BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00006872
         (2480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK78853.1| uncharacterized protein A4U43_C01F240 [Asparagus ...  1359   0.0  
ref|XP_020109600.1| DNA-directed RNA polymerase 3B, chloroplasti...  1342   0.0  
ref|XP_020699293.1| DNA-directed RNA polymerase 3, chloroplastic...  1332   0.0  
ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1328   0.0  
ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplasti...  1328   0.0  
ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1326   0.0  
ref|XP_018683779.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1321   0.0  
ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic...  1312   0.0  
ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1291   0.0  
ref|XP_010904634.1| PREDICTED: DNA-directed RNA polymerase 3B, c...  1283   0.0  
emb|CBI36559.3| unnamed protein product, partial [Vitis vinifera]    1277   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1277   0.0  
ref|XP_024185624.1| DNA-directed RNA polymerase 3, chloroplastic...  1258   0.0  
ref|XP_021634642.1| DNA-directed RNA polymerase 3B, chloroplasti...  1252   0.0  
ref|XP_016690333.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1252   0.0  
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1252   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1252   0.0  
ref|XP_021679239.1| DNA-directed RNA polymerase 3B, chloroplasti...  1251   0.0  
gb|PPD74699.1| hypothetical protein GOBAR_DD28392 [Gossypium bar...  1251   0.0  
ref|XP_023905982.1| DNA-directed RNA polymerase 3, chloroplastic...  1251   0.0  

>gb|ONK78853.1| uncharacterized protein A4U43_C01F240 [Asparagus officinalis]
          Length = 775

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 672/805 (83%), Positives = 722/805 (89%), Gaps = 4/805 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLRDAIEKEQR Q  RTHKAAYA HIGLLPADK++VIVMHK MGL
Sbjct: 8    PSLPYVKSLFLGWFEPLRDAIEKEQRVQRERTHKAAYAYHIGLLPADKISVIVMHKMMGL 67

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEI--- 2068
            +M GQEEGCVRVV+AAIHIGEAIEQEVKIHSFLEKTKKS+RN +VD NAV ++EQEI   
Sbjct: 68   MMMGQEEGCVRVVRAAIHIGEAIEQEVKIHSFLEKTKKSRRNKQVDENAVLTREQEIEQE 127

Query: 2067 -KRKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQS 1891
             KRK V+K+VKMK+L  V+KLLKNEN  EPWGRDAQAKLGSRLIELLI+SAFVQPP+DQS
Sbjct: 128  IKRKRVVKAVKMKRLIKVEKLLKNENGTEPWGRDAQAKLGSRLIELLIDSAFVQPPVDQS 187

Query: 1890 ACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPP 1711
            ACSPPEIRPAF+HTFKTV K+  KLK++FGVIECD LVHQGL+STARHMVIPYLPMLIPP
Sbjct: 188  ACSPPEIRPAFKHTFKTVAKDSRKLKNRFGVIECDRLVHQGLNSTARHMVIPYLPMLIPP 247

Query: 1710 KKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRV 1531
            KKWKGY++GGHL++PSYVMRTHGSKEQQ+AI+  PKKQLK+VFEALDTLGSTKWRVNRRV
Sbjct: 248  KKWKGYNEGGHLFLPSYVMRTHGSKEQQNAIRRVPKKQLKRVFEALDTLGSTKWRVNRRV 307

Query: 1530 LDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCD 1351
            L VLE MWSRGGNVAGLIDREDIP+PERP SEDLT IKEWRWNSRKAKK N+EMHAQRCD
Sbjct: 308  LVVLESMWSRGGNVAGLIDREDIPLPERPSSEDLTKIKEWRWNSRKAKKANSEMHAQRCD 367

Query: 1350 IELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG 1171
            IELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG
Sbjct: 368  IELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG 427

Query: 1170 LRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLA 991
            LRWLKIHLANIYG GVEKLSYDGRL FVENH+R+IFDSADNP++G+ WWI+AEDPFQCLA
Sbjct: 428  LRWLKIHLANIYGCGVEKLSYDGRLAFVENHLRDIFDSADNPLDGERWWIDAEDPFQCLA 487

Query: 990  ACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVY 811
            AC+NLSDALRSP PHSVISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVY
Sbjct: 488  ACINLSDALRSPWPHSVISHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVY 547

Query: 810  SGIAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQI 631
            SGIAARVLDIM+KDSQKDPAT+PTALLAKVLIDQVDRKLVKQTVMTSVYGVT+VGAREQI
Sbjct: 548  SGIAARVLDIMMKDSQKDPATNPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQI 607

Query: 630  KRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVR 451
            KRRL E+G+ITDDR+LF ASCYA KVTLN+LGEMFQAAR IMKWLGDCAKVIASENEPVR
Sbjct: 608  KRRLTEKGKITDDRLLFHASCYATKVTLNALGEMFQAARGIMKWLGDCAKVIASENEPVR 667

Query: 450  WTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMM 271
            WTTPLGLPVVQPYR SERHLIRTSLQVLALQR+G +V                       
Sbjct: 668  WTTPLGLPVVQPYRKSERHLIRTSLQVLALQRDGDAVR---------------------- 705

Query: 270  MTAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPT 91
                           VHDSFWTHACDVD MN+ILREQFVELY++P+LENLHESFQTSFPT
Sbjct: 706  ---------------VHDSFWTHACDVDSMNRILREQFVELYNIPILENLHESFQTSFPT 750

Query: 90   LAFPLLPERGNFNLREVIDSPYFFN 16
            L FP LPERG F+L EVIDSPYFFN
Sbjct: 751  LTFPSLPERGEFDLSEVIDSPYFFN 775


>ref|XP_020109600.1| DNA-directed RNA polymerase 3B, chloroplastic-like [Ananas comosus]
          Length = 976

 Score = 1342 bits (3474), Expect = 0.0
 Identities = 648/802 (80%), Positives = 725/802 (90%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLRDA+E+EQR Q ++  KAAYA HI LLPADK+AVIVMHK MGL
Sbjct: 175  PSLPYVKSLFLGWFEPLRDAVEEEQRLQRSKRQKAAYAAHIRLLPADKIAVIVMHKMMGL 234

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKS-KRNNEVDINAVFSKEQEIKR 2062
             M GQEEGCVRVVQAAIHIGEAIEQE KIHS+ +K+K+S +R N+ + N + SKE+   R
Sbjct: 235  QMMGQEEGCVRVVQAAIHIGEAIEQEFKIHSYFQKSKRSGRRKNQGEENEMVSKEEGKLR 294

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            KHV+  VKM+KL   QKL+K E   EPWGRDAQAKLGSRLIELL+ESAFVQPP  QSA S
Sbjct: 295  KHVMNLVKMRKLTEAQKLIKTEIETEPWGRDAQAKLGSRLIELLMESAFVQPPPSQSADS 354

Query: 1881 PPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
              EIRPAFRH FKTV  E+GKL++++GVIECD LVH+GLDSTARHMVIPYLPMLIPPK W
Sbjct: 355  LLEIRPAFRHAFKTVAVENGKLRNRYGVIECDPLVHKGLDSTARHMVIPYLPMLIPPKNW 414

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYDKGGHL++PSYVMRTHG+K+QQDAIKS P KQL++VFEALDTLGSTKWRVNRR+LDV
Sbjct: 415  KGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPPKQLRRVFEALDTLGSTKWRVNRRILDV 474

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +E +WS GG +AGLI+R+DIP+ ERP+SED   I+ W+W+ RKAKK NNEMHAQRCD EL
Sbjct: 475  VESIWSGGGGIAGLINRQDIPLAERPDSEDPVEIQRWKWSIRKAKKANNEMHAQRCDTEL 534

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVARKM+DEEGF+YPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGL W
Sbjct: 535  KLSVARKMRDEEGFHYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLHW 594

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKIHLANIYGGGVEKL Y+GRL FVE+H+ +IFDSA NP+ GKCWW+NAEDPFQCLAACM
Sbjct: 595  LKIHLANIYGGGVEKLCYEGRLAFVEDHLHDIFDSAANPIEGKCWWVNAEDPFQCLAACM 654

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            +LSDAL+S SPH+ +SH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYSGI
Sbjct: 655  DLSDALKSSSPHNAVSHVPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSGI 714

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            AARV+D M KDSQKDPAT+PTALLAK L+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRR
Sbjct: 715  AARVMDTMQKDSQKDPATNPTALLAKALVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 774

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITDDR+LFS+SCYAAKVTL++LGEMFQAARSIMKWL DCAKVIASEN+PVRWTT
Sbjct: 775  LEEKGLITDDRLLFSSSCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASENQPVRWTT 834

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPVVQPYRN ERHLIRTSLQVLALQR G +V+VK QKTAFPPNFVHSLDGSHMMMTA
Sbjct: 835  PLGLPVVQPYRNYERHLIRTSLQVLALQRGGQTVSVKRQKTAFPPNFVHSLDGSHMMMTA 894

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            IAC+ AGL FAGVHDSFWTHACDVDRMN+ILREQFVELY++PVLENL E FQTSFPTL F
Sbjct: 895  IACKNAGLHFAGVHDSFWTHACDVDRMNRILREQFVELYNIPVLENLLEGFQTSFPTLTF 954

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LPERG+F+L +V++SPYFFN
Sbjct: 955  PSLPERGDFDLNKVLNSPYFFN 976


