BLASTX nr result

ID: Ophiopogon26_contig00004887 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00004887
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ORC90506.1| procyclic form surface glycoprotein [Trypanosoma ...    60   2e-07
gb|ORC90509.1| putative procyclic form surface glycoprotein [Try...    57   3e-06
ref|XP_003330759.2| hypothetical protein PGTG_12296 [Puccinia gr...    56   4e-06
emb|CCC52044.1| putative procyclic form surface glycoprotein [Tr...    56   4e-06
ref|WP_089010477.1| hypothetical protein [Micromonospora inosito...    56   5e-06
ref|WP_046421706.1| hypothetical protein [Streptomyces malaysien...    55   7e-06
ref|WP_062045893.1| topoisomerase II [Streptomyces canus] >gi|97...    55   9e-06

>gb|ORC90506.1| procyclic form surface glycoprotein [Trypanosoma theileri]
          Length = 424

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/85 (43%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +3

Query: 12  YGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQY-CRLGQP 188
           YG PP      YGYG PP    P  YGYG PP      YGYG PP   VPPQ     GQP
Sbjct: 318 YGQPPAPLPQGYGYGQPPAAAAPQGYGYGQPPAPPQQGYGYGQPP---VPPQQGYGYGQP 374

Query: 189 HCYPARNSMQATP*L*FI*FGYGYG 263
              P +      P       GYGYG
Sbjct: 375 PVPPQQGYGYGQPPAAAAPQGYGYG 399



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/75 (44%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 6   YGYGWPPRTRNPQYGYGWPPRTRNPTQ-YGYGWPPRTRVPQYGYGWPPQTRVPPQYCRLG 182
           YGYG PP      YGYG PP    P Q YGYG PP      YGYG PP    P  Y   G
Sbjct: 343 YGYGQPPAPPQQGYGYGQPPVP--PQQGYGYGQPPVPPQQGYGYGQPPAAAAPQGY-GYG 399

Query: 183 QPHCYPARNSMQATP 227
           QP   P +  +   P
Sbjct: 400 QPQVPPQQGYVYGQP 414



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/55 (47%), Positives = 28/55 (50%)
 Frame = +3

Query: 6   YGYGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQY 170
           YGYG PP      YGYG PP    P  YGYG P       Y YG PP ++ P QY
Sbjct: 369 YGYGQPPVPPQQGYGYGQPPAAAAPQGYGYGQPQVPPQQGYVYGQPPASQPPAQY 423


>gb|ORC90509.1| putative procyclic form surface glycoprotein [Trypanosoma theileri]
          Length = 423

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/86 (43%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +3

Query: 9   GYGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQY-CRLGQ 185
           GYG PP   +  YGYG PP+   P  YGYG PP      YGYG PP   VPPQ     GQ
Sbjct: 320 GYGQPPVPPSQGYGYGQPPQ--QPQGYGYGQPPVPPQQGYGYGQPP---VPPQQGYGYGQ 374

Query: 186 PHCYPARNSMQATP*L*FI*FGYGYG 263
           P   P +              GYGYG
Sbjct: 375 PPVPPPQ--------------GYGYG 386


>ref|XP_003330759.2| hypothetical protein PGTG_12296 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gb|EFP86340.2| hypothetical protein PGTG_12296 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 253

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/56 (50%), Positives = 33/56 (58%)
 Frame = +3

Query: 3   QYGYGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQY 170
           Q GYG PP  + P  GYG PP  + P+Q GYG PP  + P  GYG PP  + P QY
Sbjct: 53  QQGYG-PPSGQPPSQGYGGPPAGQPPSQ-GYGGPPAGQPPSQGYGGPPSGQPPNQY 106


>emb|CCC52044.1| putative procyclic form surface glycoprotein [Trypanosoma vivax
           Y486]
          Length = 452

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/86 (41%), Positives = 40/86 (46%)
 Frame = +3

Query: 6   YGYGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQYCRLGQ 185
           YGYG PP  + P Y YG PP    P Q GYG PP  + P Y YG PP  +  P Y     
Sbjct: 351 YGYGQPPPPQQPGYSYGQPPLPP-PQQPGYGEPPPPQQPGYSYGQPPPPQ-QPGYSYGQP 408

Query: 186 PHCYPARNSMQATP*L*FI*FGYGYG 263
           P   P  +  Q  P       GYGYG
Sbjct: 409 PPQQPGYSYGQPPPQQ----PGYGYG 430


>ref|WP_089010477.1| hypothetical protein [Micromonospora inositola]
 emb|SCG35026.1| hypothetical protein GA0070613_0130 [Micromonospora inositola]
          Length = 296

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = +3

Query: 3   QYGYGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRV-PQYGYGWPPQTRVPP--QYC 173
           QYG  +PP+   PQYG  +PP+   P QYG G+PP+ +  PQYG  +PPQ   P    Y 
Sbjct: 30  QYGGDYPPQQPGPQYGGDYPPQQPGP-QYGGGYPPQQQPGPQYGGDYPPQQPGPQYGSYL 88

Query: 174 RLGQP 188
             GQP
Sbjct: 89  ESGQP 93


>ref|WP_046421706.1| hypothetical protein [Streptomyces malaysiense]
 gb|OIK27326.1| hypothetical protein VT52_012240 [Streptomyces malaysiense]
          Length = 344

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = +3

Query: 12  YGWPPRTRNPQYGYGWPPRTRNPTQYGYGWPPRTRVPQYGYGWPPQTRVPPQYCRLGQ 185
           YG PP+    Q GYG+P +T  P Q GYG+P +T  PQ GYG+P Q  +PPQ    GQ
Sbjct: 47  YGQPPQAPQ-QPGYGYPQQTP-PPQPGYGYPQQTPPPQPGYGYPQQPGMPPQQQPYGQ 102


>ref|WP_062045893.1| topoisomerase II [Streptomyces canus]
 gb|KUN10819.1| topoisomerase II [Streptomyces canus]
          Length = 1041

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +3

Query: 6   YGYGWPPRTRNPQYGYGWP--PRTRNP-TQYGYGWPPRTRVPQYGYGWPPQTRVPPQYCR 176
           YGY  PP   NPQ GYG+P  P   NP T YGY  PP    PQ GYG+P     P     
Sbjct: 118 YGYPQPPAPPNPQTGYGYPQPPAPPNPQTGYGYPQPPAPPNPQTGYGYPQPPAPPNPQSG 177

Query: 177 LGQPHCYPARNSMQATP 227
            G P       +  A P
Sbjct: 178 YGYPQAPTPPTAPTAAP 194


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