BLASTX nr result
ID: Ophiopogon26_contig00002847
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00002847
(1152 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 690 0.0
gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus... 566 0.0
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 501 e-160
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 499 e-160
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 497 e-159
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub... 479 e-154
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 479 e-152
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana... 446 e-139
gb|AQK60570.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 423 e-135
gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial ... 423 e-133
gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 423 e-133
ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set... 428 e-132
gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 423 e-132
gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 423 e-132
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub... 425 e-132
gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobi... 416 e-131
gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 423 e-131
gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays... 423 e-131
ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V sub... 424 e-131
gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii] 424 e-131
>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
Length = 1945
Score = 690 bits (1781), Expect = 0.0
Identities = 331/383 (86%), Positives = 356/383 (92%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
KHCA+D SIEYQKQI LPNS+ T SGLVGH+HLD RLKILNQ TDG+LHKCQEV +GHT
Sbjct: 918 KHCAIDFSIEYQKQICLPNSA-TVSGLVGHLHLDTTRLKILNQNTDGVLHKCQEVIRGHT 976
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINT 791
RKKGHLSNI RRTFLS+SE C S Q ND NLSEFPCLQFSY AG VDETL+ GMHIMINT
Sbjct: 977 RKKGHLSNILRRTFLSASEDCSSLQSNDANLSEFPCLQFSYCAGGVDETLQQGMHIMINT 1036
Query: 790 ICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDA 611
ICPILLDTI+KGDPR+D VNIIW+GPD+TSWVS+P ++GELALEVVVQKVAA+K GDA
Sbjct: 1037 ICPILLDTIIKGDPRIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVVVQKVAAKKNGDA 1096
Query: 610 WRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEH 431
WRIVLDACLPV+HLI+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK IRMVSKGVIKEH
Sbjct: 1097 WRIVLDACLPVIHLINTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKSIRMVSKGVIKEH 1156
Query: 430 LVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALG 251
LVLVGNNMTCTGNLIGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE+AAEKCHTD+LG
Sbjct: 1157 LVLVGNNMTCTGNLIGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFEKAAEKCHTDSLG 1216
Query: 250 SVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACL 71
S+VSSVSWGKHVA+GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVREPQE+DLPGACL
Sbjct: 1217 SIVSSVSWGKHVAVGTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVREPQERDLPGACL 1276
Query: 70 GSDIEDFLDDFQNDDMPLSPEPN 2
GSDI+DFLDDFQ DDMPLSPEPN
Sbjct: 1277 GSDIDDFLDDFQGDDMPLSPEPN 1299
>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
Length = 1833
Score = 567 bits (1460), Expect = 0.0
Identities = 270/309 (87%), Positives = 289/309 (93%)
Frame = -3
Query: 928 LSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDP 749
L SE C S Q ND NLSEFPCLQFSY AG VDETL+ GMHIMINTICPILLDTI+KGDP
Sbjct: 879 LRGSEDCSSLQSNDANLSEFPCLQFSYCAGGVDETLQQGMHIMINTICPILLDTIIKGDP 938
Query: 748 RVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHL 569
R+D VNIIW+GPD+TSWVS+P ++GELALEVVVQKVAA+K GDAWRIVLDACLPV+HL
Sbjct: 939 RIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVVVQKVAAKKNGDAWRIVLDACLPVIHL 998
Query: 568 IDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNL 389
I+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK IRMVSKGVIKEHLVLVGNNMTCTGNL
Sbjct: 999 INTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKSIRMVSKGVIKEHLVLVGNNMTCTGNL 1058
