BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00007724
         (4099 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [A...  2289   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...  2059   0.0  
ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III s...  2029   0.0  
ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 is...  1996   0.0  
ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 is...  1994   0.0  
ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 is...  1991   0.0  
gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas...  1939   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1934   0.0  
ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III s...  1931   0.0  
ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 is...  1896   0.0  
gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...  1894   0.0  
ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [S...  1891   0.0  
ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Z...  1880   0.0  
ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [S...  1873   0.0  
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1870   0.0  
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital...  1869   0.0  
gb|ONM16376.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]  1868   0.0  
gb|ONM16381.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]  1867   0.0  
gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]    1865   0.0  
ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 is...  1860   0.0  

>ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [Asparagus officinalis]
 gb|ONK61062.1| uncharacterized protein A4U43_C08F25870 [Asparagus officinalis]
          Length = 1381

 Score = 2290 bits (5933), Expect = 0.0
 Identities = 1162/1378 (84%), Positives = 1238/1378 (89%), Gaps = 14/1378 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            M+  AEKLRCTKEPYIEDVGPR+IKSI FDAFSG++++K AEVQVW++ LYD +A KPV 
Sbjct: 1    MSRRAEKLRCTKEPYIEDVGPRRIKSICFDAFSGDEVKKAAEVQVWSDRLYDLSA-KPVE 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMGP NKK VC TC+GGF DCPGHFGYL+LTLPVFNVGYFNSILNILKCICK C
Sbjct: 60   NGLVDPRMGPPNKKVVCATCNGGFADCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPR----CGHINGNVSK 533
            GRILL + ER+EFL K RNP+ADVHQKN IMK VR+KCKS  + PR    CGH NG ++K
Sbjct: 120  GRILLEDAERREFLMKVRNPKADVHQKNMIMKKVRDKCKSTLQSPRSCASCGHKNGVLAK 179

Query: 534  AKS-QLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCE 710
             KS QL++ E     VD+SLE   AALSHLKEK S+Q +H LTP  V  LFKKMPDEDCE
Sbjct: 180  GKSFQLSIIEKLEV-VDKSLE---AALSHLKEKPSYQHLHFLTPFDVFCLFKKMPDEDCE 235

Query: 711  LLHLGVRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGA 890
            LL+L VRPENLIVTE+AIPPAPIRPSVIV SGQSNEDGLTA             E ++GA
Sbjct: 236  LLNLCVRPENLIVTEVAIPPAPIRPSVIVNSGQSNEDGLTAILKEVIQRNSRLREGIEGA 295

Query: 891  A-PLYNCLE-CWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEF 1064
            + P++NC++  W+ LQ  VV+YINSEAPSV ESKHRGL+QRLKGKQGRFRCNLSGKRVEF
Sbjct: 296  SVPMHNCMDRWWSELQDVVVKYINSEAPSVIESKHRGLIQRLKGKQGRFRCNLSGKRVEF 355

Query: 1065 TGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVIL 1244
            TGRTVISPDPNLKITEVAIPILMA+VLTYPERVT HNIEKLRQCVRNGPFKHPGANFV L
Sbjct: 356  TGRTVISPDPNLKITEVAIPILMARVLTYPERVTQHNIEKLRQCVRNGPFKHPGANFVTL 415

Query: 1245 PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 1424
            PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 416  PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 475

Query: 1425 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQD 1604
            TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAF LMGVQNNLCTPKNGEILVASTQD
Sbjct: 476  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFTLMGVQNNLCTPKNGEILVASTQD 535

Query: 1605 FLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRP 1784
            FLTSSFLITRKDTFYDRAAFSLMCSYIGDGME IDLP PALIKPIELWTGKQLFSV+VRP
Sbjct: 536  FLTSSFLITRKDTFYDRAAFSLMCSYIGDGMEVIDLPPPALIKPIELWTGKQLFSVIVRP 595

Query: 1785 NAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVL 1964
            NAQTRVFVN +VKERIHVKDTETMCP DGYVYFRNS+LICGQLGKVTLGNGNK+GLFSVL
Sbjct: 596  NAQTRVFVNFVVKERIHVKDTETMCPHDGYVYFRNSDLICGQLGKVTLGNGNKNGLFSVL 655

Query: 1965 LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSF 2144
            LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGY RC SF
Sbjct: 656  LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYGRCISF 715

Query: 2145 IDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 2324
            I+LYENRKL L+PGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG
Sbjct: 716  IELYENRKLKLRPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 775

Query: 2325 SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEF 2504
            SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSK PAAKGFVANSFYTGLTATEF
Sbjct: 776  SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKTPAAKGFVANSFYTGLTATEF 835

Query: 2505 FFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGM 2684
            FFHTMGGREGLVDTAVKTAETGYMSRRLMK+LEDLSLYYDQTVRS++GG+VQFIYGDDGM
Sbjct: 836  FFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSLYYDQTVRSSNGGVVQFIYGDDGM 895

Query: 2685 DPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSS 2864
            DPAKMEGENG PLNLDQLYKKV+ATCP +PQDSLSPS+I+ L+NERLSKYDM+PE GCSS
Sbjct: 896  DPAKMEGENGTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSS 955

Query: 2865 AFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGISAKQLQVFMETC 3044
            AFKNLL DFLHK VAELRKTR RL+LQED  KE S  LENVAANISGISA+QL+VFMETC
Sbjct: 956  AFKNLLLDFLHKHVAELRKTRIRLQLQED-HKETSSVLENVAANISGISAQQLKVFMETC 1014

Query: 3045 ISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK 3224
            ISRYHKKKLE              EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK
Sbjct: 1015 ISRYHKKKLEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK 1074

Query: 3225 NISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLK 3404
            NISTPIITATLFCDD+EESARLVK EIE+T+L EVAEAVK V KSN PYISI+ DKER+K
Sbjct: 1075 NISTPIITATLFCDDKEESARLVKSEIERTLLGEVAEAVKTVLKSNHPYISIVLDKERIK 1134

Query: 3405 TLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFP-------PVSDRNRLHF 3563
            TLHMEDS +SIKN+I +H++   +KLK E IT  G GNLRIFP          D +RL+ 
Sbjct: 1135 TLHMEDSLDSIKNSIVNHRN---LKLKAEDITFHGKGNLRIFPRGRNAKGDNKDGSRLNS 1191

Query: 3564 ELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHV 3743
            EL+SL S+LPKVIVKGISTVDRAVINCQ+ KYNLLVEGTNLLAVMGTPGVDASKTKSNH+
Sbjct: 1192 ELHSLTSILPKVIVKGISTVDRAVINCQRGKYNLLVEGTNLLAVMGTPGVDASKTKSNHI 1251

Query: 3744 MEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM 3923
            MEIWQTLGIEAAR  IISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM
Sbjct: 1252 MEIWQTLGIEAARQSIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM 1311

Query: 3924 KDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            KDS+LMLASFEKTSEHLFNASFN RDDQIEGVSECIIMGIPMQLGTGILKVRQR+EQL
Sbjct: 1312 KDSVLMLASFEKTSEHLFNASFNHRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEQL 1369


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Elaeis
            guineensis]
          Length = 1369

 Score = 2059 bits (5335), Expect = 0.0
 Identities = 1028/1361 (75%), Positives = 1169/1361 (85%), Gaps = 2/1361 (0%)
 Frame = +3

Query: 21   EKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 200
            EKLRCTKEPYIEDVGPRKIKSIRF  FSGE+IRK+AEVQVWNN +YD   +KP+ +GL+D
Sbjct: 3    EKLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLN-LKPIENGLLD 61

Query: 201  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 380
             RMG  N++T C TCHG FTDCPGHFGYL+LTLPVFNVGYFNSILNILKCICK CGRILL
Sbjct: 62   PRMGAPNRQTECATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRILL 121

Query: 381  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 560
             E  RK +L K RNP+AD+ QKN +MK VR+KCK  SRC RCG+ NG V KA+S L   +
Sbjct: 122  DETLRKSYLKKMRNPKADIFQKNALMKMVRDKCKP-SRCLRCGYANGVVKKARSGLYFIQ 180

Query: 561  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 740
            +F  T D S+EE R+ALSH K+K SFQ  H+L+   VL+LF+KM DEDCELL+L  RPE 
Sbjct: 181  DFSKTADPSVEEFRSALSHTKDKTSFQVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPEK 240

Query: 741  LIVTEIAIPPAPIRPSVIVGSGQS-NEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLEC 917
            LIVT IA+PP  IRPSVIV SG+S NED +T+             EDL+GAAP + CL+C
Sbjct: 241  LIVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILREDLEGAAPPFKCLDC 300

Query: 918  WNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPN 1097
            W  LQ  VVEYINSEAP +P+SKHRGLVQRLKGKQGRFR NLSGKRVEFTGRTVISPDPN
Sbjct: 301  WTHLQIQVVEYINSEAPCIPDSKHRGLVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPN 360

