BLASTX nr result

ID: Ophiopogon26_contig00006429 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00006429
         (645 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244029.1| pentatricopeptide repeat-containing protein ...    58   3e-06

>ref|XP_020244029.1| pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Asparagus officinalis]
 ref|XP_020244030.1| pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Asparagus officinalis]
 gb|ONK59991.1| uncharacterized protein A4U43_C08F13060 [Asparagus officinalis]
          Length = 471

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/49 (61%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   KKSCYREALQVLDEMLNQSISPDSTLWEALVVGRRSSQLRT-VDLDMII 144
           +K    EAL+VL+EML++SI PD+TLWEAL+VG RS+QLRT VD ++I+
Sbjct: 421 RKDRLSEALRVLNEMLDRSIFPDATLWEALLVGYRSNQLRTPVDFNIIL 469


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