++ S +FS MF+ YG +A ++L S QE+LCEYLTMRGLSVSL D+YL SD Y+R K+
Sbjct: 659 LQSSTSSIFSTMFKSYGRRALDFLCSAQELLCEYLTMRGLSVSLSDLYLASDFYSRTKMT 718
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
+EV+F L+EA+ +C +L+L+P I ++ + DE ED S++++ +F I +ASIA
Sbjct: 719 EEVNFGLDEAEDACRVKQLLLDPRIEFLLSSLDECEDSSYSVSHYHFLSNNLQIRKASIA 778
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
FKD+F D+Q V +Y+S +NS+ +M+ +GSKGSL+K SA PF IP
Sbjct: 779 AFKDVFSDIQRTVYHYVSKDNSMLSMIQSGSKGSLSKLAQQSLCLGLQLSASTFPFRIPQ 838
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC WN+ KA + G QD E N YAVI +SFL GL+PLECF+HA+S R+N F
Sbjct: 839 QLSCSWWNKQKALE--CGDQDAIRCEERRNFYAVIRSSFLQGLNPLECFLHAISGRANFF 896
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
ENAE+PGTLTRK+ FY+RD+ VAYDGTVR+AYGQQ+VQFSY ++ ED HS I
Sbjct: 897 GENAEIPGTLTRKLSFYLRDLYVAYDGTVRSAYGQQIVQFSYDISDEIFHEDA-HSRI-I 954
Query: 1449 GEDSACDRLG--GHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSV 1622
D ++ G PVGS AA SISEAAYG L+HPVNSLE SPL+ LK++LEC RT
Sbjct: 955 SNDHIVEKYNGLGAPVGSWAASSISEAAYGGLEHPVNSLEDSPLMKLKEILECGKRRTYG 1014
Query: 1623 NRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLS 1802
+ L LS L+R YGFEYGAL VKNHL+ FS++V +VMI Y + ++S
Sbjct: 1015 DHAGILVLSKGLQRYRYGFEYGALEVKNHLEITLFSEMVNTVMILYEC----PLQRRKIS 1070
Query: 1803 PWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKN 1976
PW HFH++KE + +KR+ VQ ++D L NY+ RE LP L +T ++C L +E
Sbjct: 1071 PWSTHFHISKETLKKKRLQVQRVIDKLMENYSLMREKSAGVLPALCITKKNCPLLDE--- 1127
Query: 1977 HEEL----CISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILW 2144
H+EL CI+V A + S T LDTI+D V+ +LL TL+KGF K V+I
Sbjct: 1128 HDELDQTVCIAVAA--------EVLDSVTQLDTIKDVVILILLNTLVKGFLGIKHVEI-- 1177
Query: 2145 DSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGI 2321
Q +PD +L LK+ M ESC +FW TLQ AC+PIMD+IDW S P+ +D V+GI
Sbjct: 1178 --QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSHPESIYDTFTVYGI 1235
Query: 2322 ISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSP 2501
+++ YFL SLKSA S IGR+IH E L+ V+D SVTGEFHGLS KG+KQQR LSISSP
Sbjct: 1236 DAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKGLKQQRNRLSISSP 1295
Query: 2502 FTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKET 2681
F+ ACFS+P FI AAK S D L G +DAV+WG+E PVGTGGPF+II+S KV +++
Sbjct: 1296 FSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFEIIFSQKVPQLQKS 1355
Query: 2682 ENIYEILLKQKHDSSSQIPGA---------DKWKGQPGVDSAG--GSMRRW--NEHNCTT 2822
E+IY++L K + KW+ + G G +W N + T
Sbjct: 1356 ESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGKKDKWKCNFNKGAT 1415
Query: 2823 KKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMY 2993
+ E K + S+ ++GSW +I M +SL MLH+YP + + E DKS LMEAL Y
Sbjct: 1416 QTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVGEKDKSSLMEALKY 1475
Query: 2994 HPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGL 3173
HPK+D H P H SRCFIL+R DGT +DFSYRKCV+ AA +S EFG
Sbjct: 1476 HPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCVVGAAKMLSTEFGS 1535
Query: 3174 MVEKEL 3191
+VEK+L
Sbjct: 1536 IVEKKL 1541
>gb|OAY84267.1| DNA-directed RNA polymerase IV subunit 1 [Ananas comosus]
Length = 1556
Score = 986 bits (2548), Expect = 0.0
Identities = 538/1086 (49%), Positives = 707/1086 (65%), Gaps = 25/1086 (2%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R LE+GD+I++NR PSVH HSL+ALSVK+LP+ A+SINPLCCAPLLGDFDGDCLHG++P
Sbjct: 490 RPLENGDLILINRPPSVHQHSLIALSVKVLPIHFAISINPLCCAPLLGDFDGDCLHGYIP 549
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QS+ +RV N QDGRSL+SL+HDSL AA+LL +VF SK+EMQ LEML
Sbjct: 550 QSIPSRVELRELVGLDQQLLNSQDGRSLVSLSHDSLVAAYLLTGTDVFLSKYEMQHLEML 609
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P FP+IIK P P WTG+QLF M+LP ++FS S + + +G+++ SP +SF
Sbjct: 610 CPSHMPFPSIIKYPNFGSPLWTGQQLFGMLLPPGIDFSVDSKKLHIIDGEVLSSPQMSFW 669
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
++ S +FS MF+ YG +A ++L S QE+LCEYLTMRGLSVSL D+YL SD Y+R K+
Sbjct: 670 LQSSTSSIFSTMFKSYGRRALDFLCSAQELLCEYLTMRGLSVSLSDLYLASDFYSRTKMT 729
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASIA 908
+EV+F L+EA+ +C +L+L+P I ++ + DE ED S++++ +F I +ASIA
Sbjct: 730 EEVNFGLDEAEDACRVKQLLLDPRIEFLLSSLDECEDSSYSVSHYHFLSNNLQIRKASIA 789
Query: 909 KFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIPL 1088
FKD+F D+Q V +Y+S +NS+ +M+ +GSKGSL+K SA PF IP
Sbjct: 790 AFKDVFSDIQRTVYHYVSKDNSMLSMIQSGSKGSLSKLAQQSLCLGLQLSASTFPFRIPQ 849
Query: 1089 KLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNMF 1268
+LSC WN+ KA + G QD E N YAVI +SFL GL+PLECF+HA+S R+N F
Sbjct: 850 QLSCSWWNKQKALE--CGDQDAIRCEERRNFYAVIRSSFLQGLNPLECFLHAISGRANFF 907
Query: 1269 SENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFSI 1448
ENAE+PGTLTRK+ FY+RD+ VAYDGTVR+AYGQQ+VQFSY ++ ED HS I
Sbjct: 908 GENAEIPGTLTRKLSFYLRDLYVAYDGTVRSAYGQQIVQFSYDISDEIFHEDA-HSRI-I 965
Query: 1449 GEDSACDRLG--GHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSV 1622
D ++ G PVGS AA SISEAAYG L+HPVNSLE SPL+ LK++LEC RT