Query: 1098 LKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYV 1277
            LKITEVAIPILMA+VLTYPERV+++NIEKLRQ VRNGP K+PGANFV+ PDG+++HL+YV
Sbjct: 361  LKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSKYPGANFVLRPDGSKVHLRYV 420

Query: 1278 EKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNP 1457
            +K+++ANELKYG VVERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNP
Sbjct: 421  DKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNP 480

Query: 1458 YNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 1637
            YNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK
Sbjct: 481  YNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 540

Query: 1638 DTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLI 1817
            DTFYDRAAFSLMCSY+GD M+ IDLPTPA+IKPIELWTGKQLF+VL+RPNA TRVF+NLI
Sbjct: 541  DTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGKQLFNVLIRPNANTRVFLNLI 600

Query: 1818 VKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVAAS 1997
            VKE+I+ K +ETMCP DG VYFRNSELICGQLGK TLGNGNK GLF+VLLRDYN   AAS
Sbjct: 601  VKEKIYSK-SETMCPNDGCVYFRNSELICGQLGKATLGNGNKDGLFAVLLRDYNPHAAAS 659

Query: 1998 CMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTL 2177
            CMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQK+  I++GYR C   I  Y   +L L
Sbjct: 660  CMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHGHISSYSKGELIL 719

Query: 2178 KPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIAC 2357
            +PG NAA+TLE++IT VLN+IR TAG+VCM ELHWRNSPLIMSQCGSKGS INISQM+AC
Sbjct: 720  QPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGSPINISQMVAC 779

Query: 2358 VGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGL 2537
            VGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLT TEFFFHTMGGREGL
Sbjct: 780  VGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTEFFFHTMGGREGL 839

Query: 2538 VDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGI 2717
            VDTAVKTAETGYMSRRLMK LEDLS+YYDQTVR+ASG IVQF+YGDDGMDPAKMEG++GI
Sbjct: 840  VDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDGMDPAKMEGKDGI 899

Query: 2718 PLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLH 2897
            PLNLDQL+ K++ATCP + QD+LSP++I+ ++++RLSKYDM+PE GCS++FK +LSDFLH
Sbjct: 900  PLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYDMTPEGGCSASFKKMLSDFLH 959

Query: 2898 KRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGISAKQLQVFMETCISRYHKKKLE 3074
            KRVA L   R  L+L E+  QK+D   LE+VAANISGISAKQLQVF+ETCISRYH KK+E
Sbjct: 960  KRVAALCNIRRALQLDENHLQKQDYSVLESVAANISGISAKQLQVFLETCISRYHLKKIE 1019

Query: 3075 XXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 3254
                          EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT
Sbjct: 1020 AGGAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 1079

Query: 3255 LFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFES 3434
            L  D    SAR+V+  ++KTVL EVA+A+KIV KS+QPYI +  D ER++ LHM  S +S
Sbjct: 1080 LVSDRDVLSARMVRSSLQKTVLGEVAKAIKIVLKSSQPYIVVKLDMERIEALHMRISSQS 1139

Query: 3435 IKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGI 3614
            ++ AI +H    K KLK EHI + G   L+I+PP +DR++L FEL+SLK++LPKVIVKGI
Sbjct: 1140 VQQAILNH---PKTKLKPEHIRVLGNNKLKIYPPEADRSKLQFELHSLKAVLPKVIVKGI 1196

Query: 3615 STVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCII 3794
            +TV+RAVIN     YNLLVEGTNLLAVMGTPG+D SKTKSNH++E+ QT+GIEAAR CII
Sbjct: 1197 ATVERAVINHANGVYNLLVEGTNLLAVMGTPGIDGSKTKSNHIIEVQQTIGIEAARQCII 1256

Query: 3795 SEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHL 3974
            +EIQ TM++HGMSIDARHMMLLAD+MTY+GEVLGITRFG++KMKDS+LMLASFEKT+EHL
Sbjct: 1257 NEIQYTMRNHGMSIDARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFEKTAEHL 1316

Query: 3975 FNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            FNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR+EQL
Sbjct: 1317 FNASYSGRNDQIEGVSECIIMGIPMQLGTGILKVRQRVEQL 1357


>ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
 ref|XP_018682187.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
          Length = 1372

 Score = 2029 bits (5257), Expect = 0.0
 Identities = 1015/1361 (74%), Positives = 1159/1361 (85%), Gaps = 2/1361 (0%)
 Frame = +3

Query: 21   EKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 200
            EKLRCTKEPYIEDVGP++IKSIRF  FSGE+I+K+AEVQVWNN +Y    ++PV +GL+D
Sbjct: 6    EKLRCTKEPYIEDVGPQRIKSIRFSTFSGEEIKKLAEVQVWNNRIYGID-LRPVENGLLD 64

Query: 201  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 380
             +MG ANK  VC TCHG FT+CPGHFGYL+LTLPVFNVG+FNSILN+LKCICKAC RILL
Sbjct: 65   PKMGAANKAGVCATCHGNFTECPGHFGYLKLTLPVFNVGFFNSILNVLKCICKACARILL 124

Query: 381  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 560
             E +R+ FL K RNP+AD+  KN +MK +R+KCK  S CP CG  NG V KA+S  A+A 
Sbjct: 125  LENDRRIFLKKMRNPKADIFMKNALMKKIRDKCK-ISICPWCGSRNGVVKKARSSFAIAH 183

Query: 561  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 740
            +F  +VDES+E  RAALSH+K K SFQ VH+L+P  VL+LFK+M DEDCELL+L  RP+ 
Sbjct: 184  DFSRSVDESIEVVRAALSHIKAKSSFQIVHVLSPVTVLSLFKRMVDEDCELLNLYDRPDK 243

Query: 741  LIVTEIAIPPAPIRPSVIVGSGQS-NEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLEC 917
            LIVT IA+PP  +RPSV V  G+S NED +T              EDL+GAAP + CL+C
Sbjct: 244  LIVTTIAVPPVAVRPSVFVDFGKSSNEDSITTILKNIINTNSILREDLEGAAPPFKCLDC 303

Query: 918  WNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPN 1097
            W  LQ  VVEYINSEAPSVP+SKHRGL+QRLKGKQGRFR NLSGKRVEFTGRTVISPDPN
Sbjct: 304  WAHLQIQVVEYINSEAPSVPDSKHRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPN 363

Query: 1098 LKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYV 1277
            LKITEVAIP+LMA+ LTYPERV+ +NIEKLRQ + NGP K+PGANF++L DGT+ HL+YV
Sbjct: 364  LKITEVAIPVLMAKKLTYPERVSAYNIEKLRQRICNGPDKYPGANFILLGDGTKQHLRYV 423

Query: 1278 EKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNP 1457
            +KK  A+ELKYG +VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNP
Sbjct: 424  DKKTAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNP 483

Query: 1458 YNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 1637
            YNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK
Sbjct: 484  YNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 543

Query: 1638 DTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLI 1817
            DTFYDRAAFSLMCSY+GD M+ IDLP+PA+IKPIELWTGKQLFSVL+RPNA+T+VF+NL+
Sbjct: 544  DTFYDRAAFSLMCSYMGDSMDPIDLPSPAIIKPIELWTGKQLFSVLIRPNARTKVFLNLM 603

Query: 1818 VKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVAAS 1997
            VKE+I+ K +ETMCP DGYVYFRNSELICGQLGKVTLGNGNK GLFSVLLRDYNS  AAS
Sbjct: 604  VKEKIYTK-SETMCPSDGYVYFRNSELICGQLGKVTLGNGNKDGLFSVLLRDYNSHAAAS 662

Query: 1998 CMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTL 2177
            CMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I LY   KLTL
Sbjct: 663  CMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKIDEGYRECHELISLYGKGKLTL 722

Query: 2178 KPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIAC 2357
            +PG NAA+TLE++IT VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS INISQM++C
Sbjct: 723  QPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSPLIMSQCGSKGSPINISQMVSC 782

Query: 2358 VGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGL 2537
            VGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGL
Sbjct: 783  VGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 842

Query: 2538 VDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGI 2717
            VDTAVKTAETGYMSRRLMK LEDLS+YYD+TVR+ASGGIVQF+YGDDGMDPAKMEG++GI
Sbjct: 843  VDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMDPAKMEGKDGI 902

Query: 2718 PLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLH 2897
            PLN+DQL+ KV+ATCP +  D LSP++ + ++++RL+KYDMSPE GCS+AFK LLSDF+H
Sbjct: 903  PLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFKKLLSDFVH 962

