BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00000711
         (1903 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplas...   574   0.0  
ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF,...   503   e-169
ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF,...   499   e-169
ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF,...   499   e-168
ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF,...   496   e-166
ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplas...   484   e-161
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,...   478   e-160
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,...   478   e-159
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,...   478   e-159
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,...   478   e-159
gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata]             449   e-148
ref|XP_020676962.1| RNA polymerase sigma factor sigF, chloroplas...   449   e-148
gb|PKU65607.1| RNA polymerase sigma factor sigF, chloroplastic [...   448   e-147
gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica]   439   e-146
gb|AKC88774.1| sigma factor [Melianthus villosus]                     444   e-146
emb|CBI32760.3| unnamed protein product, partial [Vitis vinifera]     443   e-146
ref|XP_019077288.1| PREDICTED: RNA polymerase sigma factor sigF,...   443   e-145
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,...   443   e-145
ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplas...   441   e-145
ref|XP_021827462.1| RNA polymerase sigma factor sigF, chloroplas...   441   e-145

>ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplastic [Asparagus
            officinalis]
 gb|ONK72278.1| uncharacterized protein A4U43_C04F17680 [Asparagus officinalis]
          Length = 582

 Score =  574 bits (1479), Expect(2) = 0.0
 Identities = 286/371 (77%), Positives = 316/371 (85%)
 Frame = +2

Query: 497  SREIVLEDETMIXXXXXXXXXXXXXXXXXXXXXXVSEVSSATIAELNTKIEKGLNTDDPF 676
            + E+ + +ET +                      V EVS A + +L  K++K LNTDDPF
Sbjct: 212  TEEVAINEETTVRSKRRLERQSKRRKVPKKPENAVYEVSGAMLVDLKKKVQKALNTDDPF 271

Query: 677  RLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQRLKMQFGHEPTLAEWAGALGMSCQ 856
            RLFLWGPETKQLLTVKEEKDLFL+IQELM+LE  KQRL+MQFG EPTLAEWAGA+GMSCQ
Sbjct: 272  RLFLWGPETKQLLTVKEEKDLFLNIQELMKLEGSKQRLQMQFGREPTLAEWAGAVGMSCQ 331

Query: 857  VLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGLNIQDLLQEGSRGLMKSLEKFKPKA 1036
             LQSCLRSG RSREKMIYANFRLVIHVA+QYEGKGLNIQDLLQEGS+GLMKSLEKFKPK+
Sbjct: 332  TLQSCLRSGNRSREKMIYANFRLVIHVAKQYEGKGLNIQDLLQEGSKGLMKSLEKFKPKS 391

Query: 1037 GCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGLLKKTRDERRLCIQEGHFPTNKELA 1216
            GCRF +YAYWWIRQSIRKAIFQNSRTVRLPENVF LLKK RD RRLCIQEGH P N+EL+
Sbjct: 392  GCRFSSYAYWWIRQSIRKAIFQNSRTVRLPENVFALLKKIRDARRLCIQEGHIPCNQELS 451

Query: 1217 HRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQEITADPEVEIPDLMIAKQMMRQHV 1396
              VGIRVEKLE LL N+RNP SIQERAW+DQDVT QEITADPEVE PDLMIAKQMMR+HV
Sbjct: 452  KLVGIRVEKLESLLMNSRNPLSIQERAWLDQDVTFQEITADPEVETPDLMIAKQMMREHV 511

Query: 1397 HNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMYGITKERVRQLESRALDKLKGCLSS 1576
            HNLLGVLN RERQIIKFR+GI D++PKSLS+IGAMY ++KERVRQLESRALDKLKGCLSS
Sbjct: 512  HNLLGVLNHRERQIIKFRFGIQDNKPKSLSDIGAMYDLSKERVRQLESRALDKLKGCLSS 571

Query: 1577 HGLEAYINLLI 1609
             GLEAYI++LI
Sbjct: 572  EGLEAYIDMLI 582



 Score =  174 bits (442), Expect(2) = 0.0
 Identities = 95/173 (54%), Positives = 116/173 (67%), Gaps = 6/173 (3%)
 Frame = +3

Query: 3   LMLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRIINGEKVV------KHDGVGL 164
           LMLHDQA+RP+T LP TS+ RQFP SV P E  ++Y + ++   K+V      +H   GL
Sbjct: 33  LMLHDQATRPVTFLPATSIVRQFPPSVYPQESNSNYNSCLVKEGKMVQATLDRRHAEDGL 92

Query: 165 PLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGS 344
            +CEE EKQKFD+YLKY ERRLLYQPG+   FT P SEENKYL               GS
Sbjct: 93  SICEESEKQKFDQYLKYLERRLLYQPGLCSPFTVPCSEENKYLAMSSESVNSGANILAGS 152

Query: 345 KQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQPPLLG 503
            Q LV Q + SSVQPG VLALAK+A++ASRKAA LA+KS+ILE E  +P  +G
Sbjct: 153 DQSLVLQNSLSSVQPGSVLALAKKAMLASRKAASLADKSSILESELREPYFIG 205


>ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
            guineensis]
          Length = 570

 Score =  503 bits (1295), Expect = e-169
 Identities = 251/336 (74%), Positives = 289/336 (86%), Gaps = 1/336 (0%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGL-NTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVK 781
            EVS    +++  KI+KGL N +DP RLFLWGPETKQLLTVKEEKDLF+ IQ+++RLEEV+
Sbjct: 235  EVSKLMTSDMKEKIDKGLINQNDPLRLFLWGPETKQLLTVKEEKDLFVQIQDVVRLEEVQ 294

Query: 782  QRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKG 961
            QRL++QF  EPTL+EWA A+GMSCQVLQSCL SGKRSREKMI AN RLV+HVA+QYEGKG
Sbjct: 295  QRLRLQFDREPTLSEWAKAVGMSCQVLQSCLSSGKRSREKMINANLRLVVHVAKQYEGKG 354

Query: 962  LNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFG 1141
            L++QDLLQEGSRGLMKSLEKFKPKAGCRF TYAYWWIRQSIR+AIF NSR +RLPENVFG
Sbjct: 355  LSVQDLLQEGSRGLMKSLEKFKPKAGCRFATYAYWWIRQSIRRAIFLNSRVIRLPENVFG 414

