BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00006331
         (781 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY73253.1| Small nuclear ribonucleoprotein-associated protei...    50   2e-11
ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-a...    61   2e-07
ref|XP_009398995.2| PREDICTED: LOW QUALITY PROTEIN: small nuclea...    59   2e-06
ref|XP_010449168.1| PREDICTED: small nuclear ribonucleoprotein-a...    57   9e-06
ref|XP_010439573.1| PREDICTED: small nuclear ribonucleoprotein-a...    57   9e-06
ref|XP_019703020.1| PREDICTED: small nuclear ribonucleoprotein-a...    57   9e-06

>gb|OAY73253.1| Small nuclear ribonucleoprotein-associated protein B' [Ananas
           comosus]
          Length = 323

 Score = 49.7 bits (117), Expect(2) = 2e-11
 Identities = 29/57 (50%), Positives = 29/57 (50%)
 Frame = +3

Query: 219 PAGPGPARTFRPCPRRRWAGAWHDAAPDLASPGPQRRSPAGELPACHAASHAWVPWS 389
           P  PGPAR  RP PRRR     HDAAPDL  P      PA  LPA  AA     P S
Sbjct: 120 PPRPGPARPRRPRPRRRRPRPGHDAAPDLPPPRAPALRPARRLPAGRAAPAPGYPAS 176



 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 23/39 (58%), Positives = 24/39 (61%)
 Frame = +1

Query: 43  GEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH 159
           GEERE+               SMTVEGPPPPDDSRAKAH
Sbjct: 61  GEEREERRTLGLVLLRGEEVVSMTVEGPPPPDDSRAKAH 99


>ref|XP_009397707.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B-like [Musa acuminata subsp. malaccensis]
          Length = 268

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 39/90 (43%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +1

Query: 43  GEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH-XXXXXXXXXXXXXXXXXXXX 219
           GEERED               SMTVEGPPPPD+SRAKAH                     
Sbjct: 66  GEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAHAAAALAGPGVGRAAGRGIPTA 125

Query: 220 XLVQAQPGLSXXXXXXXXXXXXMMQPQISR 309
            LVQAQPGL+            MMQPQISR
Sbjct: 126 PLVQAQPGLAGPVRGVGGPAPGMMQPQISR 155


>ref|XP_009398995.2| PREDICTED: LOW QUALITY PROTEIN: small nuclear
           ribonucleoprotein-associated protein B-like [Musa
           acuminata subsp. malaccensis]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/89 (43%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +1

Query: 43  GEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH-XXXXXXXXXXXXXXXXXXXX 219
           GEERED               SMTVEGPPPPD SRAKAH                     
Sbjct: 64  GEEREDRRTLALXRLRGEEVVSMTVEGPPPPDQSRAKAHEAAALAGAGVRRAAGCRIPTV 123

Query: 220 XLVQAQPGLSXXXXXXXXXXXXMMQPQIS 306
            LVQAQPGL+            MMQPQIS
Sbjct: 124 PLVQAQPGLARPVRGVGGHAPGMMQPQIS 152


>ref|XP_010449168.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
           and B'-like [Camelina sativa]
          Length = 261

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 38/89 (42%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 46  EEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXXXXXXXXX 222
           EERED               SMTVEGPPPPD+SRAKA                       
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 223 LVQAQPGLSXXXXXXXXXXXXMMQPQISR 309
           LVQAQPGLS            MMQPQISR
Sbjct: 121 LVQAQPGLSGPVRGVGGPSPGMMQPQISR 149


>ref|XP_010439573.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
           and B' [Camelina sativa]
          Length = 261

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 38/89 (42%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 46  EEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKA-HXXXXXXXXXXXXXXXXXXXXX 222
           EERED               SMTVEGPPPPD+SRAKA                       
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 223 LVQAQPGLSXXXXXXXXXXXXMMQPQISR 309
           LVQAQPGLS            MMQPQISR
Sbjct: 121 LVQAQPGLSGPVRGVGGPSPGMMQPQISR 149


>ref|XP_019703020.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B-like [Elaeis guineensis]
          Length = 262

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 36/91 (39%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +1

Query: 43  GEEREDXXXXXXXXXXXXXXXSMTVEGPPPPDDSRAKAH--XXXXXXXXXXXXXXXXXXX 216
           GEERED               SMTVEGPPPPD+SRAKA                      
Sbjct: 58  GEEREDRRTLGLVLLRGEEVVSMTVEGPPPPDESRAKAQAAAAALAGPGLGRAAGRGVPT 117

Query: 217 XXLVQAQPGLSXXXXXXXXXXXXMMQPQISR 309
             L+QAQPGL+            MMQPQ+SR
Sbjct: 118 APLIQAQPGLAGPVRGVGGPAPGMMQPQLSR 148