Query: 2898 KRVAELRKTRTRLKLQE-DGQKEDSGTLENVAANISGISAKQLQVFMETCISRYHKKKLE 3074
            KRV+ L   R  LKL E D  ++DS  LENVAA ISGIS+KQL+VF+ETCISRYH KK+E
Sbjct: 963  KRVSALANMRKSLKLDETDMGRKDSTVLENVAAKISGISSKQLEVFLETCISRYHSKKVE 1022

Query: 3075 XXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 3254
                          EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KNISTPI+TAT
Sbjct: 1023 AGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKNISTPIVTAT 1082

Query: 3255 LFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFES 3434
            L       SAR+VK  IEKTVL EVA+A+KIV KS++PYI +  D + ++ LHM  S ES
Sbjct: 1083 LLNGRDVLSARVVKSCIEKTVLGEVAKALKIVLKSSRPYIVVKLDMDLIEALHMRVSAES 1142

Query: 3435 IKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGI 3614
            + ++I +H    KIKLK EHI   G   L+I+PP +DR +L FE++SLK+MLPKVIVKGI
Sbjct: 1143 VCHSILNH---PKIKLKSEHINNIGSDKLKIYPPEADRRKLQFEMHSLKAMLPKVIVKGI 1199

Query: 3615 STVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCII 3794
             TV+RAVIN     YNLLVEGTNLLAVMGTPG+DASKT+SNHV+E+ +TLGIEAAR CII
Sbjct: 1200 PTVERAVINETNGVYNLLVEGTNLLAVMGTPGIDASKTRSNHVIEVQRTLGIEAARQCII 1259

Query: 3795 SEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHL 3974
            +EIQ TM+ HGMSID RHMMLLAD+MTYKGEVLGITRFG++KMK+S+LMLASFEKT+EHL
Sbjct: 1260 NEIQYTMRGHGMSIDTRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHL 1319

Query: 3975 FNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            FNAS+ GRDDQIEGVSECIIMGIPMQLGTGILKVRQR+E+L
Sbjct: 1320 FNASYGGRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEKL 1360


>ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Ananas comosus]
          Length = 1377

 Score = 1996 bits (5171), Expect = 0.0
 Identities = 1004/1367 (73%), Positives = 1147/1367 (83%), Gaps = 3/1367 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEPYIEDVG RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            LITRKDTFYDRA FSLMCSY+GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSYMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1803 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 1982
            F+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 1983 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2162
              AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2163 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2342
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2343 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2522
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2523 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2702
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2703 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2882
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2883 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3059
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3060 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3239
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3240 IITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3419
            IITA L  D    SA +VKG IEKTVL EVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3420 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3599
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3600 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3776
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3777 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 3956
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 3957 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQI 1361


>ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 isoform X2 [Ananas comosus]
          Length = 1377

 Score = 1994 bits (5167), Expect = 0.0
 Identities = 1003/1367 (73%), Positives = 1147/1367 (83%), Gaps = 3/1367 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEPYIEDVG RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            LITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1803 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 1982
            F+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 1983 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2162
              AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2163 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2342
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2343 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2522
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2523 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2702
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2703 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2882
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2883 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3059
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3060 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3239
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3240 IITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3419
            IITA L  D    SA +VKG IEKTVL EVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3420 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3599
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3600 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3776
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3777 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 3956
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 3957 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQI 1361


>ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 isoform X3 [Ananas comosus]
          Length = 1377

 Score = 1991 bits (5159), Expect = 0.0
 Identities = 1002/1367 (73%), Positives = 1146/1367 (83%), Gaps = 3/1367 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEPYIEDVG RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            LITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1803 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 1982
            F+NL VKE+I+  + ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLTVKEKIYTAN-ETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 1983 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2162
              AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2163 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2342
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2343 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2522
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2523 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2702
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2703 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2882
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2883 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3059
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3060 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3239
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3240 IITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3419
            IITA L  D    SA +VKG IEKTVL EVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3420 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3599
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3600 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3776
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3777 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 3956
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 3957 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQI 1361


>gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas comosus]
          Length = 1412

 Score = 1939 bits (5022), Expect = 0.0
 Identities = 985/1374 (71%), Positives = 1124/1374 (81%), Gaps = 10/1374 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEPYIEDVG RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+ IL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSFILDILKCICKTC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHIN-------GN 524
             RILLPE++R+EFL K RNPR D  QKN +MK +R+KCK F RCPRCG  N       G 
Sbjct: 120  SRILLPEEDRREFLRKMRNPRTDALQKNALMKKIRDKCKMF-RCPRCGSSNVYIIGNTGV 178

Query: 525  VSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDED 704
            V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DED
Sbjct: 179  VKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDED 238

Query: 705  CELLHLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDL 881
            CELL L  RPE LIVTEIA+PPAPIRPS  VG G+ SNED +T+             EDL
Sbjct: 239  CELLDLYDRPEKLIVTEIAVPPAPIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDL 298

Query: 882  DGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVE 1061
            +G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE
Sbjct: 299  EGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVE 358

Query: 1062 FTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVI 1241
            +TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV 
Sbjct: 359  YTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQ 418

Query: 1242 LPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 1421
             PDG+  HLKYV KK VAN+LKYG +VERHLEDGDI                  ARIMPW
Sbjct: 419  KPDGSTTHLKYVNKKIVANDLKYGDIVERHLEDGDI------------------ARIMPW 460

Query: 1422 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQ 1601
            RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQ
Sbjct: 461  RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 520

Query: 1602 DFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVR 1781
            DFLTSSFLITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVR
Sbjct: 521  DFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVR 580

Query: 1782 PNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSV 1961
            PNA TRVF+NL VKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSV
Sbjct: 581  PNACTRVFLNLTVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSV 639

Query: 1962 LLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSS 2141
            LLRDYNS  AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C  
Sbjct: 640  LLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKRKIDEGYRECHE 699

Query: 2142 FIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSK 2321
             I  Y   +L  +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSK
Sbjct: 700  HISSYSKGQLACEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSK 759

Query: 2322 GSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATE 2501
            GSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATE
Sbjct: 760  GSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATE 819

Query: 2502 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDG 2681
            FFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDG
Sbjct: 820  FFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDG 879

Query: 2682 MDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCS 2861
            MDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS
Sbjct: 880  MDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCS 939

Query: 2862 SAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFME 3038
            +AFK LL+DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++
Sbjct: 940  AAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLD 999

Query: 3039 TCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA 3218
            TCISRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA
Sbjct: 1000 TCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINA 1059

Query: 3219 AKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKER 3398
            AKNI TPIITA L  D    SA +VKG IEKTVL EVA+A++IV KS++PYIS+  D   
Sbjct: 1060 AKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGL 1119

Query: 3399 LKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSL 3578
            +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SL
Sbjct: 1120 IKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSL 1176

Query: 3579 KSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIW 3755
            K+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ 
Sbjct: 1177 KAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVH 1236

Query: 3756 QTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSI 3935
            +TLG+EAAR  I+ EI DTM++HGMSID RHMMLLAD+MTYKGEVLGITRFG+ KMK S+
Sbjct: 1237 ETLGVEAARQSIVDEIHDTMRNHGMSIDKRHMMLLADLMTYKGEVLGITRFGIAKMKTSV 1296

Query: 3936 LMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            LMLASFEKT+EHLFNAS++GR+D+I GVSECIIMGIPM+LGTG LKV+QR+EQ+
Sbjct: 1297 LMLASFEKTAEHLFNASYSGREDKIHGVSECIIMGIPMRLGTGFLKVKQRLEQI 1350


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza
            brachyantha]
          Length = 1389

 Score = 1934 bits (5009), Expect = 0.0
 Identities = 963/1382 (69%), Positives = 1126/1382 (81%), Gaps = 18/1382 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IED G R+IKSIRF  FSG ++R+ AEVQVWN+ +Y+   ++PV 
Sbjct: 1    MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQE-MRPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D+RMG ANK   C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK C
Sbjct: 60   NGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R EFL K RNP+AD  QK+ IMK VR+KCK  SRCP CG ING   K ++ 
Sbjct: 120  SRVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L +  +   T+D S EE + ALSH KEK+SF  VH+L P+ VL+LFK+M DEDCELL+LG
Sbjct: 179  LIILHDCSKTLDGSTEELKEALSHKKEKLSFSAVHMLDPATVLSLFKRMTDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV V  G+ SNED +T              E+L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFM 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP KHPGANF+I  DGT+L
Sbjct: 359  SPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQTDGTKL 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
            HLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  HLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKD FYDR++F+L+CSY+GD ME+IDLPTPAL+KPIELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNACTKV 598

Query: 1803 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 1982
            F+NL VKE+I+ K  ETMCP DG+VYFRNSEL+ GQ+GK TLGNGNK G+FS+L+RDYNS
Sbjct: 599  FLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILVRDYNS 658

Query: 1983 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2162
              AASCMNRLAK SAR+IGNHGFSIG+DDV+PGE L+QQKK  ID+GY+ C   I  +  
Sbjct: 659  HAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLITSFSK 718