Sbjct: 966 SNDHIVEKYNGLGAPVGSWAASSISEAAYGGLEHPVNSLEDSPLMKLKEILECGKRRTYG 1025
Query: 1623 NRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLS 1802
+ L LS L+R YGFEYGAL VKNHL+ FS++V +VMI Y + ++S
Sbjct: 1026 DHAGILVLSKGLQRYRYGFEYGALEVKNHLEITLFSEMVNTVMILYEC----PLQRRKIS 1081
Query: 1803 PWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKN 1976
PW HFH++KE + +KR+ VQ ++D L NY+ RE LP L +T ++C L +E
Sbjct: 1082 PWSTHFHISKETLKKKRLQVQRVIDKLMENYSLMREKSAGVLPALCITKKNCPLLDE--- 1138
Query: 1977 HEEL----CISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILW 2144
H+EL CI+V A + S T LDTI+D V+ +LL TL+KGF K V+I
Sbjct: 1139 HDELDQTVCIAVAA--------EVLDSVTQLDTIKDVVILILLNTLVKGFLGIKHVEI-- 1188
Query: 2145 DSQPKPDG-QLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGI 2321
Q +PD +L LK+ M ESC +FW TLQ AC+PIMD+IDW S P+ +D V+GI
Sbjct: 1189 --QCQPDSTELSLKVTMSESCSRGRFWSTLQDACIPIMDLIDWNSSHPESIYDTFTVYGI 1246
Query: 2322 ISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSP 2501
+++ YFL SLKSA S IGR+IH E L+ V+D SVTGEFHGLS KG+KQQR LSISSP
Sbjct: 1247 DAAWKYFLKSLKSATSGIGRHIHQEQLVTVADCFSVTGEFHGLSTKGLKQQRNRLSISSP 1306
Query: 2502 FTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKET 2681
F+ ACFS+P FI AAK S D L G +DAV+WG+E PVGTGGPF+II+S KV +++
Sbjct: 1307 FSHACFSSPGNNFINAAKKGSVDELCGILDAVSWGKEPPVGTGGPFEIIFSQKVPQLQKS 1366
Query: 2682 ENIYEILLKQKHDSSSQIPGA---------DKWKGQPGVDSAG--GSMRRW--NEHNCTT 2822
E+IY++L K + KW+ + G G +W N + T
Sbjct: 1367 ESIYKVLHNLKVEEPKPESAVACRASNRSNSKWRLNIPTFANGHAGKKDKWKCNFNKGAT 1426
Query: 2823 KKE---KNVVFSSQPASVRIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMY 2993
+ E K + S+ ++GSW +I M +SL MLH+YP + + E DKS LMEAL Y
Sbjct: 1427 QTEGRPKKLAVQSEFLMRKVGSWASIVDMCTSLRAMLHEYPYDGIVGEKDKSSLMEALKY 1486
Query: 2994 HPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGL 3173
HPK+D H P H SRCFIL+R DGT +DFSYRKCV+ AA +S EFG
Sbjct: 1487 HPKRDEKIGVGVQDIKIGHHPTHRCSRCFILVRKDGTMDDFSYRKCVVGAAKMLSTEFGS 1546
Query: 3174 MVEKEL 3191
+VEK+L
Sbjct: 1547 IVEKKL 1552
>ref|XP_020681065.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Dendrobium
catenatum]
Length = 1499
Score = 934 bits (2414), Expect = 0.0
Identities = 516/1068 (48%), Positives = 692/1068 (64%), Gaps = 6/1068 (0%)
Frame = +3
Query: 3 LNRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGF 182
+ R L DGDI++VNR PSVH HSL+ALS KILP++S VSINPLCC+PLLGDFDGDCLHG+
Sbjct: 447 IERPLADGDIVLVNRPPSVHQHSLIALSAKILPIDSVVSINPLCCSPLLGDFDGDCLHGY 506
Query: 183 VPQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLE 362
VPQS+ RV N DGR+LLSLTHDSLTAA+LL E F +KFE+QQLE
Sbjct: 507 VPQSIHCRVELQELVSLDCQLLNGLDGRNLLSLTHDSLTAAYLLTAKEAFLNKFEIQQLE 566
Query: 363 MLFPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVS 542
M +S PAII P ++ P WTG+QL SM+ P ++ S + G+L+ P
Sbjct: 567 MFCHHQSPVPAIITGPNLESPLWTGQQLLSMLFPPLVDLYEASRTLHHFKGELLFDPQFL 626
Query: 543 FSSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNK 722
+N + +F M YG +A +YLFS QEVLCEYLTMRGL+VSL D+YLTSD YTR K
Sbjct: 627 SWLQNKPNSIFYWMSTNYGEKALDYLFSAQEVLCEYLTMRGLTVSLGDVYLTSDSYTRTK 686
Query: 723 LIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQAS 902
+ DEV+F L+EA +C E +L + + A D+ LS L + I Q S
Sbjct: 687 MTDEVNFGLQEAADACRATERLLN-KFDSSVNAIDDAAGLSLPLRLQKLTCSITRIIQES 745
Query: 903 IAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSI 1082
I FK++F D+Q + YI S NS+ M+ AGSKGSL K SA +PF+I
Sbjct: 746 ITAFKNIFSDIQYAILSYIGSNNSMLAMINAGSKGSLLKLVQQGACLGMQFSANEIPFNI 805
Query: 1083 PLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSN 1262
P LSC +WNQ K F ++ + D +N + + +AVI+AS LDGL+PLECF H+LS R+N
Sbjct: 806 PSVLSCEQWNQQKKFHQNRVLDD-ANGEDVQKHFAVIKASLLDGLNPLECFFHSLSGRAN 864
Query: 1263 MFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEK-KSCEDCDHSH 1439
+FSENA+LPGTL+RK+MFYMRD+ VAYDG+VRN YG+++VQF Y PEK K C
Sbjct: 865 LFSENAQLPGTLSRKLMFYMRDLYVAYDGSVRNVYGEEIVQFCYNFPEKGKFC------R 918
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
S ++++ GG PVGS A+CS++E AYGAL+ PVN L SPLLNLK +LE + TS
Sbjct: 919 VSSEKEASTSIPGGQPVGSWASCSLTETAYGALECPVNPLCPSPLLNLKALLETSTGTTS 978
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
TASL LSNKL+RL YGFE+GAL VK+ L+ + F++IVT++ IFY +A + L
Sbjct: 979 GVHTASLFLSNKLRRLRYGFEHGALEVKSQLEMILFAEIVTTIKIFYVRKEA---HRIGL 1035
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE-GRKLPRLFMTSQSCVLGNEQKN 1976
SPWV+HF+++KE + R+++ ++ D L +Y LP+LF+ S+ + ++ +
Sbjct: 1036 SPWVIHFYIDKERMSSTRLDMHAVKDQLLRSYEQRAALDDSLPKLFLESKYYLPDDKHEK 1095
Query: 1977 HEEL-CISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILW-DS 2150
+ CI+V AVE ++ S LLD +RD V+P LL++LIKGF E ++VDILW D+
Sbjct: 1096 PGAMNCITV-AVEFTD-------SHILLDILRDLVIPCLLKSLIKGFSEIRKVDILWDDA 1147
Query: 2151 QPKPDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISS 2330
Q +G+LFLK+ M E+C KFW ++Q+ACLPIMD+IDW RS P+ +IS +FGI +S
Sbjct: 1148 QKNSNGELFLKVTMSENCSLGKFWSSIQNACLPIMDLIDWNRSHPNDICNISSMFGISAS 1207
Query: 2331 YSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQ 2510
