BLASTX nr result
ID: Ophiopogon26_contig00008608
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00008608
(778 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020241630.1| DNA-directed RNA polymerases IV and V subuni... 270 1e-87
ref|XP_020241703.1| DNA-directed RNA polymerases IV and V subuni... 266 5e-86
ref|XP_008803192.1| PREDICTED: DNA-directed RNA polymerases IV a... 228 2e-71
ref|XP_008803189.1| PREDICTED: DNA-directed RNA polymerases IV a... 228 4e-71
ref|XP_010942904.1| PREDICTED: DNA-directed RNA polymerases IV a... 228 5e-71
ref|XP_009415559.1| PREDICTED: DNA-directed RNA polymerases IV a... 209 6e-64
ref|XP_009415556.1| PREDICTED: DNA-directed RNA polymerases IV a... 192 7e-57
ref|XP_020090789.1| uncharacterized protein LOC109711870 [Ananas... 190 2e-56
gb|PAN07963.1| hypothetical protein PAHAL_A03212 [Panicum hallii... 165 4e-47
ref|XP_021315826.1| DNA-directed RNA polymerases IV and V subuni... 165 5e-47
gb|OEL38364.1| DNA-directed RNA polymerases IV and V subunit 4 [... 165 6e-47
ref|XP_004953742.1| DNA-directed RNA polymerases IV and V subuni... 164 8e-47
ref|NP_001130236.1| uncharacterized protein LOC100191330 [Zea ma... 162 6e-46
ref|XP_015688968.1| PREDICTED: DNA-directed RNA polymerases IV a... 159 2e-44
ref|XP_006647817.1| PREDICTED: DNA-directed RNA polymerases IV a... 159 2e-44
ref|XP_010236010.1| PREDICTED: DNA-directed RNA polymerases IV a... 156 2e-43
ref|XP_010236009.1| PREDICTED: DNA-directed RNA polymerases IV a... 156 3e-43
ref|XP_015627434.1| PREDICTED: DNA-directed RNA polymerase II su... 155 3e-43
gb|AQK54962.1| DNA-directed RNA polymerases IV and V subunit 4 [... 155 4e-43
ref|XP_015627433.1| PREDICTED: DNA-directed RNA polymerase II su... 155 4e-43
>ref|XP_020241630.1| DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
[Asparagus officinalis]
gb|ONK82015.1| uncharacterized protein A4U43_C01F35250 [Asparagus officinalis]
Length = 260
Score = 270 bits (690), Expect = 1e-87
Identities = 144/231 (62%), Positives = 164/231 (70%)
Frame = +1
Query: 55 KKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXX 234
KKK +VPMEED VQ+DS DS++EGFV++ N + S G+GKAPKET
Sbjct: 29 KKKGSVPMEEDGPVQIDS-DSESEGFVNSLNETLSKGNGKAPKETAKSGMKSSLDGLKTG 87
Query: 235 XXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVL 414
E P LPRA+AV P VTEVELKLEMDIP+DARV+
Sbjct: 88 TKTSLEAPATKGSSGKGGKAYSSGKAGGKGGLPRASAVKPPVTEVELKLEMDIPEDARVI 147
Query: 415 MDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEY 594
MDCE ATILQGI +SL+VLSDDP+IKMP F KALEYCK RNNYT+ ESVRQVLETLKE+
Sbjct: 148 MDCEAATILQGIQDSLSVLSDDPSIKMPPFFNKALEYCKGRNNYTNAESVRQVLETLKEH 207
Query: 595 GVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIKR 747
GVT+GEICMIGN PETI EVYALIPSLKANKHK GPI+EVLVNLA ++R
Sbjct: 208 GVTEGEICMIGNAFPETIAEVYALIPSLKANKHKIEGPIQEVLVNLAGLRR 258
>ref|XP_020241703.1| DNA-directed RNA polymerases IV and V subunit 4-like isoform X2