>ref|XP_020699293.1| DNA-directed RNA polymerase 3, chloroplastic-like isoform X1
            [Dendrobium catenatum]
          Length = 985

 Score = 1332 bits (3446), Expect = 0.0
 Identities = 643/801 (80%), Positives = 727/801 (90%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLR AIEK+ + ++A+ HKAAYA H+ LLPADK+AVIVMHK MGL
Sbjct: 187  PSLPYVKSLFLGWFEPLRSAIEKDLKLEKAKRHKAAYAHHLSLLPADKLAVIVMHKMMGL 246

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRK 2059
            LM GQEEGCVRVVQAAIHIGEA+E EV+IH ++EKTKK  R N V  + +F+KEQ+ +RK
Sbjct: 247  LMMGQEEGCVRVVQAAIHIGEAVENEVRIHGYVEKTKK--RGNRVCQDIIFTKEQQKRRK 304

Query: 2058 HVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSP 1879
             V+K +KMKKL  VQKLLK E +MEPWGRDAQAKLG+RLIELLIESAFVQPP++QS  S 
Sbjct: 305  LVMKLIKMKKLVDVQKLLKEEIHMEPWGRDAQAKLGTRLIELLIESAFVQPPINQSGDSS 364

Query: 1878 PEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWK 1699
            P+I PAFRH  K V+ EDGKLK+K+GVIEC  LVH GL STAR MVIPYLPMLIPPKKWK
Sbjct: 365  PDILPAFRHILKAVSVEDGKLKNKYGVIECHPLVHMGLGSTARLMVIPYLPMLIPPKKWK 424

Query: 1698 GYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVL 1519
            GY+KGGHL++PSYVMRTHG+K+QQ+AIKS PK+QL KVFEALDTLGSTKWRVNRR+L+V+
Sbjct: 425  GYNKGGHLFLPSYVMRTHGAKDQQNAIKSVPKRQLNKVFEALDTLGSTKWRVNRRILEVV 484

Query: 1518 EIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELK 1339
            E +WS GG VAGL+DREDIPI E+P  ED   IK+WRWN+RKAKK NNEMHAQRCD ELK
Sbjct: 485  ETIWSEGGGVAGLVDREDIPIQEKPGLEDSMEIKKWRWNARKAKKANNEMHAQRCDTELK 544

Query: 1338 LSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWL 1159
            LSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGR LGKSGL WL
Sbjct: 545  LSVARKMQDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRQLGKSGLCWL 604

Query: 1158 KIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMN 979
            K+HLANIYGGGVEKLSYD RL FVENH+ NIFDSA NPV+GK WWI+AEDPFQCLAAC+N
Sbjct: 605  KVHLANIYGGGVEKLSYDARLTFVENHLNNIFDSAMNPVDGKRWWIHAEDPFQCLAACIN 664

Query: 978  LSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIA 799
            LSDAL S SPHS+IS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVA EKPADVYSGIA
Sbjct: 665  LSDALTSSSPHSMISYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAQEKPADVYSGIA 724

Query: 798  ARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 619
            ARV +I+ +DSQKDPA+DPTA LAK+L+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL
Sbjct: 725  ARVYEIVKQDSQKDPASDPTASLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 784

Query: 618  VERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTP 439
            +E+G+ITDDR+LF  SCYAAKVTLN+LGEMFQAARSIMKWLGDCAK+IASEN+PV WTTP
Sbjct: 785  IEKGKITDDRLLFRVSCYAAKVTLNALGEMFQAARSIMKWLGDCAKIIASENQPVTWTTP 844

Query: 438  LGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAI 259
            LGLPVVQPYRNSERHLIRTSLQVLAL+R+G  VA K QKTAFPPNFVHSLDGSHMMMTAI
Sbjct: 845  LGLPVVQPYRNSERHLIRTSLQVLALKRDGCLVAAKQQKTAFPPNFVHSLDGSHMMMTAI 904

Query: 258  ACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAFP 79
            +C+ +GL+FAGVHDSFWTHACDV+RMN+ILREQFVELY++P+LENL ESF++SFPTL FP
Sbjct: 905  SCKNSGLKFAGVHDSFWTHACDVNRMNQILREQFVELYNIPILENLLESFESSFPTLTFP 964

Query: 78   LLPERGNFNLREVIDSPYFFN 16
             LP+RG+F+LR+V++SPYFFN
Sbjct: 965  PLPDRGDFDLRKVLESPYFFN 985


>ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 894

 Score = 1328 bits (3438), Expect = 0.0
 Identities = 642/802 (80%), Positives = 719/802 (89%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P LPYVKSLFLGWFEPLRDAIEKEQ  Q+ +  KAAYA HIGLLPADKMAVIVMHK MGL
Sbjct: 93   PCLPYVKSLFLGWFEPLRDAIEKEQMLQKTKRQKAAYALHIGLLPADKMAVIVMHKMMGL 152

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKR 2062
            LMTGQEEGCVRVVQAAIHIGEAIE E KIH++LEKTK+  +R N+ + + + ++ Q   R
Sbjct: 153  LMTGQEEGCVRVVQAAIHIGEAIEHEFKIHTYLEKTKRPGRRKNQEEKDVILNQGQGNLR 212

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V K +KMKKL  VQKL+KNE  ++ WGRDAQAKLGSRLIELLIESAFVQ P  Q   S
Sbjct: 213  KKVTKLIKMKKLIEVQKLVKNEIELDSWGRDAQAKLGSRLIELLIESAFVQSPPKQLIDS 272

Query: 1881 PPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
             P+IRPAFRH+FK V KEDGKL++K+GVIECD LV +GLDSTARH+VIPYLPMLIPPK W
Sbjct: 273  LPDIRPAFRHSFKAVAKEDGKLRNKYGVIECDPLVQKGLDSTARHVVIPYLPMLIPPKNW 332

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYDKGGHL++PSYVMRTHG+K+QQDAIKS P+KQL+KVF+ALD LGSTKWRVNR +LDV
Sbjct: 333  KGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWRVNRPILDV 392

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +E +WS+GG +AGL+DR DIP+PER +SED   I++WRW  RK KK NNEMHAQRCD EL
Sbjct: 393  VEGIWSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMHAQRCDTEL 452

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGLRW
Sbjct: 453  KLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLRW 512

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKIHLAN+YGGGV KLSYDGRL FVENH+ +IFDSA NP+ G  WW+NAEDPFQCLAAC+
Sbjct: 513  LKIHLANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDPFQCLAACI 572

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            NLSDAL+S SP   ISH+PIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKP DVYSGI
Sbjct: 573  NLSDALKSSSPTEAISHIPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPGDVYSGI 632

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            AARV+DIM KDS +DP T+PTALLAK L+DQVDRKLVKQTVMTSVYGVTFVGAREQIKRR
Sbjct: 633  AARVMDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 692

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITDDR+LF+ASCYAAKVTL++LGEMFQAARSIMKWL DCAKVIASE++PVRWTT
Sbjct: 693  LEEKGLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASEDQPVRWTT 752

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPVVQPY+N ERHLIRTSLQVLALQREGHSV+VK QK+AFPPNFVHSLDGSHMMMTA
Sbjct: 753  PLGLPVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLDGSHMMMTA 812

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            I+C+ AGL FAGVHDSFWTHACDVDRMN+ILREQFVELY++P+LENL E FQTSFPTL+F
Sbjct: 813  ISCKNAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILENLLEDFQTSFPTLSF 872

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LP+RGNF+L++V+ SPYFFN
Sbjct: 873  PPLPDRGNFDLKKVLGSPYFFN 894


>ref|XP_020251395.1| DNA-directed RNA polymerase 3B, chloroplastic-like [Asparagus
            officinalis]
          Length = 989

 Score = 1328 bits (3437), Expect = 0.0
 Identities = 660/789 (83%), Positives = 712/789 (90%), Gaps = 24/789 (3%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLRDAIEKEQR Q  RTHKAAYA HIGLLPADK++VIVMHK MGL
Sbjct: 189  PSLPYVKSLFLGWFEPLRDAIEKEQRVQRERTHKAAYAYHIGLLPADKISVIVMHKMMGL 248

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEI--- 2068
            +M GQEEGCVRVV+AAIHIGEAIEQEVKIHSFLEKTKKS+RN +VD NAV ++EQEI   
Sbjct: 249  MMMGQEEGCVRVVRAAIHIGEAIEQEVKIHSFLEKTKKSRRNKQVDENAVLTREQEIEQE 308

Query: 2067 -KRKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQS 1891
             KRK V+K+VKMK+L  V+KLLKNEN  EPWGRDAQAKLGSRLIELLI+SAFVQPP+DQS
Sbjct: 309  IKRKRVVKAVKMKRLIKVEKLLKNENGTEPWGRDAQAKLGSRLIELLIDSAFVQPPVDQS 368

Query: 1890 ACSPPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPP 1711
            ACSPPEIRPAF+HTFKTV K+  KLK++FGVIECD LVHQGL+STARHMVIPYLPMLIPP
Sbjct: 369  ACSPPEIRPAFKHTFKTVAKDSRKLKNRFGVIECDRLVHQGLNSTARHMVIPYLPMLIPP 428