+ +FL SLKS D+GR++ EHL +V+D L ++GEFHGL+ KG+K QR + + SSPFT
Sbjct: 1208 WLFFLRSLKSTALDVGRSVRQEHLNIVADRLFISGEFHGLNKKGLKVQRDYTTTSSPFTF 1267
Query: 2511 ACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENI 2690
ACFSNP CFI+AAK D L GT+ A++WG+E+P GTGGPFKIIYSGKV +PKE E+I
Sbjct: 1268 ACFSNPASCFIDAAKQDYEDSLRGTIGAISWGKESPTGTGGPFKIIYSGKVCNPKEGESI 1327
Query: 2691 YEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASV- 2867
Y +L Q K G+P S + W++ NC T+ E + F+ Q +
Sbjct: 1328 YSMLQCQDI--------IRKKMGKPLHVGDICSSKNWDQ-NCCTQYEGHTDFAFQRKFLA 1378
Query: 2868 -RIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXX 3044
R GS+ +I M S+L +L +YP+N + AD+ +LM+AL HP DA
Sbjct: 1379 HRNGSYTHIINMESTLRAILLKYPINRYVTAADREILMKALARHPSSDAKIGTGVQDIKV 1438
Query: 3045 XHSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEKE 3188
+S H S+CFIL+R DGTTEDFSY KCV AA Q+SPE + EK+
Sbjct: 1439 GYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQVSPECAAIFEKK 1486
>ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4
[Nelumbo nucifera]
Length = 1489
Score = 933 bits (2412), Expect = 0.0
Identities = 507/1089 (46%), Positives = 693/1089 (63%), Gaps = 37/1089 (3%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 416 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 475
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 476 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 535
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 536 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 595
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 596 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 655
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 656 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 714
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 715 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 774
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 775 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 827
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 828 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 885
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 886 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 945
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 946 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 1002
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 1003 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 1062
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 1063 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 1115
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 1116 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1175
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1176 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1235
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1236 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1295
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1296 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1348
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1349 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1408
Query: 2958 ADKSLLMEALMYHPKKDAXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDFSYRKCVI 3137
DKS+L+ AL +HPK++ + H +SRCF+L+R DGT EDFSYRKC++
Sbjct: 1409 VDKSILLRALYFHPKRNQKMGTGPKDIKVGYHSEHQQSRCFMLVRTDGTIEDFSYRKCIL 1468
Query: 3138 EAANQISPE 3164
A +I P+
Sbjct: 1469 GALEKICPQ 1477
>ref|XP_019055893.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X5
[Nelumbo nucifera]
Length = 1375
Score = 927 bits (2396), Expect = 0.0
Identities = 509/1096 (46%), Positives = 694/1096 (63%), Gaps = 44/1096 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 296 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 355
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 356 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 415
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 416 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 475
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 476 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 535
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 536 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 594
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 595 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 654
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 655 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 707
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 708 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 765
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 766 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 825
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 826 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 882
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 883 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 942