[Asparagus officinalis]
Length = 257
Score = 266 bits (679), Expect = 5e-86
Identities = 144/231 (62%), Positives = 164/231 (70%)
Frame = +1
Query: 55 KKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXX 234
KKK +VPMEED VQ+DS DS++EGFV++ N + S G+GKAPKET
Sbjct: 29 KKKGSVPMEEDGPVQIDS-DSESEGFVNSLNETLSKGNGKAPKETAKSGMKSSLDGLKTG 87
Query: 235 XXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVL 414
E P LPRA+AV P VTEVELKLEMDIP+DARV+
Sbjct: 88 TKTSLEAPATKGKGGKAYSSGKAGGKGG---LPRASAVKPPVTEVELKLEMDIPEDARVI 144
Query: 415 MDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEY 594
MDCE ATILQGI +SL+VLSDDP+IKMP F KALEYCK RNNYT+ ESVRQVLETLKE+
Sbjct: 145 MDCEAATILQGIQDSLSVLSDDPSIKMPPFFNKALEYCKGRNNYTNAESVRQVLETLKEH 204
Query: 595 GVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIKR 747
GVT+GEICMIGN PETI EVYALIPSLKANKHK GPI+EVLVNLA ++R
Sbjct: 205 GVTEGEICMIGNAFPETIAEVYALIPSLKANKHKIEGPIQEVLVNLAGLRR 255
>ref|XP_008803192.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Phoenix dactylifera]
Length = 239
Score = 228 bits (581), Expect = 2e-71
Identities = 118/234 (50%), Positives = 151/234 (64%)
Frame = +1
Query: 49 SLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXX 228
SLK KD+ P+ + +Q+DSSDS+ EGFVD + + + SGKA +
Sbjct: 5 SLKGKDSAPVNKTRHIQVDSSDSEYEGFVDERSPASAKASGKASSDLKSGKKKVSFESLK 64
Query: 229 XXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDAR 408
FETP LP+ATAV P +TE+ELKLE+++PK+AR
Sbjct: 65 TGRKTSFETPAAKGDWGKGGKDFNAGKAGGKGSLPQATAVKPRLTEIELKLELELPKNAR 124
Query: 409 VLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLK 588
+LMDCE A ILQ I E T+LS+DP +K P+SF K L+Y K +Y +++S R+VLETLK
Sbjct: 125 LLMDCEAAEILQEIEEHKTILSEDPKVKFPESFNKVLQYTKFGGHYINSQSARKVLETLK 184
Query: 589 EYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIKRS 750
GV DGEICMIGN+CPET+EEVYAL+PSLKANKHKN GPIREVL +LA +K S
Sbjct: 185 INGVNDGEICMIGNICPETVEEVYALLPSLKANKHKNEGPIREVLASLAKVKSS 238
>ref|XP_008803189.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Phoenix dactylifera]
ref|XP_008803190.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Phoenix dactylifera]
ref|XP_008803191.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Phoenix dactylifera]
Length = 261
Score = 228 bits (581), Expect = 4e-71
Identities = 118/234 (50%), Positives = 151/234 (64%)
Frame = +1
Query: 49 SLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXX 228
SLK KD+ P+ + +Q+DSSDS+ EGFVD + + + SGKA +
Sbjct: 27 SLKGKDSAPVNKTRHIQVDSSDSEYEGFVDERSPASAKASGKASSDLKSGKKKVSFESLK 86
Query: 229 XXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDAR 408
FETP LP+ATAV P +TE+ELKLE+++PK+AR
Sbjct: 87 TGRKTSFETPAAKGDWGKGGKDFNAGKAGGKGSLPQATAVKPRLTEIELKLELELPKNAR 146
Query: 409 VLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLK 588
+LMDCE A ILQ I E T+LS+DP +K P+SF K L+Y K +Y +++S R+VLETLK
Sbjct: 147 LLMDCEAAEILQEIEEHKTILSEDPKVKFPESFNKVLQYTKFGGHYINSQSARKVLETLK 206
