BLASTX nr result
ID: Ophiopogon26_contig00007627
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00007627
(551 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020252569.1| THO complex subunit 4B-like [Asparagus offic... 77 8e-14
gb|ONK76959.1| uncharacterized protein A4U43_C02F1670 [Asparagus... 77 1e-13
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin... 69 1e-10
ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo n... 69 1e-10
ref|XP_022964653.1| THO complex subunit 4B-like [Cucurbita mosch... 63 1e-08
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 62 2e-08
ref|XP_022970368.1| THO complex subunit 4A-like [Cucurbita maxima] 63 2e-08
ref|XP_011624054.1| THO complex subunit 4A isoform X2 [Amborella... 61 6e-08
ref|XP_006846043.1| THO complex subunit 4A isoform X1 [Amborella... 61 6e-08
gb|OVA03520.1| RNA recognition motif domain [Macleaya cordata] 60 2e-07
ref|XP_007027070.2| PREDICTED: THO complex subunit 4B [Theobroma... 59 5e-07
ref|XP_023520096.1| THO complex subunit 4A-like [Cucurbita pepo ... 59 5e-07
ref|XP_016745039.1| PREDICTED: THO complex subunit 4A-like [Goss... 59 5e-07
ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Goss... 59 5e-07
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss... 59 5e-07
ref|XP_016725317.1| PREDICTED: THO complex subunit 4A-like [Goss... 59 5e-07
ref|XP_021288953.1| THO complex subunit 4B [Herrania umbratica] 58 9e-07
gb|PPD75134.1| hypothetical protein GOBAR_DD27942 [Gossypium bar... 58 9e-07
ref|XP_021278480.1| THO complex subunit 4A [Herrania umbratica] 58 9e-07
ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isofo... 58 9e-07
>ref|XP_020252569.1| THO complex subunit 4B-like [Asparagus officinalis]
Length = 240
Score = 77.0 bits (188), Expect = 8e-14
Identities = 42/85 (49%), Positives = 46/85 (54%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
I IVGTNIEKPVAFPPVAH FGNP+GI
Sbjct: 156 IAIVGTNIEKPVAFPPVAHVNFGNPSGIPQRLRGRGVPAGRPHGGGGRGQSRGGRGRGRG 215
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVS DLDADL+KYH+EAMQ+N
Sbjct: 216 RDEKVSVEDLDADLDKYHREAMQVN 240
>gb|ONK76959.1| uncharacterized protein A4U43_C02F1670 [Asparagus officinalis]
Length = 263
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/85 (49%), Positives = 46/85 (54%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
I IVGTNIEKPVAFPPVAH FGNP+GI
Sbjct: 179 IAIVGTNIEKPVAFPPVAHVNFGNPSGIPQRLRGRGVPAGRPHGGGGRGQSRGGRGRGRG 238
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVS DLDADL+KYH+EAMQ+N
Sbjct: 239 RDEKVSVEDLDADLDKYHREAMQVN 263
>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
emb|CBI16171.3| unnamed protein product, partial [Vitis vinifera]
Length = 243
Score = 68.6 bits (166), Expect = 1e-10
Identities = 40/85 (47%), Positives = 41/85 (48%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A PPV +G FGN NG
Sbjct: 159 IEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRG 218
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQIN
Sbjct: 219 RGEKVSAEDLDADLEKYHSEAMQIN 243
>ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
Length = 244
Score = 68.6 bits (166), Expect = 1e-10
Identities = 39/85 (45%), Positives = 44/85 (51%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IE+VGTNI PVA PP A+G FGNPNG+
Sbjct: 161 IEVVGTNIATPVAVPPAANGGFGNPNGV-PRSGQGRGGAMGRSRGGGGRGFGRGRGRRRD 219
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
E++SA DLDADLEKYH EAMQIN
Sbjct: 220 RGEQISAEDLDADLEKYHSEAMQIN 244
>ref|XP_022964653.1| THO complex subunit 4B-like [Cucurbita moschata]
Length = 242
Score = 62.8 bits (151), Expect = 1e-08