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 943 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 995
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 996 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1055
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1056 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1115
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1116 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1175
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1176 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1228
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1229 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1288
Query: 2958 ADKSLLMEALMYHPKKD-------AXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
DKS+L+ AL +HPK++ HS H +SRCF+L+R DGT EDF
Sbjct: 1289 VDKSILLRALYFHPKRNQKMGTGPKDIKVLPRIRVGYHSE-HQQSRCFMLVRTDGTIEDF 1347
Query: 3117 SYRKCVIEAANQISPE 3164
SYRKC++ A +I P+
Sbjct: 1348 SYRKCILGALEKICPQ 1363
>ref|XP_019055894.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6
[Nelumbo nucifera]
Length = 1374
Score = 927 bits (2396), Expect = 0.0
Identities = 509/1096 (46%), Positives = 694/1096 (63%), Gaps = 44/1096 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 295 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 354
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 355 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 414
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 415 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 474
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 475 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 534
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 535 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 593
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 594 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 653
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 654 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 706
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 707 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 764
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 765 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 824
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 825 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 881
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 882 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 941
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 942 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 994
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 995 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1054
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1055 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1114
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1115 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1174
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1175 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1227
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1228 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1287
Query: 2958 ADKSLLMEALMYHPKKD-------AXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
DKS+L+ AL +HPK++ HS H +SRCF+L+R DGT EDF
Sbjct: 1288 VDKSILLRALYFHPKRNQKMGTGPKDIKVLPRIRVGYHSE-HQQSRCFMLVRTDGTIEDF 1346
Query: 3117 SYRKCVIEAANQISPE 3164
SYRKC++ A +I P+
Sbjct: 1347 SYRKCILGALEKICPQ 1362
>ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X7
[Nelumbo nucifera]
Length = 1373
Score = 927 bits (2396), Expect = 0.0
Identities = 509/1096 (46%), Positives = 694/1096 (63%), Gaps = 44/1096 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 294 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 353
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 354 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 413
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 414 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 473
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 474 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 533
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 534 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 592
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 593 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 652
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 653 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 705
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 706 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 763
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 764 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 823
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 824 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 880