Query: 2163 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2342
              LTL+PG NAA+TLE +IT VLN+IR+ AG++CM  LHWRNSPLIMSQCGSKGS INIS
Sbjct: 719  GALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGSPINIS 778

Query: 2343 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLT---------- 2492
            QM+ CVGQQSVGG RAPNGFIDRTLPHFPI SK PAAKGFVANSFY GLT          
Sbjct: 779  QMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFFFHTMG 838

Query: 2493 -------ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGG 2651
                   ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGG
Sbjct: 839  GIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGG 898

Query: 2652 IVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSK 2831
            IVQF+YGDDGMDPAKMEGE+G PLNLDQL+ KV+ATCP++ Q++LSP +I+ ++N++LS+
Sbjct: 899  IVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSE 958

Query: 2832 YDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGIS 3011
            +D S +DGCS  FK LL DFL  R+  L+ TR  L L E+   +DS   E++AANISGIS
Sbjct: 959  HDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIEESIAANISGIS 1018

Query: 3012 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3191
            AKQLQVF++TC+SRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3192 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPY 3371
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VL EVAE +KIV KS+QP 
Sbjct: 1079 PRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPN 1138

Query: 3372 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3551
            + +  D +R++ LHM  S +S++ +I +H    +IKLK EH+ +     LR++P   D++
Sbjct: 1139 LVVKLDMQRIEDLHMGISADSVQLSILNH---PRIKLKSEHVRVIDKAKLRVYPTAIDKS 1195

Query: 3552 RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTK 3731
            +L +EL++LKSMLPKVIVKGI TV+RAVI+   DKY+LLVEGTNLLAVMGTPGVDA KTK
Sbjct: 1196 KLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTNLLAVMGTPGVDAMKTK 1255

Query: 3732 SNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFG 3911
            SNH+ME+ +TLGIEAAR  II EIQ TM SHGM+ID+RHMMLLAD+MTYKGE+LGITR+G
Sbjct: 1256 SNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYG 1315

Query: 3912 MTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIE 4091
            + KMK S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR++
Sbjct: 1316 IAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLD 1375

Query: 4092 QL 4097
             L
Sbjct: 1376 HL 1377


>ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza sativa
            Japonica Group]
 emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group]
 emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group]
 dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group]
 emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa]
 emb|CAH67535.1| H0425E08.3 [Oryza sativa]
 dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group]
 gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group]
 dbj|BAS89853.1| Os04g0492300 [Oryza sativa Japonica Group]
          Length = 1383

 Score = 1931 bits (5002), Expect = 0.0
 Identities = 974/1376 (70%), Positives = 1125/1376 (81%), Gaps = 12/1376 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF  FSG ++R+ AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHE-MKPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D+RMG ANK   C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R EFL K RNP+AD  QK+ IMK VR+KCK  SRCP CG ING   K ++ 
Sbjct: 120  SRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L +  +   T+D S EE R ALSH KEK+S   V +L P+ VL+LFK+M DEDCELL+LG
Sbjct: 179  LIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV V  G+ SNED +T              E+L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFM 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP KHPGANF+I PDGT+L
Sbjct: 359  SPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKL 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
            HLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  HLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKD FYDR++FSL+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNACTKV 598

Query: 1803 FVNLIVKERIH------VKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVL 1964
            F+NL VKE+I+        + E MCP DG+VYFRNSEL+ GQ+GK TLGNGNK G+FS L
Sbjct: 599  FLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTL 658

Query: 1965 LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSF 2144
            +RDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LNQ+KKM ID GY+ C   
Sbjct: 659  VRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDL 718

Query: 2145 IDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 2324
            I  Y    L L+PG NAA+TLE  IT VLNEIR+ AG VCM  LHWRNSPLIMSQCGSKG
Sbjct: 719  IASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKG 778

Query: 2325 SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEF 2504
            S INISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEF
Sbjct: 779  SPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 838

Query: 2505 FFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGM 2684
            FFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGIVQF+YGDDGM
Sbjct: 839  FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 898

Query: 2685 DPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSS 2864
            DPAKMEG++G PLNLDQL+ KV+ATCP++ Q++LSP +I+ ++N++LS++D S +DGCS 
Sbjct: 899  DPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSE 958

Query: 2865 AFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKE-DSGTLENVAANISGISAKQLQVFMET 3041
             FK LL+ FL  R+  L+ TR  L L ED   E  S   E++AANISGIS KQLQVF++T
Sbjct: 959  KFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDT 1018

Query: 3042 CISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 3221
            C+SRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA
Sbjct: 1019 CLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1078

Query: 3222 KNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERL 3401
            K ISTPIITA L  +    SAR+VKG +EK VL EVAEA+KIV KS+QP + +  D +R+
Sbjct: 1079 KKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRI 1138

Query: 3402 KTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLK 3581
            + LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P   D+++L +EL+ LK
Sbjct: 1139 EALHMGISADSVQLSILNH---PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLK 1195

Query: 3582 SMLPKVIVKGISTVDRAVIN---CQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVME 3749
            SMLPKVIVKGI TV+RAVI+    + DK Y LLVEGTNLLAVMGTPGVDA KTKSNH+ME
Sbjct: 1196 SMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIME 1255

Query: 3750 IWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKD 3929
            + +TLGIEAAR  II EIQ TMKSHGM+ID+RHMMLLAD+MTYKGE+LGITR+G+ KMK 
Sbjct: 1256 VNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKS 1315

Query: 3930 SILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR++ L
Sbjct: 1316 SVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHL 1371


>ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Dendrobium
            catenatum]
          Length = 1373

 Score = 1896 bits (4912), Expect = 0.0
 Identities = 954/1368 (69%), Positives = 1107/1368 (80%), Gaps = 4/1368 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            M  GAEKLRCTKEPYIE  G ++I+SIRF   SG+DIRK AEVQVW N +YD   +KP  
Sbjct: 1    MNQGAEKLRCTKEPYIEVNGHQRIESIRFSVHSGDDIRKQAEVQVWKNVVYDVN-IKPAP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
             GL+D RMGP N+   C TCHG FT+CPGHFG+L+LTLPVFNVGYFNSILNILKCICKAC
Sbjct: 60   DGLLDLRMGPPNRNFTCATCHGNFTECPGHFGWLKLTLPVFNVGYFNSILNILKCICKAC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
            GRILL E ER+ FL   R PRAD  QK++++K +R KC S   C  CG+ NG V K  S 
Sbjct: 120  GRILLLESERRIFLKTMRKPRADPTQKDHLLKKIRQKCGS--ECLHCGYKNGVVKKLGSS 177

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALFK+M D+DCELL+L 
Sbjct: 178  LTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALFKRMLDQDCELLNLN 237

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYN 905
             RPE LI+T+IA+PP+PIRPSVI+ +G S E+ +T              EDL+GAAPL+ 
Sbjct: 238  DRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNSILREDLEGAAPLFK 297

Query: 906  CLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVIS 1085
            CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVIS
Sbjct: 298  CLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVIS 357

Query: 1086 PDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLH 1265
            PDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+PGANF +L  G+ + 
Sbjct: 358  PDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYPGANFAVLSSGSTMD 417

Query: 1266 LKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 1445
            LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRARIMPW+TLRFNES
Sbjct: 418  LKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRARIMPWKTLRFNES 477

Query: 1446 VCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1625
            VCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 478  VCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFL 537

Query: 1626 ITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVF 1805
            ITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF
Sbjct: 538  ITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVF 597

Query: 1806 VNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDY 1976
            +NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGNG+K GLFSVLLRDY
Sbjct: 598  LNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGNGSKDGLFSVLLRDY 657

Query: 1977 NSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLY 2156
            N+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TIDDG R C  FI  Y
Sbjct: 658  NAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTIDDGNRECLDFIAKY 717

Query: 2157 ENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAIN 2336
               +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS IN
Sbjct: 718  NKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSPLIMSQCGSKGSPIN 777

Query: 2337 ISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHT 2516
            ISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANSFYTGLTATEFFFHT
Sbjct: 778  ISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANSFYTGLTATEFFFHT 837

Query: 2517 MGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAK 2696
            M GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I QF+YGDDG+DPAK
Sbjct: 838  MAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAIAQFLYGDDGLDPAK 897

Query: 2697 MEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKN 2876
            MEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ +M+PE GCSS FK 
Sbjct: 898  MEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRCEMAPEGGCSSEFKQ 957

Query: 2877 LLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISR 3053
             LSDF+ KR+  L++TR  L+L E+    +     E ++  ISGISAKQL+VF+ETCISR
Sbjct: 958  KLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGISAKQLEVFLETCISR 1017

Query: 3054 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3233
            Y+ KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINAAKNIS
Sbjct: 1018 YYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINAAKNIS 1077

