BLASTX nr result

ID: Ophiopogon26_contig00004949 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00004949
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72320.1| uncharacterized protein A4U43_C04F18110 [Asparagu...    60   8e-08
ref|XP_020261399.1| LOW QUALITY PROTEIN: putative SWI/SNF-relate...    60   1e-07
ref|XP_010918825.1| PREDICTED: putative SWI/SNF-related matrix-a...    60   1e-07

>gb|ONK72320.1| uncharacterized protein A4U43_C04F18110 [Asparagus officinalis]
          Length = 369

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 12  QIPESMIIQALTAAGNNPNRALNLVLDSPDLATADQKPVKHVVLSELSIK 161
           +IPES II ALTAAGNNP+RA+ ++LDSP+L  AD KPV+  V SEL IK
Sbjct: 31  KIPESKIIGALTAAGNNPDRAVGILLDSPEL-IADPKPVEKEVESELPIK 79


>ref|XP_020261399.1| LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3 [Asparagus officinalis]
          Length = 1065

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 12  QIPESMIIQALTAAGNNPNRALNLVLDSPDLATADQKPVKHVVLSELSIK 161
           +IPES II ALTAAGNNP+RA+ ++LDSP+L  AD KPV+  V SEL IK
Sbjct: 31  KIPESKIIGALTAAGNNPDRAVGILLDSPEL-IADPKPVEKEVESELPIK 79


>ref|XP_010918825.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3 [Elaeis guineensis]
          Length = 1164

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
 Frame = +3

Query: 18  PESMIIQALTAAGNNPNRALNLVLDSPDLATADQKPVKHVVLSEL--------SIKPKYD 173
           PE  II+ALT AGNNPNRA+N++LD P++ TA   PVK  +  E+        S+  K  
Sbjct: 35  PEDDIIRALTVAGNNPNRAINIILDMPEVPTA-SNPVKQEMAPEVPTENDTASSLDSKNS 93

Query: 174 DLK*FG--------GQVVVRKEEQEICIEKDSILVPETVVKEE 278
             K  G         ++ V+K+E ++ ++K  IL+ E +VK+E
Sbjct: 94  IKKELGSGNDDVLMAEIRVKKDELDLDVKKYDILMDEGMVKKE 136


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