Query: 1710 KKWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRV 1531
            KKWKGY++GGHL++PSYVMRTHGSKEQQ+AI+  PKKQLK+VFEALDTLGSTKWRVNRRV
Sbjct: 429  KKWKGYNEGGHLFLPSYVMRTHGSKEQQNAIRRVPKKQLKRVFEALDTLGSTKWRVNRRV 488

Query: 1530 LDVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCD 1351
            L VLE MWSRGGNVAGLIDREDIP+PERP SEDLT IKEWRWNSRKAKK N+EMHAQRCD
Sbjct: 489  LVVLESMWSRGGNVAGLIDREDIPLPERPSSEDLTKIKEWRWNSRKAKKANSEMHAQRCD 548

Query: 1350 IELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG 1171
            IELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG
Sbjct: 549  IELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSG 608

Query: 1170 LRWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLA 991
            LRWLKIHLANIYG GVEKLSYDGRL FVENH+R+IFDSADNP++G+ WWI+AEDPFQCLA
Sbjct: 609  LRWLKIHLANIYGCGVEKLSYDGRLAFVENHLRDIFDSADNPLDGERWWIDAEDPFQCLA 668

Query: 990  ACMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVY 811
            AC+NLSDALRSP PHSVISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVY
Sbjct: 669  ACINLSDALRSPWPHSVISHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVY 728

Query: 810  SGIAA--------------------RVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLV 691
            SGIAA                    RVLDIM+KDSQKDPAT+PTALLAKVLIDQVDRKLV
Sbjct: 729  SGIAASGRKQKKMLRNLRARRTELPRVLDIMMKDSQKDPATNPTALLAKVLIDQVDRKLV 788

Query: 690  KQTVMTSVYGVTFVGAREQIKRRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARS 511
            KQTVMTSVYGVT+VGAREQIKRRL E+G+ITDDR+LF ASCYA KVTLN+LGEMFQAAR 
Sbjct: 789  KQTVMTSVYGVTYVGAREQIKRRLTEKGKITDDRLLFHASCYATKVTLNALGEMFQAARG 848

Query: 510  IMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVK 331
            IMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYR SERHLIRTSLQVLALQR+G +VAVK
Sbjct: 849  IMKWLGDCAKVIASENEPVRWTTPLGLPVVQPYRKSERHLIRTSLQVLALQRDGDAVAVK 908

Query: 330  HQKTAFPPNFVHSLDGSHMMMTAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVE 151
             QKTAFPPNFVHSLD     ++ I C      +  VHDSFWTHACDVD MN+ILREQFVE
Sbjct: 909  QQKTAFPPNFVHSLD-----VSVIICIIYHANYR-VHDSFWTHACDVDSMNRILREQFVE 962

Query: 150  LYDVPVLEN 124
            LY++P+LEN
Sbjct: 963  LYNIPILEN 971


>ref|XP_009400360.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 809

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 632/802 (78%), Positives = 721/802 (89%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLRD IE+EQR Q+ +  KAAYA HIGLLPADKMAVIVMHK MGL
Sbjct: 8    PSLPYVKSLFLGWFEPLRDVIEREQRLQKTKMQKAAYAPHIGLLPADKMAVIVMHKMMGL 67

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRN-NEVDINAVFSKEQEIKR 2062
            LM GQE+GC+R+VQAAI IGEAIEQE KI ++LEK+K+ +R  NE D N +   +QEI R
Sbjct: 68   LMVGQEDGCIRLVQAAIRIGEAIEQEFKIQAYLEKSKRPRRRKNEGDRNVILCTQQEILR 127

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V+K +KMKKL  VQKLL+NE  ME WGRD QAKLGSRLIELL+ESAFVQ P D  A  
Sbjct: 128  KKVMKLIKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPCDSLADC 187

Query: 1881 PPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
            PPEI PAFRHTFK ++KE+GK  +++GVIECD LVH+G DSTARHMVIPYLPMLIPPK W
Sbjct: 188  PPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLPMLIPPKSW 247

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYD GGHL++PSYVMRTHG++EQQ AIKS P+KQL+KVFEALDTLG TKWR+NRR+LDV
Sbjct: 248  KGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRINRRILDV 307

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +EI+WSRGG +AGL+DR+DI +P+RPE+EDLT IK+WRW++RKAKK N+EMHAQRCD+EL
Sbjct: 308  IEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQRCDVEL 367

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVA KM+DEEGFYYPHN+DFRGRAYPMHSHLNHLSSD+CRGILEFAEG+PLGKSGL W
Sbjct: 368  KLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLGKSGLHW 427

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKIHLANIYGGGVEKLSYD RL FV+NH+R+IFDSA+NP++G  WWI+AEDPFQCLAAC+
Sbjct: 428  LKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQCLAACI 487

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            +L+ AL+S SPH  ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYS I
Sbjct: 488  DLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEI 547

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            A RV +I+ KDS+KDP  DPTALLAKVL+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRR
Sbjct: 548  AMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 607

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITDDR+LF ASCYAAKVTLN+LGEMF+AAR IMKWLGDCAK+IASENEPV+WTT
Sbjct: 608  LEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASENEPVKWTT 667

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPVVQPYRNSERH IRTSLQVL LQREG SV+VK QKTAFPPN+VHSLDGSHMMMTA
Sbjct: 668  PLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSVSVKRQKTAFPPNYVHSLDGSHMMMTA 727

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            I+C+ AGL FAGVHDSFWTHACDVDRMN+ILRE+FV LY++P+LENL + FQTSFPTL F
Sbjct: 728  ISCKNAGLHFAGVHDSFWTHACDVDRMNQILREEFVALYNIPILENLLDGFQTSFPTLTF 787

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LP+RG+F+L++V++SPYFFN
Sbjct: 788  PPLPDRGDFDLKKVLESPYFFN 809


>ref|XP_018683779.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Musa acuminata subsp. malaccensis]
          Length = 810

 Score = 1321 bits (3419), Expect = 0.0
 Identities = 632/803 (78%), Positives = 721/803 (89%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVKSLFLGWFEPLRD IE+EQR Q+ +  KAAYA HIGLLPADKMAVIVMHK MGL
Sbjct: 8    PSLPYVKSLFLGWFEPLRDVIEREQRLQKTKMQKAAYAPHIGLLPADKMAVIVMHKMMGL 67

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRN-NEVDINAVFSKEQEIKR 2062
            LM GQE+GC+R+VQAAI IGEAIEQE KI ++LEK+K+ +R  NE D N +   +QEI R
Sbjct: 68   LMVGQEDGCIRLVQAAIRIGEAIEQEFKIQAYLEKSKRPRRRKNEGDRNVILCTQQEILR 127

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V+K +KMKKL  VQKLL+NE  ME WGRD QAKLGSRLIELL+ESAFVQ P D  A  
Sbjct: 128  KKVMKLIKMKKLIEVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPCDSLADC 187

Query: 1881 PPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
            PPEI PAFRHTFK ++KE+GK  +++GVIECD LVH+G DSTARHMVIPYLPMLIPPK W
Sbjct: 188  PPEILPAFRHTFKNISKENGKSINRYGVIECDPLVHKGFDSTARHMVIPYLPMLIPPKSW 247

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYD GGHL++PSYVMRTHG++EQQ AIKS P+KQL+KVFEALDTLG TKWR+NRR+LDV
Sbjct: 248  KGYDNGGHLFLPSYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRINRRILDV 307

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +EI+WSRGG +AGL+DR+DI +P+RPE+EDLT IK+WRW++RKAKK N+EMHAQRCD+EL
Sbjct: 308  IEIVWSRGGGIAGLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQRCDVEL 367

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVA KM+DEEGFYYPHN+DFRGRAYPMHSHLNHLSSD+CRGILEFAEG+PLGKSGL W
Sbjct: 368  KLSVAHKMRDEEGFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLGKSGLHW 427

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKIHLANIYGGGVEKLSYD RL FV+NH+R+IFDSA+NP++G  WWI+AEDPFQCLAAC+
Sbjct: 428  LKIHLANIYGGGVEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQCLAACI 487

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            +L+ AL+S SPH  ISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAGEKPADVYS I
Sbjct: 488  DLTKALKSSSPHMAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEI 547

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            A RV +I+ KDS+KDP  DPTALLAKVL+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRR
Sbjct: 548  AMRVREIIRKDSEKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRR 607

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITDDR+LF ASCYAAKVTLN+LGEMF+AAR IMKWLGDCAK+IASENEPV+WTT
Sbjct: 608  LEEKGLITDDRLLFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASENEPVKWTT 667

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHS-VAVKHQKTAFPPNFVHSLDGSHMMMT 265
            PLGLPVVQPYRNSERH IRTSLQVL LQREG S V+VK QKTAFPPN+VHSLDGSHMMMT
Sbjct: 668  PLGLPVVQPYRNSERHQIRTSLQVLTLQREGQSQVSVKRQKTAFPPNYVHSLDGSHMMMT 727

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            AI+C+ AGL FAGVHDSFWTHACDVDRMN+ILRE+FV LY++P+LENL + FQTSFPTL 
Sbjct: 728  AISCKNAGLHFAGVHDSFWTHACDVDRMNQILREEFVALYNIPILENLLDGFQTSFPTLT 787

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LP+RG+F+L++V++SPYFFN
Sbjct: 788  FPPLPDRGDFDLKKVLESPYFFN 810