Query: 388 IGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAL 209
IGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE+AAEKCHTD+LGS+VSSVSWGKHVA+
Sbjct: 1059 IGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFEKAAEKCHTDSLGSIVSSVSWGKHVAV 1118
Query: 208 GTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQND 29
GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVREPQE+DLPGACLGSDI+DFLDDFQ D
Sbjct: 1119 GTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVREPQERDLPGACLGSDIDDFLDDFQGD 1178
Query: 28 DMPLSPEPN 2
DMPLSPEPN
Sbjct: 1179 DMPLSPEPN 1187
>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
guineensis]
Length = 1708
Score = 501 bits (1290), Expect = e-160
Identities = 249/384 (64%), Positives = 306/384 (79%), Gaps = 3/384 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
K CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D IL KCQ+V G+
Sbjct: 917 KDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQDVIFGYG 976
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIM 800
+KKG LS+ FRR LS SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M
Sbjct: 977 KKKGKLSHFFRRIILSLSECCSTRQPDVGNLSPFPCLQFSYRDQSTTPDCESLEGAIHVM 1036
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
NTICPILLDTI+KGDPRV NI+WTGPDATSWV + +TLKGE+A+EVVV+K A R+
Sbjct: 1037 ANTICPILLDTIIKGDPRVHEANIVWTGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRN 1096
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR V+DACLPV+HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+
Sbjct: 1097 GDAWRTVIDACLPVIHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVL 1156
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
K HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD
Sbjct: 1157 KGHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTD 1216
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPG 80
+L SVVSS WGKHVA+GTG+ F+++W KQQ+ N+++GK YD L VR +++
Sbjct: 1217 SLVSVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGD 1275
Query: 79 ACLGSDIEDFLDDFQNDDMPLSPE 8
C D++D L+ +N+++ LSPE
Sbjct: 1276 GC-SLDVDD-LEVNENNEVCLSPE 1297
>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
Length = 1673
Score = 499 bits (1286), Expect = e-160
Identities = 248/384 (64%), Positives = 305/384 (79%), Gaps = 3/384 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
K CA D SIEYQK+I L +SS T SGLVGHIHLD M LK+LN++ D IL KCQ+V G+
Sbjct: 917 KDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEILRKCQDVIFGYA 976
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIM 800
+KKG LS+ FRR LS SECC ++QP+ GNLS FPCLQFSY + E+LE +H+M
Sbjct: 977 KKKGKLSHFFRRIILSLSECCCTRQPDVGNLSPFPCLQFSYCDQSATPDCESLEGAIHVM 1036
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
NTICPILLDTI+KGDPRV NI+W GPDATSWV + +TLKGE+A+EVVV+K A R+
Sbjct: 1037 ANTICPILLDTIIKGDPRVYDANIVWIGPDATSWVRNSCKTLKGEVAIEVVVEKDAVRRN 1096
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I V+KGV+
Sbjct: 1097 GDAWRTVMDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQTVQRLSASITKVAKGVL 1156
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
K+HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMKCFERAAEKCHTD
Sbjct: 1157 KDHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMKCFERAAEKCHTD 1216
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPG 80
+L SVVSS WGKHVA+GTG+ F+++W KQQ+ N+++GK YD L VR +++
Sbjct: 1217 SLASVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLELVRTSSQREAGD 1275
Query: 79 ACLGSDIEDFLDDFQNDDMPLSPE 8
C D++D L+ +N+++ LSPE
Sbjct: 1276 GC-SLDVDD-LEANENNEVCLSPE 1297
>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1-like [Phoenix dactylifera]
Length = 1656
Score = 497 bits (1280), Expect = e-159
Identities = 248/384 (64%), Positives = 304/384 (79%), Gaps = 3/384 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
K CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D IL KCQ+V G+
Sbjct: 875 KDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQDVIFGYG 934
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD---ETLEHGMHIM 800