Identities = 38/85 (44%), Positives = 42/85 (49%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
+EIVGTNI P A P A+G FGNPNG
Sbjct: 159 LEIVGTNIVTP-AVPASANGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRGSSSRG 217
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EK+SA DLDADLEKYH+EAMQIN
Sbjct: 218 RGEKLSAEDLDADLEKYHEEAMQIN 242
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/83 (43%), Positives = 40/83 (48%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ PVA PP +G F NPNG+
Sbjct: 158 IEIVGTNVATPVALPPATNGKFANPNGV--PRSGQGRGSFSGRSRGPGRGARRGRGQGRG 215
Query: 183 XXEKVSAADLDADLEKYHQEAMQ 251
EKVSA DLDADLE YH+EAMQ
Sbjct: 216 QGEKVSAEDLDADLENYHKEAMQ 238
>ref|XP_022970368.1| THO complex subunit 4A-like [Cucurbita maxima]
Length = 278
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/85 (44%), Positives = 42/85 (49%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
+EIVGTNI P A P A+G FGNPNG
Sbjct: 195 LEIVGTNIVTP-AVPASANGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGHGSSSRG 253
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EK+SA DLDADLEKYH+EAMQIN
Sbjct: 254 RGEKLSAEDLDADLEKYHEEAMQIN 278
>ref|XP_011624054.1| THO complex subunit 4A isoform X2 [Amborella trichopoda]
Length = 250
Score = 61.2 bits (147), Expect = 6e-08
Identities = 38/88 (43%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ P P VA+G+ PNGI
Sbjct: 163 IEIVGTNLVTPAPIPQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGR 222
Query: 183 XX---EKVSAADLDADLEKYHQEAMQIN 257
EKVSAADLDADLEKYH EAMQIN
Sbjct: 223 GGGRGEKVSAADLDADLEKYHSEAMQIN 250
>ref|XP_006846043.1| THO complex subunit 4A isoform X1 [Amborella trichopoda]
ref|XP_011624053.1| THO complex subunit 4A isoform X1 [Amborella trichopoda]
gb|ERN07718.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 61.2 bits (147), Expect = 6e-08
Identities = 38/88 (43%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ P P VA+G+ PNGI
Sbjct: 166 IEIVGTNLVTPAPIPQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGR 225
Query: 183 XX---EKVSAADLDADLEKYHQEAMQIN 257
EKVSAADLDADLEKYH EAMQIN
Sbjct: 226 GGGRGEKVSAADLDADLEKYHSEAMQIN 253
>gb|OVA03520.1| RNA recognition motif domain [Macleaya cordata]
Length = 246
Score = 59.7 bits (143), Expect = 2e-07
Identities = 37/89 (41%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGI----XXXXXXXXXXXXXXXXXXXXXXXXXXXX 170
IEIVGTNI P P V +GMFGNPNG+
Sbjct: 158 IEIVGTNIVTPAIAPLVTNGMFGNPNGVPRRGHGRGGAMGRFRGGRGGGGRNSSRGRGRG 217
Query: 171 XXXXXXEKVSAADLDADLEKYHQEAMQIN 257
E VS DLDADLEKYH EAMQ+N
Sbjct: 218 RGRGRGEPVSVDDLDADLEKYHSEAMQVN 246
>ref|XP_007027070.2| PREDICTED: THO complex subunit 4B [Theobroma cacao]
Length = 240
Score = 58.5 bits (140), Expect = 5e-07
Identities = 35/83 (42%), Positives = 39/83 (46%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ PVA P +G F NPNG+
Sbjct: 158 IEIVGTNVATPVALPLATNGKFANPNGV--PRSGQGRGGFSGRSRGPGRGARRGRGQGRG 215
Query: 183 XXEKVSAADLDADLEKYHQEAMQ 251
EKVSA DLDADLE YH+EAMQ
Sbjct: 216 QGEKVSAEDLDADLENYHKEAMQ 238
>ref|XP_023520096.1| THO complex subunit 4A-like [Cucurbita pepo subsp. pepo]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07
Identities = 38/85 (44%), Positives = 42/85 (49%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
+EIVGTNI P A P A+G FGNPNG
Sbjct: 159 LEIVGTNIMTP-AVPASANGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRGSSRGR 217
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EK+SA DLDADLEKYH+EAMQIN
Sbjct: 218 G-EKLSAEDLDADLEKYHEEAMQIN 241
>ref|XP_016745039.1| PREDICTED: THO complex subunit 4A-like [Gossypium hirsutum]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07
