BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00006775
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   223   1e-64
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   223   2e-64
gb|AQY61302.1| Pol [Vitis vinifera]                                   219   2e-63
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]   219   3e-63
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]   219   3e-63
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]   216   2e-62
gb|KYP58720.1| Retrovirus-related Pol polyprotein from transposo...   206   3e-62
gb|KYP54388.1| Retrovirus-related Pol polyprotein from transposo...   200   6e-62
gb|KYP55492.1| Retrovirus-related Pol polyprotein from transposo...   199   8e-62
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]   205   2e-60
gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposo...   206   2e-59
gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinen...   205   3e-59
emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]   203   2e-58
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]      204   3e-58
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                204   3e-58
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...   202   4e-58
gb|AEJ07957.1| polyprotein [Sorghum propinquum]                       194   2e-57
gb|AQY61297.1| Pol [Coffea canephora]                                 202   2e-57
gb|AQY61295.1| Pol [Coffea arabica]                                   202   3e-57
gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]              198   4e-57

>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  223 bits (568), Expect = 1e-64
 Identities = 108/155 (69%), Positives = 123/155 (79%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ +GF IIAVYVDDLN++GT   
Sbjct: 1107 LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEE 1166

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH  +G+L+HQS Y  KVLKRF MDKA PLS+
Sbjct: 1167 LTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSS 1226

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+ DPFRPCE DEE+LGPEVPYLSAIG
Sbjct: 1227 PMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIG 1261


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score =  223 bits (567), Expect = 2e-64
 Identities = 108/155 (69%), Positives = 123/155 (79%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ +GF IIAVYVDDLN++GT   
Sbjct: 1112 LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEE 1171

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH  +G+L+HQS Y  KVLKRF MDKA PLS+
Sbjct: 1172 LTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSS 1231

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+ DPFRPCE DEE+LGPEVPYLSAIG
Sbjct: 1232 PMVVRSLDVKKDPFRPCEXDEELLGPEVPYLSAIG 1266


>gb|AQY61302.1| Pol [Vitis vinifera]
          Length = 1223

 Score =  219 bits (559), Expect = 2e-63
 Identities = 107/155 (69%), Positives = 122/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ +GF IIAVYVDDLN++GT   
Sbjct: 834  LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEE 893

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH  +G+L+HQS Y  KVLKRF MDKA  LS+
Sbjct: 894  LTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHHLSS 953

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+ DPFRPCE DEE+LGPEVPYLSAIG
Sbjct: 954  PMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIG 988


>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
          Length = 1306

 Score =  219 bits (557), Expect = 3e-63
 Identities = 106/155 (68%), Positives = 122/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ + F IIAVYVDDLN++GT   
Sbjct: 991  LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETRFAIIAVYVDDLNLVGTPEE 1050

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH  +G+L+HQS Y  KVLKRF MDKA PLS+
Sbjct: 1051 LTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSS 1110

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+ DPFRPCE DEE+LGPEVPYL+AIG
Sbjct: 1111 PMVVRSLDVKKDPFRPCEKDEELLGPEVPYLNAIG 1145


>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
          Length = 1360

 Score =  219 bits (557), Expect = 3e-63
 Identities = 106/155 (68%), Positives = 121/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ +GF IIAVYVDDLN++GT   
Sbjct: 971  LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPED 1030

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQ EH  +G+L+HQS Y  KVLKRF MDK  PLS+
Sbjct: 1031 LTRTTNYLKKEFEMKDLGKTKFCLGLQNEHFPNGVLVHQSTYIKKVLKRFYMDKVHPLSS 1090

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+ DPFRPCE DEE+LGPEVPYLSAIG
Sbjct: 1091 PMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIG 1125


>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
          Length = 1383

 Score =  216 bits (551), Expect = 2e-62
 Identities = 106/155 (68%), Positives = 121/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LY LKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ +GF II VYVDDLN++GT   
Sbjct: 1035 LYELKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIVVYVDDLNLVGTPEE 1094

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+ +GLQIEH  +G+L+HQS Y  KVLKRF MDKA PLS+
Sbjct: 1095 LTRTTNYLKNEFEMKDLGKTKFYLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSS 1154