Query: 589 EYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIKRS 750
GV DGEICMIGN+CPET+EEVYAL+PSLKANKHKN GPIREVL +LA +K S
Sbjct: 207 INGVNDGEICMIGNICPETVEEVYALLPSLKANKHKNEGPIREVLASLAKVKSS 260
>ref|XP_010942904.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Elaeis
guineensis]
ref|XP_010942906.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 [Elaeis
guineensis]
Length = 261
Score = 228 bits (580), Expect = 5e-71
Identities = 121/251 (48%), Positives = 157/251 (62%), Gaps = 1/251 (0%)
Frame = +1
Query: 1 ASSGGRRPRR-SQIQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKA 177
+S G+ P + + SLK KD+VP+ + +QLD SDS+ EGFVD + + S SGKA
Sbjct: 10 SSEKGKTPSNLAASKEGSLKGKDSVPVNKTRHIQLDDSDSEYEGFVDERSPASSKASGKA 69
Query: 178 PKETVXXXXXXXXXXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPA 357
+ FETP LPRATAV P
Sbjct: 70 SSDLKSGKKKVSFESLKTGRKTSFETPAAKGDWGKGGKDFNAGKAGGKGSLPRATAVKPR 129
Query: 358 VTEVELKLEMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKAR 537
+TE+ELKLE+++PK+AR+LMDCE A ILQ I E T+LS+DP +K P+SF K L+Y K
Sbjct: 130 LTEIELKLELELPKNARLLMDCEAAEILQEIEEHKTILSEDPKVKFPESFNKVLQYTKFG 189
Query: 538 NNYTDTESVRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIRE 717
++Y +++S R+VLETLK GV DGEICMIGN+CPET+EEVYAL+PSLK NKHKN PI+E
Sbjct: 190 SHYINSQSARKVLETLKINGVNDGEICMIGNICPETVEEVYALLPSLKVNKHKNEEPIKE 249
Query: 718 VLVNLANIKRS 750
VL +LA +K S
Sbjct: 250 VLASLAKVKTS 260
>ref|XP_009415559.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 258
Score = 209 bits (533), Expect = 6e-64
Identities = 113/238 (47%), Positives = 147/238 (61%)
Frame = +1
Query: 37 IQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXX 216
++ SLK ++ M+E +++DSSDS+ EGFV+ + + K+ E
Sbjct: 20 LKQGSLKGNNSGAMDESTHIEIDSSDSELEGFVEEKVPTSLNANEKSSAEQKSGKKKVSF 79
Query: 217 XXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIP 396
F+TP +P AT + P VTEVELKLE+++
Sbjct: 80 GSLKSSGKTSFDTPTAKGDLGKGGKGFSVGKAGGKGSIPEATPIKPLVTEVELKLELELL 139
Query: 397 KDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVL 576
K AR+LMDCE A +LQ I +TVLSDDP IKMP+SF+KAL+Y K +YT+ +SVRQVL
Sbjct: 140 KGARLLMDCEAAEVLQEIQGHMTVLSDDPKIKMPESFSKALQYAKINAHYTNVQSVRQVL 199
Query: 577 ETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIKRS 750
ETLK+ GVTDGEICMIGNV PET++EVYALIPSLK NKHKN G I +VL +LAN + S
Sbjct: 200 ETLKQNGVTDGEICMIGNVDPETLDEVYALIPSLKTNKHKNEGAIADVLASLANFRTS 257
>ref|XP_009415556.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 291
Score = 192 bits (489), Expect = 7e-57
Identities = 113/271 (41%), Positives = 147/271 (54%), Gaps = 33/271 (12%)
Frame = +1
Query: 37 IQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXX 216
++ SLK ++ M+E +++DSSDS+ EGFV+ + + K+ E
Sbjct: 20 LKQGSLKGNNSGAMDESTHIEIDSSDSELEGFVEEKVPTSLNANEKSSAEQKSGKKKVSF 79
Query: 217 XXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIP 396
F+TP +P AT + P VTEVELKLE+++
Sbjct: 80 GSLKSSGKTSFDTPTAKGDLGKGGKGFSVGKAGGKGSIPEATPIKPLVTEVELKLELELL 139
