BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00003449
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    68   1e-10
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   69   1e-10
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...    66   7e-10
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    65   1e-09
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...    65   2e-09
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                             64   8e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         64   8e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                              64   8e-09
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281...    63   1e-08
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    63   1e-08
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      63   1e-08
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-08
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-08
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-08
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-08
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo...    63   1e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...    63   1e-08
emb|CAA20201.1| putative transposable element [Arabidopsis thali...    62   2e-08
gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposo...    62   2e-08
gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subc...    62   2e-08

>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 33/91 (36%), Positives = 52/91 (57%)
 Frame = +3

Query: 168 CFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMGK 347
           C+ C K+GH+K+DC   K+                      D+E+ +  D+L+V S    
Sbjct: 123 CYKCGKKGHMKRDCPEKKK-RGSVSENKEGSSKSANVVTEEDSESGDG-DMLSVSSSSDH 180

Query: 348 LSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           L+D+WILDS C++HM+P +DWF+TYR ++ G
Sbjct: 181 LTDSWILDSTCSYHMTPNKDWFNTYRSVNSG 211


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 34/91 (37%), Positives = 44/91 (48%)
 Frame = +3

Query: 168 CFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMGK 347
           C+ C KRGH+KKDC + K+                      +    EA        G  +
Sbjct: 230 CYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVASTSDDGEVLYSEAA---VSTKGKNR 286

Query: 348 LSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           L+D WI+DSG TWHM+PRRDWF TY  +  G
Sbjct: 287 LTDVWIVDSGATWHMTPRRDWFCTYEPVSEG 317


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score = 66.2 bits (160), Expect = 7e-10
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = +3

Query: 168 CFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMGK 347
           C++CKK GH K+DC    +                      + ++E  C    ++S    
Sbjct: 115 CYYCKKEGHWKRDCPKKSK-----QQQQKKSGEEASVASRLEKDSETLCTFSCMDS---- 165

Query: 348 LSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
            SD+WILDS C++HM P RDWFSTY + DGG
Sbjct: 166 -SDSWILDSDCSYHMCPFRDWFSTYSIHDGG 195


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 31/91 (34%), Positives = 50/91 (54%)
 Frame = +3

Query: 168 CFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMGK 347
           C++CKK GH +K+C   K+                        +  E+ +VL++ +   K
Sbjct: 227 CYYCKKEGHFRKECPERKK--------KNNGKYNDESDIAVVADGYESAEVLSISTK--K 276

Query: 348 LSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
            S+ WILDSGC++HM+P  +WFS+Y+ +DGG
Sbjct: 277 HSEEWILDSGCSFHMTPNLEWFSSYKEIDGG 307


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
           (strain Landsberg) (fragment)
 emb|CAA37924.1| unnamed protein product, partial [Arabidopsis thaliana]
          Length = 1084

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 37/92 (40%), Positives = 46/92 (50%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           TC++CKK GH+KKDC A K  L                     TE     + L+V     
Sbjct: 165 TCWYCKKEGHVKKDCFARKRKLESENPGEAGVI----------TEKLVFSEALSVNDLA- 213

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
            + D W+LDSGCT HMS R+DWF  +R  DGG
Sbjct: 214 -VRDIWVLDSGCTSHMSARKDWFCNFR-KDGG 243


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 29/92 (31%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH    C   ++                       T+ +   ++L   +G  
Sbjct: 52  SCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCA 111

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY V+ GG
Sbjct: 112 QTSDQWILDTACTYHMCPNRDWFATYEVVQGG 143


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 29/92 (31%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH    C   ++                       T+ +   ++L   +G  
Sbjct: 235 SCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCA 294

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY V+ GG
Sbjct: 295 QTSDQWILDTACTYHMCPNRDWFATYEVVQGG 326


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 29/92 (31%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH    C   ++                       T+ +   ++L   +G  
Sbjct: 220 SCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCA 279

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY V+ GG
Sbjct: 280 QTSDQWILDTACTYHMCPNRDWFATYEVVQGG 311


>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
           Japonica Group]
          Length = 651

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH   +C   ++                       T+ +   ++L   +G  
Sbjct: 118 SCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCA 177

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY  + GG
Sbjct: 178 QTSDQWILDTACTYHMCPNRDWFATYEAVQGG 209


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH   +C   ++                       T+ +   ++L   +G  
Sbjct: 177 SCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCA 236