Query: 1142 LLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
            LLK+ ++ RRL IQEGH PTN+E+A RVGI VEKLE LL  TRNP SIQE  W DQDV  
Sbjct: 415  LLKRIKNARRLFIQEGHAPTNEEIAKRVGISVEKLEALLLTTRNPISIQECVWTDQDVKF 474

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QEITADP VE P+L IAKQMMRQHV  LL +L  RERQII++R+GI ++E KSL+EIGAM
Sbjct: 475  QEITADPGVETPELSIAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNEQKSLTEIGAM 534

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            +G++KERVRQLESRALDKLKGCL SHGL AY+ LL+
Sbjct: 535  FGLSKERVRQLESRALDKLKGCLPSHGLGAYLELLL 570



 Score =  110 bits (276), Expect = 9e-22
 Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRIINGEKVVKHDG----VGLPLC 173
           MLHDQAS   TS+PTT +A  FP SVL HE  +DYKT  I+ E+    D      G    
Sbjct: 30  MLHDQASWTNTSVPTTPIACHFPISVLSHEQHDDYKTNCISKEEKNVQDNQQVRSGRSCY 89

Query: 174 EEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGSKQI 353
           EE+EK +F +YL+Y +++LLY    WY F +  +EE   L                SK +
Sbjct: 90  EEKEKCEFAQYLRYSKQQLLYHQVFWYPFLSLYTEEKTPL------AMAVEPIKSDSKGV 143

Query: 354 LVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQPPLL 500
            +E   +  V+P +VLALAKRA+MASRKAA L E+SNIL  EF +   L
Sbjct: 144 QLE-NCADFVRPTEVLALAKRAMMASRKAASLMEESNILAAEFDESHFL 191


>ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Phoenix dactylifera]
          Length = 466

 Score =  499 bits (1284), Expect = e-169
 Identities = 248/335 (74%), Positives = 283/335 (84%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            EVS +    +N KI+KGL+ +DP RLFLWGPETKQLLTVKEEKDLF+ IQ+LMRLEEV+Q
Sbjct: 132  EVSKSMTTGMNKKIDKGLDPNDPLRLFLWGPETKQLLTVKEEKDLFVQIQDLMRLEEVQQ 191

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL++QF  EPTL+EWA A+GMSCQ LQ CL SGKRSREKMI AN RLV+HVA+QYEGKGL
Sbjct: 192  RLRLQFDREPTLSEWAQAVGMSCQALQCCLSSGKRSREKMINANLRLVVHVAKQYEGKGL 251

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
            NI DLLQEGSRGLMKSLEKFKPK GCRF TYAYWWIRQSIRKAIF NSR +RLPENVFGL
Sbjct: 252  NILDLLQEGSRGLMKSLEKFKPKVGCRFSTYAYWWIRQSIRKAIFLNSRVIRLPENVFGL 311

Query: 1145 LKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQ 1324
            LK  +  RRL IQEGH PTN+E+A +VGI VE+L+ LL  TRNP SIQE AW DQDVT Q
Sbjct: 312  LKSIKKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTTRNPISIQECAWTDQDVTFQ 371

Query: 1325 EITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMY 1504
            EIT DPEVE PDL +AKQMMRQHV  LL +L  RERQII++R+GI +++PKSL+EIG M+
Sbjct: 372  EITGDPEVETPDLSMAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNKPKSLTEIGVMF 431

Query: 1505 GITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            G++KERVRQLESRALDKLK C  SHGL AY+ LL+
Sbjct: 432  GLSKERVRQLESRALDKLKDCRLSHGLGAYLELLL 466


>ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Phoenix dactylifera]
          Length = 529

 Score =  499 bits (1284), Expect = e-168
 Identities = 248/335 (74%), Positives = 283/335 (84%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            EVS +    +N KI+KGL+ +DP RLFLWGPETKQLLTVKEEKDLF+ IQ+LMRLEEV+Q
Sbjct: 195  EVSKSMTTGMNKKIDKGLDPNDPLRLFLWGPETKQLLTVKEEKDLFVQIQDLMRLEEVQQ 254

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL++QF  EPTL+EWA A+GMSCQ LQ CL SGKRSREKMI AN RLV+HVA+QYEGKGL
Sbjct: 255  RLRLQFDREPTLSEWAQAVGMSCQALQCCLSSGKRSREKMINANLRLVVHVAKQYEGKGL 314

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
            NI DLLQEGSRGLMKSLEKFKPK GCRF TYAYWWIRQSIRKAIF NSR +RLPENVFGL
Sbjct: 315  NILDLLQEGSRGLMKSLEKFKPKVGCRFSTYAYWWIRQSIRKAIFLNSRVIRLPENVFGL 374

Query: 1145 LKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQ 1324
            LK  +  RRL IQEGH PTN+E+A +VGI VE+L+ LL  TRNP SIQE AW DQDVT Q
Sbjct: 375  LKSIKKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTTRNPISIQECAWTDQDVTFQ 434

Query: 1325 EITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMY 1504
            EIT DPEVE PDL +AKQMMRQHV  LL +L  RERQII++R+GI +++PKSL+EIG M+
Sbjct: 435  EITGDPEVETPDLSMAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNKPKSLTEIGVMF 494

Query: 1505 GITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            G++KERVRQLESRALDKLK C  SHGL AY+ LL+
Sbjct: 495  GLSKERVRQLESRALDKLKDCRLSHGLGAYLELLL 529



 Score = 66.6 bits (161), Expect = 1e-07
 Identities = 42/110 (38%), Positives = 59/110 (53%)
 Frame = +3

Query: 174 EEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGSKQI 353
           +E+ K +  + L+YFE +LLY    WY F +  +EE   L                  ++
Sbjct: 50  KEKAKCEVAQCLRYFEHQLLYHQVFWYPFLSLYTEEKTPLAMSTEPIK-------SDSKL 102