+KKG LS+ FRR L SECC ++QP+ GNLS FPCLQFSY E+LE G+H+M
Sbjct: 935 KKKGKLSHFFRRIILLVSECCSTRQPDVGNLSPFPCLQFSYCDQTATPDCESLERGIHVM 994
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
NTICPILLDTI+KGDPRV NI+WTGP ATSWV + +TLKGE+A+EVVV+K A+R+
Sbjct: 995 ANTICPILLDTIIKGDPRVREANIVWTGPYATSWVRNSCKTLKGEVAVEVVVEKDASRRH 1054
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRLS I MV+KGV+
Sbjct: 1055 GDAWRTVIDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQAVQRLSASITMVAKGVL 1114
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
K+HL+LV N+M+CTGNLIGFNT+G+KAL RSLKVQVPFTEATL+TPMKCFERAAEKCHTD
Sbjct: 1115 KDHLILVANSMSCTGNLIGFNTAGYKALXRSLKVQVPFTEATLITPMKCFERAAEKCHTD 1174
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPG 80
+L SVVSS WGKHVA+GTG+ F+++W K+Q+ N+++GK YD L VR + +
Sbjct: 1175 SLTSVVSSCLWGKHVAIGTGSPFQILW-NKRQMAENQNIGKGFYDFLELVRTSSQGEAGN 1233
Query: 79 ACLGSDIEDFLDDFQNDDMPLSPE 8
C D++D L +ND++ LSPE
Sbjct: 1234 GC-SVDVDD-LGVNENDEVCLSPE 1255
>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1444
Score = 479 bits (1234), Expect = e-154
Identities = 241/384 (62%), Positives = 293/384 (76%), Gaps = 3/384 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
K CA + IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN D ILHKCQ V +
Sbjct: 916 KDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQAVIFSYG 975
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE---TLEHGMHIM 800
+KKG LS+ FRR FLS+ +CC +QP+DGNL PCLQFSY + +LE +H+M
Sbjct: 976 KKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNNISLERAIHVM 1035
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
TICPILLDTIVKGDPRV V I+W GPDATSWV S +TLKG+L LEVV+ + A R+
Sbjct: 1036 SETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEVVLGQDAVRQS 1095
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK I+MVSKGV+
Sbjct: 1096 GDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSKSIKMVSKGVM 1155
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCFERAAEKC D
Sbjct: 1156 KEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCFERAAEKCQVD 1215
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPG 80
+L SVVSS SWGK+VA+GTG F+++W K+Q+ N+D+GK VYD L +RE + G
Sbjct: 1216 SLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELLRETSSGEATG 1274
Query: 79 ACLGSDIEDFLDDFQNDDMPLSPE 8
L +D+++ ++ + + LSP+
Sbjct: 1275 RYL-ADVDELAEE---NGICLSPD 1294
>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1738
Score = 479 bits (1234), Expect = e-152
Identities = 241/384 (62%), Positives = 293/384 (76%), Gaps = 3/384 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
K CA + IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN D ILHKCQ V +
Sbjct: 916 KDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQAVIFSYG 975
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE---TLEHGMHIM 800
+KKG LS+ FRR FLS+ +CC +QP+DGNL PCLQFSY + +LE +H+M
Sbjct: 976 KKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQNNISLERAIHVM 1035
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
TICPILLDTIVKGDPRV V I+W GPDATSWV S +TLKG+L LEVV+ + A R+
Sbjct: 1036 SETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGLEVVLGQDAVRQS 1095
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRLSK I+MVSKGV+
Sbjct: 1096 GDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRLSKSIKMVSKGVM 1155
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMKCFERAAEKC D
Sbjct: 1156 KEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMKCFERAAEKCQVD 1215
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPG 80
+L SVVSS SWGK+VA+GTG F+++W K+Q+ N+D+GK VYD L +RE + G
Sbjct: 1216 SLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLELLRETSSGEATG 1274
Query: 79 ACLGSDIEDFLDDFQNDDMPLSPE 8
L +D+++ ++ + + LSP+
Sbjct: 1275 RYL-ADVDELAEE---NGICLSPD 1294
>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
Length = 1800
Score = 446 bits (1147), Expect = e-139
Identities = 221/383 (57%), Positives = 285/383 (74%), Gaps = 4/383 (1%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
C D IEYQK+I LP + SGLVGHIHLD M+L+ LN++ D +LH C+EV + +K