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY  + GG
Sbjct: 237 QTSDQWILDTACTYHMCPNRDWFATYEAVQGG 268


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH   +C   ++                       T+ +   ++L   +G  
Sbjct: 144 SCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCA 203

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF+TY  + GG
Sbjct: 204 QTSDQWILDTACTYHMCPNRDWFATYEAVQGG 235


>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 41/95 (43%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   C+ C  RGH+KKDC   K                       +    EA        
Sbjct: 177 KNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCVASTQEDGEILYSEAIS----SR 232

Query: 336 GMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           G  +L + WILDSG TWHM+P RDWF TY  + GG
Sbjct: 233 GEKQLHECWILDSGATWHMTPNRDWFCTYESISGG 267


>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 41/95 (43%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   C+ C  RGH+KKDC   K                       +    EA        
Sbjct: 177 KNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCVASTQEDGEILYSEAIS----SR 232

Query: 336 GMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           G  +L + WILDSG TWHM+P RDWF TY  + GG
Sbjct: 233 GEKQLHECWILDSGATWHMTPNRDWFCTYESISGG 267


>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1256

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 41/95 (43%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   C+ C  RGH+KKDC   K                       +    EA        
Sbjct: 177 KNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCVASTQEDGEILYSEAIS----SR 232

Query: 336 GMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           G  +L + WILDSG TWHM+P RDWF TY  + GG
Sbjct: 233 GEKQLHECWILDSGATWHMTPNRDWFCTYESISGG 267


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 41/95 (43%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   C+ C  RGH+KKDC   K                       +    EA        
Sbjct: 226 KNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCVASTQEDGEILYSEAIS----SR 281

Query: 336 GMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           G  +L + WILDSG TWHM+P RDWF TY  + GG
Sbjct: 282 GEKQLHECWILDSGATWHMTPNRDWFCTYESISGG 316


>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 41/95 (43%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   C+ C  RGH+KKDC   K                       +    EA        
Sbjct: 226 KNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCVASTQEDGEILYSEAIS----SR 281

Query: 336 GMGKLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           G  +L + WILDSG TWHM+P RDWF TY  + GG
Sbjct: 282 GEKQLHECWILDSGATWHMTPNRDWFCTYESISGG 316


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = +3

Query: 168 CFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMGK 347
           C +CK++GH K DC   K+                      DT +EE  D+  V      
Sbjct: 225 CNYCKEKGHWKFDCPKKKK--------QSEKQSVSAAVAEEDTNSEE--DIALVADEHTH 274

Query: 348 LSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
            SD W+LDSG ++H+ PRR+WF+TY  +DGG
Sbjct: 275 HSDVWVLDSGASYHICPRREWFTTYEQVDGG 305


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
 emb|CAB79135.1| putative transposable element [Arabidopsis thaliana]
          Length = 1308

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 33/86 (38%), Positives = 43/86 (50%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           TC+FCKK GH+KKDC A K  L                     TE     + L++     
Sbjct: 256 TCWFCKKEGHVKKDCYAGKRKLENEGQGKAGVI----------TEKLVYSEALSMYDQEA 305

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTY 422
           K  D W++DSGCT+HM+ R DWFS +
Sbjct: 306 K--DKWVIDSGCTYHMTSRMDWFSEF 329


>gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 295

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 35/98 (35%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = +3

Query: 156 KGPTCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVES 335
           K   CF C K GH KKDC                                E+ +VL V  
Sbjct: 115 KNKRCFICDKEGHFKKDC-----------------------------PNRESAEVLAVTD 145

Query: 336 GMGKLSDT---WILDSGCTWHMSPRRDWFSTYRVMDGG 440
                 DT   WILDSGC++HM+P +DWF TY  +DGG
Sbjct: 146 -----QDTHKEWILDSGCSFHMTPNKDWFETYNQVDGG 178


>gb|ABA93547.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 546

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 28/92 (30%), Positives = 43/92 (46%)
 Frame = +3

Query: 165 TCFFCKKRGHIKKDCLAYKEWLXXXXXXXXXXXXXXXXXXXXDTEAEEACDVLTVESGMG 344
           +C +CK+ GH   +C   ++                       T+ +   ++L   +G  
Sbjct: 52  SCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCA 111

Query: 345 KLSDTWILDSGCTWHMSPRRDWFSTYRVMDGG 440
           + SD WILD+ CT+HM P RDWF TY  + GG
Sbjct: 112 QTSDQWILDTACTYHMCPNRDWFVTYEAVQGG 143