Query: 3234 TPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3413
            TP+I   L       SAR+VKG +EKT L EV++ +KIV K +Q YIS++ D ER+++L 
Sbjct: 1078 TPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTYISVVLDMERIESLQ 1137

Query: 3414 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3593
            M  S ES++ AI +H    +I LK EH+       L+I  P+  +++L F L+S+ ++LP
Sbjct: 1138 MRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKDQL-FPLHSMNTLLP 1193

Query: 3594 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3773
            KVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT +NHV+E+ QTLGIE
Sbjct: 1194 KVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTTTNHVIEVCQTLGIE 1253

Query: 3774 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 3953
            AAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG+TKMK+S+LMLASF
Sbjct: 1254 AARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFGLTKMKNSVLMLASF 1313

Query: 3954 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            EKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR++ L
Sbjct: 1314 EKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRVQDL 1361


>gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1395

 Score = 1894 bits (4905), Expect = 0.0
 Identities = 953/1368 (69%), Positives = 1106/1368 (80%), Gaps = 4/1368 (0%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            M  GAEKLRCTKEPYIE  G ++I+SIRF   SG+DIRK AEVQVW N +YD   +KP  
Sbjct: 1    MNQGAEKLRCTKEPYIEVNGHQRIESIRFSVHSGDDIRKQAEVQVWKNVVYDVN-IKPAP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
             GL+D RMGP N+   C TCHG FT+CPGHFG+L+LTLPVFNVGYFNSILNILKCICKAC
Sbjct: 60   DGLLDLRMGPPNRNFTCATCHGNFTECPGHFGWLKLTLPVFNVGYFNSILNILKCICKAC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
            GRILL E ER+ FL   R PRAD  QK++++K +R KC S   C  CG+ NG V K  S 
Sbjct: 120  GRILLLESERRIFLKTMRKPRADPTQKDHLLKKIRQKCGS--ECLHCGYKNGVVKKLGSS 177

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALFK+M D+DCELL+L 
Sbjct: 178  LTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALFKRMLDQDCELLNLN 237

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYN 905
             RPE LI+T+IA+PP+PIRPSVI+ +G S E+ +T              EDL+GAAPL+ 
Sbjct: 238  DRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNSILREDLEGAAPLFK 297

Query: 906  CLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVIS 1085
            CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVIS
Sbjct: 298  CLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVIS 357

Query: 1086 PDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLH 1265
            PDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+PGANF +L  G+ + 
Sbjct: 358  PDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYPGANFAVLSSGSTMD 417

Query: 1266 LKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 1445
            LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRARIMPW+TLRFNES
Sbjct: 418  LKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRARIMPWKTLRFNES 477

Query: 1446 VCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1625
            VCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 478  VCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFL 537

Query: 1626 ITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVF 1805
            ITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF
Sbjct: 538  ITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVF 597

Query: 1806 VNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDY 1976
            +NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGNG+K GLFSVLLRDY
Sbjct: 598  LNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGNGSKDGLFSVLLRDY 657

Query: 1977 NSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLY 2156
            N+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TIDDG R C  FI  Y
Sbjct: 658  NAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTIDDGNRECLDFIAKY 717

Query: 2157 ENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAIN 2336
               +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS IN
Sbjct: 718  NKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSPLIMSQCGSKGSPIN 777

Query: 2337 ISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHT 2516
            ISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANSFYTGLTATEFFFHT
Sbjct: 778  ISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANSFYTGLTATEFFFHT 837

Query: 2517 MGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAK 2696
            M GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I QF+YGDDG+DPAK
Sbjct: 838  MAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAIAQFLYGDDGLDPAK 897

Query: 2697 MEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKN 2876
            MEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ +M+PE GCSS FK 
Sbjct: 898  MEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRCEMAPEGGCSSEFKQ 957

Query: 2877 LLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISR 3053
             LSDF+ KR+  L++TR  L+L E+    +     E ++  ISGISAKQL+VF+ETCISR
Sbjct: 958  KLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGISAKQLEVFLETCISR 1017

Query: 3054 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3233
            Y+ KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINAAKNIS
Sbjct: 1018 YYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINAAKNIS 1077

Query: 3234 TPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3413
            TP+I   L       SAR+VKG +EKT L EV++ +KIV K +Q YIS++ D ER+++L 
Sbjct: 1078 TPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTYISVVLDMERIESLQ 1137

Query: 3414 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3593
            M  S ES++ AI +H    +I LK EH+       L+I  P+  +++L F L+S+ ++LP
Sbjct: 1138 MRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKDQL-FPLHSMNTLLP 1193

Query: 3594 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3773
            KVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT +NHV+E+ QTLGIE
Sbjct: 1194 KVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTTTNHVIEVCQTLGIE 1253

Query: 3774 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 3953
            AAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG+TKMK+S+LMLASF
Sbjct: 1254 AARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFGLTKMKNSVLMLASF 1313

Query: 3954 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            EKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR  ++
Sbjct: 1314 EKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRYAEI 1361


>ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [Sorghum bicolor]
 gb|EES11045.1| hypothetical protein SORBI_3006G131200 [Sorghum bicolor]
          Length = 1391

 Score = 1891 bits (4898), Expect = 0.0
 Identities = 955/1384 (69%), Positives = 1114/1384 (80%), Gaps = 20/1384 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWNN +Y    +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHD-MKPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG  NK+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLSLFRRMTDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIV+EIA+PP PIRPSV+VGS + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEY+NS+AP +P+S+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPCLPDSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKDTFYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRV 598

Query: 1803 FVNLIVKERIHVKDT-------------ETMCPRDGYVYFRNSELICGQLGKVTLGNGNK 1943
            F+NL V+E+I+ K               ETMCP DGYVYFRNSEL+ GQ+GK TLGNGNK
Sbjct: 599  FLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNK 658

Query: 1944 SGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDG 2123
             GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  ID G
Sbjct: 659  DGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGG 718

Query: 2124 YRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIM 2303
            Y++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSPLIM
Sbjct: 719  YKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIM 778

Query: 2304 SQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYT 2483
            SQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANSFYT
Sbjct: 779  SQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYT 838

Query: 2484 GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQF 2663
            GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGIVQF
Sbjct: 839  GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQF 898

Query: 2664 IYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMS 2843
            +YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++L ++D S
Sbjct: 899  LYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTS 958

Query: 2844 PEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGISAKQ 3020
             + GCS  FK  L++FL KR+  ++ TR  L L ED  +K+DS   E+VAA ISGISAKQ
Sbjct: 959  SDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQ 1018

Query: 3021 LQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRI 3200
            LQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1019 LQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1078

Query: 3201 KEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISI 3380
            KEIINAA+ ISTPIITA L       SAR+VKG +EK VL EVA A++IV KS+QP + +
Sbjct: 1079 KEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIV 1138

Query: 3381 IFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLH 3560
              D + +++LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +D+ +L 
Sbjct: 1139 KLDMQLIESLHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQ 1195

Query: 3561 FELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTPGVDASK 3725
             EL++LKS+LPKVIVKGI TV+R VI+  K     ++Y LLVEGTNLLAVMGTPGVDA+K
Sbjct: 1196 LELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPGVDATK 1255

Query: 3726 TKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITR 3905
            TKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LGITR
Sbjct: 1256 TKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITR 1315

Query: 3906 FGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQR 4085
            +G+ KMK S+LMLASFEKTSEHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR
Sbjct: 1316 YGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQR 1375

Query: 4086 IEQL 4097
            ++ +
Sbjct: 1376 LDHV 1379


>ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
 gb|ONM16380.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1880 bits (4871), Expect = 0.0
 Identities = 952/1387 (68%), Positives = 1111/1387 (80%), Gaps = 23/1387 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1803 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLGN 1934
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 1935 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2114
            GNK GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEI 718

Query: 2115 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2294
            D GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 719  DGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSP 778

Query: 2295 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2474
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANS
Sbjct: 779  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANS 838

Query: 2475 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2654
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 839  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 898

Query: 2655 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2834
            VQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  ++
Sbjct: 899  VQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFLQH 958

Query: 2835 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3011
            D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISGIS
Sbjct: 959  DTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISGIS 1018

Query: 3012 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3191
            AKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3192 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPY 3371
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VL EVA  ++ V KS+ P 
Sbjct: 1079 PRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPN 1138

Query: 3372 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3551
            + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D+ 
Sbjct: 1139 LVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTDKL 1195

Query: 3552 RLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPGVD 3716
            +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPGVD
Sbjct: 1196 KLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGVD 1255

Query: 3717 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3896
            A KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LG
Sbjct: 1256 ARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILG 1315

Query: 3897 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4076
            ITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGILKV
Sbjct: 1316 ITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILKV 1375