>ref|XP_020597755.1| DNA-directed RNA polymerase 3, chloroplastic-like [Phalaenopsis
            equestris]
          Length = 985

 Score = 1312 bits (3396), Expect = 0.0
 Identities = 628/801 (78%), Positives = 719/801 (89%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVKSLFLGWFEPLR AIEK+ + ++ + HKAAYA H+ LLPADK+AVIVMHK MGL
Sbjct: 187  PNLPYVKSLFLGWFEPLRSAIEKDVKLEKGKRHKAAYAHHLSLLPADKLAVIVMHKMMGL 246

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRK 2059
            LM G EEGCVRVVQAAIHIGEAIE EV+I  ++EK+K+  R N V  + + +KEQ+ ++K
Sbjct: 247  LMMGPEEGCVRVVQAAIHIGEAIEHEVRIQCYVEKSKR--RRNRVCPDIISTKEQQKRQK 304

Query: 2058 HVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSP 1879
             V+K +KMK+L  VQKLLK E +MEPWGRDAQAKLG+RLI+LLIESAFVQPP+DQ     
Sbjct: 305  LVMKFIKMKRLVEVQKLLKEEIDMEPWGRDAQAKLGTRLIKLLIESAFVQPPIDQFGDHS 364

Query: 1878 PEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKWK 1699
            P+I PAF H  KTV+ EDGKLK+K+GV+EC  LVH GL STAR MVIPY+PMLIPPKKWK
Sbjct: 365  PDILPAFMHKLKTVSVEDGKLKNKYGVVECHALVHMGLGSTARLMVIPYMPMLIPPKKWK 424

Query: 1698 GYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDVL 1519
            GY+KGGHL++PSYVMRTHG+KEQQ+AIKS PK+QL KVFEALDTLGSTKWRVNRR+L+++
Sbjct: 425  GYNKGGHLFLPSYVMRTHGAKEQQNAIKSVPKRQLNKVFEALDTLGSTKWRVNRRILEIV 484

Query: 1518 EIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIELK 1339
            E +W++GG +AGL+ RED+PIPE+P  ED   IK+WRWN+RKA+K NNEMHAQRCD ELK
Sbjct: 485  ESIWNQGGGIAGLVGREDVPIPEKPGLEDSMEIKKWRWNARKARKANNEMHAQRCDTELK 544

Query: 1338 LSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRWL 1159
            LSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGL WL
Sbjct: 545  LSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLYWL 604

Query: 1158 KIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACMN 979
            KIHLANI+GGGVEKLSYD RL FVENH+ NIFDSA NPV+GK WWINAEDPFQCLAAC+N
Sbjct: 605  KIHLANIFGGGVEKLSYDARLTFVENHLHNIFDSAMNPVDGKRWWINAEDPFQCLAACIN 664

Query: 978  LSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGIA 799
            LSDAL S SPHSVIS+LPIHQDGSCNGLQHYAALGRD LEA AVNLVA E+PADVYSGIA
Sbjct: 665  LSDALTSSSPHSVISYLPIHQDGSCNGLQHYAALGRDCLEATAVNLVAQERPADVYSGIA 724

Query: 798  ARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 619
            ARV +I+ +DSQKDP  DPTALLAK+L+DQVDRKLVKQTVMTSVYGVT+VGAREQIKRRL
Sbjct: 725  ARVYEIVKEDSQKDPTNDPTALLAKILLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 784

Query: 618  VERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTTP 439
            +E+G+ITD+R+LF  SCYAAKVTLN+LGEMFQAARSIMKWLGDCAK+IASEN+PVRWTTP
Sbjct: 785  IEKGKITDERLLFRVSCYAAKVTLNALGEMFQAARSIMKWLGDCAKIIASENQPVRWTTP 844

Query: 438  LGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTAI 259
            LGLPV+QPYRN ERHLIRTSLQVLAL+R+G  VA K QKTAFPPNFVHSLDGSHMMMTAI
Sbjct: 845  LGLPVIQPYRNFERHLIRTSLQVLALKRDGCLVAAKQQKTAFPPNFVHSLDGSHMMMTAI 904

Query: 258  ACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAFP 79
            +CR +GL FAGVHDSFWTHACDVDRMN+ILRE+FVELY++P+LENL ESF+TSFPTL FP
Sbjct: 905  SCRNSGLNFAGVHDSFWTHACDVDRMNQILREEFVELYNIPILENLLESFETSFPTLTFP 964

Query: 78   LLPERGNFNLREVIDSPYFFN 16
             LP+RGNF+L++V++SPYFFN
Sbjct: 965  PLPQRGNFDLQKVLESPYFFN 985


>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score = 1291 bits (3340), Expect = 0.0
 Identities = 627/804 (77%), Positives = 713/804 (88%), Gaps = 3/804 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVKSLFLGWFEPLR+AIEKEQ+ QE++  KAAYA +IGLLPADKMAVIVMHK MGL
Sbjct: 153  PNLPYVKSLFLGWFEPLREAIEKEQKLQESKKQKAAYAPYIGLLPADKMAVIVMHKMMGL 212

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINA--VFSKEQEIK 2065
            LMTGQEEG VRVVQAA+HIGEAIEQEV+IH+FL+KTKK +   +++       +KEQ+I 
Sbjct: 213  LMTGQEEGYVRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGGKKIEGQGDDKVTKEQDIL 272

Query: 2064 RKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSAC 1885
            RK V   VK KKL  VQKL+KNEN + PWGRDAQAKLGSRLIELL E+A+VQPP++Q   
Sbjct: 273  RKRVNILVKKKKLIEVQKLVKNENEIRPWGRDAQAKLGSRLIELLTETAYVQPPINQLGD 332

Query: 1884 SPPEIRPAFRHTFKTVTKEDGKLKSK-FGVIECDTLVHQGLDSTARHMVIPYLPMLIPPK 1708
            SP EIRPAFRHTF+T++KE G+   K +GVIECD LV +GLD TARHMVIPY+PMLIPPK
Sbjct: 333  SPREIRPAFRHTFRTLSKETGRRVGKRYGVIECDPLVGRGLDRTARHMVIPYVPMLIPPK 392

Query: 1707 KWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVL 1528
            KWKGYDKGGHL++PSYVMRTHG+K QQDAIK+ P KQ++KVFEALDTLG TKWRVNR+VL
Sbjct: 393  KWKGYDKGGHLFLPSYVMRTHGAKRQQDAIKNVPGKQMQKVFEALDTLGRTKWRVNRKVL 452

Query: 1527 DVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDI 1348
             V+E +W+RGGN+AGL+DREDIPIPE+P+SEDL  +++W+WN RK KK N E HAQRCDI
Sbjct: 453  GVVESIWARGGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTKKINRERHAQRCDI 512

Query: 1347 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGL 1168
            ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGK+GL
Sbjct: 513  ELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKAGL 572

Query: 1167 RWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAA 988
            RWLKIHLAN+Y GGV+KLSYD RL+FVENH+ +IFDSAD P++G  WW+NAEDPFQCLAA
Sbjct: 573  RWLKIHLANLYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRWWLNAEDPFQCLAA 632

Query: 987  CMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 808
            C+NLS+AL+S SPH+ ISHLPIHQDGSCNGLQHYAALGR  LEAAAVNLVAGEKPADVYS
Sbjct: 633  CINLSEALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAVNLVAGEKPADVYS 692

Query: 807  GIAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 628
             IAARV  IM  D++KDP TDPTALLAKVLIDQVDRKLVKQTVMTSVYGVT+VGAREQIK
Sbjct: 693  EIAARVHSIMKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQIK 752

Query: 627  RRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRW 448
            RRL E+G IT+DR+LFSA+CYAAKVTL +L EMFQAARSIM WL DCAKVIASEN+PVRW
Sbjct: 753  RRLEEKGHITNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDCAKVIASENQPVRW 812

Query: 447  TTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMM 268
            TTPLGLPVVQPY   +RHL+RTSLQVLALQREG  V VK Q+TAFPPNFVHSLDGSHMMM
Sbjct: 813  TTPLGLPVVQPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPPNFVHSLDGSHMMM 872

Query: 267  TAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTL 88
            TA+ACR AGL FAGVHDSFWTHACDVDRMN+ILRE+FVELYD+P+LE L ESFQ SFP L
Sbjct: 873  TAVACRDAGLHFAGVHDSFWTHACDVDRMNQILREKFVELYDMPILERLLESFQVSFPLL 932

Query: 87   AFPLLPERGNFNLREVIDSPYFFN 16
             FP LP+RG+F+L+EV++SPYFFN
Sbjct: 933  TFPPLPDRGDFDLKEVLESPYFFN 956


>ref|XP_010904634.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
            [Elaeis guineensis]
          Length = 877

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 626/802 (78%), Positives = 702/802 (87%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P LPYVKSLFLGWFEPLRDAIEKEQ  Q+ +  KAAYA HIGLLPADKMAVIVMHK MGL
Sbjct: 93   PCLPYVKSLFLGWFEPLRDAIEKEQMLQKTKRQKAAYALHIGLLPADKMAVIVMHKMMGL 152

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKK-SKRNNEVDINAVFSKEQEIKR 2062
            LMTGQEEGCVRVVQAAIHIGEAIE E KIH++LEKTK+  +R N+ + + + ++ Q   R
Sbjct: 153  LMTGQEEGCVRVVQAAIHIGEAIEHEFKIHTYLEKTKRPGRRKNQEEKDVILNQGQGNLR 212