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+V+NDPFRPCE DEE+LGPEVPYLSAIG
Sbjct: 1155 PMVVRSLDVKNDPFRPCEKDEELLGPEVPYLSAIG 1189


>gb|KYP58720.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 428

 Score =  206 bits (524), Expect = 3e-62
 Identities = 100/155 (64%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLL+EGY N+PICPC+FIK++ +GF II VYVDD+NIIGT   
Sbjct: 44  LYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSENGFAIIVVYVDDINIIGTPEE 103

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              TK+C+GLQ+E++++GIL+HQ  Y  KVLKRF MDK+ PL T
Sbjct: 104 LSKAIDCLKKEFEMKDLGRTKFCLGLQVEYLENGILVHQEAYITKVLKRFYMDKSHPLCT 163

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMVVRSL+V  DPFRP E DEE+LGPEVPYLSAIG
Sbjct: 164 PMVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIG 198


>gb|KYP54388.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 256

 Score =  200 bits (508), Expect = 6e-62
 Identities = 98/155 (63%), Positives = 116/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLL+EGY N+PICPC+FIK++ +GF II VYVDD+NIIGT   
Sbjct: 44  LYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSENGFAIIVVYVDDINIIGTLEE 103

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                               K+CIGLQ+E++++GIL+HQ  Y  KVLKRF MDK+ PL T
Sbjct: 104 LSKAIDCLKKEFEMKDLGRKKFCIGLQVEYLENGILVHQETYITKVLKRFYMDKSHPLCT 163

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           P+VVRSL+V  DPFRP E DEE+LGPEV YLSAIG
Sbjct: 164 PIVVRSLDVNKDPFRPQEKDEEILGPEVLYLSAIG 198


>gb|KYP55492.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 229

 Score =  199 bits (505), Expect = 8e-62
 Identities = 98/155 (63%), Positives = 116/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLL+EGY N+PICPC+FIK++ +GF II VYVDD+NIIGT   
Sbjct: 44  LYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQNGFAIIVVYVDDINIIGTLEE 103

Query: 181 XXXXXXXXXXXXXE-----TKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              TK+C+GLQ+E++++GIL+HQ  Y  KVLKRF MDK+ PL T
Sbjct: 104 LSKAIDCLKKEFEMKDLGMTKFCLGLQVEYLENGILVHQEAYITKVLKRFYMDKSHPLCT 163

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            MVVRSL+V  DPFRP E DEE+LGPEV YLSAIG
Sbjct: 164 RMVVRSLDVNKDPFRPQEKDEEILGPEVSYLSAIG 198


>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
          Length = 570

 Score =  205 bits (521), Expect = 2e-60
 Identities = 102/155 (65%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPC+FIKK+ + F IIAVYVDDLN++GT   
Sbjct: 296 LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETRFVIIAVYVDDLNLVGTPKE 355

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                             +TK+C+GLQIE+  +G+L+HQS Y  KVLKRF MDKA PLS+
Sbjct: 356 LIRITNYLNKEFEMKDLGKTKFCLGLQIEYFPNGVLVHQSTYIKKVLKRFYMDKAHPLSS 415

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMVVRSL+V+ D F PCE DEE+LG EV YLSAIG
Sbjct: 416 PMVVRSLDVKKDSFHPCEKDEELLGHEVLYLSAIG 450


>gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 814

 Score =  206 bits (524), Expect = 2e-59
 Identities = 100/155 (64%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLL+EGY N+PICPC+FIK++ +GF II VYVDD+NIIGT   
Sbjct: 430 LYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQNGFAIIVVYVDDINIIGTPKE 489

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              TK+C+GLQ+E++++GIL+HQ  Y  KVLKRF MDK+ PL T
Sbjct: 490 LSKAIDCLKKEFEMKDLGRTKFCLGLQVEYLENGILVHQEAYITKVLKRFYMDKSHPLCT 549

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMVVRSL+V  DPFRP E DEE+LGPEVPYLSAIG
Sbjct: 550 PMVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIG 584


>gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 797

 Score =  205 bits (522), Expect = 3e-59
 Identities = 99/155 (63%), Positives = 116/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYL+  GYVNN +CPCVFIKKT+SGF I+AVYVDD+N+IGT   
Sbjct: 405 LYGLKQSGRMWYNRLSEYLIGMGYVNNELCPCVFIKKTSSGFVIVAVYVDDMNLIGTPEE 464

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              T YC+GL++EH   GILLHQSNY  K+L+RFN DKA P ST
Sbjct: 465 IKETAKHLKSEFEMKDLGRTNYCLGLELEHRADGILLHQSNYIQKMLRRFNEDKAKPSST 524

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMV+RSL+ + DPFRP +N+EE+L PEVPYLSAIG
Sbjct: 525 PMVIRSLDPKKDPFRPADNNEEILAPEVPYLSAIG 559


>emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]
          Length = 805

 Score =  203 bits (516), Expect = 2e-58
 Identities = 100/154 (64%), Positives = 116/154 (75%), Gaps = 5/154 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LY LKQ G MWYNRLSEYLLKEGYVNNPICPC+FIKK+ + F IIAVYVDDLN++GT   
Sbjct: 416 LYVLKQPGHMWYNRLSEYLLKEGYVNNPICPCIFIKKSETEFAIIAVYVDDLNLVGTSEE 475

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                             +TK+C+ LQIEH  +G+L+HQS    KVLKRF MDKA PLS+
Sbjct: 476 LTRTTNYLKKEFEXKDLGKTKFCLXLQIEHFPNGVLVHQSTXIKKVLKRFYMDKAHPLSS 535

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAI 447
           P+VVRSL+V+ DPFRPCE DEE+LGPEVPYLSAI
Sbjct: 536 PIVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAI 569


>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
          Length = 1190

 Score =  204 bits (520), Expect = 3e-58
 Identities = 97/155 (62%), Positives = 121/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYN LSE+LLK+GYV N ICPC+FIKK+++GF II+VYVDD+NIIGT   
Sbjct: 798  LYGLKQSGRMWYNHLSEFLLKKGYVKNDICPCIFIKKSSNGFCIISVYVDDMNIIGTNKD 857

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH+ +GI +HQ+NY NK+L++F MDK+ PLST
Sbjct: 858  IIEACSYLKAEFEMKDLGKTKFCLGLQIEHLPNGIFIHQANYVNKLLEKFYMDKSHPLST 917

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL  + DPFRP E++E++LGPEVPYLSAIG
Sbjct: 918  PMVVRSLEADKDPFRPKEDNEDILGPEVPYLSAIG 952


>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  204 bits (520), Expect = 3e-58
 Identities = 97/155 (62%), Positives = 121/155 (78%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYN LSE+LLK+GYV N ICPC+FIKK+++GF II+VYVDD+NIIGT   
Sbjct: 798  LYGLKQSGRMWYNHLSEFLLKKGYVKNDICPCIFIKKSSNGFCIISVYVDDMNIIGTNKD 857

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH+ +GI +HQ+NY NK+L++F MDK+ PLST
Sbjct: 858  IIEACSYLKAEFEMKDLGKTKFCLGLQIEHLPNGIFIHQANYVNKLLEKFYMDKSHPLST 917

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL  + DPFRP E++E++LGPEVPYLSAIG
Sbjct: 918  PMVVRSLEADKDPFRPKEDNEDILGPEVPYLSAIG 952


>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score =  202 bits (514), Expect = 4e-58
 Identities = 101/155 (65%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSEYLLK+GY N+ ICPC+FIK+  S F IIAVYVDDLNIIGT   
Sbjct: 523 LYGLKQSGRMWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFVIIAVYVDDLNIIGTRKE 582

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                             +TK+C+GLQIE++ +GIL+HQS YT K+LKRF MD + PLST
Sbjct: 583 LLEAVECLKREFEMKDLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLST 642

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMVVRSL++  DPFRP ENDEE+LG E PYLSAIG
Sbjct: 643 PMVVRSLDINTDPFRPQENDEELLGDETPYLSAIG 677