Query: 4077 RQRIEQL 4097
            RQR++ +
Sbjct: 1376 RQRLDHV 1382


>ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [Setaria italica]
          Length = 1397

 Score = 1873 bits (4851), Expect = 0.0
 Identities = 952/1390 (68%), Positives = 1106/1390 (79%), Gaps = 26/1390 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHD-MKPVP 59

Query: 186  HGLIDSRMGPANKKTV---CGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCIC 356
            +GL+D RMG A+KK     C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCIC
Sbjct: 60   NGLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCIC 119

Query: 357  KACGRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKA 536
            K C R+LL EK+R+EFL K RNPRAD  QK+ IMK VR+KCK  + CPRC + NG V K 
Sbjct: 120  KGCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCK-LTCCPRCEYKNGVVKKG 178

Query: 537  KSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELL 716
            +  L V  +    +D   EE + AL H KEKVS   V +L P+  L+LF++M DEDCELL
Sbjct: 179  RVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVDEDCELL 238

Query: 717  HLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAA 893
            +LG RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L    
Sbjct: 239  NLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGG 298

Query: 894  PLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGR 1073
                C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGR
Sbjct: 299  LFSKCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 358

Query: 1074 TVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDG 1253
            TVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDG
Sbjct: 359  TVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDG 418

Query: 1254 TRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 1433
            T+L LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 419  TKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 478

Query: 1434 FNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLT 1613
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 479  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 538

Query: 1614 SSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQ 1793
            SSFL+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+
Sbjct: 539  SSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAR 598

Query: 1794 TRVFVNLIVKERIHVKDTE----------------TMCPRDGYVYFRNSELICGQLGKVT 1925
            T+VF+NL VKE+I+ K  E                TMCP DGYVYFRNSEL+ GQ+GK T
Sbjct: 599  TKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 658

Query: 1926 LGNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKK 2105
            LGNGNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK
Sbjct: 659  LGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 718

Query: 2106 MTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWR 2285
              ID+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR  AG+VCM  LHWR
Sbjct: 719  KKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWR 778

Query: 2286 NSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFV 2465
            NSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFV
Sbjct: 779  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV 838

Query: 2466 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSAS 2645
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+AS
Sbjct: 839  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 898

Query: 2646 GGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERL 2825
            GGIVQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+LSP  I  ++ ++L
Sbjct: 899  GGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKL 958

Query: 2826 SKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANIS 3002
            +++  S + GCS  FK  L  FL +R+  L+ TR  L L E    K DS   E +AANIS
Sbjct: 959  TQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANIS 1018

Query: 3003 GISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3182
            GISAKQLQVF++TC SRY+ K +E              EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1019 GISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1078

Query: 3183 LGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSN 3362
            LGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VL EVA A+KIV KS+
Sbjct: 1079 LGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSS 1138

Query: 3363 QPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVS 3542
            QP + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +
Sbjct: 1139 QPNLVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGT 1195

Query: 3543 DRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTP 3707
            D+++L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLLVEGTNLLAVMGTP
Sbjct: 1196 DKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTP 1255

Query: 3708 GVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGE 3887
            GVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE
Sbjct: 1256 GVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGE 1315

Query: 3888 VLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGI 4067
            VLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTGI
Sbjct: 1316 VLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGI 1375

Query: 4068 LKVRQRIEQL 4097
            LKVRQR++ L
Sbjct: 1376 LKVRQRLDHL 1385


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1870 bits (4845), Expect = 0.0
 Identities = 952/1385 (68%), Positives = 1106/1385 (79%), Gaps = 21/1385 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   +++  TKEPYIEDVGPRKIKSIRF  FSG++IRK AEVQVW +  YD    KP+ 
Sbjct: 1    MANTQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNR-KPID 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
             GL+DSRMGPA+K  +C TC G FTDCPGHFGYL L LPVFNVGYF++IL+ILKCICK+C
Sbjct: 60   DGLLDSRMGPASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKC------KSFSRCPRCGHINGNV 527
             RILL E++RK++L K R+ +AD  QKNN+MK +  KC      K   +C RCG+ING V
Sbjct: 120  ARILLEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFV 179

Query: 528  SKAKS------QLAVAENFRTTVDESLEECRAALSHLKE-KVSFQPVHLLTPSKVLALFK 686
             K  S       L +  +     DESLEEC +A+SH KE K SF+ VH+L P ++LALFK
Sbjct: 180  KKGASISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESKASFRVVHVLNPVRILALFK 239

Query: 687  KMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVIVGSG-QSNEDGLTAXXXXXXXXXX 863
            +M DEDCELL+L  RPE LI+T+IA+PP  IRPSV + +G  SNED +T+          
Sbjct: 240  RMVDEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANA 299

Query: 864  XXXEDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKH-----RGLVQRLKGKQGR 1028
               +DL GA P   CL  W+ LQ  V +YINS+   +P S       RG VQRLKGKQGR
Sbjct: 300  PLRQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFVQRLKGKQGR 359

Query: 1029 FRCNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNG 1208
            FR NLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQ+LTYPERV+HHNIEKLRQCVRNG
Sbjct: 360  FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEKLRQCVRNG 419

Query: 1209 PFKHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMS 1388
              K+PGANF+  PDG+ ++L++  +K  A+ELKYG +VERHLEDGDIVLFNRQPSLHRMS
Sbjct: 420  SQKYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMS 479

Query: 1389 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTP 1568
            IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA MLMGVQNNLCTP
Sbjct: 480  IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTP 539

Query: 1569 KNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELW 1748
            KNG ILVASTQDFLTS+FLITRKDTFYDRAAFSLMCSY+GDGM+ +DLPTPALIKPIELW
Sbjct: 540  KNGAILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELW 599

Query: 1749 TGKQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTL 1928
            TGKQLFSVLVRP+A  RV++NL V E+  VK  ETMCP DG+VYFRNSELICGQLGK TL
Sbjct: 600  TGKQLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELICGQLGKATL 659

Query: 1929 GNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKM 2108
            GNGNK GLFSVLLRDYN+  AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE L  +KK 
Sbjct: 660  GNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKE 719

Query: 2109 TIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRN 2288
            TI+DGY+ C   I  Y    L L+PG +AA+TLE +IT  LNEIR+    VCM+ELHWRN
Sbjct: 720  TIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRN 779

Query: 2289 SPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVA 2468
            SPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDR+LPHFP KSK PAAKGFVA
Sbjct: 780  SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVA 839

Query: 2469 NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASG 2648
            NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDL++YYD TVR+ASG
Sbjct: 840  NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASG 899

Query: 2649 GIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLS 2828
            G+VQF+YGDDG+DPA MEG+ GIPLNL+++Y K  ATCP     SL PS+IV ++++R+S
Sbjct: 900  GVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRIS 959

Query: 2829 KYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISG 3005
            +YDM+P+ GCSSAFK LL DF+  R++ LR TR  L L E+  +K++S  LE++AANISG
Sbjct: 960  RYDMTPDGGCSSAFKKLLVDFIQNRISILRNTRKALGLDEEYAKKDNSDILEHIAANISG 1019

Query: 3006 ISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTL 3185
            I+ +QL+VF+ETCISRYH K++E              EPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1020 ITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1079

Query: 3186 GVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQ 3365
            GVPRIKEIIN AKNISTPIITATL CDD  +SAR+VKG IEKTVL EVA+++KIV    Q
Sbjct: 1080 GVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIVMTQRQ 1139

Query: 3366 PYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSD 3545
              I I  D  R++   ++ S +S+K +I  H +    K K + +  +G   L + P  SD
Sbjct: 1140 ASIVISLDMARIEAAQLKISADSVKESILKHLN---PKFKPKIVVDKGY-KLIVIPTESD 1195

Query: 3546 RNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKD-KYNLLVEGTNLLAVMGTPGVDAS 3722
            R++LHFEL++LK++LP+VIVKGISTV RAVIN  KD KYNLLVEGTNLL VMGTPGVD  
Sbjct: 1196 RSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKDGKYNLLVEGTNLLGVMGTPGVDGC 1255

Query: 3723 KTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGIT 3902
            KT SNH++E+  TLGIEAAR CII EIQ TM  HGM ID RHMMLLAD+MTYKGEVLGIT
Sbjct: 1256 KTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMDIDIRHMMLLADLMTYKGEVLGIT 1315

Query: 3903 RFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQ 4082
            R G+ KMK+S+LMLASFEKT++HLFNAS NGRDD+IEGVSECII+GIPMQ+GTGILKV Q
Sbjct: 1316 RTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIILGIPMQIGTGILKVIQ 1375

Query: 4083 RIEQL 4097
            R  Q+
Sbjct: 1376 RYPQV 1380


>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
          Length = 1394

 Score = 1869 bits (4841), Expect = 0.0
 Identities = 948/1387 (68%), Positives = 1103/1387 (79%), Gaps = 23/1387 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHD-MKPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RM   + +  C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK C
Sbjct: 60   NGLLDMRMVMTHTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R+EFL K RNPRAD  QK+ IMK VR+KCK  + CPRC + NG V K +  
Sbjct: 120  SRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCK-LTCCPRCEYKNGVVKKGRVG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L V  +    +D   EE + AL H KEKVS   V +L P+  L+LF++M DEDCELL+LG
Sbjct: 179  LIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGGLFS 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDGT+L
Sbjct: 359  SPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDGTKL 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
             LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+T+V
Sbjct: 539  LVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNARTKV 598

Query: 1803 FVNLIVKERIHVKDTE----------------TMCPRDGYVYFRNSELICGQLGKVTLGN 1934
            F+NL VKE+I+ K  E                TMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 1935 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2114
            GNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKI 718

Query: 2115 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2294
            D+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 719  DEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSP 778

Query: 2295 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2474
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 779  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANS 838

Query: 2475 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2654
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 839  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 898

Query: 2655 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2834
            VQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+LSP  I  ++ ++L+++
Sbjct: 899  VQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQH 958

Query: 2835 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3011
              S + GCS  FK  L  FL +R+  L+ TR  L L E    K DS   E +AANISGIS
Sbjct: 959  KTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGIS 1018

Query: 3012 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3191
            AKQLQVF++TC SRY+ K +E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3192 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPY 3371
            PRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VL EVA A+KIV KS+QP 
Sbjct: 1079 PRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPN 1138

Query: 3372 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3551
            + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +D++
Sbjct: 1139 LVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGTDKS 1195

Query: 3552 RLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTPGVD 3716
            +L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLLVEGTNLLAVMGTPGVD
Sbjct: 1196 KLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPGVD 1255

Query: 3717 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3896
            A  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGEVLG
Sbjct: 1256 ARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLG 1315

Query: 3897 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4076
            ITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTGILKV
Sbjct: 1316 ITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKV 1375

Query: 4077 RQRIEQL 4097
            RQR++ L
Sbjct: 1376 RQRLDHL 1382


>gb|ONM16376.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1389

 Score = 1868 bits (4838), Expect = 0.0
 Identities = 948/1387 (68%), Positives = 1107/1387 (79%), Gaps = 23/1387 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1803 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLGN 1934
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 1935 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2114
            GNK GL+SVLLRDYNS  AASCMNR     AR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGLYSVLLRDYNSHAAASCMNR-----ARFIGNHGFSIGVDDVQPGEHLNRQKKKEI 713

Query: 2115 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2294
            D GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 714  DGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSP 773

Query: 2295 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2474
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANS
Sbjct: 774  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANS 833

Query: 2475 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2654
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 834  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 893

Query: 2655 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2834
            VQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  ++
Sbjct: 894  VQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFLQH 953

Query: 2835 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3011
            D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISGIS
Sbjct: 954  DTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISGIS 1013

Query: 3012 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3191
            AKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1014 AKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1073

Query: 3192 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPY 3371
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VL EVA  ++ V KS+ P 
Sbjct: 1074 PRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPN 1133

Query: 3372 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3551
            + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D+ 
Sbjct: 1134 LVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTDKL 1190

Query: 3552 RLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPGVD 3716
            +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPGVD
Sbjct: 1191 KLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGVD 1250

Query: 3717 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3896
            A KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LG
Sbjct: 1251 ARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILG 1310

Query: 3897 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4076
            ITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGILKV
Sbjct: 1311 ITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILKV 1370

Query: 4077 RQRIEQL 4097
            RQR++ +
Sbjct: 1371 RQRLDHV 1377


>gb|ONM16381.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1867 bits (4837), Expect = 0.0
 Identities = 950/1389 (68%), Positives = 1109/1389 (79%), Gaps = 25/1389 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 186  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 365
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 366  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 545
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 546  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 725
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 726  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 902
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 903  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1082
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1083 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1262
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1263 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1442
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1443 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1622
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1623 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1802
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1803 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLG- 1931
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLG 
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 1932 -NGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKM 2108
             NGNK GL+SVLLRDYNS  AASCMNRLAK   R+IGNHGFSIG+DDVQPGE LN+QKK 
Sbjct: 659  CNGNKDGLYSVLLRDYNSHAAASCMNRLAKF--RFIGNHGFSIGVDDVQPGEHLNRQKKK 716

Query: 2109 TIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRN 2288
             ID GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRN
Sbjct: 717  EIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRN 776

Query: 2289 SPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVA 2468
            SPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVA
Sbjct: 777  SPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVA 836

Query: 2469 NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASG 2648
            NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASG
Sbjct: 837  NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASG 896

Query: 2649 GIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLS 2828
            GIVQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  
Sbjct: 897  GIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFL 956

Query: 2829 KYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISG 3005
            ++D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISG
Sbjct: 957  QHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISG 1016

Query: 3006 ISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTL 3185
            ISAKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1017 ISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1076

Query: 3186 GVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQ 3365
            GVPRIKEIINAAK ISTPIITA L       SAR+VKG +EK VL EVA  ++ V KS+ 
Sbjct: 1077 GVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSL 1136

Query: 3366 PYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSD 3545
            P + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D
Sbjct: 1137 PNLVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTD 1193

Query: 3546 RNRLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPG 3710
            + +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPG
Sbjct: 1194 KLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPG 1253

Query: 3711 VDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEV 3890
            VDA KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+
Sbjct: 1254 VDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEI 1313

Query: 3891 LGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGIL 4070
            LGITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGIL
Sbjct: 1314 LGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGIL 1373

Query: 4071 KVRQRIEQL 4097
            KVRQR++ +
Sbjct: 1374 KVRQRLDHV 1382


>gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]
          Length = 1398

 Score = 1865 bits (4830), Expect = 0.0
 Identities = 948/1391 (68%), Positives = 1107/1391 (79%), Gaps = 27/1391 (1%)
 Frame = +3

Query: 6    MAWGAEKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 185
            MA   EKLRCTKEP+IEDVG R+IKSIRF   SG +IRK AEVQVW++ +Y    +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWSSRIY-GNDMKPVP 59

Query: 186  HGLIDSRMGPANKK---TVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCIC 356
            +GL+D RMG  +K+   +VC TC+G F++CPGHFGYL+L LPVFNVG+FN IL++LKCIC
Sbjct: 60   NGLLDMRMGLPSKRDKDSVCSTCYGPFSECPGHFGYLKLALPVFNVGFFNCILDVLKCIC 119

Query: 357  KACGRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKA 536
            K C R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK+ + CPRC + NG V K 
Sbjct: 120  KGCSRVLLSEKDRREFLKKMRNPRADALQKSATMKKVRDKCKT-TCCPRCEYRNGVVKKG 178

Query: 537  KSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELL 716
            ++ L V  +    +D   EE + AL H KEKVS   V +L P+ VL+LF++M DEDCELL
Sbjct: 179  RAGLIVIHDCSKILDGHAEELKNALQHKKEKVSTSSVRMLDPATVLSLFRRMTDEDCELL 238

Query: 717  HLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAA 893
            +LG RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L    
Sbjct: 239  NLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGG 298

Query: 894  PLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGR 1073
                C +CW  LQ  VVEY+NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGR
Sbjct: 299  LFNKCFDCWQQLQLQVVEYVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 358

Query: 1074 TVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDG 1253
            TVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDG
Sbjct: 359  TVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDG 418

Query: 1254 TRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 1433
            TRL LKY +++  A +LK G +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 419  TRLSLKYGDRRIAARDLKCGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 478

Query: 1434 FNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLT 1613
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 479  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 538

Query: 1614 SSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQ 1793
            SSFL+TRKDTFYDR++F+LMCSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+
Sbjct: 539  SSFLVTRKDTFYDRSSFTLMCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAR 598

Query: 1794 TRVFVNLIVKERIHVK----------------DTETMCPRDGYVYFRNSELICGQLGKVT 1925
            T+VF+NL VKE+I+ K                  ETMCP DGYVYFRNSEL+ GQ+GK T
Sbjct: 599  TKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 658

Query: 1926 LGNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKK 2105
            LGNGNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK
Sbjct: 659  LGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 718

Query: 2106 MTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWR 2285
              ID+GY++C   I L+    L L PG NAAETLE  IT VLNEIR  AG+VCM  LHWR
Sbjct: 719  KKIDEGYKQCHDLISLFAKGALALHPGCNAAETLEHRITGVLNEIRTAAGNVCMDTLHWR 778

Query: 2286 NSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFV 2465
            NSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFV
Sbjct: 779  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV 838

Query: 2466 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSAS 2645
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+AS
Sbjct: 839  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 898