Query: 397 KDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVL 576
K AR+LMDCE A +LQ I +TVLSDDP IKMP+SF+KAL+Y K +YT+ +SVRQVL
Sbjct: 140 KGARLLMDCEAAEVLQEIQGHMTVLSDDPKIKMPESFSKALQYAKINAHYTNVQSVRQVL 199
Query: 577 E---------------------------------TLKEYGVTDGEICMIGNVCPETIEEV 657
E TLK+ GVTDGEICMIGNV PET++EV
Sbjct: 200 EYPLVELALVSYVVYFVTCPTEQTACLAINLSSRTLKQNGVTDGEICMIGNVDPETLDEV 259
Query: 658 YALIPSLKANKHKNGGPIREVLVNLANIKRS 750
YALIPSLK NKHKN G I +VL +LAN + S
Sbjct: 260 YALIPSLKTNKHKNEGAIADVLASLANFRTS 290
>ref|XP_020090789.1| uncharacterized protein LOC109711870 [Ananas comosus]
ref|XP_020090792.1| uncharacterized protein LOC109711870 [Ananas comosus]
gb|OAY65764.1| DNA-directed RNA polymerases IV and V subunit 4 [Ananas comosus]
Length = 247
Score = 190 bits (483), Expect = 2e-56
Identities = 107/248 (43%), Positives = 140/248 (56%)
Frame = +1
Query: 7 SGGRRPRRSQIQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKE 186
S G+ S +L +D + V +DSSD ++EGF++ + + +GKAPK+
Sbjct: 10 SAGKGKAPSVPNQGALNGEDPASFKRPVHVDIDSSD-ESEGFIEDQSQASGKSNGKAPKK 68
Query: 187 TVXXXXXXXXXXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTE 366
++ LP A P E
Sbjct: 69 VPLDGLKTGGKASNLASAGKGDS-------GKGGKSFNAGKAEGKGSLPHA---KPPTAE 118
Query: 367 VELKLEMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNY 546
V+LKLE+DIPK++RVLMDCE A +LQ IH+ +T+LS+DP IK+P+SF KA +Y K + Y
Sbjct: 119 VDLKLELDIPKNSRVLMDCEAAEVLQDIHDHMTILSEDPTIKIPESFNKAFQYSKNGSQY 178
Query: 547 TDTESVRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLV 726
TD +SVRQVLETLK GV DGEICMIGNVCPET+EE Y L+PSLKAN+ N GPIRE L
Sbjct: 179 TDAKSVRQVLETLKTCGVNDGEICMIGNVCPETVEEAYGLVPSLKANRQTNEGPIREALT 238
Query: 727 NLANIKRS 750
L +K S
Sbjct: 239 TLVKLKSS 246
>gb|PAN07963.1| hypothetical protein PAHAL_A03212 [Panicum hallii]
gb|PAN07964.1| hypothetical protein PAHAL_A03212 [Panicum hallii]
gb|PAN07965.1| hypothetical protein PAHAL_A03212 [Panicum hallii]
gb|PAN07966.1| hypothetical protein PAHAL_A03212 [Panicum hallii]
Length = 221
Score = 165 bits (418), Expect = 4e-47
Identities = 96/220 (43%), Positives = 127/220 (57%), Gaps = 2/220 (0%)
Frame = +1
Query: 91 VVQLDSSDS--DAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXXXXFETPXX 264
VV LDSSDS D+EGFV+ S +GKA ++ +T
Sbjct: 18 VVVLDSSDSGSDSEGFVEELTPVHSKSNGKASSGSL-------------------KTGGK 58
Query: 265 XXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQ 444
++ V P ++ ELKLE+DIP ++++LM+CE A +LQ
Sbjct: 59 GSSFSKGEASHGKAYSGGKGGKGSSSNVVPTKSDAELKLELDIPPNSKMLMNCEAAELLQ 118
Query: 445 GIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMI 624
IHE + +LS+DP IK+P+SF KA +Y K N++ SV+Q LE LK+ GV DGEICMI
Sbjct: 119 EIHEHMAILSEDPKIKIPESFDKAFQYAKDGNHFRTASSVKQALEPLKKCGVNDGEICMI 178
Query: 625 GNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
N+ PET+EEVYAL+PSLKAN+ N GPI EVL LANIK
Sbjct: 179 ANIGPETVEEVYALVPSLKANRSVNEGPITEVLAALANIK 218