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 881 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 940
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 941 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 993
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 994 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1053
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1054 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1113
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1114 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1173
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1174 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1226
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1227 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1286
Query: 2958 ADKSLLMEALMYHPKKD-------AXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
DKS+L+ AL +HPK++ HS H +SRCF+L+R DGT EDF
Sbjct: 1287 VDKSILLRALYFHPKRNQKMGTGPKDIKVLPRIRVGYHSE-HQQSRCFMLVRTDGTIEDF 1345
Query: 3117 SYRKCVIEAANQISPE 3164
SYRKC++ A +I P+
Sbjct: 1346 SYRKCILGALEKICPQ 1361
>ref|XP_020165521.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
tauschii subsp. tauschii]
ref|XP_020165522.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
tauschii subsp. tauschii]
ref|XP_020165523.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Aegilops
tauschii subsp. tauschii]
Length = 1425
Score = 928 bits (2399), Expect = 0.0
Identities = 507/1070 (47%), Positives = 682/1070 (63%), Gaps = 4/1070 (0%)
Frame = +3
Query: 3 LNRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGF 182
++R L+DGD+I++NR PS+H HSL+ LS K+LPV+S +SINPLCCAPL GDFDGDCLHG+
Sbjct: 413 VHRLLQDGDLILINRPPSIHQHSLIGLSAKLLPVQSVLSINPLCCAPLAGDFDGDCLHGY 472
Query: 183 VPQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLE 362
VPQS+++RV N QDGRSL+SLTHDSL AA+LL EV K E+QQ +
Sbjct: 473 VPQSIQSRVELGELVSLSHQLLNAQDGRSLVSLTHDSLAAAYLLTSSEVLLKKTEVQQFQ 532
Query: 363 MLFP---CKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSP 533
ML + PAI+K+ P WTG+QLFSM+LP +M FS V + +G+++ P
Sbjct: 533 MLLCHPLSPTPGPAIMKSIHSHGPLWTGKQLFSMLLPSDMSFSIEPK-VHIVDGEVLACP 591
Query: 534 GVSFSSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYT 713
SF +N ISGLFS MF+ YG +A L S Q+VLCE+LTMRGLSVSL D+YL D +
Sbjct: 592 SESFWLQNSISGLFSVMFKQYGDKALELLSSAQDVLCEFLTMRGLSVSLSDIYLFPDHDS 651
Query: 714 RNKLIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPIS 893
R KL D V+ AL++A+ + +++L P+ I+K +D+ DLS + SNF + PI
Sbjct: 652 RRKLADGVNLALDDAEEAFRIKQILLSPDSIPILKCYDDCADLSQSYEQSNFIQSNLPII 711
Query: 894 QASIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLP 1073
++SI FK +F DLQ +V + + NS+ M AGSKGS+ K A P
Sbjct: 712 KSSIMAFKSVFSDLQKMVQQHTAKNNSMMMMTNAGSKGSMLKFVQQTACVGLQLPASRFP 771
Query: 1074 FSIPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSC 1253
F IP +LSC WN+HK+ + T G+N YAVI SF GL+PLEC +H++S
Sbjct: 772 FRIPSELSCASWNRHKS-------EGTGECLGGQNLYAVIRNSFAGGLNPLECLLHSISG 824
Query: 1254 RSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDH 1433
R+N FSENA++PGTLTRK+M+++RD+ VAYDGTVR++YGQQ++QF+Y + E C D +
Sbjct: 825 RANFFSENADVPGTLTRKLMYHLRDLYVAYDGTVRSSYGQQIMQFTYDTAEDM-CSDRNV 883
Query: 1434 SHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTR 1613
GE A PVGS AACSISEAAYGALDHPVNSLE SPL+NL+ VL+C
Sbjct: 884 E----GELGA-------PVGSWAACSISEAAYGALDHPVNSLEESPLMNLQDVLKCQKGG 932
Query: 1614 TSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGM 1793
TS++ L LS LK+ YG EY +L VK+HL+ V FSD+V +VMI Y + TKG
Sbjct: 933 TSMDHVGLLFLSKNLKKYRYGLEYASLEVKDHLEPVNFSDLVDTVMILYGGCGIESTKG- 991
Query: 1794 RLSPWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRKLPRLFMTSQSCVLGNEQK 1973
SPW+ HFH+++EM+ +KR+ + +V+ L YN R+ P+++++ C +E
Sbjct: 992 --SPWITHFHLSQEMMTKKRLGLTLVVEELTEQYNAKRDKLNFPKVYISKGKCSADHECG 1049
Query: 1974 NHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
N + CI+V + S Q LDTI+ V+P LL L+KGF EFK+V+I Q
Sbjct: 1050 NRQTCCITVVTQDDSNSMSQ-------LDTIKKRVIPNLLALLVKGFLEFKKVEI----Q 1098
Query: 2154 PKPDGQLFLKIIM-EESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISS 2330
+ D +L +K++M EE C KFW TLQ +C+ IM++IDWERSRP +DI +GI S+
Sbjct: 1099 CQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWERSRPGSVYDIFCSYGIDSA 1158
Query: 2331 YSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQ 2510
+ YF+ SL+S DIGRNI EHLL+V++ LSV+G+FHGLS++G+KQQR LSISSPF++
Sbjct: 1159 WKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSSQGLKQQRTRLSISSPFSE 1218
Query: 2511 ACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENI 2690
ACFS P FI AAK SS D+L GTVDA+AWG+E GT GPFKIIYSGK H+P ENI
Sbjct: 1219 ACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGPFKIIYSGKAHAPIPNENI 1278
Query: 2691 YEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASVR 2870
Y+ L +S ++ W+ PG GS T E++ + ++
Sbjct: 1279 YDFL------NSPEV-----WQA-PGEAFLNGS---------TISVEQDFLVAT------ 1311
Query: 2871 IGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXH 3050