Query: 354 LVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQPPLLG 503
           +  +  +  V+P DVLALAKRA+ ASRKAA L E+SNIL  EF +   LG
Sbjct: 103 VPLENCADFVRPADVLALAKRAMRASRKAASLMEESNILAAEFDESHFLG 152


>ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Musa
            acuminata subsp. malaccensis]
          Length = 577

 Score =  496 bits (1278), Expect = e-166
 Identities = 248/333 (74%), Positives = 287/333 (86%)
 Frame = +2

Query: 611  SSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQRL 790
            SS TI + + KI+K L+++DP RLFLWGPETKQLLTVKEEKDLF+ I++LMRLEEVK+RL
Sbjct: 246  SSVTINQ-SKKIDKRLDSNDPLRLFLWGPETKQLLTVKEEKDLFVKIEDLMRLEEVKERL 304

Query: 791  KMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGLNI 970
            + Q   EPTLAEWA A+GMSCQ LQSCL SG+R+REKMIYANFRLV+HVARQYEGKGLNI
Sbjct: 305  QSQSDREPTLAEWAQAVGMSCQDLQSCLSSGRRNREKMIYANFRLVVHVARQYEGKGLNI 364

Query: 971  QDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGLLK 1150
            QDLLQEGSRGLMKSLEKFKP+AGCRFPTYAYWWIRQSI+KAIF+NSRT+RLPEN F  LK
Sbjct: 365  QDLLQEGSRGLMKSLEKFKPRAGCRFPTYAYWWIRQSIKKAIFKNSRTIRLPENAFARLK 424

Query: 1151 KTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQEI 1330
              R+ RRLCIQEG  PTN+E+A RVGI V+KLE LL N+R P SIQ   W+DQDVT QE 
Sbjct: 425  SIREARRLCIQEGLLPTNEEIAKRVGITVQKLEILLLNSRYPISIQRHPWLDQDVTFQET 484

Query: 1331 TADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMYGI 1510
             ADP++EIPDL+IAKQMMRQHV NLL +L  RER I+++R+GI  SE KSLSEIGAMYG+
Sbjct: 485  VADPKIEIPDLVIAKQMMRQHVRNLLNILKPRERVIVQYRFGIRCSEQKSLSEIGAMYGL 544

Query: 1511 TKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            +KERVRQLES+AL KL+ CL S GLEAY++LLI
Sbjct: 545  SKERVRQLESQALGKLRKCLQSQGLEAYLDLLI 577



 Score =  100 bits (248), Expect = 3e-18
 Identities = 65/173 (37%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRIING-EKVVKHDG------VGL 164
           ML DQAS+P+  +P T +     +SVL  E  +D KT  +N  EK V+          G 
Sbjct: 31  MLLDQASQPMIHVPATQVVHHITASVLSKEQCDDLKTNHLNKVEKSVQATPDKWLTEAGR 90

Query: 165 PLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGS 344
              EEREK +F++YL+Y E +L YQP +WY F  P  +E K                 G 
Sbjct: 91  SCSEEREKHEFNQYLRYLECQLSYQPSLWYPF--PPLDEEKQSLPVSVGPEETSTCVSGD 148

Query: 345 KQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQPPLLG 503
              +  + T   + P DVLALAK+A++AS+ AA L E+SNIL  E  +   LG
Sbjct: 149 SSAMQVENTKDCITPADVLALAKKAMIASKIAASLVEQSNILGIEVDKSNFLG 201


>ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Ananas
            comosus]
 ref|XP_020085185.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Ananas
            comosus]
          Length = 573

 Score =  484 bits (1246), Expect = e-161
 Identities = 239/335 (71%), Positives = 289/335 (86%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            EV+S    +++ KI+K L+++DP +LFL GPETKQLLT+KEEKDL + IQ+++RLE VKQ
Sbjct: 239  EVASLKSIDISKKIDKRLDSNDPLKLFLRGPETKQLLTLKEEKDLIIQIQDVIRLEGVKQ 298

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL++QFGHEPTLAEWA ++GMSCQVLQSCL SG+RSREK+IYANFRLVIHVA+QYEGKGL
Sbjct: 299  RLELQFGHEPTLAEWARSVGMSCQVLQSCLCSGRRSREKIIYANFRLVIHVAKQYEGKGL 358

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
            ++QDLLQEGSRGL+KSLEKFKP+AGCRFP+YAYWWIRQSIRKAIFQ+SRT+RLPENVFGL
Sbjct: 359  SLQDLLQEGSRGLIKSLEKFKPQAGCRFPSYAYWWIRQSIRKAIFQHSRTIRLPENVFGL 418

Query: 1145 LKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQ 1324
            L+K +  R+L IQ G+ P N+E+A  VGI  +KLE LL   RNP  I++R W DQDVT+Q
Sbjct: 419  LRKVKAARKLYIQGGYLPANEEIAKCVGITSQKLESLLLRARNPVPIRKRVWTDQDVTLQ 478

Query: 1325 EITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMY 1504
            EITADPEVEIPDL I+K MMR+HV N L +LN RER+II++R+GI D E KSL+EIG MY
Sbjct: 479  EITADPEVEIPDLNISKAMMREHVRNFLRILNPRERKIIQYRFGIHDGERKSLTEIGRMY 538

Query: 1505 GITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            G++KERVRQLESRALDKLK  L S GLEAY++LLI
Sbjct: 539  GLSKERVRQLESRALDKLKESLPSQGLEAYLHLLI 573



 Score = 96.3 bits (238), Expect = 4e-17
 Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRIINGEKVVKHD------GVGLP 167
           M+ + ASR +TS+ T+SL  + P+S+L  E  +D K   +  EKV +        G   P
Sbjct: 28  MISEHASRIVTSMTTSSLVHRLPASLLSLEQHHDRKDYYLKEEKVSQATLDKQKVGDSKP 87

Query: 168 LCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGSK 347
           LCEE E+ +F +YL+YF+R+L+ +PG+W   T  +      +                S 
Sbjct: 88  LCEENEEYEFGQYLEYFQRQLISRPGLWPQPTINKENTTSIMSKELSVHHSNSTKVAESI 147