>ref|XP_021315826.1| DNA-directed RNA polymerases IV and V subunit 4-like isoform X2
[Sorghum bicolor]
ref|XP_021315827.1| DNA-directed RNA polymerases IV and V subunit 4-like isoform X2
[Sorghum bicolor]
gb|KXG30857.1| hypothetical protein SORBI_3004G256300 [Sorghum bicolor]
gb|KXG30858.1| hypothetical protein SORBI_3004G256300 [Sorghum bicolor]
gb|OQU85499.1| hypothetical protein SORBI_3004G256300 [Sorghum bicolor]
Length = 217
Score = 165 bits (417), Expect = 5e-47
Identities = 93/218 (42%), Positives = 124/218 (56%)
Frame = +1
Query: 91 VVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXXXXFETPXXXX 270
VV L SDSD+EGFV+ S +GKA ++ +T
Sbjct: 16 VVVLSDSDSDSEGFVEALTPVHSKSNGKASSASL-------------------KTGGKAS 56
Query: 271 XXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQGI 450
++ P ++ ELKLE+DIP ++R+LM+CE A +LQ I
Sbjct: 57 AFSKGEASNGKAYSSGKGGKGSSSHAVPTKSDAELKLELDIPPNSRILMNCEAAELLQEI 116
Query: 451 HESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMIGN 630
HE + +LS+DP IK+P+SF KA +Y K N++T SV+Q LE LK+ GV+DGEICMI N
Sbjct: 117 HEHMAILSEDPKIKIPESFDKAFQYAKDGNHFTTASSVKQALEPLKKCGVSDGEICMIAN 176
Query: 631 VCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
V PET+EEVYAL+PSLKAN+ G + EVL LANIK
Sbjct: 177 VGPETVEEVYALVPSLKANRSATEGSVTEVLAVLANIK 214
>gb|OEL38364.1| DNA-directed RNA polymerases IV and V subunit 4 [Dichanthelium
oligosanthes]
Length = 220
Score = 165 bits (417), Expect = 6e-47
Identities = 80/133 (60%), Positives = 102/133 (76%)
Frame = +1
Query: 346 VNPAVTEVELKLEMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEY 525
V P ++ ELKLE+DIP ++R+LM+CE A +LQ IHE + +LS+DP IK+P+SF KA +Y
Sbjct: 85 VVPTKSDAELKLELDIPPNSRMLMNCEGAELLQEIHEHMAILSEDPKIKIPESFDKAFQY 144
Query: 526 CKARNNYTDTESVRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGG 705
K N++T SV+Q LE LK+ GV DGEICMI N+ PET+EEVYAL+PSLKAN+ N G
Sbjct: 145 AKDGNHFTTASSVKQALEPLKKCGVNDGEICMIANIGPETVEEVYALVPSLKANRSLNEG 204
Query: 706 PIREVLVNLANIK 744
PI EVL LANIK
Sbjct: 205 PITEVLAALANIK 217
>ref|XP_004953742.1| DNA-directed RNA polymerases IV and V subunit 4 [Setaria italica]
ref|XP_004953743.1| DNA-directed RNA polymerases IV and V subunit 4 [Setaria italica]
ref|XP_004953744.1| DNA-directed RNA polymerases IV and V subunit 4 [Setaria italica]
gb|KQL31282.1| hypothetical protein SETIT_018302mg [Setaria italica]
gb|KQL31283.1| hypothetical protein SETIT_018302mg [Setaria italica]
gb|KQL31284.1| hypothetical protein SETIT_018302mg [Setaria italica]
gb|KQL31285.1| hypothetical protein SETIT_018302mg [Setaria italica]
Length = 221
Score = 164 bits (416), Expect = 8e-47
Identities = 96/220 (43%), Positives = 125/220 (56%), Gaps = 2/220 (0%)
Frame = +1
Query: 91 VVQLDSSDS--DAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXXXXFETPXX 264
VV L SDS D+EGFV+ S +GKA E++ +T
Sbjct: 18 VVVLSDSDSGSDSEGFVEELTPVHSKSNGKASSESL-------------------KTGGK 58