Sbjct: 921 CVTDFLIEYQKEIILPGNPEPTSGLVGHIHLDKMQLESLNRSIDEVLHTCEEVILKNAKK 980
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHG---MHIMIN 794
KG S++F++ L +SECC Q+ D NLS PCLQFSY V + E+ + ++ N
Sbjct: 981 KGQFSHLFKKITLMASECCSIQKAKDSNLSRTPCLQFSYCDENVAPSCEYFEGIVQVLAN 1040
Query: 793 TICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGD 614
T+ P LLDTIVKGDPRV ++W GPDATSWV + TLKGELA+E+V++K AA GD
Sbjct: 1041 TVYPTLLDTIVKGDPRVHEAKVVWVGPDATSWVRNSSNTLKGELAVEMVIEKSAAPHNGD 1100
Query: 613 AWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKE 434
AWR +DACLPVM LID RSIPYG+QQI+ELFGISCAFDQ+V+R+S IR V+KGV+K+
Sbjct: 1101 AWRTAMDACLPVMRLIDARRSIPYGVQQIRELFGISCAFDQAVERMSTSIRKVAKGVLKD 1160
Query: 433 HLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDAL 254
HL+LV ++MTCTG L GFNT G+KA FRSLKVQVPFTEATL TPMKCFERAAEKCH+D+L
Sbjct: 1161 HLILVASSMTCTGKLNGFNTGGYKATFRSLKVQVPFTEATLFTPMKCFERAAEKCHSDSL 1220
Query: 253 GSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR-EPQEKDLPGA 77
S VSS SWGKHVALGTG+ F++IW K+Q+ ++D+GK +YD L VR +++ GA
Sbjct: 1221 DSGVSSCSWGKHVALGTGSSFQIIW-DKKQMANDKDIGKGLYDFLVMVRTSGDQREANGA 1279
Query: 76 CLGSDIEDFLDDFQNDDMPLSPE 8
CL D++D L++ ++ + LSP+
Sbjct: 1280 CL-EDVDD-LEEENDEALCLSPQ 1300
>gb|AQK60570.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1160
Score = 423 bits (1088), Expect = e-135
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 147 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 206
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 207 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 266
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 267 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 326
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 327 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 386
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 387 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 446
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 447 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 503
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 504 DDVDYLVEENAADDMCLSPEPD 525
>gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays]
Length = 1436
Score = 423 bits (1088), Expect = e-133
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 919 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 978
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 979 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 1038
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 1039 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 1098
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1099 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 1158
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1159 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1218
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1219 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 1275
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 1276 DDVDYLVEENAADDMCLSPEPD 1297
>gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1465
Score = 423 bits (1088), Expect = e-133
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 919 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 978
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 979 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 1038
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 1039 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 1098
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1099 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 1158
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1159 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1218
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1219 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 1275
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 1276 DDVDYLVEENAADDMCLSPEPD 1297
>ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica]
Length = 2038
Score = 428 bits (1101), Expect = e-132