>gb|AEJ07957.1| polyprotein [Sorghum propinquum]
          Length = 429

 Score =  194 bits (492), Expect = 2e-57
 Identities = 93/155 (60%), Positives = 115/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRLSE+L ++GY NN  CPCVFIKK+++GF II+VYVDDLNIIG    
Sbjct: 44  LYGLKQSGRMWYNRLSEFLKQKGYTNNDDCPCVFIKKSSTGFCIISVYVDDLNIIGNGSD 103

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                             +TK+C+GLQ+EH+ SGI ++QS Y  K+L++FNMDK+ P  T
Sbjct: 104 IDEARHHLKTEFEMKDLGQTKFCLGLQLEHLPSGIFVYQSTYVQKILEKFNMDKSYPTKT 163

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
           PMVVRSL+V+ DPFRP E +EE+LGP  PYLSAIG
Sbjct: 164 PMVVRSLDVDKDPFRPREENEEILGPHFPYLSAIG 198


>gb|AQY61297.1| Pol [Coffea canephora]
          Length = 1045

 Score =  202 bits (513), Expect = 2e-57
 Identities = 102/155 (65%), Positives = 115/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRL+E L KEGY N+PICPCVFIKK  S F IIAVYVDDLN+IGT   
Sbjct: 665  LYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVFIKKNGSNFVIIAVYVDDLNLIGTPEE 724

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH++ GI +HQ+ YT KVLKRF MDKA  LST
Sbjct: 725  IQNSVEYLKKEFEIKDFGKTKFCLGLQIEHLKGGIFVHQTAYTRKVLKRFYMDKAHTLST 784

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+   DPFRP E +EE+LGPEVPYLSAIG
Sbjct: 785  PMVVRSLDPNKDPFRPREENEEILGPEVPYLSAIG 819


>gb|AQY61295.1| Pol [Coffea arabica]
          Length = 1160

 Score =  202 bits (513), Expect = 3e-57
 Identities = 102/155 (65%), Positives = 115/155 (74%), Gaps = 5/155 (3%)
 Frame = +1

Query: 1    LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
            LYGLKQSGRMWYNRL+E L KEGY N+PICPCVFIKK  S F IIAVYVDDLN+IGT   
Sbjct: 780  LYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVFIKKNGSNFVIIAVYVDDLNLIGTLEE 839

Query: 181  XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              +TK+C+GLQIEH++ GI +HQ+ YT KVLKRF MDKA  LST
Sbjct: 840  IQNSVEYLKKEFEIKDFGKTKFCLGLQIEHLKGGIFVHQTAYTRKVLKRFYMDKAHTLST 899

Query: 346  PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAIG 450
            PMVVRSL+   DPFRP E +EE+LGPEVPYLSAIG
Sbjct: 900  PMVVRSLDPNKDPFRPREENEEILGPEVPYLSAIG 934


>gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]
          Length = 692

 Score =  198 bits (504), Expect = 4e-57
 Identities = 99/154 (64%), Positives = 115/154 (74%), Gaps = 5/154 (3%)
 Frame = +1

Query: 1   LYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCVFIKKTTSGFNIIAVYVDDLNIIGTXXX 180
           LYGLKQSGRMWYNRL+EYL K G+ N+ ICPCVFIKKTTSGF IIAVYVDDLNIIGT   
Sbjct: 378 LYGLKQSGRMWYNRLTEYLAKNGFKNDDICPCVFIKKTTSGFIIIAVYVDDLNIIGTPEE 437

Query: 181 XXXXXXXXXXXXX-----ETKYCIGLQIEHMQSGILLHQSNYTNKVLKRFNMDKATPLST 345
                              TK+C  LQIEH ++GI +HQ+ YT K+LKRF MDK+ PLST
Sbjct: 438 IPTIIKTLKEEFEMKDLGRTKFCFDLQIEHTKNGIFIHQATYTEKILKRFYMDKSHPLST 497

Query: 346 PMVVRSLNVENDPFRPCENDEEVLGPEVPYLSAI 447
           PM+VRSL++END FRP E +E++LGPEV YLSAI
Sbjct: 498 PMIVRSLDMENDQFRPKEENEDILGPEVLYLSAI 531