Identities = 37/85 (43%), Positives = 39/85 (45%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A P A+G FG+ NG
Sbjct: 158 IEIVGTNIATPTA-PSAANGTFGSSNGAPRGGQGRGGGFSRQRGGAGGRGFGRGRGQGKG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_012472781.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gb|KJB21541.1| hypothetical protein B456_004G004300 [Gossypium raimondii]
gb|KJB21542.1| hypothetical protein B456_004G004300 [Gossypium raimondii]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07
Identities = 36/85 (42%), Positives = 38/85 (44%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVG NI PVA P A+G FGN NG
Sbjct: 158 IEIVGANISTPVA-PSAANGTFGNSNGATRGGQGRGVGFGRQRGGIGGRGSGRGHGRGRG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EK+S DLDADLEKYH EAMQ N
Sbjct: 217 RGEKISTEDLDADLEKYHSEAMQTN 241
>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gb|KJB08857.1| hypothetical protein B456_001G108500 [Gossypium raimondii]
gb|KJB08858.1| hypothetical protein B456_001G108500 [Gossypium raimondii]
gb|KJB08859.1| hypothetical protein B456_001G108500 [Gossypium raimondii]
gb|KJB08861.1| hypothetical protein B456_001G108500 [Gossypium raimondii]
gb|KJB08862.1| hypothetical protein B456_001G108500 [Gossypium raimondii]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07
Identities = 37/85 (43%), Positives = 39/85 (45%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A P A+G FG+ NG
Sbjct: 158 IEIVGTNIATPTA-PSAANGTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_016725317.1| PREDICTED: THO complex subunit 4A-like [Gossypium hirsutum]
ref|XP_017609430.1| PREDICTED: THO complex subunit 4A-like [Gossypium arboreum]
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 58.5 bits (140), Expect = 5e-07
Identities = 37/85 (43%), Positives = 39/85 (45%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A P A+G FG+ NG
Sbjct: 158 IEIVGTNIATPTA-PSAANGTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_021288953.1| THO complex subunit 4B [Herrania umbratica]
Length = 240
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/83 (40%), Positives = 38/83 (45%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ PVA PP +G F N NG+
Sbjct: 158 IEIVGTNVATPVALPPATNGKFANQNGV--PRSGQGRGGFSGRSRGPGRGARRGRGQGRG 215
Query: 183 XXEKVSAADLDADLEKYHQEAMQ 251
EKVSA DLD DLE YH+EAMQ
Sbjct: 216 QGEKVSAEDLDTDLENYHKEAMQ 238
>gb|PPD75134.1| hypothetical protein GOBAR_DD27942 [Gossypium barbadense]
Length = 241
Score = 57.8 bits (138), Expect = 9e-07
Identities = 37/85 (43%), Positives = 40/85 (47%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A P VA+ FG+ NG+
Sbjct: 158 IEIVGTNIATPAA-PTVANVAFGSSNGVPRGGRGRGGRFRRQRGVAGGRGFGRGRGQGRG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHTEAMQTN 241
>ref|XP_021278480.1| THO complex subunit 4A [Herrania umbratica]
Length = 241
Score = 57.8 bits (138), Expect = 9e-07
Identities = 37/85 (43%), Positives = 38/85 (44%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTNI P A P +G FGN NG
Sbjct: 158 IEIVGTNIATPGA-PSAGNGTFGNSNGAPRGGHGRGGGFGRQRGGGGARGVGRGRGWGKG 216
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
EKVSA DLDADLEKYH EAMQ N
Sbjct: 217 RGEKVSAEDLDADLEKYHSEAMQTN 241
>ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo
nucifera]
Length = 241
Score = 57.8 bits (138), Expect = 9e-07
Identities = 33/85 (38%), Positives = 39/85 (45%)
Frame = +3
Query: 3 IEIVGTNIEKPVAFPPVAHGMFGNPNGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
IEIVGTN+ P P +G FGNPN +
Sbjct: 161 IEIVGTNVTTPAVAPAATNGKFGNPNSVPRSGQGRGGAIGRPRGRGFGRGRGRGRGRA-- 218
Query: 183 XXEKVSAADLDADLEKYHQEAMQIN 257
E+++A DLDADLEKYH EAMQIN
Sbjct: 219 --EQITAEDLDADLEKYHSEAMQIN 241