Identities = 208/383 (54%), Positives = 283/383 (73%), Gaps = 2/383 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+SIE+QKQI L +S A LVGHIHLD +L+ +N +T IL KC+E++ + +K
Sbjct: 919 CATDISIEHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKK 978
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINT 791
KGHL ++F++ S+ +C +Q DG L PC+QFS+ + E++E ++++ ++
Sbjct: 979 KGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTILSESVERAVNVIADS 1038
Query: 790 ICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDA 611
+C +LLDTI+KGDPR+ + IIW +ATSWV + TLKGE LE++V+K A + G A
Sbjct: 1039 VCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYA 1098
Query: 610 WRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEH 431
WR V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+H
Sbjct: 1099 WRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDH 1158
Query: 430 LVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALG 251
L+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1159 LILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLG 1218
Query: 250 SVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACL 71
VVSS SWGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK G
Sbjct: 1219 CVVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAF 1275
Query: 70 GSDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DD+ LSPEP+
Sbjct: 1276 LDDVDYLVEENAVDDVCLSPEPD 1298
>gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1615
Score = 423 bits (1088), Expect = e-132
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 602 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 661
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 662 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 721
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 722 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 781
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 782 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 841
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 842 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 901
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 902 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 958
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 959 DDVDYLVEENAADDMCLSPEPD 980
>gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1663
Score = 423 bits (1088), Expect = e-132
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 919 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 978
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 979 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 1038
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 1039 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 1098
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 1099 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 1158
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1159 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1218
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1219 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 1275
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 1276 DDVDYLVEENAADDMCLSPEPD 1297
>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
ref|XP_010246064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
ref|XP_010246066.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
Length = 1908
Score = 425 bits (1093), Expect = e-132
Identities = 213/380 (56%), Positives = 269/380 (70%)
Frame = -3
Query: 1141 ALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKK 962
A+D SI+YQKQ P +S T +GLVGHIHLD M LK LN++ IL CQE +KK
Sbjct: 921 AVDFSIKYQKQCIFPGNSVTNAGLVGHIHLDKMSLKALNRSMADILKDCQETLNSFRKKK 980
Query: 961 GHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICP 782
L +I RR L SECC + P D SEFPCLQF + + D +++ IM N +CP
Sbjct: 981 DQLGHILRRVLLLVSECCSVRLP-DKERSEFPCLQFLWEDTSSD-SIQRISKIMANKVCP 1038
Query: 781 ILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRI 602
ILL T +KGDP+V + NI+WT PD SWV +P + GEL LEVVV K A ++ GDAWR+
