BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00003267
         (937 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   266   e-109
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   266   e-109
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   266   e-109
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   266   e-109
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   266   e-108
emb|CAH65951.1| H0716A07.9 [Oryza sativa]                             264   e-108
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     264   e-108
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-...   264   e-108
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     264   e-108
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         264   e-108
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   264   e-108
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   264   e-108
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   263   e-108
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   264   e-108
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   264   e-108

>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  266 bits (680), Expect(2) = e-109
 Identities = 124/203 (61%), Positives = 161/203 (79%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+S
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (399), Expect(2) = e-109
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  266 bits (680), Expect(2) = e-109
 Identities = 124/203 (61%), Positives = 161/203 (79%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+S
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (399), Expect(2) = e-109
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  266 bits (680), Expect(2) = e-109
 Identities = 124/203 (61%), Positives = 161/203 (79%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+S
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (399), Expect(2) = e-109
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  266 bits (680), Expect(2) = e-109
 Identities = 124/203 (61%), Positives = 161/203 (79%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+S
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (399), Expect(2) = e-109
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  266 bits (680), Expect(2) = e-108
 Identities = 124/203 (61%), Positives = 161/203 (79%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+S
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  157 bits (396), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTFAGFAVNEADKCVY 973


>emb|CAH65951.1| H0716A07.9 [Oryza sativa]
          Length = 1216

 Score =  264 bits (675), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 904  LSQNFDMKDLGVADVILNLKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 963

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 964  LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1023

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSWKSCK+T++ R
Sbjct: 1024 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWKSCKETILTR 1083

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1084 STMEAELTALDTATVEAEWLRDL 1106



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 775  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 834

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 835  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 869


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1422 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1481

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1482 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1541

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1542 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1601

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1602 STMEAELTALDTATVEAEWLRDL 1624



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 1293 ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 1352

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 1353 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 1387


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1224 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1283

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1284 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1343

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1344 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1403

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1404 STMEAELTALDTATVEAEWLRDL 1426



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 1095 ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 1154

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 1155 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 1189


>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1397

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1085 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1144

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1145 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1204

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1205 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1264

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1265 STMEAELTALDTATVEAEWLRDL 1287



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 956  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 1015

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 1016 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 1050


>gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1393

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1085 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1144

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1145 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1204

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1205 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1264

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1265 STMEAELTALDTATVEAEWLRDL 1287



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 956  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 1015

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 1016 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 1050


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1097 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1156

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1157 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1216

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1217 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1276

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1277 STMEAELTALDTATVEAEWLRDL 1299



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 968  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 1027

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 1028 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 1062


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 1187

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1188 STMEAELTALDTATVEAEWLRDL 1210



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 879  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 938

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 939  SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 973


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99553.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1224

 Score =  263 bits (671), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 159/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 930  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 989

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 990  LHKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1049

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 1050 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDKIKATSGYVFTLGGGAVSWRSCKQTILTR 1109

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 1110 STMEAELTALDTATVEAEWLRDL 1132



 Score =  159 bits (403), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 87/95 (91%)
 Frame = -1

Query: 937  ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
            AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 801  ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 860

Query: 757  SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
            SLYGLKQAPKQWH+KFDK++   GFAVNE DKCVY
Sbjct: 861  SLYGLKQAPKQWHEKFDKILTSAGFAVNEADKCVY 895


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 801  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 860

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 861  LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 920

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 921  LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 980

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 981  STMEAELTALDTATVEAEWLRDL 1003



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937 ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
           AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 672 ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 731

Query: 757 SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
           SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 732 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 766


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 764

 Score =  264 bits (674), Expect(2) = e-108
 Identities = 123/203 (60%), Positives = 160/203 (78%)
 Frame = -2

Query: 609  LSKNFDMKDLGPADMILGMKITRNNKGISLSLSHSIHKMLHKFNFHDSKAVSTPYDSSIS 430
            LS+NFDMKDLG AD+IL +K+ R   GI+L  SH + K+L++F + DSK   TPYD S+ 
Sbjct: 432  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 491

Query: 429  LKKNEGEPVSQLRYSQLIGSLLYISNRTRPDIAYAVGRLSRYTSNPSKEHWTALERVFKY 250
            L+KN+    +QL YSQ+IGSL+Y+++ TRPDI++AV +LSR+TSNP  +HW ALERV +Y
Sbjct: 492  LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 551

Query: 249  LKGTVEYCLTYTGYPDAIEGYSDANWVTDSNSVKSTTGYVFLYGGAAVSWKSCKQTLIAR 70
            LKGTVE  L YTGYP  +EGYSD+NW++D + +K+T+GYVF  GG AVSW+SCKQT++ R
Sbjct: 552  LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTR 611

Query: 69   STMEAELIALDTTCTEAEWLKDL 1
            STMEAEL ALDT   EAEWL+DL
Sbjct: 612  STMEAELTALDTATVEAEWLRDL 634



 Score =  158 bits (400), Expect(2) = e-108
 Identities = 72/95 (75%), Positives = 86/95 (90%)
 Frame = -1

Query: 937 ARISTIRVLLALAAIHKMVIHQMDVKTAFLNGDLDEEIYMNQPEGFIAKGQERKVCKLVK 758
           AR++TIRVLL+LAA H +++HQMDVKTAFLNG+LDEEIYM+QP+GF+ +GQE KVCKL+K
Sbjct: 303 ARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLK 362

Query: 757 SLYGLKQAPKQWHQKFDKVIVQYGFAVNEHDKCVY 653
           SLYGLKQAPKQWH+KFDK +   GFAVNE DKCVY
Sbjct: 363 SLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVY 397