+G WDNI M + L ML +Y +N + E DKS ++EAL +HP+ H
Sbjct: 1312 VGIWDNIIDMRTCLQNMLREYQLNECVVELDKSRVIEALRFHPRGREKIGAGIKDIKIGH 1371
Query: 3051 SPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEKELDPR 3200
P HP +RCFI++R+DGTTEDFSY+KCV AA+ ISPE G VE+ L R
Sbjct: 1372 HPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVERILRNR 1421
>ref|XP_020165520.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Aegilops
tauschii subsp. tauschii]
Length = 1431
Score = 928 bits (2399), Expect = 0.0
Identities = 507/1070 (47%), Positives = 682/1070 (63%), Gaps = 4/1070 (0%)
Frame = +3
Query: 3 LNRSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGF 182
++R L+DGD+I++NR PS+H HSL+ LS K+LPV+S +SINPLCCAPL GDFDGDCLHG+
Sbjct: 419 VHRLLQDGDLILINRPPSIHQHSLIGLSAKLLPVQSVLSINPLCCAPLAGDFDGDCLHGY 478
Query: 183 VPQSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLE 362
VPQS+++RV N QDGRSL+SLTHDSL AA+LL EV K E+QQ +
Sbjct: 479 VPQSIQSRVELGELVSLSHQLLNAQDGRSLVSLTHDSLAAAYLLTSSEVLLKKTEVQQFQ 538
Query: 363 MLFP---CKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSP 533
ML + PAI+K+ P WTG+QLFSM+LP +M FS V + +G+++ P
Sbjct: 539 MLLCHPLSPTPGPAIMKSIHSHGPLWTGKQLFSMLLPSDMSFSIEPK-VHIVDGEVLACP 597
Query: 534 GVSFSSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYT 713
SF +N ISGLFS MF+ YG +A L S Q+VLCE+LTMRGLSVSL D+YL D +
Sbjct: 598 SESFWLQNSISGLFSVMFKQYGDKALELLSSAQDVLCEFLTMRGLSVSLSDIYLFPDHDS 657
Query: 714 RNKLIDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPIS 893
R KL D V+ AL++A+ + +++L P+ I+K +D+ DLS + SNF + PI
Sbjct: 658 RRKLADGVNLALDDAEEAFRIKQILLSPDSIPILKCYDDCADLSQSYEQSNFIQSNLPII 717
Query: 894 QASIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLP 1073
++SI FK +F DLQ +V + + NS+ M AGSKGS+ K A P
Sbjct: 718 KSSIMAFKSVFSDLQKMVQQHTAKNNSMMMMTNAGSKGSMLKFVQQTACVGLQLPASRFP 777
Query: 1074 FSIPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSC 1253
F IP +LSC WN+HK+ + T G+N YAVI SF GL+PLEC +H++S
Sbjct: 778 FRIPSELSCASWNRHKS-------EGTGECLGGQNLYAVIRNSFAGGLNPLECLLHSISG 830
Query: 1254 RSNMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDH 1433
R+N FSENA++PGTLTRK+M+++RD+ VAYDGTVR++YGQQ++QF+Y + E C D +
Sbjct: 831 RANFFSENADVPGTLTRKLMYHLRDLYVAYDGTVRSSYGQQIMQFTYDTAEDM-CSDRNV 889
Query: 1434 SHFSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTR 1613
GE A PVGS AACSISEAAYGALDHPVNSLE SPL+NL+ VL+C
Sbjct: 890 E----GELGA-------PVGSWAACSISEAAYGALDHPVNSLEESPLMNLQDVLKCQKGG 938
Query: 1614 TSVNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGM 1793
TS++ L LS LK+ YG EY +L VK+HL+ V FSD+V +VMI Y + TKG
Sbjct: 939 TSMDHVGLLFLSKNLKKYRYGLEYASLEVKDHLEPVNFSDLVDTVMILYGGCGIESTKG- 997
Query: 1794 RLSPWVLHFHVNKEMILRKRINVQSIVDALAGNYNCFREGRKLPRLFMTSQSCVLGNEQK 1973
SPW+ HFH+++EM+ +KR+ + +V+ L YN R+ P+++++ C +E
Sbjct: 998 --SPWITHFHLSQEMMTKKRLGLTLVVEELTEQYNAKRDKLNFPKVYISKGKCSADHECG 1055
Query: 1974 NHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQ 2153
N + CI+V + S Q LDTI+ V+P LL L+KGF EFK+V+I Q
Sbjct: 1056 NRQTCCITVVTQDDSNSMSQ-------LDTIKKRVIPNLLALLVKGFLEFKKVEI----Q 1104
Query: 2154 PKPDGQLFLKIIM-EESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISS 2330
+ D +L +K++M EE C KFW TLQ +C+ IM++IDWERSRP +DI +GI S+
Sbjct: 1105 CQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWERSRPGSVYDIFCSYGIDSA 1164
Query: 2331 YSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQ 2510
+ YF+ SL+S DIGRNI EHLL+V++ LSV+G+FHGLS++G+KQQR LSISSPF++
Sbjct: 1165 WKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSSQGLKQQRTRLSISSPFSE 1224
Query: 2511 ACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENI 2690
ACFS P FI AAK SS D+L GTVDA+AWG+E GT GPFKIIYSGK H+P ENI
Sbjct: 1225 ACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGPFKIIYSGKAHAPIPNENI 1284
Query: 2691 YEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASVR 2870
Y+ L +S ++ W+ PG GS T E++ + ++
Sbjct: 1285 YDFL------NSPEV-----WQA-PGEAFLNGS---------TISVEQDFLVAT------ 1317
Query: 2871 IGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXXH 3050
+G WDNI M + L ML +Y +N + E DKS ++EAL +HP+ H
Sbjct: 1318 VGIWDNIIDMRTCLQNMLREYQLNECVVELDKSRVIEALRFHPRGREKIGAGIKDIKIGH 1377
Query: 3051 SPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEKELDPR 3200
P HP +RCFI++R+DGTTEDFSY+KCV AA+ ISPE G VE+ L R
Sbjct: 1378 HPSHPGTRCFIMVRDDGTTEDFSYKKCVQAAADSISPELGRYVERILRNR 1427
>ref|XP_020394617.1| DNA dependent RNA polymerase D largest subunit isoform X3 [Zea mays]
ref|XP_020394619.1| DNA dependent RNA polymerase D largest subunit isoform X3 [Zea mays]
Length = 1174
Score = 918 bits (2372), Expect = 0.0
Identities = 501/1066 (46%), Positives = 680/1066 (63%), Gaps = 7/1066 (0%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDII++NR PSVH HSL+ALS KILP+ S VSINPLCC P GDFDGDCLHG++P
Sbjct: 148 RPLQDGDIILINRPPSVHQHSLIALSAKILPIHSVVSINPLCCTPFAGDFDGDCLHGYIP 207
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
QS+R+RV N+QDGR+L+SLTHDSL AAHLL +VF K E+QQL+ML