Sbjct: 1039 ILLGTNIKGDPQVLSANIMWTSPDVCSWVRNPCKIQNGELVLEVVVDKAAVKRTGDAWRV 1098
Query: 601 VLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVL 422
VL++CLPV+HL+DT RSIPYGI+QI+EL GISCAFDQ+VQRLS +RMV+KGV+KEHL+L
Sbjct: 1099 VLNSCLPVIHLVDTRRSIPYGIKQIQELLGISCAFDQAVQRLSSSVRMVTKGVLKEHLIL 1158
Query: 421 VGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVV 242
N+MTCTGN+IGFN+ G+KAL RSL V VPFTEATL TP KCFE+AA+KCH D+L S+V
Sbjct: 1159 AANSMTCTGNMIGFNSGGYKALLRSLNVHVPFTEATLFTPRKCFEKAAQKCHMDSLSSIV 1218
Query: 241 SSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSD 62
+S SWGKHV +GTG FE++W K ++ N+D DVYD L VR E D CLG +
Sbjct: 1219 ASCSWGKHVTVGTGAQFEILWNNK-EMGVNQDGEIDVYDFLQLVRGSNEGDSFTTCLGQE 1277
Query: 61 IEDFLDDFQNDDMPLSPEPN 2
I+D + +N++ LS PN
Sbjct: 1278 IDDL--ELENEERELSLSPN 1295
>gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobium catenatum]
Length = 1205
Score = 416 bits (1068), Expect = e-131
Identities = 211/351 (60%), Positives = 261/351 (74%), Gaps = 3/351 (0%)
Frame = -3
Query: 1150 KHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHT 971
+ CA + SIEY+K + +S SGLVGHIHLD LK N+ T+ IL KCQE+
Sbjct: 280 RDCASEFSIEYKKNMVACDSLEAVSGLVGHIHLDRGMLKAWNKRTEEILLKCQEILSSRQ 339
Query: 970 RKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAV-DETLEHGMHIM 800
+KKG LS +F+ L++SECC Q +D NLS PCLQF YF G + DE+L+ +HIM
Sbjct: 340 KKKGPLSFLFKGIVLTTSECC--QHSDDANLSSVPCLQFYYFDRGGKISDESLDRVIHIM 397
Query: 799 INTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKK 620
N ICP+LL+T++KGD RVD NIIW P TS V R +KGELA+EVV++K AR+
Sbjct: 398 ANVICPMLLETVIKGDSRVDLANIIWIEPTTTSSVRDR-RPMKGELAIEVVIEKSFARQS 456
Query: 619 GDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVI 440
GDAWR VLDACLPVMHLID RSIPYGI+Q++ L GISC+F+QSV RLS I+MV+KGV+
Sbjct: 457 GDAWRTVLDACLPVMHLIDMRRSIPYGIKQVEHLLGISCSFEQSVLRLSASIKMVAKGVL 516
Query: 439 KEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTD 260
KEHL+LV N+MTCTGN +GFN SGFK L RSLK+Q+PFTEATL TP+KCFERAA+KCHTD
Sbjct: 517 KEHLILVANSMTCTGNFLGFNNSGFKKLLRSLKIQMPFTEATLFTPIKCFERAAQKCHTD 576
Query: 259 ALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 107
L S+VSS WGKHVA+GTG+ F+V W +QQV N+DV KDVY+ L V+
Sbjct: 577 TLTSIVSSCLWGKHVAVGTGSCFKVFW-DRQQVKANKDVEKDVYEFLELVQ 626
>gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1719
Score = 423 bits (1088), Expect = e-131
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 706 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 765
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 766 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 825
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 826 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 885
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 886 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 945
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 946 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1005
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1006 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 1062
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 1063 DDVDYLVEENAADDMCLSPEPD 1084
>gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
gb|AQK60577.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
gb|AQK60582.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
Length = 1776
Score = 423 bits (1088), Expect = e-131
Identities = 206/382 (53%), Positives = 277/382 (72%), Gaps = 1/382 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IE+QKQI L +S A LVGHIHLD L+ +N +T IL KCQEV+ +K
Sbjct: 763 CATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDILQKCQEVSGRFGKK 822
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-DETLEHGMHIMINTI 788
KGHL +IF++ ++ +C +Q P DG L + PC+QF++ V E++E ++++ +++
Sbjct: 823 KGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLSESIERAVNVIADSV 882
Query: 787 CPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAW 608
C +LLDTI+KGDPR+ A +IW DA SWV + KGE ALE++V+K A GDAW
Sbjct: 883 CSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEIIVEKDDAVSNGDAW 942
