BLASTX nr result

ID: Ophiopogon26_contig00005894 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00005894
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275608.1| RNA polymerase II C-terminal domain phosphat...    69   9e-11
ref|XP_020264821.1| RNA polymerase II C-terminal domain phosphat...    67   4e-10

>ref|XP_020275608.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Asparagus
           officinalis]
 gb|ONK63902.1| uncharacterized protein A4U43_C07F20100 [Asparagus officinalis]
          Length = 458

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = +3

Query: 270 MSLVAESPVHSSSSNDDFXXXXXXXXXXVSPDTSDEDQDNVEEEDGFLEQRAKRHKMEDL 449
           MSL AESP H+ SS+DDF           S  + DED +NV+EED FLE+ AKR K+EDL
Sbjct: 1   MSLAAESPPHTPSSSDDFAAFLDAELESGSETSPDEDHENVKEEDEFLERNAKRRKVEDL 60

Query: 450 EVTEEL 467
           E T+EL
Sbjct: 61  ESTKEL 66


>ref|XP_020264821.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Asparagus
           officinalis]
 ref|XP_020264823.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Asparagus
           officinalis]
 gb|ONK69721.1| uncharacterized protein A4U43_C05F26030 [Asparagus officinalis]
          Length = 465

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
 Frame = +3

Query: 270 MSLVAESPVHSSSSNDDFXXXXXXXXXXVSPDTS-DEDQD---NVEEEDGFLEQRAKRHK 437
           MSL AESPVHSSSS+DDF           S DTS DEDQD   N ++E+ F E  AKR K
Sbjct: 1   MSLAAESPVHSSSSSDDFAAFLDAELDVASSDTSPDEDQDDEENDDDEEDFQEPSAKRQK 60

Query: 438 MEDLEVTEEL 467
           +EDLE T+EL
Sbjct: 61  VEDLEPTKEL 70


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