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V K +KMKKL  VQKL+KNE  ++ WGRDAQAKLGSRLIELLIESAFVQ P  Q   S
Sbjct: 213  KKVTKLIKMKKLIEVQKLVKNEIELDSWGRDAQAKLGSRLIELLIESAFVQSPPKQLIDS 272

Query: 1881 PPEIRPAFRHTFKTVTKEDGKLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
             P+IRPAFRH+FK V KEDGKL++K+GVIECD LV +GLDSTARH+VIPYLPMLIPPK W
Sbjct: 273  LPDIRPAFRHSFKAVAKEDGKLRNKYGVIECDPLVQKGLDSTARHVVIPYLPMLIPPKNW 332

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYDKGGHL++PSYVMRTHG+K+QQDAIKS P+KQL+KVF+ALD LGSTKWRVNR +LDV
Sbjct: 333  KGYDKGGHLFLPSYVMRTHGAKDQQDAIKSVPRKQLQKVFKALDILGSTKWRVNRPILDV 392

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +E +WS+GG +AGL+DR DIP+PER +SED   I++WRW  RK KK NNEMHAQRCD EL
Sbjct: 393  VEGIWSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVKKANNEMHAQRCDTEL 452

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVARKM+DEEGFYYPHNLDFRGRAYPMHSHLNHLSSD+CRGILEFAEGRPLGKSGLRW
Sbjct: 453  KLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGILEFAEGRPLGKSGLRW 512

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKIHLAN+YGGGV KLSYDGRL FVENH+ +IFDSA NP+ G  WW+NAEDPFQCLAAC+
Sbjct: 513  LKIHLANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRWWLNAEDPFQCLAACI 572

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            NLSDAL+S SP   ISH+PIHQ                 LEAAAVNLVAGEKP DVYSGI
Sbjct: 573  NLSDALKSSSPTEAISHIPIHQ-----------------LEAAAVNLVAGEKPGDVYSGI 615

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            AARV+DIM KDS +DP T+PTALLAK L+DQVDRKLVKQTVMTSVYGVTFVGAREQIKRR
Sbjct: 616  AARVMDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 675

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITDDR+LF+ASCYAAKVTL++LGEMFQAARSIMKWL DCAKVIASE++PVRWTT
Sbjct: 676  LEEKGLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADCAKVIASEDQPVRWTT 735

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPVVQPY+N ERHLIRTSLQVLALQREGHSV+VK QK+AFPPNFVHSLDGSHMMMTA
Sbjct: 736  PLGLPVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPPNFVHSLDGSHMMMTA 795

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            I+C+ AGL FAGVHDSFWTHACDVDRMN+ILREQFVELY++P+LENL E FQTSFPTL+F
Sbjct: 796  ISCKNAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILENLLEDFQTSFPTLSF 855

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LP+RGNF+L++V+ SPYFFN
Sbjct: 856  PPLPDRGNFDLKKVLGSPYFFN 877


>emb|CBI36559.3| unnamed protein product, partial [Vitis vinifera]
          Length = 808

 Score = 1277 bits (3305), Expect = 0.0
 Identities = 614/802 (76%), Positives = 711/802 (88%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVK+LFLGWFEPLR+AI+KEQRAQ  +  KAAYA HI LLPADKMAVIVMHK MGL
Sbjct: 8    PNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGL 67

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRK 2059
            +M G EEGCVRVVQAA+ IG AIEQEV+IHSFLEKTK  +R+  V  +    +E+EI RK
Sbjct: 68   VMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLREKEILRK 127

Query: 2058 HVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSP 1879
             V   ++ KK+  VQKL+KNE  + PWGRD QAKLGSRLIELL E+A+VQ P++QSA  P
Sbjct: 128  RVKSFIRKKKIIEVQKLVKNEE-ITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCP 186

Query: 1878 PEIRPAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
            P++RPAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+PMLIPPKKW
Sbjct: 187  PDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKW 246

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYDKGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKWR+NRRVL V
Sbjct: 247  KGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSV 306

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +E +W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E H+ RCD E+
Sbjct: 307  VESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEI 366

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRW
Sbjct: 367  KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRW 426

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKI LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AEDPFQCLAAC+
Sbjct: 427  LKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACI 486

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGEKPADVYS I
Sbjct: 487  NLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEI 546

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            AARV +IM +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++GAREQIKRR
Sbjct: 547  AARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 606

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIASEN+PV+WTT
Sbjct: 607  LAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTT 666

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSLDGSHMMMTA
Sbjct: 667  PLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTA 726

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            +ACR AGL FAGVHDSFWTHACDVD+MN+ILRE+FVELY +P+LENL ESFQTS PTL F
Sbjct: 727  VACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTF 786

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LP+RGNF+LREV++SPYFFN
Sbjct: 787  PPLPDRGNFDLREVLESPYFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1277 bits (3305), Expect = 0.0
 Identities = 614/802 (76%), Positives = 711/802 (88%), Gaps = 1/802 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVK+LFLGWFEPLR+AI+KEQRAQ  +  KAAYA HI LLPADKMAVIVMHK MGL
Sbjct: 179  PNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGL 238

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIKRK 2059
            +M G EEGCVRVVQAA+ IG AIEQEV+IHSFLEKTK  +R+  V  +    +E+EI RK
Sbjct: 239  VMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLREKEILRK 298

Query: 2058 HVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACSP 1879
             V   ++ KK+  VQKL+KNE  + PWGRD QAKLGSRLIELL E+A+VQ P++QSA  P
Sbjct: 299  RVKSFIRKKKIIEVQKLVKNEE-ITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCP 357

Query: 1878 PEIRPAFRHTFKTVTKEDGKLK-SKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKKW 1702
            P++RPAFRHTFKTVTKE G+    K+GVIECD LV  GLD TA+HMVIPY+PMLIPPKKW
Sbjct: 358  PDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKW 417

Query: 1701 KGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLDV 1522
            KGYDKGG+L++PSYVMRTHGS++QQDA+KS P++QL+KVFEALDTLG+TKWR+NRRVL V
Sbjct: 418  KGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSV 477

Query: 1521 LEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIEL 1342
            +E +W+RGGN+ GL+DRE++P+PE+P +EDLT I+ W+WN+RKAKK N E H+ RCD E+
Sbjct: 478  VESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEI 537

Query: 1341 KLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLRW 1162
            KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLRW
Sbjct: 538  KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRW 597

Query: 1161 LKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAACM 982
            LKI LAN+Y GGVEKLSYDGRL FV+NH+ ++FDSADNP+NG  WW+ AEDPFQCLAAC+
Sbjct: 598  LKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACI 657

Query: 981  NLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSGI 802
            NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGR++LEA+AVNLVAGEKPADVYS I
Sbjct: 658  NLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEI 717

Query: 801  AARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRR 622
            AARV +IM +DS KDPATDP ALLAKVLI QVDRKLVKQTVMTSVYGVT++GAREQIKRR
Sbjct: 718  AARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 777

Query: 621  LVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWTT 442
            L E+G ITD+R+LF+A+CYAAKVTL +LGE+FQAAR IM WLG+CAKVIASEN+PV+WTT
Sbjct: 778  LAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTT 837

Query: 441  PLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMTA 262
            PLGLPV+QPY  SERHLIRTSLQVLALQREG  V ++ Q+TAFPPNFVHSLDGSHMMMTA
Sbjct: 838  PLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTA 897

Query: 261  IACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLAF 82
            +ACR AGL FAGVHDSFWTHACDVD+MN+ILRE+FVELY +P+LENL ESFQTS PTL F
Sbjct: 898  VACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTF 957

Query: 81   PLLPERGNFNLREVIDSPYFFN 16
            P LP+RGNF+LREV++SPYFFN
Sbjct: 958  PPLPDRGNFDLREVLESPYFFN 979


>ref|XP_024185624.1| DNA-directed RNA polymerase 3, chloroplastic [Rosa chinensis]
 gb|PRQ46078.1| putative DNA-directed RNA polymerase [Rosa chinensis]
          Length = 984

 Score = 1258 bits (3254), Expect = 0.0
 Identities = 604/803 (75%), Positives = 699/803 (87%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVK+LFLGWFEPLR+AI KEQ+AQ+ + HKAA+A HI LLPADKMA+IVMHK MGL
Sbjct: 183  PSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKAAFAPHIDLLPADKMALIVMHKLMGL 242

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAV-FSKEQEIKR 2062
            +M G ++GCV+VVQAA+HIG AIEQEV+IHSFLEKTK  +R      +    SKE+EI R
Sbjct: 243  VMMGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKSLQRKKSAAADEDGLSKEKEILR 302

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V   ++ K+L  VQKLLK E+ M+PWGRD QAKLGSRLIELL E+A VQPPLDQ A  
Sbjct: 303  KRVNGLIRRKRLVEVQKLLKKED-MKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADG 361

Query: 1881 PPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKK 1705
            PP++RPAFRH  K   K  G KL   +GVIECD LV  GLD TA+HM+IPY+PML+PPK+
Sbjct: 362  PPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKR 421