Query: 348 QILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNIL 470
           Q+     +  S+ P  VL+LAK+A+MA+RKA LLA+KSNIL
Sbjct: 148 QL---GNSPDSLSPAVVLSLAKKAMMATRKATLLAQKSNIL 185


>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X4
            [Nelumbo nucifera]
          Length = 525

 Score =  478 bits (1231), Expect = e-160
 Identities = 232/337 (68%), Positives = 283/337 (83%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            VSE S++  ++++ KI +G +T+DP RLFLWGPETKQLLT KEE +LF+H+QEL+RLEEV
Sbjct: 189  VSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEV 248

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            KQRL+ QF  EPTL EWA A+GM+CQ LQS L SG  SREK+IYANFRLV+HVA+ Y+G+
Sbjct: 249  KQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQ 308

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLMKSLEKFKP+AGCRF TYAYWWIRQ+IRKAIFQNSRT+RLPENV+
Sbjct: 309  GLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVY 368

Query: 1139 GLLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVT 1318
             LL + +  ++L IQEGH PTN+ELA RVGI VEKLERL  +TR P SIQ+  W DQD T
Sbjct: 369  SLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTT 428

Query: 1319 IQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGA 1498
             QEITAD EVE PDL +AKQ+MR+HV NL+ +L  +ER+II+ RYGI+++EPKSL EIG+
Sbjct: 429  FQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGS 488

Query: 1499 MYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            ++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 489  IFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 525



 Score = 67.0 bits (162), Expect = 7e-08
 Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
 Frame = +3

Query: 42  LPTTSLARQFPSSVLPHEPQNDYKT--RIINGEKVVK--------HDGVGLPLCEEREKQ 191
           +PTTS+ R FP+SVL  E ++D +   +II  +K  +         D V L   EE++  
Sbjct: 1   MPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHL--YEEKKSC 58

Query: 192 KFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGSKQILVEQTT 371
           + D Y + FER+LLY PG+WYL  +    E   L                    +V Q+T
Sbjct: 59  QPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLS-------------------MVTQST 99

Query: 372 SS------SVQPGDVLALAKRAVMASRKAALLAE 455
           ++       V+P D L LAK+AV+AS++AA LA+
Sbjct: 100 AAGTVKNVDVRPCDALELAKKAVLASKQAASLAK 133


>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
            [Nelumbo nucifera]
          Length = 540

 Score =  478 bits (1231), Expect = e-159
 Identities = 232/337 (68%), Positives = 283/337 (83%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            VSE S++  ++++ KI +G +T+DP RLFLWGPETKQLLT KEE +LF+H+QEL+RLEEV
Sbjct: 204  VSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEV 263

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            KQRL+ QF  EPTL EWA A+GM+CQ LQS L SG  SREK+IYANFRLV+HVA+ Y+G+
Sbjct: 264  KQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQ 323

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLMKSLEKFKP+AGCRF TYAYWWIRQ+IRKAIFQNSRT+RLPENV+
Sbjct: 324  GLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVY 383

Query: 1139 GLLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVT 1318
             LL + +  ++L IQEGH PTN+ELA RVGI VEKLERL  +TR P SIQ+  W DQD T
Sbjct: 384  SLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTT 443

Query: 1319 IQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGA 1498
             QEITAD EVE PDL +AKQ+MR+HV NL+ +L  +ER+II+ RYGI+++EPKSL EIG+
Sbjct: 444  FQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGS 503

Query: 1499 MYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            ++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 504  IFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 540



 Score = 77.8 bits (190), Expect = 3e-11
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 16/166 (9%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYK--TRIINGEKVVK--------HDG 155
           +LH+QA+  + S+PTTS+ R FP+SVL  E ++D +   +II  +K  +         D 
Sbjct: 4   LLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDK 63

Query: 156 VGLPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXX 335
           V   L EE++  + D Y + FER+LLY PG+WYL  +    E   L              
Sbjct: 64  V--HLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLS------------- 108

Query: 336 XGSKQILVEQTTSS------SVQPGDVLALAKRAVMASRKAALLAE 455
                 +V Q+T++       V+P D L LAK+AV+AS++AA LA+
Sbjct: 109 ------MVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAK 148


>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nelumbo nucifera]
          Length = 565

 Score =  478 bits (1231), Expect = e-159
 Identities = 232/337 (68%), Positives = 283/337 (83%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            VSE S++  ++++ KI +G +T+DP RLFLWGPETKQLLT KEE +LF+H+QEL+RLEEV
Sbjct: 229  VSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEV 288

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            KQRL+ QF  EPTL EWA A+GM+CQ LQS L SG  SREK+IYANFRLV+HVA+ Y+G+
Sbjct: 289  KQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQ 348

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLMKSLEKFKP+AGCRF TYAYWWIRQ+IRKAIFQNSRT+RLPENV+
Sbjct: 349  GLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVY 408

Query: 1139 GLLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVT 1318
             LL + +  ++L IQEGH PTN+ELA RVGI VEKLERL  +TR P SIQ+  W DQD T
Sbjct: 409  SLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTT 468

Query: 1319 IQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGA 1498
             QEITAD EVE PDL +AKQ+MR+HV NL+ +L  +ER+II+ RYGI+++EPKSL EIG+
Sbjct: 469  FQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGS 528

Query: 1499 MYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            ++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 529  IFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 565



 Score = 77.8 bits (190), Expect = 3e-11
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 16/166 (9%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYK--TRIINGEKVVK--------HDG 155
           +LH+QA+  + S+PTTS+ R FP+SVL  E ++D +   +II  +K  +         D 
Sbjct: 29  LLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDK 88

Query: 156 VGLPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXX 335
           V   L EE++  + D Y + FER+LLY PG+WYL  +    E   L              
Sbjct: 89  V--HLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLS------------- 133

Query: 336 XGSKQILVEQTTSS------SVQPGDVLALAKRAVMASRKAALLAE 455
                 +V Q+T++       V+P D L LAK+AV+AS++AA LA+
Sbjct: 134 ------MVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAK 173


>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 568

 Score =  478 bits (1231), Expect = e-159
 Identities = 232/337 (68%), Positives = 283/337 (83%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            VSE S++  ++++ KI +G +T+DP RLFLWGPETKQLLT KEE +LF+H+QEL+RLEEV
Sbjct: 232  VSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEV 291