Query: 265 XXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQ 444
++ V P ++ ELKLE+DIP ++R+LM+CE A +LQ
Sbjct: 59 GSSFSKGEASQGKAYSGGKGGKGTSSNVVPTKSDAELKLELDIPPNSRMLMNCEAAELLQ 118
Query: 445 GIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMI 624
IHE + +LS+DP IK+P+SF KA +Y K N +T SV+Q LE LK+ GV DGEICMI
Sbjct: 119 EIHEHMAILSEDPKIKIPESFDKAFQYAKDGNQFTTASSVKQALEPLKKCGVNDGEICMI 178
Query: 625 GNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
N+ PETIEEVYAL+PSLKA + N GPI E+L LANIK
Sbjct: 179 ANIGPETIEEVYALVPSLKAKRTLNEGPITEILAALANIK 218
>ref|NP_001130236.1| uncharacterized protein LOC100191330 [Zea mays]
ref|XP_008676423.1| uncharacterized protein LOC100191330 isoform X1 [Zea mays]
ref|XP_008676424.1| uncharacterized protein LOC100191330 isoform X1 [Zea mays]
ref|XP_008676425.1| uncharacterized protein LOC100191330 isoform X1 [Zea mays]
gb|ACF78401.1| unknown [Zea mays]
gb|ACF80459.1| unknown [Zea mays]
gb|ACG32618.1| hypothetical protein [Zea mays]
gb|ACG33654.1| hypothetical protein [Zea mays]
gb|ACR38076.1| unknown [Zea mays]
Length = 219
Score = 162 bits (410), Expect = 6e-46
Identities = 92/228 (40%), Positives = 127/228 (55%)
Frame = +1
Query: 61 KDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXX 240
+ V + VV L SDSD+EGFV+ S +GKA ++
Sbjct: 8 RHKVSFAKPRVVVLSDSDSDSEGFVEELTPVHSKSNGKASSASL---------------- 51
Query: 241 XXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMD 420
+T ++ P ++ ELKLE+DIP ++R+LM+
Sbjct: 52 ---KTGGKASALSKGEASKGKAYSSDKGGKGSSSHAVPTKSDAELKLELDIPPNSRMLMN 108
Query: 421 CEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGV 600
CE A +LQ IHE + +LS+DP IK+P+SF KA +Y K N++T SV+Q +E LK+ GV
Sbjct: 109 CEAAELLQEIHEHMAILSEDPKIKIPESFDKAFQYSKDGNHFTTASSVKQAIEPLKKCGV 168
Query: 601 TDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
+DGEICMI N+ PET+EEVYAL+PSLKAN+ G + EVL LANIK
Sbjct: 169 SDGEICMIANIGPETVEEVYALVPSLKANRSAIEGSVTEVLTALANIK 216
>ref|XP_015688968.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Oryza brachyantha]
Length = 227
Score = 159 bits (401), Expect = 2e-44
Identities = 88/217 (40%), Positives = 124/217 (57%)
Frame = +1
Query: 94 VQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXXXXFETPXXXXX 273
V +D SDSD+EGFV+ +GKA E++
Sbjct: 38 VTIDDSDSDSEGFVEELPRFNPKSNGKAASESLKTGGKASSKEAGKGGKGS--------- 88
Query: 274 XXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQGIH 453
A+ A ++ LKLE+D+P ++ +LM+CEVA +LQ IH
Sbjct: 89 ---------------------ASTAASAKSDAALKLELDMPPNSCILMNCEVAELLQEIH 127
Query: 454 ESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMIGNV 633
E + +LS+DP IK+P+SF KA +Y K N+++ +SV+QVL+ L++YGV+DGEIC+I N+
Sbjct: 128 EHMAILSEDPKIKIPESFDKAFKYAKEGNHFSTAQSVKQVLDPLRKYGVSDGEICLIANI 187
Query: 634 CPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
PETIEEVYAL+PSLKA + N GPI + L LANIK
Sbjct: 188 GPETIEEVYALVPSLKATRSLNEGPIMKALTALANIK 224
>ref|XP_006647817.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Oryza brachyantha]