Query: 1704 WKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLD 1525
            WKGYDKGGHL++PSYVMRTHGS++Q D +++ P +Q++KVFEALD LGSTKWR+N++VL+
Sbjct: 422  WKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNIPGRQMQKVFEALDMLGSTKWRINKKVLN 481

Query: 1524 VLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIE 1345
            V+E +W+RGGN+AGL+DRED+P+PE+P SEDLT I+EWRW++RKAKK N E H+QRCD E
Sbjct: 482  VVESIWARGGNIAGLVDREDVPVPEKPPSEDLTEIQEWRWSARKAKKLNQERHSQRCDTE 541

Query: 1344 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLR 1165
            LKLSVAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLR
Sbjct: 542  LKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLR 601

Query: 1164 WLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAAC 985
            WLKIHLAN+Y GGVEKLSYDGR+ FV+NHI +IFDSA NPVNG  WW+ AEDP QCLAAC
Sbjct: 602  WLKIHLANLYSGGVEKLSYDGRIAFVDNHIDDIFDSATNPVNGNHWWLTAEDPLQCLAAC 661

Query: 984  MNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSG 805
            +NLS+AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 
Sbjct: 662  INLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSE 721

Query: 804  IAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 625
            IA RV DIM +DS KDP T P ALLA+VL+DQ+DRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 722  IAVRVHDIMKRDSNKDPTTSPNALLARVLVDQIDRKLVKQTVMTSVYGVTYVGAREQIKR 781

Query: 624  RLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWT 445
            RL E+G ITDDR+LF+A+CYAAKVTL +LGE+FQAAR IM WLGDCAKVIASEN+PVRWT
Sbjct: 782  RLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWT 841

Query: 444  TPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMT 265
            TPLGLPVVQPY  SERHLIRTSLQVLALQRE + V V+ Q+TAFPPNFVHSLDGSHMMMT
Sbjct: 842  TPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMT 901

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            A+ACR A ++FAGVHDSFWTHACDVD+MN+ILRE FVELY  P+LENL +SFQ ++P L 
Sbjct: 902  ALACRDASIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLKSFQAAYPELT 961

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LPERG+F+L+EV+ SPYFFN
Sbjct: 962  FPPLPERGDFDLQEVLKSPYFFN 984


>ref|XP_021634642.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X2 [Manihot
            esculenta]
 gb|OAY31446.1| hypothetical protein MANES_14G112700 [Manihot esculenta]
          Length = 992

 Score = 1252 bits (3240), Expect = 0.0
 Identities = 597/803 (74%), Positives = 701/803 (87%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVK LFLGWFEPL++AI+KEQ  Q ++  KAA+A HI LLPADKMAVIVMHK MGL
Sbjct: 191  PNLPYVKGLFLGWFEPLKEAIKKEQNLQRSKKQKAAFAPHIELLPADKMAVIVMHKMMGL 250

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKR 2062
            LM G E+GC+ VVQAA+ IG A+EQEV+IH+FLEKTK  +RN +  D      +E+EI R
Sbjct: 251  LMVGHEDGCIPVVQAAVKIGMAVEQEVRIHNFLEKTKNFQRNKKTTDAQQNLGREKEILR 310

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V   ++ K+L  VQKL+KNE  M+PWGRD QAKLGS L+ELL E+AFVQPP++QSA S
Sbjct: 311  KRVNNLIRRKRLTEVQKLVKNEE-MKPWGRDTQAKLGSCLVELLTETAFVQPPVNQSADS 369

Query: 1881 PPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKK 1705
            PP++RPAFRH FKT+T   G K+  K+GVIECD L+  GLD +  HM+IPY PML+PPKK
Sbjct: 370  PPDVRPAFRHRFKTITNNPGQKIGKKYGVIECDPLILSGLDGSVNHMLIPYFPMLVPPKK 429

Query: 1704 WKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLD 1525
            WKGYDKGGH ++PSY+MRTHGS++QQDA++  P K ++KV+EALDTLG+TKWRVNRRVL+
Sbjct: 430  WKGYDKGGHFFLPSYIMRTHGSRKQQDALRRVPAKNMQKVYEALDTLGNTKWRVNRRVLN 489

Query: 1524 VLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIE 1345
            V+E +W+RGGNVAGL+DR DIP+PE+P SEDLT I++WRW+ RKAKK N E H+QRCD E
Sbjct: 490  VVESIWARGGNVAGLVDRADIPVPEKPLSEDLTEIQQWRWSMRKAKKINRERHSQRCDTE 549

Query: 1344 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLR 1165
            LKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRGILEFAEGRPLGKSGL 
Sbjct: 550  LKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRPLGKSGLH 609

Query: 1164 WLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAAC 985
            WLKIHLAN+Y GGVEKLS++GRL FVENH+ +IFDSA+NPV+G+CWW+ AEDPFQCLAAC
Sbjct: 610  WLKIHLANLYSGGVEKLSHEGRLAFVENHLDDIFDSAENPVHGQCWWLTAEDPFQCLAAC 669

Query: 984  MNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSG 805
            +NLS+AL+S SPH+VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNLVAGEKPADVY+ 
Sbjct: 670  INLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVYTE 729

Query: 804  IAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 625
            IA RV +++ +DS KDPAT+P A+LAK+LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 730  IALRVHELIKRDSSKDPATNPNAILAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 789

Query: 624  RLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWT 445
            RL E+G ITDDR+LFSA+CY AKVT+ +LGE+FQAAR IM WLGDCAKVIASE++PVRWT
Sbjct: 790  RLEEKGHITDDRLLFSAACYTAKVTMTALGELFQAARDIMNWLGDCAKVIASEDQPVRWT 849

Query: 444  TPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMT 265
            TPLGLPV+QPY  SERHLIRTSLQVLALQREG SV V+ Q+TAFPPNFVHSLDGSHMMMT
Sbjct: 850  TPLGLPVLQPYYKSERHLIRTSLQVLALQREGSSVEVRKQRTAFPPNFVHSLDGSHMMMT 909

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            A+ACR A L+FAGVHDSFWTHA DVD MN+ILRE+FVELY  P+LENL E+FQTS+PTL 
Sbjct: 910  AVACRDADLRFAGVHDSFWTHASDVDLMNRILREKFVELYSTPILENLLENFQTSYPTLK 969

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LPERGNF+L+EV+ SPYFFN
Sbjct: 970  FPPLPERGNFDLQEVLRSPYFFN 992


>ref|XP_016690333.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like isoform
            X1 [Gossypium hirsutum]
          Length = 972

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 604/804 (75%), Positives = 704/804 (87%), Gaps = 3/804 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAM 2245
            P+LPYVK LFLGWFEPLR+AI KEQ+ Q+ +  K  AAYA HI LLPADK+AVIVMHK M
Sbjct: 170  PNLPYVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMM 229

Query: 2244 GLLMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIK 2065
            GL+M  +E+G V+VVQAA+HIG AIEQEV+IHSFLEKTK  +R   VD     SKE+EI 
Sbjct: 230  GLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGASKEKEIL 289

Query: 2064 RKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSAC 1885
            RK V   ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  
Sbjct: 290  RKRVNSLIRRRRLTEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGD 348

Query: 1884 SPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPK 1708
            SP ++RPAFRH FKT+++  G K+K ++GVIECD L+  GLD +A+HM+IPY+PML+PPK
Sbjct: 349  SPLDVRPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPK 408

Query: 1707 KWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVL 1528
            KWKGYDKGG+L++PSYVMRTHGS++QQ+A+K    K ++KVFEALDTLGSTKWRVN +VL
Sbjct: 409  KWKGYDKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVL 468

Query: 1527 DVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDI 1348
             V+E +W+ GGN+AGL+DR DIPIPE+P SED T I+EW+W+ RKA K N E H+QRCD 
Sbjct: 469  AVVESIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDT 528

Query: 1347 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGL 1168
            ELKLSVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL
Sbjct: 529  ELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGL 588

Query: 1167 RWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAA 988
             WLKIHLAN+Y GGVEKLS+DGRL FV+NH+  IFDSA+NP+NG  WW+ AEDPFQCLAA
Sbjct: 589  HWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAA 648

Query: 987  CMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 808
            CMNLS+AL+S SPHS+IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVYS
Sbjct: 649  CMNLSEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYS 708

Query: 807  GIAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 628
             IA RV +IM +DS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIK
Sbjct: 709  EIAVRVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 768

Query: 627  RRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRW 448
            RRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PVRW
Sbjct: 769  RRLEEKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRW 828

Query: 447  TTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMM 268
            TTPLGLPVVQPY  SERHLIRT+LQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMM
Sbjct: 829  TTPLGLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMM 888

Query: 267  TAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTL 88
            TA+ACR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ESF+TS+PTL
Sbjct: 889  TAVACRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTL 948

Query: 87   AFPLLPERGNFNLREVIDSPYFFN 16
             FP LPERGNF+LREV+ SPYFFN
Sbjct: 949  VFPPLPERGNFDLREVLKSPYFFN 972


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii]
 gb|KJB53873.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 604/804 (75%), Positives = 704/804 (87%), Gaps = 3/804 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAM 2245
            P+LPYVK LFLGWFEPLR+AI KEQ+ Q+ +  K  AAYA HI LLPADK+AVIVMHK M
Sbjct: 170  PNLPYVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMM 229