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            KQRL+ QF  EPTL EWA A+GM+CQ LQS L SG  SREK+IYANFRLV+HVA+ Y+G+
Sbjct: 292  KQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQ 351

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLMKSLEKFKP+AGCRF TYAYWWIRQ+IRKAIFQNSRT+RLPENV+
Sbjct: 352  GLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVY 411

Query: 1139 GLLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVT 1318
             LL + +  ++L IQEGH PTN+ELA RVGI VEKLERL  +TR P SIQ+  W DQD T
Sbjct: 412  SLLSQVKKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTT 471

Query: 1319 IQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGA 1498
             QEITAD EVE PDL +AKQ+MR+HV NL+ +L  +ER+II+ RYGI+++EPKSL EIG+
Sbjct: 472  FQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGS 531

Query: 1499 MYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            ++G++KERVRQLESRAL KLK CLSS GL AY +LL+
Sbjct: 532  IFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLLV 568



 Score = 77.8 bits (190), Expect = 3e-11
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 16/166 (9%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYK--TRIINGEKVVK--------HDG 155
           +LH+QA+  + S+PTTS+ R FP+SVL  E ++D +   +II  +K  +         D 
Sbjct: 32  LLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDK 91

Query: 156 VGLPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXX 335
           V   L EE++  + D Y + FER+LLY PG+WYL  +    E   L              
Sbjct: 92  V--HLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLS------------- 136

Query: 336 XGSKQILVEQTTSS------SVQPGDVLALAKRAVMASRKAALLAE 455
                 +V Q+T++       V+P D L LAK+AV+AS++AA LA+
Sbjct: 137 ------MVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAK 176


>gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 562

 Score =  449 bits (1156), Expect = e-148
 Identities = 222/334 (66%), Positives = 270/334 (80%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            E+SS    E + KI + ++ +DP  LFL G ETKQLLT KEE +LF+ +QEL+RLEEVKQ
Sbjct: 228  ELSSFRTTEKHHKINQVIDPNDPLGLFLSGSETKQLLTAKEETELFIQVQELIRLEEVKQ 287

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL+ QF  EPTL EWA A+GM+C  LQ  L SG RSREKMIY+NFR+V+HVA+ Y+GKGL
Sbjct: 288  RLQSQFDREPTLVEWAEAVGMNCGTLQLHLHSGNRSREKMIYSNFRMVVHVAKNYQGKGL 347

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
            N+QDLLQEGS+GL+KSLEKFKP+AGCRF TYAYWWIRQSIRKAIFQNSRT+RLPENV+  
Sbjct: 348  NLQDLLQEGSKGLIKSLEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYNA 407

Query: 1145 LKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTIQ 1324
            L++ +  + L I+EGH PTN+ELA RVGI VEKLE LL++TR P S+Q   W DQD T Q
Sbjct: 408  LRQVKSAKELFIKEGHQPTNEELAKRVGISVEKLESLLASTRMPLSMQRPVWSDQDTTFQ 467

Query: 1325 EITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAMY 1504
            EITAD EV  P+L + K +MR+HV NLL VL  +ER+II+ RYGI+D E KSL++IG ++
Sbjct: 468  EITADTEVATPELCVEKNLMRRHVRNLLSVLPPKERRIIRLRYGIEDGEQKSLAQIGTVF 527

Query: 1505 GITKERVRQLESRALDKLKGCLSSHGLEAYINLL 1606
            G++KERVRQLE+RALDKLK CLSSHGLEAY NLL
Sbjct: 528  GLSKERVRQLENRALDKLKKCLSSHGLEAYTNLL 561



 Score = 84.3 bits (207), Expect = 3e-13
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
 Frame = +3

Query: 6   MLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRI-INGEKVVKHD------GVGL 164
           MLH+ A+  +TS+PTTS+ R FP+SVL  E ++D ++ + I  +K  +            
Sbjct: 31  MLHELAAPAVTSVPTTSITRHFPASVLLQEQRDDIRSLLHIREDKPFEATLNRTQMDNDA 90

Query: 165 PLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXGS 344
            L +E++  + D+YLK FER+LLY PG+WYL  + +S E   L                 
Sbjct: 91  SLIQEKKDCRSDQYLKDFERQLLYWPGLWYLLPSSQSGEKPVL-------------PLSM 137

Query: 345 KQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQ 488
           + +  +       +  DVL+LAK+A++AS++A  LA +SN +  +F +
Sbjct: 138 QSMAPDADKVLQFKACDVLSLAKKALLASKQAVSLAAESNSIGHDFDE 185


>ref|XP_020676962.1| RNA polymerase sigma factor sigF, chloroplastic [Dendrobium
            catenatum]
          Length = 575

 Score =  449 bits (1155), Expect = e-148
 Identities = 223/335 (66%), Positives = 268/335 (80%)
 Frame = +2

Query: 602  SEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVK 781
            S  S AT      +I+K  + +DP RLFLWG ETK+LLT+ EEK+LF  IQ+LM ++ VK
Sbjct: 240  SVTSMATDNVKVKRIDKIFDNNDPLRLFLWGSETKKLLTIAEEKELFAQIQDLMEMDVVK 299

Query: 782  QRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKG 961
            ++L MQFG EPTL EWA A+GMS   LQ+C+ SG  SR ++IYANFRLV+H+A+QYEGKG
Sbjct: 300  EKLHMQFGREPTLIEWAEAVGMSFHDLQACISSGMHSRNRVIYANFRLVVHIAKQYEGKG 359

Query: 962  LNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFG 1141
            LNIQDLLQEGS GLMKSLEKFKPK GCRF TYAYWWIRQSIRKAIFQ+SRT+RLPENVF 
Sbjct: 360  LNIQDLLQEGSMGLMKSLEKFKPKIGCRFSTYAYWWIRQSIRKAIFQHSRTIRLPENVFA 419