Query: 2646 GGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERL 2825
            GGI+QF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP++  D+LSP+ I  ++ ++L
Sbjct: 899  GGIIQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPQRGPDTLSPADIRQMLEDKL 958

Query: 2826 SKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANIS 3002
            +++  S + GCS  F+  L +F  KR+  L  TR  L L      K+DS   E VAANIS
Sbjct: 959  TQHGTSSDGGCSQEFEKGLREFFEKRINLLECTRRALHLDVGHVGKKDSCIEEFVAANIS 1018

Query: 3003 GISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3182
            GISAKQLQVF++TC SRYH K +E              EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1019 GISAKQLQVFLDTCFSRYHSKTIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1078

Query: 3183 LGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSN 3362
            LGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VL EVA  +KI+ K +
Sbjct: 1079 LGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASDIKIILKPS 1138

Query: 3363 QPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVS 3542
            Q  + +  D + ++ LHM  S ++++ +I  H    KIKLK EH+ +     L+I+P  +
Sbjct: 1139 QANLVVKLDMQLIEALHMGISADTVQLSILKH---PKIKLKPEHVRVIDRAKLKIYPAGT 1195

Query: 3543 DRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK------DKYNLLVEGTNLLAVMGT 3704
            D+++L  EL++LKSMLPKVIVKGI TV+R VI+  K      +KYNLLVEGTNLLAVMGT
Sbjct: 1196 DKSKLQLELHNLKSMLPKVIVKGIPTVERVVIDEIKKKDNTVEKYNLLVEGTNLLAVMGT 1255

Query: 3705 PGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKG 3884
            PGVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKG
Sbjct: 1256 PGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKG 1315

Query: 3885 EVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTG 4064
            EVLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTG
Sbjct: 1316 EVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTG 1375

Query: 4065 ILKVRQRIEQL 4097
            ILKVRQR+++L
Sbjct: 1376 ILKVRQRLDRL 1386


>ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
 ref|XP_020575430.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
          Length = 1379

 Score = 1860 bits (4818), Expect = 0.0
 Identities = 943/1368 (68%), Positives = 1085/1368 (79%), Gaps = 9/1368 (0%)
 Frame = +3

Query: 21   EKLRCTKEPYIEDVGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 200
            EKLRCTKEPYIE  G  +I++I F   SG++IR+ AEVQVW + +YD   VKPV +GL+D
Sbjct: 6    EKLRCTKEPYIEVTGHHRIENIHFSVHSGDEIRRHAEVQVWKDSIYDIN-VKPVPNGLLD 64

Query: 201  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 380
             RMGP N+   C TCHG F +CPGHFG L LTLPVFN+GYFNSILNILKCICKACGRILL
Sbjct: 65   LRMGPPNRNFTCATCHGTFAECPGHFGCLELTLPVFNIGYFNSILNILKCICKACGRILL 124

Query: 381  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 560
             EKERK FL   R PRAD  QK++++K +R KC SF  C  CG+ NG V K  S L + E
Sbjct: 125  SEKERKFFLRIIRKPRADPTQKDHLLKKIREKC-SF-HCFHCGYKNGVVKKLGSSLTIVE 182

Query: 561  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 740
            +   T+D    E R ALSH+K+  SFQ ++ L P KVL+LFK+M  EDCELL++  RPE 
Sbjct: 183  DLTKTIDGRAYEIRVALSHMKDNASFQSINALRPLKVLSLFKRMLVEDCELLNMKDRPEK 242

Query: 741  LIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLECW 920
             I+T+IA+PP+PIRPS ++ S  SNED +TA             EDL+GAAPL+ CLECW
Sbjct: 243  FIITDIAVPPSPIRPSALMDSEMSNEDDITAILKGIINTNSILREDLEGAAPLFKCLECW 302

Query: 921  NLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPNL 1100
            +LLQ  V EYINSEAPSVP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVISPDPNL
Sbjct: 303  DLLQVRVAEYINSEAPSVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNL 362

Query: 1101 KITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYVE 1280
            KITEV IP LMAQ+LTYPERV+ HNIEKLRQ VRNG  K+PGANFV L  G+ + LKY  
Sbjct: 363  KITEVGIPTLMAQILTYPERVSCHNIEKLRQRVRNGRSKYPGANFVALSSGSTMDLKYGA 422

Query: 1281 KKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPY 1460
            +KN+AN LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRA+IMPWRTLRFNESVCNPY
Sbjct: 423  RKNIANNLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRAKIMPWRTLRFNESVCNPY 482

Query: 1461 NADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 1640
            NADFDGDEMNLHVPQ EEARTEA ML+GVQNNLCTPKNGEILVASTQDFLTSSFLITRKD
Sbjct: 483  NADFDGDEMNLHVPQIEEARTEALMLLGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 542

Query: 1641 TFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLIV 1820
            TFYDRA F+LMCSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF+NL V
Sbjct: 543  TFYDRANFALMCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVFLNLTV 602

Query: 1821 KERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVA 1991
             E+   K     ETMCPRDG+VYFRNSELI GQLGK TLGNG K GLFSVLLRDYN+  A
Sbjct: 603  IEKGFSKPQNLCETMCPRDGFVYFRNSELISGQLGKATLGNGGKDGLFSVLLRDYNAYAA 662

Query: 1992 ASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDG------YRRCSSFIDL 2153
             +CMNRLAKLSARWIGNHGFSIGIDDVQPGERLN+QKK TIDDG         C  FI  
Sbjct: 663  VNCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNRQKKRTIDDGEXXXXXXXXCRDFITK 722

Query: 2154 YENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAI 2333
            Y   +LTL+ G +AA+TLE+EI  VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS I
Sbjct: 723  YNKGELTLQTGCDAAQTLELEIYNVLNKIRSAAGNVCMDELHWRNSPLIMSQCGSKGSPI 782

Query: 2334 NISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFH 2513
            NISQMIA VGQQSVGGRRAPNGFIDRTLPHFPI SK P+AKGFVANSFYTGLTATEFFFH
Sbjct: 783  NISQMIALVGQQSVGGRRAPNGFIDRTLPHFPINSKTPSAKGFVANSFYTGLTATEFFFH 842

Query: 2514 TMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPA 2693
            TM GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR A GGIVQ +YGDDG+DPA
Sbjct: 843  TMAGREGLVDTAVKTAETGYMSRRLVKGMEDVSLHYDITVRDACGGIVQLLYGDDGLDPA 902

Query: 2694 KMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFK 2873
            KMEG+ G PLN DQLY KV+ATCP +  D LSP++I+  ++ RL+  D+S E  CS  FK
Sbjct: 903  KMEGKEGNPLNFDQLYMKVMATCPHRDNDILSPAEILQTLHRRLACCDVSSEGCCSLEFK 962

Query: 2874 NLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGISAKQLQVFMETCISR 3053
              LSDF+HK +   +KTR  L+L E+         ENVA  ISGISAKQL+VF+ETCISR
Sbjct: 963  QKLSDFIHKCINRYQKTRQALQLDENSINGGCCKTENVATRISGISAKQLEVFLETCISR 1022

Query: 3054 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3233
            YH KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINA+KNIS
Sbjct: 1023 YHLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNIS 1082

Query: 3234 TPIITATLFCDDREESARLVKGEIEKTVLSEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3413
            TP+I   L       SAR VKG +EKT L EVA  +KIV K +Q YIS++ D ER++ L 
Sbjct: 1083 TPMIKTQLLLSSEALSARTVKGCVEKTALGEVAICIKIVLKPSQSYISVVLDMERIEALQ 1142

Query: 3414 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3593
            M+ + ES++ +I +H    KI LK  H+   G   LRI+ P +D+N++   L+SL ++LP
Sbjct: 1143 MKITSESVRKSILNH---PKIGLKSNHVHTVGSKKLRIYSPAADKNKIQLSLHSLLTLLP 1199

Query: 3594 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3773
            KVIVKGI TV RAVI   K  Y+L VEGTN LAVMGTPGVDASKT SNHV+E+ QTLGIE
Sbjct: 1200 KVIVKGIPTVKRAVIKNDKGLYSLFVEGTNYLAVMGTPGVDASKTTSNHVIEVRQTLGIE 1259

Query: 3774 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 3953
            AAR  II+EI+ TM+ HGMSID RHM LLAD+MTYKGEVLG+TR+G+TKMK S+LMLASF
Sbjct: 1260 AARQTIINEIKFTMEGHGMSIDIRHMKLLADLMTYKGEVLGMTRYGLTKMKSSVLMLASF 1319

Query: 3954 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQL 4097
            EKTS+HLFN S++GRDD I+GVSECIIMGIPM+LGTGILK+RQR+E+L
Sbjct: 1320 EKTSDHLFNGSYSGRDDHIDGVSECIIMGIPMRLGTGILKLRQRVEEL 1367