Sbjct: 208 QSIRSRVELEELVSLHNQLLNMQDGRNLVSLTHDSLAAAHLLTSTDVFLKKSELQQLQML 267
Query: 369 -FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSF 545
+ PA+IK+ Q WTG+QLFSM+LP M FS + + + + L S G S+
Sbjct: 268 CLSVSTPAPAVIKSMNFQGSLWTGKQLFSMLLPSGMNFSCDTELHIMDSEVLTCSLGSSW 327
Query: 546 SSRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKL 725
N SGLFS MF+ YG +A ++L S QEVLCE+LTMRGLSVSL D+Y+ SD Y+R KL
Sbjct: 328 LQNN-TSGLFSVMFKQYGCKALDFLSSAQEVLCEFLTMRGLSVSLSDLYMFSDHYSRRKL 386
Query: 726 IDEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFARERRPISQASI 905
+ V AL EA+ + +++L+P ++K HDETED+ T S+ + + ++SI
Sbjct: 387 AEGVKLALYEAEEAFRVKKILLDPINIPVLKCHDETEDV--TYRQSDCIQSNPSVIRSSI 444
Query: 906 AKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFSIP 1085
FKD+FRDL +V ++S++NS+ M+ AGSKGS+ K A PF IP
Sbjct: 445 MAFKDVFRDLLKMVQQHVSNDNSMMVMINAGSKGSMLKYAQQTACIGLQLPASKFPFRIP 504
Query: 1086 LKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRSNM 1265
+LSC WN K+ + + TS G+N YAVI+ SF++GL+PLEC +HA+S R+N
Sbjct: 505 SQLSCISWNGQKSLNYEA--ESTSERVGGQNLYAVIKNSFIEGLNPLECLLHAISGRANF 562
Query: 1266 FSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSHFS 1445
FSENA++PGTLTRK+M+++RDI VAYDGTVR++YGQQ+VQFSY S
Sbjct: 563 FSENADVPGTLTRKLMYHLRDIHVAYDGTVRSSYGQQIVQFSYDSV-------------- 608
Query: 1446 IGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTSVN 1625
D D+LG PVG AACSISEAAYGAL+HPVN LE SPL+NL++V +C S +
Sbjct: 609 ---DDLVDKLGA-PVGCRAACSISEAAYGALEHPVNGLEDSPLMNLQEVFKCHKATNSGD 664
Query: 1626 RTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRLSP 1805
L LS LK+ YG EY +L VKNHL+RV FSD+V ++MI Y HD +GM
Sbjct: 665 HIGLLFLSRHLKKYRYGLEYASLEVKNHLERVNFSDLVETIMIIYDGHDKIRNEGM---- 720
Query: 1806 WVLHFHVNKEMILRKRINVQSIVDALAGNYNCFRE--GRKLPRLFMTSQSCVLGNEQKNH 1979
W HFH+NK M+ +KR+ ++ +VD LA Y+ R+ +P + ++ + C++G+E
Sbjct: 721 WTTHFHINKAMMKKKRLGLRFVVDELAKEYDTTRDQLNNAIPSIRISRRKCLVGDEGVKS 780
Query: 1980 EELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLLQTLIKGFKEFKQVDILWDSQPK 2159
CI+V V +ER S + LDTI+ V+P +L TL+KGF EFK V+I Q
Sbjct: 781 SSCCIAV--VAHAERN-----SISQLDTIKTRVIPSILDTLLKGFLEFKDVEI----QCP 829
Query: 2160 PDGQLFLKIIMEESCPPRKFWRTLQSACLPIMDMIDWERSRPDGAHDISDVFGIISSYSY 2339
DG+L +K+ M E C +FW TLQ+AC+P+M++IDWE S+P DI +GI S++ Y
Sbjct: 830 HDGELLVKVCMSEHCKGGRFWPTLQNACIPVMELIDWELSQPSNVSDIFCSYGIDSAWKY 889
Query: 2340 FLGSLKSAVSDIGRNIHLEHLLLVSDSLSVTGEFHGLSAKGIKQQRAHLSISSPFTQACF 2519
F+ SLKSA +D GRNI EHLL+++DSLSVTG+FH LS++G+KQQR LSISSPF++ACF
Sbjct: 890 FVESLKSATTDTGRNIRREHLLVIADSLSVTGQFHALSSQGLKQQRTRLSISSPFSEACF 949
Query: 2520 SNPEKCFIEAAKHSSTDHLYGTVDAVAWGQEAPVGTGGPFKIIYSGKVHSPKETENIYEI 2699
S P + FI AAK S D+L G++DAVAWG+E GT GPF+I++SGK H P++ E+IY+
Sbjct: 950 SRPAQSFINAAKQCSVDNLCGSLDAVAWGKEPFNGTSGPFEIMHSGKPHEPEQNESIYDF 1009
Query: 2700 LLKQKHDSSSQIPGADK----WKGQPGVDSAGGSMRRWNEHNCTTKKEKNVVFSSQPASV 2867
L SS++ +K + Q +++ + + TT +
Sbjct: 1010 L------CSSKVRNFEKNHLDTRRQSTENASICRLACKSSKGSTTVNGVAITIDQDFLHA 1063
Query: 2868 RIGSWDNISAMSSSLSRMLHQYPVNHQLNEADKSLLMEALMYHPKKDAXXXXXXXXXXXX 3047
++ WDNI M +SL ML +YP+N + E DKS L+EAL +H +
Sbjct: 1064 KVSIWDNIIDMRTSLQNMLREYPLNGYVAEPDKSQLIEALKFHSRGAEKIGVGVREIKIG 1123
Query: 3048 HSPFHPKSRCFILIRNDGTTEDFSYRKCVIEAANQISPEFGLMVEK 3185
+P HP +RCFIL+RND TTEDFSY KCV AA+ ISP+ G ++K
Sbjct: 1124 LNPSHPGTRCFILLRNDDTTEDFSYHKCVQGAADSISPQLGSYLKK 1169
>ref|XP_019055892.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Nelumbo nucifera]
Length = 1493
Score = 927 bits (2396), Expect = 0.0
Identities = 509/1096 (46%), Positives = 694/1096 (63%), Gaps = 44/1096 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 414 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 473
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 474 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 533
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 534 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 593
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 594 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 653
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 654 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 712
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 713 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 772
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 773 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 825
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 826 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 883
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 884 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 943
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 944 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 1000
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 1001 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 1060
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 1061 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 1113