Query: 1142 LLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
             LK  +D RR+C+QEG  PTN+E+A R G+ V KL  LL  +RNP SIQ   WIDQD+T 
Sbjct: 420  ELKIIKDARRICLQEGLTPTNEEVAKRAGMHVGKLVNLLKISRNPISIQGHTWIDQDITF 479

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QEITADPE+EIP+++I KQMMRQHVH+LLGVL+ RER++I+ R+GI  SEPKSL +IG M
Sbjct: 480  QEITADPEIEIPNIIIEKQMMRQHVHSLLGVLSPRERKLIRLRFGIQYSEPKSLQQIGDM 539

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLL 1606
            +GI+KERVRQLES+AL KL+ C SS GL AY  LL
Sbjct: 540  FGISKERVRQLESQALKKLRACSSSQGLGAYAELL 574



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 68/166 (40%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
 Frame = +3

Query: 9   LHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRI-INGEKVVK--------HDGVG 161
           LH Q SR I S PT S  R F +S+L  E  N Y +   I  EK  +         DG  
Sbjct: 32  LHGQVSRAIFSTPTKSADRHFNTSILTQEQHNYYSSSYGIQEEKGAQAIFDLQSLEDGS- 90

Query: 162 LPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXG 341
               +ER K  FD YLK+ ERRLLY PG+WY F    + E   +               G
Sbjct: 91  -LSSDERGKHHFDVYLKHLERRLLYDPGLWYSFLTKYNLEKAVMRTTELINNKKAGV--G 147

Query: 342 SKQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFE 479
            + +  EQ  +S+++P DVL LA+RA+MASR AALLAEKSN    E
Sbjct: 148 VELMETEQANTSTMRPEDVLELARRALMASRDAALLAEKSNSFSHE 193


>gb|PKU65607.1| RNA polymerase sigma factor sigF, chloroplastic [Dendrobium
            catenatum]
          Length = 575

 Score =  448 bits (1153), Expect = e-147
 Identities = 223/335 (66%), Positives = 267/335 (79%)
 Frame = +2

Query: 602  SEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVK 781
            S  S AT      +I+K  + +DP RLFLWG ETK+LLT+ EEK+LF  IQ+LM ++ VK
Sbjct: 240  SVTSMATDNVKVKRIDKIFDNNDPLRLFLWGSETKKLLTIAEEKELFAQIQDLMEMDVVK 299

Query: 782  QRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKG 961
            ++L MQFG EPTL EWA A+GMS   LQ+C+ SG  SR ++IYANFRLV+H+A+QYEGKG
Sbjct: 300  EKLHMQFGREPTLIEWAEAVGMSFHDLQACISSGMHSRNRVIYANFRLVVHIAKQYEGKG 359

Query: 962  LNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFG 1141
            LNIQDLLQEGS GLMKSLEKFKPK GCRF TYAYWWIRQSIRKAIFQ+SRT+RLPENVF 
Sbjct: 360  LNIQDLLQEGSMGLMKSLEKFKPKIGCRFSTYAYWWIRQSIRKAIFQHSRTIRLPENVFA 419

Query: 1142 LLKKTRDERRLCIQEGHFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
             LK  +D RR+C+QEG  PTN+E+A R G+ V KL  LL  +RNP SIQ   WIDQD+T 
Sbjct: 420  ELKIIKDARRICLQEGLTPTNEEVAKRAGMHVGKLVNLLKISRNPISIQGHTWIDQDITF 479

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QEITADPE+EIP ++I KQMMRQHVH+LLGVL+ RER++I+ R+GI  SEPKSL +IG M
Sbjct: 480  QEITADPEIEIPKIVIEKQMMRQHVHSLLGVLSPRERKLIRLRFGIQYSEPKSLQQIGDM 539

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLL 1606
            +GI+KERVRQLES+AL KL+ C SS GL AY  LL
Sbjct: 540  FGISKERVRQLESQALKKLRACSSSQGLGAYAELL 574



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 68/166 (40%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
 Frame = +3

Query: 9   LHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKTRI-INGEKVVK--------HDGVG 161
           LH Q SR I S PT S  R F +S+L  E  N Y +   I  EK  +         DG  
Sbjct: 32  LHGQVSRAIFSTPTKSADRHFNTSILTQEQHNYYSSSYGIQEEKGAQAIFDLQSLEDGS- 90

Query: 162 LPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXG 341
               +ER K  FD YLK+ ERRLLY PG+WY F    + E   +               G
Sbjct: 91  -LSSDERGKHHFDVYLKHLERRLLYDPGLWYSFLTKYNLEKAVMRTTELINNKKAGV--G 147

Query: 342 SKQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFE 479
            + +  EQ  +S+++P DVL LA+RA+MASR AALLAEKSN    E
Sbjct: 148 VELMETEQANTSTMRPEDVLELARRALMASRDAALLAEKSNSFSHE 193


>gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 422

 Score =  439 bits (1130), Expect = e-146
 Identities = 214/336 (63%), Positives = 269/336 (80%), Gaps = 1/336 (0%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            E +S T +++  KI +G N +DP RLFLWGPET+QLLT KEE +L   +Q+L +LEEVK 
Sbjct: 87   ESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKS 146

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL+ QFG EPTL EWA A+G+SCQ+L+S LRSG  SREK+IYAN R+V+H+A+QY+G+GL
Sbjct: 147  RLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGL 206

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
             +QDL+QEGS GLMKS+EKFKP+AGCRF TYAYWWIRQ++RKAIFQ+SRT+RLPENV+ L
Sbjct: 207  GLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSL 266

Query: 1145 LKKTRDERRLCIQEG-HFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
            L K  + ++ CIQEG H P  +ELA RVGI VEKLE+LL  TR P S+Q+  W DQD T 
Sbjct: 267  LGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTF 326

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QE+TAD  VEIPD+ +AKQ+MRQHV +LL +LN RER+II+ RYGI+D + +SLSEIG M
Sbjct: 327  QEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEIGGM 386

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            +G++KERVRQLESRA  KL+  L S GL AY  LL+
Sbjct: 387  FGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 422