Query: 2244 GLLMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIK 2065
            GL+M  +E+G V+VVQAA+HIG AIEQEV+IHSFLEKTK  +R   VD     SKE+EI 
Sbjct: 230  GLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGASKEKEIL 289

Query: 2064 RKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSAC 1885
            RK V   ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  
Sbjct: 290  RKRVNSLIRRRRLTEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGD 348

Query: 1884 SPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPK 1708
            SP ++RPAFRH FKT+++  G K+K ++GVIECD L+  GLD +A+HM+IPY+PML+PPK
Sbjct: 349  SPLDVRPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPK 408

Query: 1707 KWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVL 1528
            KWKGYDKGG+L++PSYVMRTHGS++QQ+A+K    K ++KVFEALDTLGSTKWRVN +VL
Sbjct: 409  KWKGYDKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVL 468

Query: 1527 DVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDI 1348
             V+E +W+ GGN+AGL+DR DIPIPE+P SED T I+EW+W+ RKA K N E H+QRCD 
Sbjct: 469  AVVESIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDT 528

Query: 1347 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGL 1168
            ELKLSVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL
Sbjct: 529  ELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGL 588

Query: 1167 RWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAA 988
             WLKIHLAN+Y GGVEKLS+DGRL FV+NH+  IFDSA+NP+NG  WW+ AEDPFQCLAA
Sbjct: 589  HWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAA 648

Query: 987  CMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 808
            CMNLS+AL+S SPHS+IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVYS
Sbjct: 649  CMNLSEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYS 708

Query: 807  GIAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 628
             IA RV +IM +DS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIK
Sbjct: 709  EIAVRVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 768

Query: 627  RRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRW 448
            RRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PVRW
Sbjct: 769  RRLEEKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRW 828

Query: 447  TTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMM 268
            TTPLGLPVVQPY  SERHLIRT+LQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMM
Sbjct: 829  TTPLGLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMM 888

Query: 267  TAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTL 88
            TA+ACR AGL FAGVHDSFWTHACDV++MN+ILRE+FVELY +PVLENL ESF+TS+PTL
Sbjct: 889  TAVACRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTL 948

Query: 87   AFPLLPERGNFNLREVIDSPYFFN 16
             FP LPERGNF+LREV+ SPYFFN
Sbjct: 949  VFPPLPERGNFDLREVLKSPYFFN 972


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 602/803 (74%), Positives = 699/803 (87%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            PSLPYVK+LFLGWFEPLR+AI KEQ+AQ+ + HK A+A HI LLPADKMA+IVMHK MGL
Sbjct: 172  PSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGL 231

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNN-EVDINAVFSKEQEIKR 2062
            +M G ++GCV+VVQAA+HIG AIEQEV+IHSFLEK+K  +R    V      SKE+EI R
Sbjct: 232  VMMGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILR 291

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V   ++ K+L  VQKLLK E+ M+PWGRD QAKLGSRLIELL E+A VQPPLDQ A  
Sbjct: 292  KRVNGLIRRKRLVEVQKLLKKED-MKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADG 350

Query: 1881 PPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKK 1705
            PP++RPAFRH  K   K  G KL   +GVIECD LV  GLD TA+HM+IPY+PML+PPK+
Sbjct: 351  PPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKR 410

Query: 1704 WKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLD 1525
            WKGYDKGGHL++PSYVMRTHGS++Q D +++   +Q++KVFEALD LGSTKWR+N++VL+
Sbjct: 411  WKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLN 470

Query: 1524 VLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIE 1345
            V+E +W+RGGN+AGL+DRED+P+PE+P SED T I+EWRW++RKAKK N E H+QRCD E
Sbjct: 471  VVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTE 530

Query: 1344 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLR 1165
            LKLSVAR+MKDE+GFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLGKSGLR
Sbjct: 531  LKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLR 590

Query: 1164 WLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAAC 985
            WLKIHLAN+Y GGVEKLSYDGR++FV+NHI +IFDSA NPVNG  WW+ AEDP QCLAAC
Sbjct: 591  WLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAAC 650

Query: 984  MNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSG 805
            +NLS+AL SPSPH+VISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 
Sbjct: 651  INLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSE 710

Query: 804  IAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 625
            IA RV DIM +DS KDP T+P ALLAKVL++Q+DRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 711  IAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKR 770

Query: 624  RLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWT 445
            RL E+G ITDDR+LF+A+CYAAKVTL +LGE+FQAAR IM WLGDCAKVIASEN+PVRWT
Sbjct: 771  RLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWT 830

Query: 444  TPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMT 265
            TPLGLPVVQPY  SERHLIRTSLQVLALQRE + V V+ Q+TAFPPNFVHSLDGSHMMMT
Sbjct: 831  TPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMT 890

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            A+ACR AG++FAGVHDSFWTHACDVD+MN+ILRE FVELY  P+LENL ESFQ ++P L 
Sbjct: 891  ALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESFQAAYPELT 950

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LPERG+F+L+EV+ SPYFFN
Sbjct: 951  FPPLPERGDFDLQEVLKSPYFFN 973


>ref|XP_021679239.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X1 [Hevea
            brasiliensis]
 ref|XP_021679240.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X2 [Hevea
            brasiliensis]
          Length = 994

 Score = 1251 bits (3238), Expect = 0.0
 Identities = 597/803 (74%), Positives = 701/803 (87%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVK LFLGWFEPL++AI+KEQ  Q ++  KAA+A HI LLPADKMAVIVMHK MGL
Sbjct: 193  PNLPYVKGLFLGWFEPLKEAIKKEQNLQRSKKQKAAFAPHIELLPADKMAVIVMHKLMGL 252

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKR 2062
            +M G E+GCV VVQAA+ IG A+EQEV+IH+FLEKTK  +R   + D      +E+EI R
Sbjct: 253  VMVGHEDGCVPVVQAAVQIGMAVEQEVRIHNFLEKTKNFQRKKTITDAQQSLGREKEILR 312

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V   +  K+L  VQKLLKNE  M+ WGRD QAKLGSRL+ELL E+AFVQPP++QSA  
Sbjct: 313  KRVNNLIGRKRLIEVQKLLKNEE-MKHWGRDTQAKLGSRLVELLTETAFVQPPVNQSADI 371

Query: 1881 PPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKK 1705
            PP++RPAFRH F+T+T   G K+  K+GVIECD L+  GL+ +A+HM+IPY PML+PPKK
Sbjct: 372  PPDVRPAFRHRFRTITNNPGHKIVKKYGVIECDPLILTGLEGSAKHMLIPYFPMLVPPKK 431

Query: 1704 WKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLD 1525
            WKGYDKGGH ++PSY+MRTHGS++QQDA++S P K ++KVFEALD LG+TKWRVNRRVLD
Sbjct: 432  WKGYDKGGHFFLPSYIMRTHGSRKQQDALRSVPGKNMRKVFEALDMLGNTKWRVNRRVLD 491

Query: 1524 VLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIE 1345
             +E +W+RGGN+AGL+DREDIPIPE+P SEDL  I++WRW+ RKAKK N E H+QRCD E
Sbjct: 492  AVESIWARGGNIAGLVDREDIPIPEKPLSEDLREIQQWRWSMRKAKKINRERHSQRCDTE 551

Query: 1344 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLR 1165
            LKLSVA+K+KDEEGFYYPHNLDFRGRAYPMH HL HLSSD+CRGILEFAEGRPLGKSGLR
Sbjct: 552  LKLSVAQKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDICRGILEFAEGRPLGKSGLR 611

Query: 1164 WLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAAC 985
            WLKIHLAN+Y GGVEKLS++GRL FVENH+ +IFDSA+NPV+GKCWW+ AEDPFQCLAAC
Sbjct: 612  WLKIHLANLYSGGVEKLSHEGRLAFVENHLDDIFDSAENPVHGKCWWLTAEDPFQCLAAC 671

Query: 984  MNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSG 805
            +NLS+AL+S SPH+VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNLVAGEKPADVY+ 
Sbjct: 672  VNLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVYTE 731

Query: 804  IAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 625
            IA RV +I+ +DS+KDP T+P A+LA +LIDQVDRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 732  IAVRVHEIIKRDSRKDPTTNPNAILANLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 791

Query: 624  RLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWT 445
            RL E+G ITDDR+LFSA+CY AKVT+ +LGE+FQAAR IM WLGDCAKVIA E++PVRWT
Sbjct: 792  RLEEKGHITDDRLLFSAACYTAKVTMTALGELFQAARDIMNWLGDCAKVIALEDQPVRWT 851

Query: 444  TPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMT 265
            TPLGLPVVQPY  SERHLIRTSLQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMMT
Sbjct: 852  TPLGLPVVQPYYKSERHLIRTSLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMT 911

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            A+ACR A L+FAGVHDSFWTHACDVD MN+ILRE+FVELY +P+LENL E+FQTS+PTL 
Sbjct: 912  AVACRDADLRFAGVHDSFWTHACDVDLMNQILREKFVELYSMPILENLLENFQTSYPTLK 971

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LPERGNF+L+EV+ SPYFFN
Sbjct: 972  FPPLPERGNFDLQEVLRSPYFFN 994


>gb|PPD74699.1| hypothetical protein GOBAR_DD28392 [Gossypium barbadense]
          Length = 856