Query: 607 RIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHL 428
R +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MV+KGV+K+HL
Sbjct: 943 RTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLSTTVKMVNKGVLKDHL 1002
Query: 427 VLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGS 248
+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG
Sbjct: 1003 ILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGC 1062
Query: 247 VVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLG 68
VVSS +WGKH A+GTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1063 VVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--TDYMFL 1119
Query: 67 SDIEDFLDDFQNDDMPLSPEPN 2
D++ +++ DDM LSPEP+
Sbjct: 1120 DDVDYLVEENAADDMCLSPEPD 1141
>ref|XP_010238829.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brachypodium
distachyon]
gb|KQJ92654.1| hypothetical protein BRADI_4g45065v3 [Brachypodium distachyon]
Length = 1954
Score = 424 bits (1091), Expect = e-131
Identities = 208/384 (54%), Positives = 278/384 (72%), Gaps = 3/384 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
CA D+ IEY KQI L SS LVGHIHL+ RL ++N +T+ IL KCQEV+ H +K
Sbjct: 918 CATDICIEYHKQI-LDGSSEATPALVGHIHLEKARLDMINVSTEDILQKCQEVSLKHGKK 976
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPN-DGNLSEFPCLQFSYFAGA--VDETLEHGMHIMIN 794
KGHL ++F++ S+ +C +Q+P DG L + PCLQFS+ + E++E + ++ N
Sbjct: 977 KGHLGHLFKKITFSTCDCSFTQKPMIDGKLPKVPCLQFSFSEDIPMLSESVERAVSVLAN 1036
Query: 793 TICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGD 614
++C +LLDTI+KGDPR+ I+W G DA SWV + + KGE +E+VV+K A K+GD
Sbjct: 1037 SLCDVLLDTIIKGDPRIQEAKIMWVGSDAQSWVKNTRKVSKGEPTVEIVVEKNEASKQGD 1096
Query: 613 AWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKE 434
AWRI +DAC+PV+ LIDT RSIPYGIQQ++EL GISC+FDQ VQRLS ++ V+KG++K+
Sbjct: 1097 AWRIAMDACIPVIDLIDTRRSIPYGIQQVRELLGISCSFDQIVQRLSTTMKTVAKGILKD 1156
Query: 433 HLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDAL 254
HL+LV N+MTCTGNL GFNT G++A FR+LKVQVPFTE+TL TPMKCFE+AAEKCH+DAL
Sbjct: 1157 HLILVANSMTCTGNLYGFNTGGYRATFRALKVQVPFTESTLFTPMKCFEKAAEKCHSDAL 1216
Query: 253 GSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGAC 74
G VVSS SWGKH ALGTG+ F+++W + Q+ N++ G +YD LA VR QEK
Sbjct: 1217 GCVVSSCSWGKHAALGTGSSFQILWNE-NQLKSNKEYGDGLYDFLAMVRTDQEK--ARYT 1273
Query: 73 LGSDIEDFLDDFQNDDMPLSPEPN 2
D++ ++D DD+ LSPE N
Sbjct: 1274 FLDDVDYLVEDNAMDDICLSPELN 1297
>gb|PAN04046.1| hypothetical protein PAHAL_A00310 [Panicum hallii]
Length = 1978
Score = 424 bits (1091), Expect = e-131
Identities = 207/383 (54%), Positives = 276/383 (72%), Gaps = 2/383 (0%)
Frame = -3
Query: 1144 CALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRK 965
C D+ IE+QKQI L +S A LVGHIHLD +L+ +N T IL KC+EV++ + +K
Sbjct: 918 CTTDICIEHQKQINLDGTSEAAPSLVGHIHLDKAQLERININTQDILQKCEEVSRRYGKK 977
Query: 964 KGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINT 791
KGHL ++ R+ ++ +C Q P DG L PC+QFS+ + E++E ++++ ++
Sbjct: 978 KGHLCHLLRKITFATCDCSFGQNPVDGYLHMIPCVQFSFSDDNTILSESVERAVNVIADS 1037
Query: 790 ICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDA 611
+C +LLDTI+KGDPR+ A IIW DATSWV + +T KGE ALE++V+K A GDA
Sbjct: 1038 VCSVLLDTIIKGDPRIQAAKIIWVESDATSWVKNTRKTPKGEPALEIIVEKDEAVHNGDA 1097
Query: 610 WRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEH 431
WR +DAC+PV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS ++MVSKGV+K+H
Sbjct: 1098 WRTTMDACIPVLNLIDTRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVKMVSKGVLKDH 1157
Query: 430 LVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALG 251
L+LV N+MTCTGNL GFNT G+KA FRSLKVQVPFT +TL TPMKCFE+AAEKC +D+LG
Sbjct: 1158 LILVANSMTCTGNLYGFNTGGYKATFRSLKVQVPFTVSTLFTPMKCFEKAAEKCDSDSLG 1217
Query: 250 SVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACL 71
VVSS SWGKH A+GTG+ FE++W + Q+ N++ G +YD LA VR QEK G
Sbjct: 1218 CVVSSCSWGKHAAIGTGSSFEILWNE-NQLKTNKEYGDGLYDFLALVRTDQEK--AGYAF 1274
Query: 70 GSDIEDFLDDFQNDDMPLSPEPN 2
D++ + + DD+ LSPEP+
Sbjct: 1275 LDDVDYLVAENAVDDVCLSPEPD 1297