>gb|AKC88774.1| sigma factor [Melianthus villosus]
          Length = 538

 Score =  444 bits (1141), Expect = e-146
 Identities = 212/338 (62%), Positives = 275/338 (81%), Gaps = 1/338 (0%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            V+E + +   ++  K+ +G N +DP RLFL GPETKQLLT KEE  L + IQELM+LE+V
Sbjct: 201  VNETNCSRRTDIKRKVAEGFNPNDPLRLFLGGPETKQLLTAKEESVLIVRIQELMKLEQV 260

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            + RL+ QFGHEPTL +WA A G+SC+ LQS + SGK+SR+K+IYAN R+V+H+A+QY G+
Sbjct: 261  RNRLQCQFGHEPTLIKWAEAAGLSCRALQSQINSGKKSRDKLIYANLRMVVHIAKQYLGR 320

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GL+ QDL QEGS GLM S+EKFKP+AGCRF TYAYWWIRQS+RKAIFQ+SRT+RLPENV+
Sbjct: 321  GLSFQDLQQEGSMGLMISVEKFKPQAGCRFGTYAYWWIRQSVRKAIFQHSRTIRLPENVY 380

Query: 1139 GLLKKTRDERRLCIQEG-HFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDV 1315
            GLL K  + +RL IQEG H PT +++A R+GI V+KLERLL+ TR P SIQ+  W DQ+ 
Sbjct: 381  GLLAKVLEAKRLYIQEGNHHPTKEDIAGRIGITVDKLERLLATTRMPLSIQQPVWADQNT 440

Query: 1316 TIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIG 1495
            T QE+TAD  VEIPD+ + KQ+MR+H+  LLG+L+ +ER+II+ R+GI+D E KSLSEIG
Sbjct: 441  TFQEVTADTAVEIPDISVGKQLMRKHMRGLLGILSSKERRIIRLRFGIEDGEQKSLSEIG 500

Query: 1496 AMYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            A++G++KERVRQLESRAL +LK CLSS GLEAY+N+L+
Sbjct: 501  AIFGLSKERVRQLESRALHRLKQCLSSQGLEAYVNMLV 538


>emb|CBI32760.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  443 bits (1140), Expect = e-146
 Identities = 214/338 (63%), Positives = 271/338 (80%), Gaps = 1/338 (0%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            V E   +  AE+  KI +G +  DP RLFLWGPET++LLT KEE +L + IQELMRLEEV
Sbjct: 224  VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEV 283

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            K+RL+     EPT+ EWA A+G+SCQVLQS L SG RSR+K+IYAN R+V+H+A+QY+G+
Sbjct: 284  KKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGR 343

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLM S+EKFKP AGCRF +YAYWWIRQ++RKAIFQ+SRT+RLPEN++
Sbjct: 344  GLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMY 403

Query: 1139 GLLKKTRDERRLCIQEGHF-PTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDV 1315
             LL K ++ +RL IQEGH  PT +E+A RVGI +EKL+RLL +TR P S+Q+  W DQD 
Sbjct: 404  SLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDT 463

Query: 1316 TIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIG 1495
            T QE+TAD  +EIPD+ +AKQ+MRQHV NLL VL  +ER+II+ R+GI D  P++LSEIG
Sbjct: 464  TFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIG 523

Query: 1496 AMYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
             ++G +KERVRQLE RAL KLK CLSSHGLE+Y +LL+
Sbjct: 524  LVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561



 Score = 80.9 bits (198), Expect = 3e-12
 Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
 Frame = +3

Query: 3   LMLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKT--RIINGEKVV-----KHDGVG 161
           LMLHDQ +  + S+PTT +AR+FP+SVL  E +++Y+   + +  E+       K     
Sbjct: 28  LMLHDQVAPAVASIPTT-IARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEI 86

Query: 162 LPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXG 341
           +   +E      ++Y+  FER+LL QPG+WY   + ++ E                    
Sbjct: 87  VVSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIM----------- 135

Query: 342 SKQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNIL--EFEFGQPPLLGKL 509
            K I  +   S  V+P DVLALAK+A+ AS++A  L E + +L  + E    P LG +
Sbjct: 136 -KSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAI 192


>ref|XP_019077288.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Vitis vinifera]
          Length = 566

 Score =  443 bits (1140), Expect = e-145
 Identities = 214/338 (63%), Positives = 271/338 (80%), Gaps = 1/338 (0%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            V E   +  AE+  KI +G +  DP RLFLWGPET++LLT KEE +L + IQELMRLEEV
Sbjct: 229  VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEV 288

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            K+RL+     EPT+ EWA A+G+SCQVLQS L SG RSR+K+IYAN R+V+H+A+QY+G+
Sbjct: 289  KKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGR 348

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLM S+EKFKP AGCRF +YAYWWIRQ++RKAIFQ+SRT+RLPEN++
Sbjct: 349  GLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMY 408

Query: 1139 GLLKKTRDERRLCIQEGHF-PTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDV 1315
             LL K ++ +RL IQEGH  PT +E+A RVGI +EKL+RLL +TR P S+Q+  W DQD 
Sbjct: 409  SLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDT 468

Query: 1316 TIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIG 1495
            T QE+TAD  +EIPD+ +AKQ+MRQHV NLL VL  +ER+II+ R+GI D  P++LSEIG
Sbjct: 469  TFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIG 528

Query: 1496 AMYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
             ++G +KERVRQLE RAL KLK CLSSHGLE+Y +LL+
Sbjct: 529  LVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 566



 Score = 79.7 bits (195), Expect = 8e-12
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
 Frame = +3

Query: 3   LMLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKT--RIINGEKVV-----KHDGVG 161
           LMLHDQ +  + S+PTT +AR+FP+SVL  E +++Y+   + +  E+       K     
Sbjct: 34  LMLHDQVAPAVASIPTT-IARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEI 92

Query: 162 LPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXG 341
           +   +E      ++Y+  FER+LL QPG+WY   + ++ E                    
Sbjct: 93  VVSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIM----------- 141

Query: 342 SKQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNILEFEFGQPP 494
            K I  +   S  V+P DVLALAK+A+ AS++A  L E + +L  +    P
Sbjct: 142 -KSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSP 191


>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Vitis vinifera]
          Length = 567