Length = 228
Score = 159 bits (401), Expect = 2e-44
Identities = 88/217 (40%), Positives = 124/217 (57%)
Frame = +1
Query: 94 VQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXXXXFETPXXXXX 273
V +D SDSD+EGFV+ +GKA E++
Sbjct: 38 VTIDDSDSDSEGFVEELPRFNPKSNGKAASESLKTGGKASSKGEAGKGGKG--------- 88
Query: 274 XXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQGIH 453
A+ A ++ LKLE+D+P ++ +LM+CEVA +LQ IH
Sbjct: 89 --------------------SASTAASAKSDAALKLELDMPPNSCILMNCEVAELLQEIH 128
Query: 454 ESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMIGNV 633
E + +LS+DP IK+P+SF KA +Y K N+++ +SV+QVL+ L++YGV+DGEIC+I N+
Sbjct: 129 EHMAILSEDPKIKIPESFDKAFKYAKEGNHFSTAQSVKQVLDPLRKYGVSDGEICLIANI 188
Query: 634 CPETIEEVYALIPSLKANKHKNGGPIREVLVNLANIK 744
PETIEEVYAL+PSLKA + N GPI + L LANIK
Sbjct: 189 GPETIEEVYALVPSLKATRSLNEGPIMKALTALANIK 225
>ref|XP_010236010.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X2 [Brachypodium distachyon]
Length = 238
Score = 156 bits (395), Expect = 2e-43
Identities = 89/241 (36%), Positives = 129/241 (53%)
Frame = +1
Query: 22 PRRSQIQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXX 201
PR + S + + +A + L SDSD+EGF + + S +GKA +++
Sbjct: 13 PRGKALASKTGTPNGRQNISANAPIVLSDSDSDSEGFREEPTPTHSKSNGKASSDSLKTG 72
Query: 202 XXXXXXXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKL 381
A+ PA ++ ELKL
Sbjct: 73 GKASSFSNGEAGKGG------------------KTFSAGKGGKGSASTAMPAKSDAELKL 114
Query: 382 EMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTES 561
E+D+P ++R+LM+CE +LQ IHE + +LS+DP IK+P+SF + ++ K N++T +S
Sbjct: 115 ELDMPSNSRILMNCEATELLQQIHEHMAILSEDPKIKIPESFDRTFQFAKEGNHFTSAKS 174
Query: 562 VRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANI 741
V++VL+ LK+ GVTDGEICMI N+ PETIEEVYAL+PSLKA + N I E L LANI
Sbjct: 175 VKEVLDPLKKSGVTDGEICMIANIGPETIEEVYALVPSLKATRSLNEDLITEALTALANI 234
Query: 742 K 744
K
Sbjct: 235 K 235
>ref|XP_010236009.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform
X1 [Brachypodium distachyon]
gb|KQK01532.1| hypothetical protein BRADI_3g56497v3 [Brachypodium distachyon]
Length = 249
Score = 156 bits (395), Expect = 3e-43
Identities = 89/241 (36%), Positives = 130/241 (53%)
Frame = +1
Query: 22 PRRSQIQSASLKKKDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXX 201
PR + S + + +A + L SDSD+EGF + + S +GKA +++
Sbjct: 13 PRGKALASKTGTPNGRQNISANAPIVLSDSDSDSEGFREEPTPTHSKSNGKASSDSLKTG 72
Query: 202 XXXXXXXXXXXXXXXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKL 381
+ A+ PA ++ ELKL
Sbjct: 73 GKASSDSLKTGGKASSFSNGEAGKGGKTFSAGKGGKGS-------ASTAMPAKSDAELKL 125
Query: 382 EMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTES 561
E+D+P ++R+LM+CE +LQ IHE + +LS+DP IK+P+SF + ++ K N++T +S
Sbjct: 126 ELDMPSNSRILMNCEATELLQQIHEHMAILSEDPKIKIPESFDRTFQFAKEGNHFTSAKS 185
Query: 562 VRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHKNGGPIREVLVNLANI 741
V++VL+ LK+ GVTDGEICMI N+ PETIEEVYAL+PSLKA + N I E L LANI
Sbjct: 186 VKEVLDPLKKSGVTDGEICMIANIGPETIEEVYALVPSLKATRSLNEDLITEALTALANI 245
Query: 742 K 744
K
Sbjct: 246 K 246
>ref|XP_015627434.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X2
[Oryza sativa Japonica Group]
gb|EEC73910.1| hypothetical protein OsI_08747 [Oryza sativa Indica Group]
gb|EEE57712.1| hypothetical protein OsJ_08195 [Oryza sativa Japonica Group]
Length = 231
Score = 155 bits (393), Expect = 3e-43
Identities = 75/136 (55%), Positives = 104/136 (76%)
Frame = +1
Query: 337 ATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKA 516
A+A A ++ ELKLE+D+P ++ +LM+CEVA +LQ IHE + +LS+DP IK+P+SF KA
Sbjct: 93 ASARVSAKSDAELKLELDMPPNSCILMNCEVAELLQEIHEHMAILSEDPKIKIPESFDKA 152
Query: 517 LEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHK 696
+Y K N ++ +SV+QVL+ L++YGV+DGE+C+I NV PETIEEVYAL+PSLKA +
Sbjct: 153 FQYVKEGNQFSTAQSVKQVLDPLRKYGVSDGEMCLIANVGPETIEEVYALVPSLKATRSL 212
Query: 697 NGGPIREVLVNLANIK 744
N PI E L LA+IK
Sbjct: 213 NESPIMEALTALADIK 228
>gb|AQK54962.1| DNA-directed RNA polymerases IV and V subunit 4 [Zea mays]
gb|AQK54964.1| DNA-directed RNA polymerases IV and V subunit 4 [Zea mays]
Length = 226
Score = 155 bits (392), Expect = 4e-43
Identities = 92/235 (39%), Positives = 127/235 (54%), Gaps = 7/235 (2%)
Frame = +1
Query: 61 KDNVPMEEDAVVQLDSSDSDAEGFVDTANGSFSLGSGKAPKETVXXXXXXXXXXXXXXXX 240
+ V + VV L SDSD+EGFV+ S +GKA ++
Sbjct: 8 RHKVSFAKPRVVVLSDSDSDSEGFVEELTPVHSKSNGKASSASL---------------- 51
Query: 241 XXFETPXXXXXXXXXXXXXXXXXXXXXXXLPRATAVNPAVTEVELKLEMDIPKDARVLMD 420
+T ++ P ++ ELKLE+DIP ++R+LM+
Sbjct: 52 ---KTGGKASALSKGEASKGKAYSSDKGGKGSSSHAVPTKSDAELKLELDIPPNSRMLMN 108
Query: 421 CEVATILQGIHESLTVLSDDPNIKMPDSFTKALEYCKARNNYTDTESVRQVLETLKEYGV 600
CE A +LQ IHE + +LS+DP IK+P+SF KA +Y K N++T SV+Q +E LK+ GV
Sbjct: 109 CEAAELLQEIHEHMAILSEDPKIKIPESFDKAFQYSKDGNHFTTASSVKQAIEPLKKCGV 168
Query: 601 TDGEICMIGNVCPETIEEVYALIPSLK-------ANKHKNGGPIREVLVNLANIK 744
+DGEICMI N+ PET+EEVYAL+PSLK AN+ G + EVL LANIK
Sbjct: 169 SDGEICMIANIGPETVEEVYALVPSLKDKNLLVQANRSAIEGSVTEVLTALANIK 223
>ref|XP_015627433.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
[Oryza sativa Japonica Group]
dbj|BAH01271.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAS80672.1| Os02g0723300 [Oryza sativa Japonica Group]
Length = 239
Score = 155 bits (393), Expect = 4e-43
Identities = 75/136 (55%), Positives = 104/136 (76%)
Frame = +1
Query: 337 ATAVNPAVTEVELKLEMDIPKDARVLMDCEVATILQGIHESLTVLSDDPNIKMPDSFTKA 516
A+A A ++ ELKLE+D+P ++ +LM+CEVA +LQ IHE + +LS+DP IK+P+SF KA
Sbjct: 101 ASARVSAKSDAELKLELDMPPNSCILMNCEVAELLQEIHEHMAILSEDPKIKIPESFDKA 160
Query: 517 LEYCKARNNYTDTESVRQVLETLKEYGVTDGEICMIGNVCPETIEEVYALIPSLKANKHK 696
+Y K N ++ +SV+QVL+ L++YGV+DGE+C+I NV PETIEEVYAL+PSLKA +
Sbjct: 161 FQYVKEGNQFSTAQSVKQVLDPLRKYGVSDGEMCLIANVGPETIEEVYALVPSLKATRSL 220
Query: 697 NGGPIREVLVNLANIK 744
N PI E L LA+IK
Sbjct: 221 NESPIMEALTALADIK 236