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 1114 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1173
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1174 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1233
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1234 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1293
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1294 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1346
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1347 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1406
Query: 2958 ADKSLLMEALMYHPKKD-------AXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
DKS+L+ AL +HPK++ HS H +SRCF+L+R DGT EDF
Sbjct: 1407 VDKSILLRALYFHPKRNQKMGTGPKDIKVLPRIRVGYHSE-HQQSRCFMLVRTDGTIEDF 1465
Query: 3117 SYRKCVIEAANQISPE 3164
SYRKC++ A +I P+
Sbjct: 1466 SYRKCILGALEKICPQ 1481
>ref|XP_019055891.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nelumbo nucifera]
Length = 1494
Score = 927 bits (2396), Expect = 0.0
Identities = 509/1096 (46%), Positives = 694/1096 (63%), Gaps = 44/1096 (4%)
Frame = +3
Query: 9 RSLEDGDIIMVNRNPSVHPHSLLALSVKILPVESAVSINPLCCAPLLGDFDGDCLHGFVP 188
R L+DGDI+++NR PSVH HSL+ALSVK+LP+ S VSINPLCC+PL GDFDGDCLHGF+
Sbjct: 415 RHLDDGDIVLINRPPSVHQHSLMALSVKVLPINSVVSINPLCCSPLSGDFDGDCLHGFIA 474
Query: 189 QSVRARVXXXXXXXXXXXXFNVQDGRSLLSLTHDSLTAAHLLMEGEVFFSKFEMQQLEML 368
Q++ RV N Q+G++LLSL+HDSL+AAHL+ + VF F+MQQL+ML
Sbjct: 475 QAIDCRVELRELVALSKQLVNGQNGQNLLSLSHDSLSAAHLVTQNGVFLDMFQMQQLKML 534
Query: 369 FPCKSQFPAIIKAPLVQMPRWTGRQLFSMMLPLNMEFSSRSSIVEVCNGDLVPSPGVSFS 548
P + Q P I+KAPL++ P WTG+QLF M+LP + ++ SS V++ NG+L+ S G S
Sbjct: 535 CPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSFDYVFPSSGVKISNGELLCSFGESSW 594
Query: 549 SRNFISGLFSRMFECYGSQANNYLFSFQEVLCEYLTMRGLSVSLHDMYLTSDPYTRNKLI 728
R+ +FS + + Y ++A ++LF+ Q+V CE+++M G SVSL D+Y+ SD ++R ++
Sbjct: 595 LRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSHSRKNML 654
Query: 729 DEVSFALEEAKSSCHFNELMLEPEIGIIIKAHDETEDLSHTLNISNFA---RERRPISQA 899
DEV L+E K + +LM++PE+ +++ +D ++ + +E + Q
Sbjct: 655 DEVRCGLQEIKKKIYIKQLMVDPEMVHLLR-YDGENTKTNGYRVDQECPSNQESVVLCQV 713
Query: 900 SIAKFKDLFRDLQSVVPYYISSENSLFTMMYAGSKGSLAKXXXXXXXXXXXXSAKPLPFS 1079
S++ F++ F D+QS++ Y S++NSL M+ AGSKG+L K ++ PL F
Sbjct: 714 SVSSFREAFHDIQSLIHQYASNDNSLLAMLKAGSKGNLLKIVQQGLCLGLQHASVPLSFQ 773
Query: 1080 IPLKLSCPEWNQHKAFDRSLGMQDTSNSSEGENSYAVIEASFLDGLSPLECFVHALSCRS 1259
IP KLSC WN K+ D S YAV+E SFLDGL+PLECFVH++S R
Sbjct: 774 IPCKLSCASWNYQKS-------HDIPACSISNIPYAVVENSFLDGLNPLECFVHSVSTRD 826
Query: 1260 NMFSENAELPGTLTRKIMFYMRDISVAYDGTVRNAYGQQLVQFSYGSPEKKSCEDCDHSH 1439
N F ENA+LPGTLTRK+MFYMRD+ +AYDGTVR AYG QLVQFSYG + S + D
Sbjct: 827 NSFGENADLPGTLTRKLMFYMRDLYIAYDGTVRTAYGNQLVQFSYGCFKGDSVQ--DPCG 884
Query: 1440 FSIGEDSACDRLGGHPVGSLAACSISEAAYGALDHPVNSLESSPLLNLKKVLECAPTRTS 1619
G +A D +GG PVGSL+ACSISEAAY ALD P++ LE SPLLNLKKVLEC S
Sbjct: 885 LFGGSPNAYDGVGGQPVGSLSACSISEAAYSALDQPISKLEISPLLNLKKVLECGQKNAS 944
Query: 1620 VNRTASLALSNKLKRLNYGFEYGALAVKNHLDRVFFSDIVTSVMIFYSAHDAKGTKGMRL 1799
++TASL LS KL R GFEYGA VKNHL+RVFFSD+V++VM+ +S + M
Sbjct: 945 ADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIFS---PQRHSQMSA 1001
Query: 1800 SPWVLHFHVNKEMILRKRINVQSIVDALAGN----------YNCFREGR----------- 1916
SPWV HFHV KEM+ R+ +N+QSI+DAL N N E R
Sbjct: 1002 SPWVCHFHVCKEMMERRGLNIQSIIDALQRNSTGEQAKINLRNILNELRKKYKLSGKQVK 1061
Query: 1917 -KLPRLFMTSQSCVLGNEQKNHEELCISVGAVESSERKEQDEPSPTLLDTIRDSVMPVLL 2093
KLP L + S+ C ++++N CI V + + +Q LDT+RD V+P L
Sbjct: 1062 IKLPNLMILSRDCTFIDQRENGRTFCIVVIVEITKDSSKQ-------LDTVRDLVVPFLS 1114
Query: 2094 QTLIKGFKEFKQVDILWDSQPK-------PDGQLFLKIIMEESCPPRKFWRTLQSACLPI 2252
+T+IKGF EFK VDILW+ P+ G+L+LK+ M E C KFW +LQ+ACLP+
Sbjct: 1115 RTVIKGFLEFKSVDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPV 1174
Query: 2253 MDMIDWERSRPDGAHDISDVFGIISSYSYFLGSLKSAVSDIGRNIHLEHLLLVSDSLSVT 2432
MD+IDWERS PD ++I +GI + + YFL SLK A+SDIG+ + LEHLLLV++SLS T
Sbjct: 1175 MDLIDWERSYPDNIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFT 1234
Query: 2433 GEFHGLSAKGIKQQRAHLSISSPFTQACFSNPEKCFIEAAKHSSTDHLYGTVDAVAWGQE 2612
GEF GLSAKGIK+Q S+SSPF QACFSNP CFI+AAK + D L G +D+V+WG++
Sbjct: 1235 GEFLGLSAKGIKRQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKK 1294
Query: 2613 APVGTGGPFKIIYSGKVHSPKETENIYEILLKQKHDSSSQIPGADKWKGQPGVDSAGGSM 2792
P+GTGG F I+YSGK +P + NIY L H+S S G + G D+
Sbjct: 1295 VPIGTGGHFDILYSGKGFTPAKPTNIYSALC---HESKSH--GENVETGL--TDACRKVC 1347
Query: 2793 RRWNEHNCTTKKE---KNVVFSSQPASV--RIGSWDNISAMSSSLSRMLHQYPVNHQLNE 2957
+W + + K+ K + P+SV I S +++ ++SSL +LH+YP+N L+E
Sbjct: 1348 CKWEKQSFYASKDPLPKGDSSENLPSSVLRSIYSREDVLKLNSSLKHILHKYPINDYLSE 1407
Query: 2958 ADKSLLMEALMYHPKKD-------AXXXXXXXXXXXXHSPFHPKSRCFILIRNDGTTEDF 3116
DKS+L+ AL +HPK++ HS H +SRCF+L+R DGT EDF
Sbjct: 1408 VDKSILLRALYFHPKRNQKMGTGPKDIKVLPRIRVGYHSE-HQQSRCFMLVRTDGTIEDF 1466
Query: 3117 SYRKCVIEAANQISPE 3164
SYRKC++ A +I P+
Sbjct: 1467 SYRKCILGALEKICPQ 1482