 Score =  443 bits (1140), Expect = e-145
 Identities = 214/338 (63%), Positives = 271/338 (80%), Gaps = 1/338 (0%)
 Frame = +2

Query: 599  VSEVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEV 778
            V E   +  AE+  KI +G +  DP RLFLWGPET++LLT KEE +L + IQELMRLEEV
Sbjct: 230  VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEV 289

Query: 779  KQRLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGK 958
            K+RL+     EPT+ EWA A+G+SCQVLQS L SG RSR+K+IYAN R+V+H+A+QY+G+
Sbjct: 290  KKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGR 349

Query: 959  GLNIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVF 1138
            GLN+QDLLQEGS GLM S+EKFKP AGCRF +YAYWWIRQ++RKAIFQ+SRT+RLPEN++
Sbjct: 350  GLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMY 409

Query: 1139 GLLKKTRDERRLCIQEGHF-PTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDV 1315
             LL K ++ +RL IQEGH  PT +E+A RVGI +EKL+RLL +TR P S+Q+  W DQD 
Sbjct: 410  SLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDT 469

Query: 1316 TIQEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIG 1495
            T QE+TAD  +EIPD+ +AKQ+MRQHV NLL VL  +ER+II+ R+GI D  P++LSEIG
Sbjct: 470  TFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIG 529

Query: 1496 AMYGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
             ++G +KERVRQLE RAL KLK CLSSHGLE+Y +LL+
Sbjct: 530  LVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 567



 Score = 80.9 bits (198), Expect = 3e-12
 Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
 Frame = +3

Query: 3   LMLHDQASRPITSLPTTSLARQFPSSVLPHEPQNDYKT--RIINGEKVV-----KHDGVG 161
           LMLHDQ +  + S+PTT +AR+FP+SVL  E +++Y+   + +  E+       K     
Sbjct: 34  LMLHDQVAPAVASIPTT-IARKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEI 92

Query: 162 LPLCEEREKQKFDEYLKYFERRLLYQPGVWYLFTAPRSEENKYLXXXXXXXXXXXXXXXG 341
           +   +E      ++Y+  FER+LL QPG+WY   + ++ E                    
Sbjct: 93  VVSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIM----------- 141

Query: 342 SKQILVEQTTSSSVQPGDVLALAKRAVMASRKAALLAEKSNIL--EFEFGQPPLLGKL 509
            K I  +   S  V+P DVLALAK+A+ AS++A  L E + +L  + E    P LG +
Sbjct: 142 -KSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAI 198


>ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Prunus
            avium]
          Length = 539

 Score =  441 bits (1135), Expect = e-145
 Identities = 215/336 (63%), Positives = 270/336 (80%), Gaps = 1/336 (0%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            E +S T +++  KI +G N +DP RLFLWGPET+QLLT KEE +L   +Q+L +LEEVK 
Sbjct: 204  ESNSFTSSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKT 263

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL+ QFG EPTL EWA A+G+SCQ+L+S LRSG  SREK+IYAN R+V+H+A+QY+G+GL
Sbjct: 264  RLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGL 323

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
             +QDL+QEGS GLMKS+EKFKP+AGCRF TYAYWWIRQ++RKAIFQ+SRT+RLPENV+ L
Sbjct: 324  GLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSL 383

Query: 1145 LKKTRDERRLCIQEG-HFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
            L K  + ++ CIQEG H P+ +ELA RVGI VEKLE+LL  TR P S+Q+  W DQD T 
Sbjct: 384  LGKVLEAKKSCIQEGNHNPSKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTF 443

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QE+TAD  VEIPD+ +AKQ+MRQHV +LL +LN RERQII+ RYGI+D + +SLSEIG M
Sbjct: 444  QEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLRERQIIRLRYGIEDGKQRSLSEIGGM 503

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            +G++KERVRQLESRA  KL+  L S GL AY  LL+
Sbjct: 504  FGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 539


>ref|XP_021827462.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Prunus
            avium]
          Length = 573

 Score =  441 bits (1135), Expect = e-145
 Identities = 215/336 (63%), Positives = 270/336 (80%), Gaps = 1/336 (0%)
 Frame = +2

Query: 605  EVSSATIAELNTKIEKGLNTDDPFRLFLWGPETKQLLTVKEEKDLFLHIQELMRLEEVKQ 784
            E +S T +++  KI +G N +DP RLFLWGPET+QLLT KEE +L   +Q+L +LEEVK 
Sbjct: 238  ESNSFTSSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKT 297

Query: 785  RLKMQFGHEPTLAEWAGALGMSCQVLQSCLRSGKRSREKMIYANFRLVIHVARQYEGKGL 964
            RL+ QFG EPTL EWA A+G+SCQ+L+S LRSG  SREK+IYAN R+V+H+A+QY+G+GL
Sbjct: 298  RLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGL 357

Query: 965  NIQDLLQEGSRGLMKSLEKFKPKAGCRFPTYAYWWIRQSIRKAIFQNSRTVRLPENVFGL 1144
             +QDL+QEGS GLMKS+EKFKP+AGCRF TYAYWWIRQ++RKAIFQ+SRT+RLPENV+ L
Sbjct: 358  GLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSL 417

Query: 1145 LKKTRDERRLCIQEG-HFPTNKELAHRVGIRVEKLERLLSNTRNPRSIQERAWIDQDVTI 1321
            L K  + ++ CIQEG H P+ +ELA RVGI VEKLE+LL  TR P S+Q+  W DQD T 
Sbjct: 418  LGKVLEAKKSCIQEGNHNPSKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTF 477

Query: 1322 QEITADPEVEIPDLMIAKQMMRQHVHNLLGVLNRRERQIIKFRYGIDDSEPKSLSEIGAM 1501
            QE+TAD  VEIPD+ +AKQ+MRQHV +LL +LN RERQII+ RYGI+D + +SLSEIG M
Sbjct: 478  QEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLRERQIIRLRYGIEDGKQRSLSEIGGM 537

Query: 1502 YGITKERVRQLESRALDKLKGCLSSHGLEAYINLLI 1609
            +G++KERVRQLESRA  KL+  L S GL AY  LL+
Sbjct: 538  FGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 573