BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00004784
         (784 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA02993.1| Reverse transcriptase zinc-binding domain [Maclea...    57   9e-06

>gb|OVA02993.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 411

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
 Frame = -3

Query: 554 KRGWQEPDFCVTCECHVELVDHLLLSCSFVHDIWVKCAVYFRI----NIHMGESHCVWSR 387
           KRG    + C  C    E VDHLLL CSF ++IW      F I       + E       
Sbjct: 274 KRGMVVVNRCYLCCADGETVDHLLLHCSFANEIWTSFLAEFGIRWAFQNQVKEVFEEGIS 333

Query: 386 VVFWEDNGSLRGMLAMAICWNICKELNKMIFNCLSHSVEVCMYLICADIKFWAG 225
            +F E    L  +L  AICW + KE N+  FN     V+  +  I A + +W G
Sbjct: 334 SIFAEHGNYLWRLLPYAICWVLWKERNERYFNDKEKGVDKIIMEIKAQLLYWLG 387