BLASTX nr result

ID: Ophiopogon26_contig00004613 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00004613
         (451 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010267478.1| PREDICTED: ATP synthase delta chain, chlorop...    55   5e-06

>ref|XP_010267478.1| PREDICTED: ATP synthase delta chain, chloroplastic [Nelumbo
           nucifera]
          Length = 235

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = +2

Query: 248 STSLPAFSPDLVLKPTLKAHRKAATGYAAALLDVACCENVLNVIAKDARKVKRIVH 415
           S  LP+  P  +  P+   HRKAA+GYAAAL+D A C NVL  +  D R+  R+ H
Sbjct: 65  SPFLPSSQPSSLRSPSPVVHRKAASGYAAALMDRARCSNVLEAVEHDVRRFSRLFH 120


Top