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 604/804 (75%), Positives = 703/804 (87%), Gaps = 3/804 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHK--AAYARHIGLLPADKMAVIVMHKAM 2245
            P+LPYVK LFLGWFEPLR+AI KEQ+ Q+ +  K  AAYA HI LLPADK+AVIVMHK M
Sbjct: 54   PNLPYVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMM 113

Query: 2244 GLLMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEVDINAVFSKEQEIK 2065
            GL+M  +E+G V+VVQAA+HIG AIEQEV+IHSFLEKTK  +R   VD     SKE+EI 
Sbjct: 114  GLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQIVDEVQGASKEKEIL 173

Query: 2064 RKHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSAC 1885
            RK V   ++ ++L  VQKL+KNE  ++PWGRDAQAKLGSRL+ELL E+A+VQPP+DQS  
Sbjct: 174  RKRVNSLIRRRRLTEVQKLVKNEE-IKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGD 232

Query: 1884 SPPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPK 1708
            SP ++RPAFRH FKT+++  G K+K ++GVIECD L+  GLD +A+HM+IPY+PML+PPK
Sbjct: 233  SPLDVRPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPK 292

Query: 1707 KWKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVL 1528
            KWKGYDKGG+L++PSYVMRTHGS++QQ+A+K    K ++KVFEALDTLGSTKWRVN +VL
Sbjct: 293  KWKGYDKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVL 352

Query: 1527 DVLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDI 1348
             V+E +W+ GGN+AGL+DR DIPIPE+P SED T I+EW+W+ RKA K N E H+QRCD 
Sbjct: 353  AVVESIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDT 412

Query: 1347 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGL 1168
            ELKLSVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRG+LEFAEGRPLG+SGL
Sbjct: 413  ELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGL 472

Query: 1167 RWLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAA 988
             WLKIHLAN+Y GGVEKLS+DGRL FV+NH+  IFDSA+NP+NG  WW+ AEDPFQCLAA
Sbjct: 473  HWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAA 532

Query: 987  CMNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYS 808
            CMNLS+AL+S SPHS+IS+LPIHQDGSCNGLQHYAALGRD LEAAAVNLVAGEKPADVYS
Sbjct: 533  CMNLSEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYS 592

Query: 807  GIAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 628
             IA RV +IM +DS KDPAT+P ALLAK+LIDQVDRKLVKQTVMTSVYGVTFVGAREQIK
Sbjct: 593  EIAVRVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIK 652

Query: 627  RRLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRW 448
            RRL E+G ITDDR+LFSA+CY AKVTL +LGE+FQAAR+IM WLGDCAKVIASEN+PVRW
Sbjct: 653  RRLEEKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRW 712

Query: 447  TTPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMM 268
            TTPLGLPVVQPY  SERHLIRT+LQVLALQREG+SV V+ Q+TAFPPNFVHSLDGSHMMM
Sbjct: 713  TTPLGLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMM 772

Query: 267  TAIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTL 88
            TA+ACR AGL FAGVHDSFWTHACDV++MN ILRE+FVELY +PVLENL ESF+TS+PTL
Sbjct: 773  TAVACRDAGLYFAGVHDSFWTHACDVEKMNLILREKFVELYSMPVLENLLESFETSYPTL 832

Query: 87   AFPLLPERGNFNLREVIDSPYFFN 16
             FP LPERGNF+LREV+ SPYFFN
Sbjct: 833  VFPPLPERGNFDLREVLKSPYFFN 856


>ref|XP_023905982.1| DNA-directed RNA polymerase 3, chloroplastic [Quercus suber]
          Length = 982

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 608/803 (75%), Positives = 698/803 (86%), Gaps = 2/803 (0%)
 Frame = -3

Query: 2418 PSLPYVKSLFLGWFEPLRDAIEKEQRAQEARTHKAAYARHIGLLPADKMAVIVMHKAMGL 2239
            P+LPYVK+LFLGWFEPLRDAIEKEQ+ Q  + HKAA+A HI LLPADKMAVIVMHK MGL
Sbjct: 181  PTLPYVKALFLGWFEPLRDAIEKEQKMQRTKKHKAAFAPHIDLLPADKMAVIVMHKMMGL 240

Query: 2238 LMTGQEEGCVRVVQAAIHIGEAIEQEVKIHSFLEKTKKSKRNNEV-DINAVFSKEQEIKR 2062
             M G +EG V+VVQAAI +G AIEQEV+IHSFLEKTK S+    V DI     KE++I R
Sbjct: 241  FMMGNQEGYVQVVQAAIQVGVAIEQEVRIHSFLEKTKHSQSKKIVADIEDGLHKEKQILR 300

Query: 2061 KHVLKSVKMKKLAAVQKLLKNENNMEPWGRDAQAKLGSRLIELLIESAFVQPPLDQSACS 1882
            K V   ++ +KL   QKLLK E   +PWGRD QAKLGSRLIELL E+A+VQPPL+QSA  
Sbjct: 301  KRVNSLIRKRKLKEAQKLLKKEE-FKPWGRDTQAKLGSRLIELLTETAYVQPPLNQSADG 359

Query: 1881 PPEIRPAFRHTFKTVTKEDG-KLKSKFGVIECDTLVHQGLDSTARHMVIPYLPMLIPPKK 1705
            PP+IRPAFRH FK VTK  G K+   +G+IECD L+  GLD TA+H +IPY+PML+PPKK
Sbjct: 360  PPDIRPAFRHKFKPVTKNSGRKIVKNYGIIECDPLILMGLDKTAKHALIPYVPMLVPPKK 419

Query: 1704 WKGYDKGGHLYMPSYVMRTHGSKEQQDAIKSTPKKQLKKVFEALDTLGSTKWRVNRRVLD 1525
            WKGYDKGGHL++PSYVMRTHGS++QQDA+K+ P +Q++KVFEALD LG+TKWRVNRRV  
Sbjct: 420  WKGYDKGGHLFLPSYVMRTHGSRKQQDAVKNVPVRQMQKVFEALDMLGNTKWRVNRRVFS 479

Query: 1524 VLEIMWSRGGNVAGLIDREDIPIPERPESEDLTVIKEWRWNSRKAKKGNNEMHAQRCDIE 1345
            V+E +W+RGGN+AGL+D ED+PIPE+P SEDLT I+EW+W+ RKAKK N E H+QRCDIE
Sbjct: 480  VVESIWARGGNIAGLVDCEDVPIPEKPSSEDLTEIQEWKWSWRKAKKINLERHSQRCDIE 539

Query: 1344 LKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDVCRGILEFAEGRPLGKSGLR 1165
            LKLSVAR M DEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRGILEFAEGRPLGKSGL 
Sbjct: 540  LKLSVARTMIDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLH 599

Query: 1164 WLKIHLANIYGGGVEKLSYDGRLNFVENHIRNIFDSADNPVNGKCWWINAEDPFQCLAAC 985
            WLKIHLAN+Y GGVEKLS+DGRL FV+NH+ +IFDSADNPVNG  WW+ AEDPFQ LAAC
Sbjct: 600  WLKIHLANLYSGGVEKLSHDGRLAFVDNHLDDIFDSADNPVNGNQWWLTAEDPFQFLAAC 659

Query: 984  MNLSDALRSPSPHSVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSG 805
            +NLS+ALRS SPH+VISHLPIHQDGSCNGLQHYAALGRD++EAAAVNL AG+KPADVYS 
Sbjct: 660  INLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLTAGDKPADVYSE 719

Query: 804  IAARVLDIMIKDSQKDPATDPTALLAKVLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKR 625
            IA RV DIM +DS KDPAT+P ALLAKVLIDQVDRKLVKQTVMTSVYGVT+VGAREQIKR
Sbjct: 720  IAVRVHDIMKRDSNKDPATNPHALLAKVLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKR 779

Query: 624  RLVERGQITDDRMLFSASCYAAKVTLNSLGEMFQAARSIMKWLGDCAKVIASENEPVRWT 445
            RL E+G ITDDR+LF+A+CY AKVTL +LGE+F+AAR IM WLGDCAKVIASEN+PVRWT
Sbjct: 780  RLEEKGLITDDRLLFTAACYGAKVTLAALGEIFEAARGIMGWLGDCAKVIASENQPVRWT 839

Query: 444  TPLGLPVVQPYRNSERHLIRTSLQVLALQREGHSVAVKHQKTAFPPNFVHSLDGSHMMMT 265
            TPLGLPVVQPY  SERHLIRTSLQ+LALQREG+ V V+ Q+TAFPPNFVHSLDG+HMMMT
Sbjct: 840  TPLGLPVVQPYCRSERHLIRTSLQILALQREGNMVDVRKQRTAFPPNFVHSLDGTHMMMT 899

Query: 264  AIACRKAGLQFAGVHDSFWTHACDVDRMNKILREQFVELYDVPVLENLHESFQTSFPTLA 85
            A+ACR AGL+FAGVHDSFWTHA DVD+MN+ILRE+FVELY  P+LENL ESFQTS+P L 
Sbjct: 900  AVACRDAGLRFAGVHDSFWTHASDVDKMNQILREKFVELYSRPILENLLESFQTSYPELM 959

Query: 84   FPLLPERGNFNLREVIDSPYFFN 16
            FP LPERG+F+LR+V++SPYFFN
Sbjct: 960  FPPLPERGDFDLRKVLESPYFFN 982